organic compounds
(1S*,3R*,5S*,7S*)-4,4,8,8-Tetrachloro-1-isopropyl-5-methyltricyclo[5.1.0.03,5]octane
aInternational Reseach and Production Holding "Phytochemistry", Gazaliev St 4, 100009 Karaganda, Kazakhstan
*Correspondence e-mail: xray-phyto@yandex.kz
The title compound, C12H16Cl4, is a derivative of the natural product 1-isopropyl-4-methylcyclohexa-1,4-diene, and represents a diastereomer with two trans-fused cyclopropane rings. Both enantiomers are present in the non-centrosymmetric polar Pna21. The central cyclohexane ring is planar within 0.02 (1) Å. The C atoms of dichloromethylene groups deviate from this plane by 1.19 (1) and −1.26 (1) Å, whereas the isopropyl and methyl groups are oriented more equatorially, deviating by 0.71 (1) and −0.87 (1) Å, respectively.
CCDC reference: 989552
Related literature
For the isolation of 1-isopropyl-4-methylcyclohexa-1,4-diene, see: Jamali et al. (2013). For the of a related compound, see: Lynch et al. (1994).
Experimental
Crystal data
|
Data collection: APEX2 (Bruker, 2005); cell SAINT (Bruker, 2005); data reduction: SAINT (Bruker, 2005); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).
Supporting information
CCDC reference: 989552
10.1107/S1600536814004826/ld2121sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536814004826/ld2121Isup2.hkl
Supporting information file. DOI: 10.1107/S1600536814004826/ld2121Isup3.cdx
Supporting information file. DOI: 10.1107/S1600536814004826/ld2121Isup4.cml
The title compound was synthesized by interaction of /g-terpinene 1-isopropyl-4-methylcyclohexa-1,4-diene, which was isolated from the essential oil of above aerial part of Juniperus sabina L., with NaOH in CHCl3 in presence of triethylbenzylammonium chloride with yield 72% and with melting point 80–84°C.
H atoms were positioned geometrically and refined using a riding and rotating model, with C—H = 0.98–1.0 Å and with Uiso(H) = 1.2 (1.5 for methyl groups) times the Ueq(C). The absolute configurations of the crystal was established by
of the Flack parameter.Data collection: APEX2 (Bruker, 2005); cell
SAINT (Bruker, 2005); data reduction: SAINT (Bruker, 2005); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).Fig. 1. The molecular structure of (I), with atom labels and 50% probability displacement ellipsoids for non-H atoms. |
C12H16Cl4 | Dx = 1.476 Mg m−3 |
Mr = 302.05 | Melting point = 357–353 K |
Orthorhombic, Pna21 | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: P 2c -2n | Cell parameters from 5371 reflections |
a = 10.9480 (3) Å | θ = 2.5–29.2° |
b = 11.8207 (3) Å | µ = 0.84 mm−1 |
c = 10.5027 (4) Å | T = 150 K |
V = 1359.19 (7) Å3 | Irregular, colourless |
Z = 4 | 0.30 × 0.26 × 0.02 mm |
F(000) = 624 |
