organic compounds
5-Fluoro-2-(2-fluorophenyl)-3-methylsulfinyl-1-benzofuran
aDepartment of Chemistry, Dongeui University, San 24 Kaya-dong, Busanjin-gu, Busan 614-714, Republic of Korea, and bDepartment of Chemistry, Pukyong National University, 599-1 Daeyeon 3-dong, Nam-gu, Busan 608-737, Republic of Korea
*Correspondence e-mail: uklee@pknu.ac.kr
In the title compound, C15H10F2O2S, the dihedral angle between the plane of the benzofuran ring system (r.m.s. deviation = 0.015 Å) and that of the 2-fluorophenyl ring is 28.53 (6)°. In the crystal, molecules are linked by C—H⋯O and C—H⋯F hydrogen bonds, and by π–π interactions between the furan and benzene rings of neighbouring molecules [centroid–centroid distance = 3.625 (2) Å], forming a three-dimensional network.
Keywords: crystal structure.
CCDC reference: 1009826
Related literature
For background information and the crystal structures of related compounds, see: Choi et al. (2009a,b, 2012).
Experimental
Crystal data
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Data collection: APEX2 (Bruker, 2009); cell SAINT (Bruker, 2009); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012) and DIAMOND (Brandenburg, 1998); software used to prepare material for publication: SHELXL97.
Supporting information
CCDC reference: 1009826
https://doi.org/10.1107/S1600536814014810/bt6985sup1.cif
contains datablock I. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S1600536814014810/bt6985Isup2.hkl
Supporting information file. DOI: https://doi.org/10.1107/S1600536814014810/bt6985Isup3.cml
3-Chloroperoxybenzoic acid (77%, 269 mg, 1.2 mmol) was added in small portions to a stirred solution of 5-fluoro-2-(2-fluorophenyl)-3-methylsulfanyl-1-benzofuran (304 mg, 1.1 mmol) in dichloromethane (35 mL) at 273 K. After being stirred at room temperature for 4h, the mixture was washed with saturated sodium bicarbonate solution and the organic layer was separated, dried over magnesium sulfate, filtered and concentrated at reduced pressure. The residue was purified by
(hexane–ethyl acetate, 1:1 v/v) to afford the title compound as a colorless solid [yield 73%, m.p. 412–413 K; Rf = 0.46 (hexane–ethyl acetate, 1:1 v/v)]. Single crystals suitable for X-ray diffraction were prepared by slow evaporation of a solution of the title compound in acetone at room temperature.All H atoms were positioned geometrically and refined using a riding model, with C—H = 0.95 Å for aryl and 0.98 Å for methyl H atoms, respectively. Uiso (H) = 1.2Ueq (C) for aryl and 1.5Ueq (C) for methyl H atoms. The positions of methyl hydrogens were optimized using the SHELXL-97 command AFIX 137 (Sheldrick, 2008).
As a part of our ongoing project of 5-fluoro-3-methylsulfinyl-1-benzofuran derivatives containing 4-bromophenyl (Choi et al., 2009a), 4-fluorophenyl (Choi et al., 2009b) and 4-methylphenyl (Choi et al., 2012) substituents in 2-position, we report herein on the
of the title compound.In the title molecule (Fig. 1), the benzofuran unit is essentially planar, with a mean deviation of 0.015 (1) Å from the least-squares plane defined by the nine constituent atoms. The 2-fluorophenyl ring is essentially planar, with a mean deviation of 0.053 (1) Å from the least-squares plane defined by the six constituent atoms. The dihedral angle formed by the benzofuran ring system and the 2-fluorophenyl ring is 28.53 (6)°. In the π–π interactions between the furan and benzene rings of neighbouring molecules, with a Cg1···Cg2iv distance of 3.625 (2) Å and an interplanar distance of 3.295 (2) Å resulting in a slippage of 1.511 (2) Å (Cg1 and Cg2 are the centroids of the C1/C2/C7/O1/C8 furan ring and the C2–C7 benzene ring, respectively), forming a three-dimensional network.
(Fig. 2), molecules are inked by C—H···O and C—H···F hydrogen bonds (Table 1), and byFor background information and the crystal structures of related compounds, see: Choi et al. (2009a,b, 2012).
