organic compounds
13-(N,N-Dimethylamino)micheliolide 0.08-hydrate
aDept. of Pharm. Sciences, College of Pharmacy, University of Arkansas for Medical Sciences, Little Rock, AR 72205, USA, and bDept. of Chemistry, University of Kentucky, Lexington KY 40506, USA
*Correspondence e-mail: pacrooks@uams.edu
The title compound, C17H27NO3·0.08H2O {sytematic name: (3R,3aS,9R,9aS,9bS)-3-[(dimethylamino)methyl]-9-hydroxy-6,9-dimethyl-3,3a,4,5,7,8,9,9a-octahydroazuleno[4,5-b]furan-2(9bH)-one 0.08-hydrate}, exhibits intramolecular O—H⋯O hydrogen bonding to form a ring of graph-set motif S(6). As well as this intramolecular hydrogen bond with the lactone-ring O atom, the hydroxy H atom forms an O—H⋯O hydrogen bond to the low-occupancy partial water molecule [occupancy = 0.078 (2)]. The water molecule is correlated with disorder of the N(CH3)2 group [major–minor occupancy factors are 0.922 (2):0.078 (2)]. The dihedral angle between the mean planes of the trans-fused seven-membered ring and the lactone ring is 4.42 (9)°.
CCDC reference: 970424
Related literature
For the biological activity of 13-N,N-dimethylamino micheliolide, see: Rodriguez et al. (1976); Sethi et al. (1984); Acosta & Fixher (1993); Zhang et al. (2012). For the of a similar molecule, see: Acosta et al. (1991). The structure was checked with PLATON (Spek, 2009) and with an R-tensor (Parkin, 2000).
Experimental
Crystal data
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Data collection: APEX2 (Bruker, 2006); cell SAINT (Bruker, 2006); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008b); program(s) used to refine structure: SHELXL2013 (Sheldrick, 2008b); molecular graphics: XP in SHELXTL (Sheldrick, 2008b); software used to prepare material for publication: SHELXL2013.
Supporting information
CCDC reference: 970424
10.1107/S1600536813030304/sj5365sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536813030304/sj5365Isup2.hkl
The title compound was prepared by the reported literature procedure (Zhang et al., 2012) and recrystallization from hexanes gave colorless needles suitable for X-ray analysis.
H atoms were found in difference Fourier maps and subsequently placed at idealized positions with constrained distances of 0.98 Å (RCH3), 0.99 Å (R2CH2), 1.00 Å (R3CH) and 0.84 Å (OH). Partial occupancy water H atoms were fixed due to the low occupancy.
Uiso(H) values were set to either 1.2Ueq or 1.5Ueq (RCH3, OH) of the attached atom. To ensure satisfactory