Bruker APEXII CCD diffractometer | 3130 independent reflections |
Radiation source: fine-focus sealed tube | 2973 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.021 |
Detector resolution: 7.11 pixels mm-1 | θmax = 29.7°, θmin = 2.6° |
ϕ and ω scans | h = −13→13 |
Absorption correction: multi-scan (SADABS; Bruker, 2008) | k = −13→15 |
Tmin = 0.786, Tmax = 0.988 | l = −14→13 |
9762 measured reflections |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.023 | H-atom parameters constrained |
wR(F2) = 0.054 | w = 1/[σ2(Fo2) + (0.0259P)2 + 0.1704P] where P = (Fo2 + 2Fc2)/3 |
S = 1.05 | (Δ/σ)max = 0.001 |
3130 reflections | Δρmax = 0.23 e Å−3 |
148 parameters | Δρmin = −0.16 e Å−3 |
1 restraint | Absolute structure: Flack (1983), 1313 Friedel pairs |
Primary atom site location: structure-invariant direct methods | Absolute structure parameter: 0.09 (4) |
C12H16Cl4 | V = 1359.19 (7) Å3 |
Mr = 302.05 | Z = 4 |
Orthorhombic, Pna21 | Mo Kα radiation |
a = 10.9480 (3) Å | µ = 0.84 mm−1 |
b = 11.8207 (3) Å | T = 150 K |
c = 10.5027 (4) Å | 0.30 × 0.26 × 0.02 mm |
Bruker APEXII CCD diffractometer | 3130 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2008) | 2973 reflections with I > 2σ(I) |
Tmin = 0.786, Tmax = 0.988 | Rint = 0.021 |
9762 measured reflections |
R[F2 > 2σ(F2)] = 0.023 | H-atom parameters constrained |
wR(F2) = 0.054 | Δρmax = 0.23 e Å−3 |
S = 1.05 | Δρmin = −0.16 e Å−3 |
3130 reflections | Absolute structure: Flack (1983), 1313 Friedel pairs |
148 parameters | Absolute structure parameter: 0.09 (4) |
1 restraint |
x | y | z | Uiso*/Ueq | ||
Cl1 | 0.57150 (4) | −0.08034 (4) | 1.00600 (5) | 0.03549 (12) | |
Cl2 | 0.38725 (4) | 0.05915 (4) | 1.12573 (5) | 0.03067 (11) | |
Cl3 | −0.09617 (3) | 0.02606 (4) | 0.84836 (4) | 0.02866 (11) | |
Cl4 | 0.10624 (4) | −0.10256 (4) | 0.74584 (4) | 0.02984 (11) | |
C1 | 0.15053 (13) | 0.08350 (13) | 0.90807 (15) | 0.0188 (3) | |
C2 | 0.27707 (13) | 0.08167 (13) | 0.84709 (17) | 0.0232 (3) | |
H2A | 0.2665 | 0.0869 | 0.7537 | 0.028* | |
H2B | 0.3213 | 0.1504 | 0.8748 | 0.028* | |
C3 | 0.35723 (14) | −0.01975 (14) | 0.87507 (16) | 0.0228 (3) | |
H3 | 0.4093 | −0.0434 | 0.8015 | 0.027* | |
C4 | 0.41698 (13) | −0.03625 (14) | 1.00155 (18) | 0.0240 (3) | |
C5 | 0.31894 (14) | −0.11786 (14) | 0.96113 (17) | 0.0223 (3) | |
C6 | 0.19710 (14) | −0.11148 (14) | 1.03019 (16) | 0.0223 (3) | |
H6A | 0.1526 | −0.1831 | 1.0148 | 0.027* | |
H6B | 0.2136 | −0.1068 | 1.1227 | 0.027* | |
C7 | 0.11359 (13) | −0.01439 (13) | 0.99450 (16) | 0.0186 (3) | |
H7 | 0.0555 | 0.0077 | 1.0636 | 0.022* | |
C8 | 0.06109 (13) | −0.00524 (14) | 0.86426 (16) | 0.0204 (3) | |
C9 | 0.10022 (14) | 0.20144 (15) | 0.93809 (17) | 0.0230 (4) | |
H9 | 0.0144 | 0.1915 | 0.9687 | 0.028* | |