Data collection: APEX2 (Bruker, 2009); cell
SAINT (Bruker, 2009); data reduction: SAINT (Bruker, 2009); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012) and DIAMOND (Brandenburg, 1998); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008).C15H10F2O2S | F(000) = 600 |
Mr = 292.29 | Dx = 1.527 Mg m−3 |
Monoclinic, P21/c | Melting point = 413–412 K |
Hall symbol: -P 2ybc | Mo Kα radiation, λ = 0.71073 Å |
a = 8.6184 (2) Å | Cell parameters from 4357 reflections |
b = 16.8358 (4) Å | θ = 2.4–27.8° |
c = 9.4019 (2) Å | µ = 0.28 mm−1 |
β = 111.254 (1)° | T = 173 K |
V = 1271.40 (5) Å3 | Block, colourless |
Z = 4 | 0.55 × 0.27 × 0.24 mm |
Bruker SMART APEXII CCD diffractometer | 3118 independent reflections |
Radiation source: rotating anode | 2650 reflections with I > 2σ(I) |
Graphite multilayer monochromator | Rint = 0.029 |
Detector resolution: 10.0 pixels mm-1 | θmax = 28.3°, θmin = 2.4° |
φ and ω scans | h = −10→11 |
Absorption correction: multi-scan (SADABS; Bruker, 2009) | k = −22→19 |
Tmin = 0.863, Tmax = 0.937 | l = −12→12 |
12086 measured reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.038 | Hydrogen site location: difference Fourier map |
wR(F2) = 0.100 | H-atom parameters constrained |
S = 1.07 | w = 1/[σ2(Fo2) + (0.0492P)2 + 0.3389P] where P = (Fo2 + 2Fc2)/3 |
3118 reflections | (Δ/σ)max = 0.001 |
182 parameters | Δρmax = 0.31 e Å−3 |
0 restraints | Δρmin = −0.40 e Å−3 |
C15H10F2O2S | V = 1271.40 (5) Å3 |
Mr = 292.29 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 8.6184 (2) Å | µ = 0.28 mm−1 |
b = 16.8358 (4) Å | T = 173 K |
c = 9.4019 (2) Å | 0.55 × 0.27 × 0.24 mm |
β = 111.254 (1)° |
Bruker SMART APEXII CCD diffractometer | 3118 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2009) | 2650 reflections with I > 2σ(I) |
Tmin = 0.863, Tmax = 0.937 | Rint = 0.029 |
12086 measured reflections |
R[F2 > 2σ(F2)] = 0.038 | 0 restraints |
wR(F2) = 0.100 | H-atom parameters constrained |
S = 1.07 | Δρmax = 0.31 e Å−3 |
3118 reflections | Δρmin = −0.40 e Å−3 |
182 parameters |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
S1 | 0.71915 (5) | 0.69054 (2) | 0.61445 (4) | 0.02927 (12) | |
F1 | 1.13845 (13) | 0.42819 (7) | 0.91201 (11) | 0.0485 (3) | |
F2 | 0.38183 (11) | 0.67630 (6) | 0.41827 (10) | 0.0374 (2) | |
O1 | 0.67546 (12) | 0.49850 (6) | 0.36067 (11) | 0.0281 (2) | |
O2 | 0.89953 (15) | 0.70691 (7) | 0.69905 (14) | 0.0431 (3) | |
C1 | 0.71116 (17) | 0.59444 (8) | 0.53646 (16) | 0.0234 (3) | |
C2 | 0.82307 (17) | 0.53035 (9) | 0.60821 (17) | 0.0250 (3) | |
C3 | 0.94153 (18) | 0.51622 (10) | 0.75344 (17) | 0.0299 (3) | |
H3 | 0.9632 | 0.5534 | 0.8344 | 0.036* | |
C4 | 1.02416 (19) | 0.44539 (10) | 0.77150 (18) | 0.0336 (4) | |
C5 | 1.0016 (2) | 0.38969 (10) | 0.6577 (2) | 0.0361 (4) | |