of disordered groups in the structure, a combination of constraints and restraints were employed. The constraints (SHELXL commands EADP) were used to fix parameters of superimposed or partially overlapping fragments. Restraints (SHELXL commands SAME, SADI, DFIX and RIGU) were used to maintain the integrity of ill-defined or disordered groups.Data collection: APEX2 (Bruker, 2006); cell
SAINT (Bruker, 2006); data reduction: SAINT (Bruker, 2006); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008b); program(s) used to refine structure: SHELXL2013 (Sheldrick, 2008b); molecular graphics: XP in SHELXTL (Sheldrick, 2008b); software used to prepare material for publication: SHELXL2013 (Sheldrick, 2008b).Fig. 1. A view of the molecule with displacement ellipsoids drawn at the 50% probability level. |
C17H27NO3·0.08H2O | Dx = 1.220 Mg m−3 |
Mr = 295.01 | Cu Kα radiation, λ = 1.54178 Å |
Orthorhombic, P212121 | Cell parameters from 9518 reflections |
a = 9.1329 (2) Å | θ = 5.3–68.3° |
b = 10.5227 (2) Å | µ = 0.66 mm−1 |
c = 16.7194 (3) Å | T = 90 K |
V = 1606.78 (5) Å3 | Block, colourless |
Z = 4 | 0.18 × 0.16 × 0.12 mm |
F(000) = 644 |
Bruker X8 Proteum diffractometer | 2925 independent reflections |
Radiation source: fine-focus rotating anode | 2908 reflections with I > 2σ(I) |
Detector resolution: 5.6 pixels mm-1 | Rint = 0.032 |
ϕ and ω scans | θmax = 68.3°, θmin = 5.3° |
Absorption correction: multi-scan (SADABS; Sheldrick, 2008a) | h = −10→8 |
Tmin = 0.854, Tmax = 0.942 | k = −12→12 |
20070 measured reflections | l = −16→20 |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: mixed |
R[F2 > 2σ(F2)] = 0.025 | H-atom parameters constrained |
wR(F2) = 0.067 | w = 1/[σ2(Fo2) + (0.0378P)2 + 0.270P] where P = (Fo2 + 2Fc2)/3 |
S = 1.07 | (Δ/σ)max < 0.001 |
2925 reflections | Δρmax = 0.18 e Å−3 |
211 parameters | Δρmin = −0.13 e Å−3 |
41 restraints | Absolute structure: Flack parameter determined using 1227 quotients [(I+)-(I-)]/[(I+)+(I-)] (Parsons et al., 2013) |
Primary atom site location: structure-invariant direct methods | Absolute structure parameter: −0.01 (3) |
C17H27NO3·0.08H2O | V = 1606.78 (5) Å3 |
Mr = 295.01 | Z = 4 |
Orthorhombic, P212121 | Cu Kα radiation |
a = 9.1329 (2) Å | µ = 0.66 mm−1 |
b = 10.5227 (2) Å | T = 90 K |
c = 16.7194 (3) Å | 0.18 × 0.16 × 0.12 mm |
Bruker X8 Proteum diffractometer | 2925 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 2008a) | 2908 reflections with I > 2σ(I) |
Tmin = 0.854, Tmax = 0.942 | Rint = 0.032 |
20070 measured reflections |
R[F2 > 2σ(F2)] = 0.025 | H-atom parameters constrained |
wR(F2) = 0.067 | Δρmax = 0.18 e Å−3 |
S = 1.07 | Δρmin = −0.13 e Å−3 |
2925 reflections | Absolute structure: Flack parameter determined using 1227 quotients [(I+)-(I-)]/[(I+)+(I-)] (Parsons et al., 2013) |