C10 | 0.17182 (18) | 0.25947 (16) | 1.04511 (19) | 0.0333 (4) | |
H10A | 0.2567 | 0.2704 | 1.0183 | 0.050* | |
H10B | 0.1698 | 0.2120 | 1.1216 | 0.050* | |
H10C | 0.1348 | 0.3331 | 1.0639 | 0.050* | |
C11 | 0.09512 (18) | 0.27444 (16) | 0.8189 (2) | 0.0338 (4) | |
H11A | 0.0558 | 0.3467 | 0.8390 | 0.051* | |
H11B | 0.0481 | 0.2353 | 0.7529 | 0.051* | |
H11C | 0.1782 | 0.2883 | 0.7880 | 0.051* | |
C12 | 0.35564 (17) | −0.23654 (15) | 0.92405 (19) | 0.0303 (4) | |
H12A | 0.4327 | −0.2342 | 0.8766 | 0.045* | |
H12B | 0.2918 | −0.2700 | 0.8706 | 0.045* | |
H12C | 0.3662 | −0.2824 | 1.0010 | 0.045* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cl1 | 0.01859 (18) | 0.0338 (2) | 0.0541 (3) | 0.00717 (17) | −0.0056 (2) | 0.0017 (2) |
Cl2 | 0.0291 (2) | 0.0298 (2) | 0.0332 (2) | 0.00478 (17) | −0.00942 (19) | −0.00751 (19) |
Cl3 | 0.01775 (18) | 0.0357 (3) | 0.0325 (2) | 0.00250 (16) | −0.00432 (19) | 0.00241 (19) |
Cl4 | 0.0297 (2) | 0.0359 (3) | 0.0239 (2) | 0.00577 (17) | −0.00508 (17) | −0.00837 (18) |
C1 | 0.0177 (7) | 0.0225 (8) | 0.0161 (8) | 0.0025 (6) | 0.0012 (6) | 0.0021 (6) |
C2 | 0.0202 (8) | 0.0252 (8) | 0.0241 (9) | 0.0021 (6) | 0.0043 (7) | 0.0065 (7) |
C3 | 0.0183 (7) | 0.0276 (9) | 0.0227 (9) | 0.0034 (6) | 0.0030 (6) | 0.0003 (7) |
C4 | 0.0166 (7) | 0.0250 (9) | 0.0304 (10) | 0.0056 (6) | −0.0019 (7) | −0.0004 (8) |
C5 | 0.0203 (7) | 0.0220 (8) | 0.0247 (8) | 0.0039 (6) | −0.0024 (6) | −0.0004 (7) |
C6 | 0.0209 (7) | 0.0241 (9) | 0.0220 (8) | 0.0006 (6) | −0.0001 (6) | 0.0028 (7) |
C7 | 0.0171 (7) | 0.0214 (8) | 0.0173 (8) | 0.0004 (5) | 0.0001 (6) | 0.0008 (6) |
C8 | 0.0166 (7) | 0.0249 (8) | 0.0198 (9) | 0.0030 (6) | −0.0007 (6) | −0.0003 (7) |
C9 | 0.0197 (7) | 0.0236 (9) | 0.0256 (9) | 0.0049 (7) | 0.0014 (6) | 0.0022 (7) |
C10 | 0.0332 (10) | 0.0255 (9) | 0.0411 (12) | 0.0068 (8) | −0.0033 (8) | −0.0080 (8) |
C11 | 0.0317 (10) | 0.0299 (10) | 0.0399 (12) | 0.0072 (8) | 0.0031 (7) | 0.0124 (9) |
C12 | 0.0295 (9) | 0.0254 (10) | 0.0359 (11) | 0.0061 (7) | −0.0030 (8) | −0.0046 (8) |
Cl1—C4 | 1.7707 (15) | C6—C7 | 1.514 (2) |
Cl2—C4 | 1.7547 (19) | C6—H6A | 0.9900 |
Cl3—C8 | 1.7689 (14) | C6—H6B | 0.9900 |
Cl4—C8 | 1.7648 (17) | C7—C8 | 1.488 (2) |
C1—C8 | 1.507 (2) | C7—H7 | 1.0000 |
C1—C7 | 1.525 (2) | C9—C11 | 1.522 (2) |
C1—C2 | 1.526 (2) | C9—C10 | 1.532 (3) |
C1—C9 | 1.532 (2) | C9—H9 | 1.0000 |
C2—C3 | 1.515 (2) | C10—H10A | 0.9800 |
C2—H2A | 0.9900 | C10—H10B | 0.9800 |
C2—H2B | 0.9900 | C10—H10C | 0.9800 |
C3—C4 | 1.493 (2) | C11—H11A | 0.9800 |
C3—C5 | 1.529 (2) | C11—H11B | 0.9800 |
C3—H3 | 1.0000 | C11—H11C | 0.9800 |
C4—C5 | 1.504 (2) | C12—H12A | 0.9800 |
C5—C12 | 1.510 (2) | C12—H12B | 0.9800 |
C5—C6 | 1.520 (2) | C12—H12C | 0.9800 |