H5 | 1.0650 | 0.3421 | 0.6785 | 0.043* | |
C6 | 0.8859 (2) | 0.40384 (9) | 0.5134 (2) | 0.0330 (3) | |
H6 | 0.8681 | 0.3673 | 0.4320 | 0.040* | |
C7 | 0.79767 (17) | 0.47404 (9) | 0.49421 (17) | 0.0267 (3) | |
C8 | 0.62565 (17) | 0.57246 (9) | 0.38947 (16) | 0.0242 (3) | |
C9 | 0.49420 (17) | 0.60820 (9) | 0.25958 (16) | 0.0254 (3) | |
C10 | 0.37363 (18) | 0.65773 (9) | 0.27581 (17) | 0.0271 (3) | |
C11 | 0.24304 (19) | 0.68798 (10) | 0.15475 (19) | 0.0324 (3) | |
H11 | 0.1626 | 0.7215 | 0.1713 | 0.039* | |
C12 | 0.2317 (2) | 0.66846 (11) | 0.00904 (19) | 0.0382 (4) | |
H12 | 0.1426 | 0.6886 | −0.0764 | 0.046* | |
C13 | 0.3500 (2) | 0.61954 (12) | −0.01285 (19) | 0.0417 (4) | |
H13 | 0.3418 | 0.6064 | −0.1136 | 0.050* | |
C14 | 0.4797 (2) | 0.58969 (11) | 0.10995 (18) | 0.0351 (4) | |
H14 | 0.5601 | 0.5562 | 0.0930 | 0.042* | |
C15 | 0.6325 (2) | 0.66632 (12) | 0.7563 (2) | 0.0435 (4) | |
H15A | 0.6984 | 0.6239 | 0.8221 | 0.065* | |
H15B | 0.5173 | 0.6484 | 0.7060 | 0.065* | |
H15C | 0.6347 | 0.7135 | 0.8181 | 0.065* |
U11 | U22 | U33 | U12 | U13 | U23 | |
S1 | 0.0313 (2) | 0.0205 (2) | 0.0279 (2) | 0.00149 (14) | 0.00106 (15) | −0.00264 (14) |
F1 | 0.0421 (6) | 0.0544 (7) | 0.0399 (6) | 0.0162 (5) | 0.0039 (5) | 0.0204 (5) |
F2 | 0.0311 (5) | 0.0469 (6) | 0.0322 (5) | 0.0074 (4) | 0.0092 (4) | −0.0046 (4) |
O1 | 0.0285 (5) | 0.0232 (5) | 0.0278 (5) | 0.0023 (4) | 0.0045 (4) | −0.0042 (4) |
O2 | 0.0356 (6) | 0.0315 (7) | 0.0463 (7) | −0.0063 (5) | −0.0041 (5) | −0.0079 (5) |
C1 | 0.0240 (7) | 0.0200 (7) | 0.0239 (7) | −0.0001 (5) | 0.0060 (5) | 0.0002 (5) |
C2 | 0.0239 (7) | 0.0225 (7) | 0.0278 (7) | 0.0003 (5) | 0.0085 (6) | 0.0026 (6) |
C3 | 0.0289 (7) | 0.0308 (8) | 0.0271 (8) | 0.0014 (6) | 0.0068 (6) | 0.0047 (6) |
C4 | 0.0273 (7) | 0.0373 (9) | 0.0332 (8) | 0.0043 (6) | 0.0073 (6) | 0.0148 (7) |
C5 | 0.0333 (8) | 0.0262 (8) | 0.0509 (10) | 0.0080 (6) | 0.0177 (7) | 0.0123 (7) |
C6 | 0.0354 (8) | 0.0223 (8) | 0.0426 (9) | 0.0026 (6) | 0.0155 (7) | 0.0013 (7) |
C7 | 0.0256 (7) | 0.0234 (7) | 0.0293 (8) | 0.0004 (6) | 0.0079 (6) | 0.0026 (6) |
C8 | 0.0233 (7) | 0.0207 (7) | 0.0269 (7) | −0.0001 (5) | 0.0071 (6) | −0.0013 (6) |
C9 | 0.0229 (7) | 0.0235 (7) | 0.0251 (7) | −0.0021 (5) | 0.0029 (5) | −0.0002 (6) |
C10 | 0.0250 (7) | 0.0253 (7) | 0.0277 (7) | −0.0033 (6) | 0.0056 (6) | −0.0001 (6) |
C11 | 0.0247 (7) | 0.0280 (8) | 0.0398 (9) | 0.0000 (6) | 0.0059 (6) | 0.0058 (7) |
C12 | 0.0305 (8) | 0.0389 (10) | 0.0333 (9) | −0.0031 (7) | −0.0027 (7) | 0.0103 (7) |
C13 | 0.0409 (9) | 0.0522 (11) | 0.0237 (8) | −0.0017 (8) | 0.0020 (7) | 0.0002 (7) |
C14 | 0.0332 (8) | 0.0390 (10) | 0.0286 (8) | 0.0031 (7) | 0.0059 (6) | −0.0041 (7) |
C15 | 0.0510 (11) | 0.0494 (11) | 0.0300 (9) | 0.0126 (9) | 0.0143 (8) | −0.0051 (8) |
S1—O2 | 1.4930 (12) | C6—C7 | 1.381 (2) |