211 parameters | Absolute structure parameter: −0.01 (3) |
41 restraints |
Experimental. The crystal was mounted with polyisobutene oil on the tip of a fine glass fibre, fastened in a copper mounting pin with electrical solder. It was placed directly into the cold stream of a liquid nitrogen based cryostat, according to published methods (Hope, 1994; Parkin & Hope, 1998). Diffraction data were collected with the crystal at 90 K, which is standard practice in this laboratory for the majority of flash-cooled crystals. |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement progress was checked using PLATON (Spek, 2009) and by an R-tensor (Parkin, 2000). The final model was further checked with the IUCr utility checkCIF. The partial occupancy water molecule was modelled on the site of a difference map peak of approximately 0.67 e A-3. It must have the same or smaller occupancy as the minor disorder component of disorder in the main molecule, which is a very small amount (less than 8%). Nevertheless, it gave a noticeably better fit, and a much flatter difference map, and so was retained. Hydrogen atoms for this water were placed so as to make reasonable H-bonds to nearby acceptors. Overall, the fit is good and the absolute configuration is well established. |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
O1 | 0.26340 (11) | 0.40697 (10) | 0.53330 (6) | 0.0210 (2) | |
O2 | 0.43064 (11) | 0.29124 (9) | 0.59801 (6) | 0.0165 (2) | |
O3 | 0.42055 (12) | 0.12939 (12) | 0.74254 (7) | 0.0265 (3) | |
H3 | 0.3662 | 0.1672 | 0.7098 | 0.040* | |
C1 | 0.80039 (15) | 0.21088 (14) | 0.69190 (8) | 0.0163 (3) | |
C2 | 0.81758 (16) | 0.08807 (15) | 0.73919 (9) | 0.0214 (3) | |
H2A | 0.8888 | 0.0991 | 0.7833 | 0.026* | |
H2B | 0.8513 | 0.0182 | 0.7041 | 0.026* | |
C3 | 0.66481 (17) | 0.06029 (15) | 0.77202 (9) | 0.0213 (3) | |
H3A | 0.6507 | −0.0320 | 0.7804 | 0.026* | |
H3B | 0.6485 | 0.1051 | 0.8233 | 0.026* | |
C4 | 0.56222 (16) | 0.11003 (14) | 0.70741 (8) | 0.0188 (3) | |
C5 | 0.63616 (15) | 0.23752 (13) | 0.68365 (8) | 0.0159 (3) | |
H5 | 0.6086 | 0.3030 | 0.7243 | 0.019* | |
C6 | 0.59247 (14) | 0.28641 (14) | 0.60217 (8) | 0.0147 (3) | |
H6 | 0.6297 | 0.2268 | 0.5603 | 0.018* | |
C7 | 0.63770 (16) | 0.42119 (13) | 0.58082 (8) | 0.0160 (3) | |
H7 | 0.6194 | 0.4773 | 0.6280 | 0.019* | |
C8 | 0.79855 (16) | 0.43052 (14) | 0.55809 (9) | 0.0176 (3) | |
H8A | 0.8169 | 0.5145 | 0.5333 | 0.021* | |
H8B | 0.8211 | 0.3645 | 0.5177 | 0.021* | |
C9 | 0.90109 (16) | 0.41382 (15) | 0.62982 (9) | 0.0209 (3) | |
H9A | 1.0007 | 0.4391 | 0.6127 | 0.025* | |