C8—C1—C7 | 58.76 (10) | C8—C7—C6 | 121.06 (14) |
C8—C1—C2 | 116.86 (14) | C8—C7—C1 | 60.00 (11) |
C7—C1—C2 | 118.66 (13) | C6—C7—C1 | 124.20 (13) |
C8—C1—C9 | 117.56 (13) | C8—C7—H7 | 113.7 |
C7—C1—C9 | 118.21 (13) | C6—C7—H7 | 113.7 |
C2—C1—C9 | 115.19 (13) | C1—C7—H7 | 113.7 |
C3—C2—C1 | 117.11 (13) | C7—C8—C1 | 61.24 (11) |
C3—C2—H2A | 108.0 | C7—C8—Cl4 | 119.49 (11) |
C1—C2—H2A | 108.0 | C1—C8—Cl4 | 119.14 (11) |
C3—C2—H2B | 108.0 | C7—C8—Cl3 | 118.56 (11) |
C1—C2—H2B | 108.0 | C1—C8—Cl3 | 121.04 (11) |
H2A—C2—H2B | 107.3 | Cl4—C8—Cl3 | 110.02 (9) |
C4—C3—C2 | 121.99 (14) | C11—C9—C1 | 111.10 (14) |
C4—C3—C5 | 59.69 (11) | C11—C9—C10 | 111.62 (16) |
C2—C3—C5 | 123.80 (13) | C1—C9—C10 | 111.99 (13) |
C4—C3—H3 | 113.7 | C11—C9—H9 | 107.3 |
C2—C3—H3 | 113.7 | C1—C9—H9 | 107.3 |
C5—C3—H3 | 113.7 | C10—C9—H9 | 107.3 |
C3—C4—C5 | 61.33 (11) | C9—C10—H10A | 109.5 |
C3—C4—Cl2 | 119.73 (11) | C9—C10—H10B | 109.5 |
C5—C4—Cl2 | 119.31 (12) | H10A—C10—H10B | 109.5 |
C3—C4—Cl1 | 118.71 (12) | C9—C10—H10C | 109.5 |
C5—C4—Cl1 | 120.02 (12) | H10A—C10—H10C | 109.5 |
Cl2—C4—Cl1 | 110.29 (9) | H10B—C10—H10C | 109.5 |
C4—C5—C12 | 118.59 (14) | C9—C11—H11A | 109.5 |
C4—C5—C6 | 117.36 (14) | C9—C11—H11B | 109.5 |
C12—C5—C6 | 113.74 (14) | H11A—C11—H11B | 109.5 |
C4—C5—C3 | 58.98 (11) | C9—C11—H11C | 109.5 |
C12—C5—C3 | 118.63 (15) | H11A—C11—H11C | 109.5 |
C6—C5—C3 | 119.01 (13) | H11B—C11—H11C | 109.5 |
C7—C6—C5 | 116.70 (14) | C5—C12—H12A | 109.5 |
C7—C6—H6A | 108.1 | C5—C12—H12B | 109.5 |
C5—C6—H6A | 108.1 | H12A—C12—H12B | 109.5 |
C7—C6—H6B | 108.1 | C5—C12—H12C | 109.5 |
C5—C6—H6B | 108.1 | H12A—C12—H12C | 109.5 |
H6A—C6—H6B | 107.3 | H12B—C12—H12C | 109.5 |
C8—C1—C2—C3 | −66.2 (2) | C5—C6—C7—C8 | 64.6 (2) |
C7—C1—C2—C3 | 1.2 (2) | C5—C6—C7—C1 | −8.1 (2) |
C9—C1—C2—C3 | 149.62 (15) | C2—C1—C7—C8 | −105.70 (16) |
C1—C2—C3—C4 | −73.4 (2) | C9—C1—C7—C8 | 106.78 (15) |
C1—C2—C3—C5 | −0.8 (2) | C8—C1—C7—C6 | 109.15 (17) |
C2—C3—C4—C5 | 113.23 (16) | C2—C1—C7—C6 | 3.4 (2) |
C2—C3—C4—Cl2 | 3.9 (2) | C9—C1—C7—C6 | −144.07 (16) |
C5—C3—C4—Cl2 | −109.28 (14) | C6—C7—C8—C1 | −114.21 (16) |
C2—C3—C4—Cl1 | −136.23 (13) | C6—C7—C8—Cl4 | −5.1 (2) |
C5—C3—C4—Cl1 | 110.53 (15) | C1—C7—C8—Cl4 | 109.13 (13) |
C3—C4—C5—C12 | 108.00 (18) | C6—C7—C8—Cl3 | 134.01 (13) |
Cl2—C4—C5—C12 | −142.04 (15) | C1—C7—C8—Cl3 | −111.78 (14) |
Cl1—C4—C5—C12 | −0.4 (2) | C2—C1—C8—C7 | 108.76 (15) |
C3—C4—C5—C6 | −109.03 (16) | C9—C1—C8—C7 | −107.88 (16) |
Cl2—C4—C5—C6 | 0.9 (2) | C7—C1—C8—Cl4 | −109.69 (14) |
Cl1—C4—C5—C6 | 142.53 (14) | C2—C1—C8—Cl4 | −0.9 (2) |
Cl2—C4—C5—C3 | 109.95 (14) | C9—C1—C8—Cl4 | 142.43 (13) |
Cl1—C4—C5—C3 | −108.44 (15) | C7—C1—C8—Cl3 | 107.83 (14) |
C2—C3—C5—C4 | −110.31 (18) | C2—C1—C8—Cl3 | −143.41 (13) |