S1—C1 | 1.7675 (14) | C6—H6 | 0.9500 |
S1—C15 | 1.7952 (18) | C8—C9 | 1.461 (2) |
F1—C4 | 1.3623 (18) | C9—C10 | 1.383 (2) |
F2—C10 | 1.3521 (17) | C9—C14 | 1.402 (2) |
O1—C8 | 1.3757 (17) | C10—C11 | 1.376 (2) |
O1—C7 | 1.3772 (18) | C11—C12 | 1.377 (2) |
C1—C8 | 1.3606 (19) | C11—H11 | 0.9500 |
C1—C2 | 1.441 (2) | C12—C13 | 1.383 (3) |
C2—C7 | 1.388 (2) | C12—H12 | 0.9500 |
C2—C3 | 1.397 (2) | C13—C14 | 1.378 (2) |
C3—C4 | 1.368 (2) | C13—H13 | 0.9500 |
C3—H3 | 0.9500 | C14—H14 | 0.9500 |
C4—C5 | 1.383 (3) | C15—H15A | 0.9800 |
C5—C6 | 1.382 (2) | C15—H15B | 0.9800 |
C5—H5 | 0.9500 | C15—H15C | 0.9800 |
O2—S1—C1 | 105.45 (7) | C1—C8—C9 | 135.03 (14) |
O2—S1—C15 | 106.22 (8) | O1—C8—C9 | 114.27 (12) |
C1—S1—C15 | 97.82 (8) | C10—C9—C14 | 116.59 (14) |
C8—O1—C7 | 106.33 (11) | C10—C9—C8 | 122.83 (13) |
C8—C1—C2 | 107.22 (13) | C14—C9—C8 | 120.49 (14) |
C8—C1—S1 | 126.55 (11) | F2—C10—C11 | 117.86 (14) |
C2—C1—S1 | 124.91 (11) | F2—C10—C9 | 118.49 (13) |
C7—C2—C3 | 119.55 (14) | C11—C10—C9 | 123.63 (14) |
C7—C2—C1 | 104.98 (13) | C10—C11—C12 | 118.45 (15) |
C3—C2—C1 | 135.45 (14) | C10—C11—H11 | 120.8 |
C4—C3—C2 | 115.65 (15) | C12—C11—H11 | 120.8 |
C4—C3—H3 | 122.2 | C11—C12—C13 | 119.99 (15) |
C2—C3—H3 | 122.2 | C11—C12—H12 | 120.0 |
F1—C4—C3 | 117.82 (15) | C13—C12—H12 | 120.0 |
F1—C4—C5 | 117.12 (14) | C14—C13—C12 | 120.69 (16) |
C3—C4—C5 | 125.06 (15) | C14—C13—H13 | 119.7 |
C6—C5—C4 | 119.46 (15) | C12—C13—H13 | 119.7 |
C6—C5—H5 | 120.3 | C13—C14—C9 | 120.65 (16) |
C4—C5—H5 | 120.3 | C13—C14—H14 | 119.7 |
C7—C6—C5 | 116.30 (15) | C9—C14—H14 | 119.7 |
C7—C6—H6 | 121.9 | S1—C15—H15A | 109.5 |
C5—C6—H6 | 121.9 | S1—C15—H15B | 109.5 |
O1—C7—C6 | 125.31 (14) | H15A—C15—H15B | 109.5 |
O1—C7—C2 | 110.75 (12) | S1—C15—H15C | 109.5 |
C6—C7—C2 | 123.93 (14) | H15A—C15—H15C | 109.5 |
C1—C8—O1 | 110.69 (12) | H15B—C15—H15C | 109.5 |
O2—S1—C1—C8 | −131.06 (13) | C1—C2—C7—C6 | 177.33 (14) |
C15—S1—C1—C8 | 119.65 (14) | C2—C1—C8—O1 | −0.41 (16) |
O2—S1—C1—C2 | 34.10 (14) | S1—C1—C8—O1 | 166.89 (10) |
C15—S1—C1—C2 | −75.19 (14) | C2—C1—C8—C9 | 178.28 (15) |
C8—C1—C2—C7 | 1.30 (15) | S1—C1—C8—C9 | −14.4 (2) |
S1—C1—C2—C7 | −166.26 (11) | C7—O1—C8—C1 | −0.67 (15) |
C8—C1—C2—C3 | 179.85 (16) | C7—O1—C8—C9 | −179.65 (12) |
S1—C1—C2—C3 | 12.3 (2) | C1—C8—C9—C10 | −31.3 (3) |
C7—C2—C3—C4 | −0.5 (2) | O1—C8—C9—C10 | 147.36 (14) |
C1—C2—C3—C4 | −178.85 (16) | C1—C8—C9—C14 | 152.31 (17) |
C2—C3—C4—F1 | −178.67 (13) | O1—C8—C9—C14 | −29.0 (2) |
C2—C3—C4—C5 | 1.7 (2) | C14—C9—C10—F2 | 179.21 (13) |
F1—C4—C5—C6 | 179.35 (14) | C8—C9—C10—F2 | 2.7 (2) |
C3—C4—C5—C6 | −1.0 (3) | C14—C9—C10—C11 | 0.7 (2) |
C4—C5—C6—C7 | −0.9 (2) | C8—C9—C10—C11 | −175.83 (14) |
C8—O1—C7—C6 | −177.54 (14) | F2—C10—C11—C12 | −178.95 (14) |
C8—O1—C7—C2 | 1.55 (16) | C9—C10—C11—C12 | −0.4 (2) |