H9B | 0.8700 | 0.4747 | 0.6717 | 0.025* | |
C10 | 0.91239 (16) | 0.28324 (14) | 0.66846 (8) | 0.0180 (3) | |
C11 | 0.52508 (16) | 0.45244 (14) | 0.51589 (8) | 0.0169 (3) | |
H11 | 0.5560 | 0.4102 | 0.4650 | 0.020* | |
C12 | 0.39005 (16) | 0.38521 (14) | 0.54730 (8) | 0.0166 (3) | |
C14 | 1.06853 (17) | 0.24418 (15) | 0.68593 (9) | 0.0220 (3) | |
H14A | 1.1085 | 0.2982 | 0.7284 | 0.033* | |
H14B | 1.1278 | 0.2538 | 0.6375 | 0.033* | |
H14C | 1.0704 | 0.1552 | 0.7033 | 0.033* | |
C15 | 0.55145 (18) | 0.01621 (14) | 0.63836 (9) | 0.0233 (3) | |
H15A | 0.5178 | −0.0662 | 0.6585 | 0.035* | |
H15B | 0.6479 | 0.0062 | 0.6135 | 0.035* | |
H15C | 0.4817 | 0.0482 | 0.5986 | 0.035* | |
C13 | 0.4909 (2) | 0.5914 (2) | 0.4980 (2) | 0.0186 (5) | 0.922 (2) |
H13A | 0.4089 | 0.5954 | 0.4593 | 0.022* | 0.922 (2) |
H13B | 0.4583 | 0.6334 | 0.5479 | 0.022* | 0.922 (2) |
N1 | 0.61597 (15) | 0.66157 (13) | 0.46532 (8) | 0.0194 (3) | 0.922 (2) |
C16 | 0.6579 (2) | 0.6162 (2) | 0.38513 (11) | 0.0255 (5) | 0.922 (2) |
H16A | 0.6873 | 0.5268 | 0.3883 | 0.038* | 0.922 (2) |
H16B | 0.7399 | 0.6671 | 0.3650 | 0.038* | 0.922 (2) |
H16C | 0.5743 | 0.6246 | 0.3488 | 0.038* | 0.922 (2) |
C17 | 0.5765 (2) | 0.79590 (17) | 0.46031 (11) | 0.0294 (4) | 0.922 (2) |
H17A | 0.4966 | 0.8067 | 0.4218 | 0.044* | 0.922 (2) |
H17B | 0.6617 | 0.8452 | 0.4428 | 0.044* | 0.922 (2) |
H17C | 0.5447 | 0.8259 | 0.5130 | 0.044* | 0.922 (2) |
C13' | 0.523 (4) | 0.596 (3) | 0.494 (3) | 0.0186 (5) | 0.078 (2) |
H13C | 0.4480 | 0.6372 | 0.5271 | 0.022* | 0.078 (2) |
H13D | 0.6191 | 0.6318 | 0.5094 | 0.022* | 0.078 (2) |
N1' | 0.4995 (18) | 0.6291 (14) | 0.4203 (9) | 0.0194 (3) | 0.078 (2) |
C16' | 0.656 (3) | 0.630 (4) | 0.408 (2) | 0.0255 (5) | 0.078 (2) |
H16D | 0.6789 | 0.6777 | 0.3587 | 0.038* | 0.078 (2) |
H16E | 0.6917 | 0.5425 | 0.4020 | 0.038* | 0.078 (2) |
H16F | 0.7047 | 0.6703 | 0.4533 | 0.038* | 0.078 (2) |
C17' | 0.439 (3) | 0.7572 (17) | 0.4127 (14) | 0.0294 (4) | 0.078 (2) |
H17D | 0.4467 | 0.7851 | 0.3569 | 0.044* | 0.078 (2) |
H17E | 0.4948 | 0.8155 | 0.4470 | 0.044* | 0.078 (2) |
H17F | 0.3364 | 0.7569 | 0.4292 | 0.044* | 0.078 (2) |
O1W | 0.2432 (13) | 0.7614 (11) | 0.3700 (7) | 0.014 (3)* | 0.078 (2) |
H1W1 | 0.1696 | 0.7606 | 0.3398 | 0.022* | 0.078 (2) |
H2W1 | 0.2082 | 0.7455 | 0.4153 | 0.022* | 0.078 (2) |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.0166 (5) | 0.0232 (5) | 0.0233 (5) | 0.0005 (4) | −0.0031 (4) | 0.0017 (4) |
O2 | 0.0131 (5) | 0.0184 (5) | 0.0179 (5) | −0.0009 (4) | −0.0010 (4) | 0.0031 (4) |
O3 | 0.0163 (5) | 0.0348 (6) | 0.0284 (6) | 0.0003 (5) | 0.0050 (5) | 0.0113 (5) |