C4—C3—C5—C12 | −107.94 (17) | C9—C1—C8—Cl3 | 0.0 (2) |
C2—C3—C5—C12 | 141.75 (17) | C8—C1—C9—C11 | −86.75 (17) |
C4—C3—C5—C6 | 106.25 (17) | C7—C1—C9—C11 | −154.17 (14) |
C2—C3—C5—C6 | −4.1 (2) | C2—C1—C9—C11 | 57.21 (19) |
C4—C5—C6—C7 | 76.0 (2) | C8—C1—C9—C10 | 147.68 (16) |
C12—C5—C6—C7 | −139.28 (15) | C7—C1—C9—C10 | 80.26 (18) |
C3—C5—C6—C7 | 8.1 (2) | C2—C1—C9—C10 | −68.36 (19) |
Experimental details
Crystal data | |
Chemical formula | C12H16Cl4 |
Mr | 302.05 |
Crystal system, space group | Orthorhombic, Pna21 |
Temperature (K) | 150 |
a, b, c (Å) | 10.9480 (3), 11.8207 (3), 10.5027 (4) |
V (Å3) | 1359.19 (7) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.84 |
Crystal size (mm) | 0.30 × 0.26 × 0.02 |
Data collection | |
Diffractometer | Bruker APEXII CCD diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 2008) |
Tmin, Tmax | 0.786, 0.988 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 9762, 3130, 2973 |
Rint | 0.021 |
(sin θ/λ)max (Å−1) | 0.698 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.023, 0.054, 1.05 |
No. of reflections | 3130 |
No. of parameters | 148 |
No. of restraints | 1 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.23, −0.16 |
Absolute structure | Flack (1983), 1313 Friedel pairs |
Absolute structure parameter | 0.09 (4) |
Computer programs: APEX2 (Bruker, 2005), SAINT (Bruker, 2005), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008).
Acknowledgements
The authors thank Professor Yurii V. Gatilov (Institute of Organic Chemistry, Novosibirsk, Russia) for the data collection.
References
Bruker (2005). APEX2 and SAINT. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Bruker (2008). SADABS. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Flack, H. D. (1983). Acta Cryst. A39, 876–881. CrossRef CAS Web of Science IUCr Journals Google Scholar
Jamali, C. A., Kasrat, A., Bekkouche, K., Hassani, L., Wohlmuth, H., Leach, D. & Abbad, A. (2013). Ind. Crops Prod. 49, 366–372. Web of Science CrossRef CAS Google Scholar
Lynch, V. M., Baran, J. R., Lagow, R. J. & Davis, B. E. (1994). Acta Cryst. C50, 1765–1768. CSD CrossRef CAS Web of Science IUCr Journals Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
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The molecule of the title compound, (I) (Fig.1) is an enantiomeric pair of diastereomers. The relative configuration at positions 1, 3, 5 and 7 was established as S, R, S, and S, respectively. The cyclohexane ring is approximately planar, the maximum deviation from the mean plane being 0.02 (1) Å. The atoms C4 and C8 of cyclopentane rings deviate from this plane on 1.19 (1) and -1.26 (1) Å, atom C9 of isopropyl and atom C12 of methyl groups deviate on 0.71 (1) and -0.87 (1) Å, respectively.