C5—C6—C7—O1 | −178.87 (14) | C10—C11—C12—C13 | 0.0 (3) |
C5—C6—C7—C2 | 2.2 (2) | C11—C12—C13—C14 | 0.2 (3) |
C3—C2—C7—O1 | 179.41 (12) | C12—C13—C14—C9 | 0.1 (3) |
C1—C2—C7—O1 | −1.76 (16) | C10—C9—C14—C13 | −0.5 (2) |
C3—C2—C7—C6 | −1.5 (2) | C8—C9—C14—C13 | 176.09 (15) |
D—H···A | D—H | H···A | D···A | D—H···A |
C5—H5···O2i | 0.95 | 2.52 | 3.343 (2) | 145 |
C12—H12···O2ii | 0.95 | 2.39 | 3.326 (2) | 166 |
C15—H15A···F1iii | 0.98 | 2.54 | 3.419 (2) | 149 |
Symmetry codes: (i) −x+2, y−1/2, −z+3/2; (ii) x−1, y, z−1; (iii) −x+2, −y+1, −z+2. |
D—H···A | D—H | H···A | D···A | D—H···A |
C5—H5···O2i | 0.95 | 2.52 | 3.343 (2) | 145.3 |
C12—H12···O2ii | 0.95 | 2.39 | 3.326 (2) | 166.4 |
C15—H15A···F1iii | 0.98 | 2.54 | 3.419 (2) | 149.4 |
Symmetry codes: (i) −x+2, y−1/2, −z+3/2; (ii) x−1, y, z−1; (iii) −x+2, −y+1, −z+2. |
References
Brandenburg, K. (1998). DIAMOND. Crystal Impact GbR, Bonn, Germany. Google Scholar
Bruker (2009). APEX2, SADABS and SAINT. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Choi, H. D., Seo, P. J. & Lee, U. (2012). Acta Cryst. E68, o3338. CSD CrossRef IUCr Journals Google Scholar
Choi, H. D., Seo, P. J., Son, B. W. & Lee, U. (2009a). Acta Cryst. E65, o2084. Web of Science CSD CrossRef IUCr Journals Google Scholar
Choi, H. D., Seo, P. J., Son, B. W. & Lee, U. (2009b). Acta Cryst. E65, o2608. Web of Science CSD CrossRef IUCr Journals Google Scholar
Farrugia, L. J. (2012). J. Appl. Cryst. 45, 849–854. Web of Science CrossRef CAS IUCr Journals Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
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As a part of our ongoing project of 5-fluoro-3-methylsulfinyl-1-benzofuran derivatives containing 4-bromophenyl (Choi et al., 2009a), 4-fluorophenyl (Choi et al., 2009b) and 4-methylphenyl (Choi et al., 2012) substituents in 2-position, we report herein on the crystal structure of the title compound.
In the title molecule (Fig. 1), the benzofuran unit is essentially planar, with a mean deviation of 0.015 (1) Å from the least-squares plane defined by the nine constituent atoms. The 2-fluorophenyl ring is essentially planar, with a mean deviation of 0.053 (1) Å from the least-squares plane defined by the six constituent atoms. The dihedral angle formed by the benzofuran ring system and the 2-fluorophenyl ring is 28.53 (6)°. In the crystal structure (Fig. 2), molecules are inked by C—H···O and C—H···F hydrogen bonds (Table 1), and by π–π interactions between the furan and benzene rings of neighbouring molecules, with a Cg1···Cg2iv distance of 3.625 (2) Å and an interplanar distance of 3.295 (2) Å resulting in a slippage of 1.511 (2) Å (Cg1 and Cg2 are the centroids of the C1/C2/C7/O1/C8 furan ring and the C2–C7 benzene ring, respectively), forming a three-dimensional network.