C1 | 0.0156 (7) | 0.0191 (7) | 0.0143 (6) | 0.0009 (6) | −0.0018 (5) | −0.0010 (6) |
C2 | 0.0178 (7) | 0.0245 (7) | 0.0219 (7) | 0.0011 (6) | −0.0012 (6) | 0.0042 (6) |
C3 | 0.0212 (8) | 0.0231 (8) | 0.0197 (7) | −0.0008 (6) | −0.0002 (6) | 0.0056 (6) |
C4 | 0.0155 (7) | 0.0234 (7) | 0.0176 (7) | −0.0016 (6) | 0.0013 (6) | 0.0051 (6) |
C5 | 0.0151 (7) | 0.0174 (7) | 0.0152 (6) | −0.0008 (5) | 0.0008 (5) | −0.0002 (5) |
C6 | 0.0109 (6) | 0.0171 (6) | 0.0162 (6) | −0.0005 (5) | 0.0003 (5) | −0.0008 (5) |
C7 | 0.0162 (7) | 0.0155 (7) | 0.0162 (6) | −0.0001 (5) | 0.0005 (6) | −0.0011 (5) |
C8 | 0.0170 (7) | 0.0151 (7) | 0.0207 (7) | −0.0014 (5) | 0.0015 (6) | 0.0018 (5) |
C9 | 0.0149 (7) | 0.0196 (7) | 0.0283 (8) | −0.0038 (6) | −0.0010 (6) | 0.0000 (6) |
C10 | 0.0161 (7) | 0.0196 (7) | 0.0181 (6) | 0.0001 (6) | −0.0012 (6) | −0.0036 (6) |
C11 | 0.0173 (7) | 0.0169 (7) | 0.0166 (6) | 0.0004 (5) | 0.0005 (5) | −0.0001 (5) |
C12 | 0.0189 (7) | 0.0166 (7) | 0.0143 (6) | 0.0006 (5) | −0.0006 (5) | −0.0019 (5) |
C14 | 0.0172 (7) | 0.0224 (7) | 0.0266 (7) | −0.0007 (6) | −0.0018 (6) | −0.0001 (6) |
C15 | 0.0261 (8) | 0.0198 (7) | 0.0240 (7) | −0.0063 (6) | −0.0033 (6) | 0.0044 (6) |
C13 | 0.0156 (14) | 0.0200 (8) | 0.0204 (8) | 0.0008 (8) | 0.0040 (11) | 0.0033 (6) |
N1 | 0.0209 (7) | 0.0168 (7) | 0.0205 (7) | −0.0012 (5) | 0.0002 (5) | 0.0032 (5) |
C16 | 0.0328 (8) | 0.0234 (10) | 0.0202 (13) | 0.0006 (7) | 0.0104 (8) | 0.0018 (10) |
C17 | 0.0363 (10) | 0.0179 (8) | 0.0340 (9) | −0.0005 (8) | 0.0027 (8) | 0.0020 (7) |
C13' | 0.0156 (14) | 0.0200 (8) | 0.0204 (8) | 0.0008 (8) | 0.0040 (11) | 0.0033 (6) |
N1' | 0.0209 (7) | 0.0168 (7) | 0.0205 (7) | −0.0012 (5) | 0.0002 (5) | 0.0032 (5) |
C16' | 0.0328 (8) | 0.0234 (10) | 0.0202 (13) | 0.0006 (7) | 0.0104 (8) | 0.0018 (10) |
C17' | 0.0363 (10) | 0.0179 (8) | 0.0340 (9) | −0.0005 (8) | 0.0027 (8) | 0.0020 (7) |
O1—C12 | 1.2021 (18) | C11—H11 | 1.0000 |
O2—C12 | 1.3542 (17) | C14—H14A | 0.9800 |
O2—C6 | 1.4804 (15) | C14—H14B | 0.9800 |
O3—C4 | 1.4355 (18) | C14—H14C | 0.9800 |
O3—H3 | 0.8400 | C15—H15A | 0.9800 |
C1—C10 | 1.334 (2) | C15—H15B | 0.9800 |
C1—C2 | 1.523 (2) | C15—H15C | 0.9800 |
C1—C5 | 1.5321 (18) | C13—N1 | 1.466 (2) |
C2—C3 | 1.528 (2) | C13—H13A | 0.9900 |
C2—H2A | 0.9900 | C13—H13B | 0.9900 |
C2—H2B | 0.9900 | N1—C17 | 1.461 (2) |
C3—C4 | 1.523 (2) | N1—C16 | 1.474 (2) |
C3—H3A | 0.9900 | C16—H16A | 0.9800 |
C3—H3B | 0.9900 | C16—H16B | 0.9800 |
C4—C15 | 1.522 (2) | C16—H16C | 0.9800 |
C4—C5 | 1.5536 (19) | C17—H17A | 0.9800 |
C5—C6 | 1.5098 (18) | C17—H17B | 0.9800 |
C5—H5 | 1.0000 | C17—H17C | 0.9800 |
C6—C7 | 1.5198 (19) | C13'—N1' | 1.29 (5) |
C6—H6 | 1.0000 | C13'—C16' | 1.92 (5) |
C7—C8 | 1.5206 (19) | C13'—H13C | 0.9900 |
C7—C11 | 1.531 (2) | C13'—H13D | 0.9900 |
C7—H7 | 1.0000 | N1'—C16' | 1.45 (2) |
C8—C9 | 1.532 (2) | N1'—C17' | 1.460 (19) |
C8—H8A | 0.9900 | C16'—H16D | 0.9800 |
C8—H8B | 0.9900 | C16'—H16E | 0.9800 |
C9—C10 | 1.522 (2) | C16'—H16F | 0.9800 |
C9—H9A | 0.9900 | C17'—O1W | 1.93 (3) |
C9—H9B | 0.9900 | C17'—H17D | 0.9800 |
C10—C14 | 1.513 (2) | C17'—H17E | 0.9800 |
C11—C12 | 1.516 (2) | C17'—H17F | 0.9800 |
C11—C13 | 1.525 (3) | O1W—H1W1 | 0.8400 |
C11—C13' | 1.55 (2) | O1W—H2W1 | 0.8400 |
C12—O2—C6 | 109.14 (11) | C10—C14—H14B | 109.5 |
C4—O3—H3 | 109.5 | H14A—C14—H14B | 109.5 |
C10—C1—C2 | 123.90 (13) | C10—C14—H14C | 109.5 |
C10—C1—C5 | 128.30 (14) | H14A—C14—H14C | 109.5 |
C2—C1—C5 | 107.63 (12) | H14B—C14—H14C | 109.5 |
C1—C2—C3 | 104.76 (12) | C4—C15—H15A | 109.5 |
C1—C2—H2A | 110.8 | C4—C15—H15B | 109.5 |
C3—C2—H2A | 110.8 | H15A—C15—H15B | 109.5 |
C1—C2—H2B | 110.8 | C4—C15—H15C | 109.5 |
C3—C2—H2B | 110.8 | H15A—C15—H15C | 109.5 |
H2A—C2—H2B | 108.9 | H15B—C15—H15C | 109.5 |
C4—C3—C2 | 103.97 (11) | N1—C13—C11 | 113.35 (14) |
C4—C3—H3A | 111.0 | N1—C13—H13A | 108.9 |
C2—C3—H3A | 111.0 | C11—C13—H13A | 108.9 |
C4—C3—H3B | 111.0 | N1—C13—H13B | 108.9 |
C2—C3—H3B | 111.0 | C11—C13—H13B | 108.9 |
H3A—C3—H3B | 109.0 | H13A—C13—H13B | 107.7 |
O3—C4—C15 | 110.13 (12) | C17—N1—C13 | 108.44 (15) |
O3—C4—C3 | 108.25 (11) | C17—N1—C16 | 108.97 (15) |
C15—C4—C3 | 110.78 (13) | C13—N1—C16 | 112.23 (18) |
O3—C4—C5 | 111.95 (12) | N1—C16—H16A | 109.5 |
C15—C4—C5 | 113.22 (11) | N1—C16—H16B | 109.5 |
C3—C4—C5 | 102.16 (12) | H16A—C16—H16B | 109.5 |
C6—C5—C1 | 113.72 (11) | N1—C16—H16C | 109.5 |
C6—C5—C4 | 114.20 (12) | H16A—C16—H16C | 109.5 |
C1—C5—C4 | 104.15 (12) | H16B—C16—H16C | 109.5 |
C6—C5—H5 | 108.2 | N1—C17—H17A | 109.5 |
C1—C5—H5 | 108.2 | N1—C17—H17B | 109.5 |
C4—C5—H5 | 108.2 | H17A—C17—H17B | 109.5 |
O2—C6—C5 | 108.54 (10) | N1—C17—H17C | 109.5 |
O2—C6—C7 | 103.19 (11) | H17A—C17—H17C | 109.5 |
C5—C6—C7 | 117.26 (12) | H17B—C17—H17C | 109.5 |
O2—C6—H6 | 109.2 | N1'—C13'—C11 | 120 (3) |
C5—C6—H6 | 109.2 | N1'—C13'—C16' | 49.1 (17) |
C7—C6—H6 | 109.2 | C11—C13'—C16' | 111 (3) |
C6—C7—C8 | 112.43 (12) | N1'—C13'—H13C | 107.4 |
C6—C7—C11 | 100.62 (11) | C11—C13'—H13C | 107.4 |
C8—C7—C11 | 117.25 (12) | C16'—C13'—H13C | 141.5 |
C6—C7—H7 | 108.7 | N1'—C13'—H13D | 107.4 |
C8—C7—H7 | 108.7 | C11—C13'—H13D | 107.4 |
C11—C7—H7 | 108.7 | C16'—C13'—H13D | 64.5 |
C7—C8—C9 | 112.81 (12) | H13C—C13'—H13D | 106.9 |
C7—C8—H8A | 109.0 | C13'—N1'—C16' | 89 (2) |
C9—C8—H8A | 109.0 | C13'—N1'—C17' | 113 (2) |
C7—C8—H8B | 109.0 | C16'—N1'—C17' | 111 (2) |
C9—C8—H8B | 109.0 | N1'—C16'—C13' | 42.4 (17) |
H8A—C8—H8B | 107.8 | N1'—C16'—H16D | 109.5 |
C10—C9—C8 | 118.52 (12) | C13'—C16'—H16D | 148.7 |
C10—C9—H9A | 107.7 | N1'—C16'—H16E | 109.5 |
C8—C9—H9A | 107.7 | C13'—C16'—H16E | 95.9 |
C10—C9—H9B | 107.7 | H16D—C16'—H16E | 109.5 |
C8—C9—H9B | 107.7 | N1'—C16'—H16F | 109.5 |
H9A—C9—H9B | 107.1 | C13'—C16'—H16F | 77.4 |
C1—C10—C14 | 120.73 (13) | H16D—C16'—H16F | 109.5 |
C1—C10—C9 | 126.02 (13) | H16E—C16'—H16F | 109.5 |
C14—C10—C9 | 113.03 (12) | N1'—C17'—O1W | 113.7 (15) |
C12—C11—C13 | 110.41 (12) | N1'—C17'—H17D | 109.5 |
C12—C11—C7 | 101.57 (11) | O1W—C17'—H17D | 72.8 |
C13—C11—C7 | 118.86 (16) | N1'—C17'—H17E | 109.5 |
C12—C11—C13' | 121.9 (15) | O1W—C17'—H17E | 132.9 |
C7—C11—C13' | 112.7 (18) | H17D—C17'—H17E | 109.5 |
C12—C11—H11 | 108.5 | N1'—C17'—H17F | 109.5 |
C13—C11—H11 | 108.5 | O1W—C17'—H17F | 38.1 |
C7—C11—H11 | 108.5 | H17D—C17'—H17F | 109.5 |
O1—C12—O2 | 121.62 (13) | H17E—C17'—H17F | 109.5 |
O1—C12—C11 | 128.80 (13) | C17'—O1W—H1W1 | 164.8 |
O2—C12—C11 | 109.58 (12) | C17'—O1W—H2W1 | 90.8 |
C10—C14—H14A | 109.5 | H1W1—O1W—H2W1 | 103.6 |
C10—C1—C2—C3 | 164.39 (14) | C8—C9—C10—C1 | −50.3 (2) |
C5—C1—C2—C3 | −11.20 (15) | C8—C9—C10—C14 | 135.02 (14) |
C1—C2—C3—C4 | 33.25 (15) | C6—C7—C11—C12 | 36.38 (13) |
C2—C3—C4—O3 | −160.27 (12) | C8—C7—C11—C12 | 158.62 (12) |
C2—C3—C4—C15 | 78.88 (15) | C6—C7—C11—C13 | 157.67 (14) |
C2—C3—C4—C5 | −42.00 (14) | C8—C7—C11—C13 | −80.10 (18) |
C10—C1—C5—C6 | 45.2 (2) | C6—C7—C11—C13' | 168.5 (17) |
C2—C1—C5—C6 | −139.44 (12) | C8—C7—C11—C13' | −69.3 (17) |
C10—C1—C5—C4 | 170.15 (14) | C6—O2—C12—O1 | 179.20 (13) |
C2—C1—C5—C4 | −14.51 (15) | C6—O2—C12—C11 | −1.67 (15) |
O3—C4—C5—C6 | −85.21 (15) | C13—C11—C12—O1 | 29.4 (2) |
C15—C4—C5—C6 | 40.01 (17) | C7—C11—C12—O1 | 156.38 (15) |
C3—C4—C5—C6 | 159.18 (11) | C13'—C11—C12—O1 | 30 (2) |
O3—C4—C5—C1 | 150.16 (11) | C13—C11—C12—O2 | −149.67 (17) |
C15—C4—C5—C1 | −84.62 (14) | C7—C11—C12—O2 | −22.67 (14) |
C3—C4—C5—C1 | 34.56 (14) | C13'—C11—C12—O2 | −149 (2) |
C12—O2—C6—C5 | 150.78 (11) | C12—C11—C13—N1 | −178.49 (19) |
C12—O2—C6—C7 | 25.69 (13) | C7—C11—C13—N1 | 64.8 (3) |
C1—C5—C6—O2 | 172.18 (11) | C13'—C11—C13—N1 | 5 (10) |
C4—C5—C6—O2 | 52.82 (15) | C11—C13—N1—C17 | −172.80 (19) |
C1—C5—C6—C7 | −71.48 (16) | C11—C13—N1—C16 | 66.8 (3) |
C4—C5—C6—C7 | 169.16 (12) | C12—C11—C13'—N1' | −94 (3) |
O2—C6—C7—C8 | −163.62 (11) | C13—C11—C13'—N1' | −91 (11) |
C5—C6—C7—C8 | 77.15 (15) | C7—C11—C13'—N1' | 144 (3) |
O2—C6—C7—C11 | −38.06 (13) | C12—C11—C13'—C16' | −148.3 (17) |
C5—C6—C7—C11 | −157.29 (12) | C13—C11—C13'—C16' | −145 (12) |
C6—C7—C8—C9 | −71.33 (15) | C7—C11—C13'—C16' | 91 (3) |
C11—C7—C8—C9 | 172.75 (12) | C11—C13'—N1'—C16' | −93 (3) |
C7—C8—C9—C10 | 69.48 (17) | C11—C13'—N1'—C17' | 155 (2) |
C2—C1—C10—C14 | 1.9 (2) | C16'—C13'—N1'—C17' | −112 (2) |
C5—C1—C10—C14 | 176.57 (13) | C17'—N1'—C16'—C13' | 114 (2) |
C2—C1—C10—C9 | −172.40 (13) | C13'—N1'—C17'—O1W | −115 (2) |
C5—C1—C10—C9 | 2.2 (2) | C16'—N1'—C17'—O1W | 147.4 (19) |
D—H···A | D—H | H···A | D···A | D—H···A |
O3—H3···O2 | 0.84 | 2.35 | 2.9578 (15) | 129 |
O1W—H1W1···O3i | 0.84 | 2.16 | 2.845 (12) | 139 |
Symmetry code: (i) −x+1/2, −y+1, z−1/2. |
D—H···A | D—H | H···A | D···A | D—H···A |
O3—H3···O2 | 0.84 | 2.35 | 2.9578 (15) | 129.2 |
O1W—H1W1···O3i | 0.84 | 2.16 | 2.845 (12) | 138.7 |
Symmetry code: (i) −x+1/2, −y+1, z−1/2. |
Acknowledgements
This work was supported by the NIH/NCI (grant No. CA158275).
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Micheliolide (MCL) is a natural product extracted from the plant Michelia champaca. MCL belongs to the class of guaianolide sesquiterpene lactones, which are used for the treatment of cancer (Sethi et al. 1984). The exocyclic double bond in such sesquiterpenes is believed to be responsible for their biological properties because of its exceptional chemical reactivity with nucleophilic groups (Rodriguez et al. 1976). The synthesis of MCL was first reported by Sethi et al. (1984) and its crystal structure was described by Acosta et al. (1991). Recently, the N,N-dimethyl amino analog of micheliolide was reported as a potent anti-leukemic agent (Zhang et al. 2012).
The N,N-dimethyl amino analog of micheliolide was synthesized as described by Zhang et al. (2012). Recrystallization of the compound from hexanes gave colorless needles that were suitable for X-ray analysis. The title molecule, Fig. 1, contains a central seven-membered carbocyclic ring fused to a 5-membered carbocylic ring and a trans lactone ring. The two five membered rings are in half-chair conformations, as reported in the literature (Acosta et al., 1991). The X-ray studies revealed that the title compound exhibits an O—H···O intramolecular hydrogen bond between the hydroxyl group and the lactone ring oxygen atom. The structure contains a low occupancy [7.8 (2)% occupancy] partial water molecule and a small amount of correlated disorder of the N(CH3)2 group. The bridge between the seven-membered ring and the lactone ring is trans, giving a dihedral angle between the mean planes of the rings of 4.42 (9)°.