organic compounds
of 5-iodo-2-methyl-3-[(4-methylphenyl)sulfonyl]-1-benzofuran
aDepartment of Chemistry, Dongeui University, San 24 Kaya-dong, Busanjin-gu, Busan 614-714, Republic of Korea, and bDepartment of Chemistry, Pukyong National University, 599-1 Daeyeon 3-dong, Nam-gu, Busan 608-737, Republic of Korea
*Correspondence e-mail: uklee@pknu.ac.kr
In the title compound, C16H13IO3S, the dihedral angle between the planes of the benzofuran ring system [r.m.s. deviation = 0.015 (2) Å] and the 4-methylphenyl ring is 70.35 (5)°. In the crystal, molecules are linked by pairs of π–π interactions between the furan and benzene rings, with centroid–centroid distances of 3.667 (3) and 3.701 (3) Å. The molecules stack along the a-axis direction. In addition, pairs of C—H⋯O hydrogen bonds between inversion-related dimers [which generate R22(10) loops] and a short I⋯I [3.7534 (3) Å] contact are observed.
Keywords: crystal structure; benzofuran; 4-methylphenyl; π–π interactions; C—H⋯O hydrogen bonds; I⋯I interactions.
CCDC reference: 1019339
1. Related literature
For a related structure and background to benzofuran derivatives, see: Choi & Lee (2014). For further synthetic details, see: Choi et al. (1999).
2. Experimental
2.1. Crystal data
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2.3. Refinement
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Data collection: APEX2 (Bruker, 2009); cell SAINT (Bruker, 2009); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012) and DIAMOND (Brandenburg, 1998); software used to prepare material for publication: SHELXL97.
Supporting information
CCDC reference: 1019339
10.1107/S1600536814018510/hb7273sup1.cif
contains datablock I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536814018510/hb7273Isup2.hkl
Supporting information file. DOI: 10.1107/S1600536814018510/hb7273Isup3.cml
The starting material 5-iodo-2-methyl-3-(4-methylphenylsulfanyl)-1-benzofuran was prepared by literature method (Choi et al. 1999). 3-Chloroperoxybenzoic acid (77%, 448 mg, 2.0 mmol) was added in small portions to a stirred solution of 5-iodo-2-methyl-3-(4-methylphenylsulfanyl)-1-benzofuran (342 mg, 0.9 mmol) in dichloromethane (30 ml) at 273 K. After being stirred at room temperature for 10h, the mixture was washed with saturated sodium bicarbonate solution (2 × 20 ml) and the organic layer was separated, dried over magnesium sulfate, filtered and concentrated at reduced pressure. The residue was purified by
(hexane–ethyl acetate, 4:1 v/v) to afford the title compound as a colorless solid [yield 69% (284 mg); m.p. 461–462 K; Rf = 0.51 (hexane–ethyl acetate, 4:1 v/v)]. Colourless blocks were prepared by slow evaporation of a solution of the title compound (22 mg) in ethtyl acetate (10 ml) at room temperature.All H atoms were positioned geometrically and refined using a riding model, with C—H = 0.95 Å for aryl and 0.98 Å for methyl H atoms, Uiso (H) = 1.2Ueq (C) for aryl and 1.5Ueq (C) for methyl H atoms. The methyl groups were allowed to rotate, but not to tip, to best fit the electron density.
Data collection: APEX2 (Bruker, 2009); cell
SAINT (Bruker, 2009); data reduction: SAINT (Bruker, 2009); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012) and DIAMOND (Brandenburg, 1998); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008).C16H13IO3S | Z = 2 |
Mr = 412.22 | F(000) = 404 |
Triclinic, P1 | Dx = 1.825 Mg m−3 |
Hall symbol: -P 1 | Melting point = 462–461 K |
a = 7.2161 (1) Å | Mo Kα radiation, λ = 0.71073 Å |
b = 10.5267 (2) Å | Cell parameters from 9550 reflections |
c = 11.3442 (2) Å | θ = 3.0–28.4° |
α = 111.540 (1)° | µ = 2.28 mm−1 |
β = 90.882 (1)° | T = 173 K |
γ = 108.760 (1)° | Block, colourless |
V = 750.19 (2) Å3 | 0.45 × 0.37 × 0.33 mm |
Bruker SMART APEXII CCD diffractometer | 3730 independent reflections |
Radiation source: rotating anode | 3508 reflections with I > 2σ(I) |
Graphite multilayer monochromator | Rint = 0.027 |
Detector resolution: 10.0 pixels mm-1 | θmax = 28.4°, θmin = 2.0° |
ϕ and ω scans | h = −8→9 |
Absorption correction: multi-scan (SADABS; Bruker, 2009) | k = −14→12 |
Tmin = 0.427, Tmax = 0.520 | l = −15→15 |
13690 measured reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.023 | Hydrogen site location: difference Fourier map |
wR(F2) = 0.059 | H-atom parameters constrained |
S = 1.09 | w = 1/[σ2(Fo2) + (0.0251P)2 + 0.4508P] where P = (Fo2 + 2Fc2)/3 |
3730 reflections | (Δ/σ)max < 0.001 |
192 parameters | Δρmax = 0.53 e Å−3 |
0 restraints | Δρmin = −0.82 e Å−3 |
C16H13IO3S | γ = 108.760 (1)° |
Mr = 412.22 | V = 750.19 (2) Å3 |
Triclinic, P1 | Z = 2 |
a = 7.2161 (1) Å | Mo Kα radiation |
b = 10.5267 (2) Å | µ = 2.28 mm−1 |
c = 11.3442 (2) Å | T = 173 K |
α = 111.540 (1)° | 0.45 × 0.37 × 0.33 mm |
β = 90.882 (1)° |
Bruker SMART APEXII CCD diffractometer | 3730 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2009) | 3508 reflections with I > 2σ(I) |
Tmin = 0.427, Tmax = 0.520 | Rint = 0.027 |
13690 measured reflections |
R[F2 > 2σ(F2)] = 0.023 | 0 restraints |
wR(F2) = 0.059 | H-atom parameters constrained |
S = 1.09 | Δρmax = 0.53 e Å−3 |
3730 reflections | Δρmin = −0.82 e Å−3 |
192 parameters |
Experimental. 1H NMR (δ p.p.m., CDCl3, 400 Hz): 8.23 (s, 1H), 7.87 (d, J = 8.56 Hz, 2H), 7.58 (dd, J = 8.56 and 1.72 Hz, 1H), 7.32 (d, J = 8.20 Hz, 2H), 7.17 (d, J = 8.56 Hz, 1H), 2.78 (s, 3H), 2.40 (s, 3H). |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
I1 | 0.34881 (2) | 0.005191 (17) | 0.133697 (13) | 0.03924 (6) | |
S1 | 0.51630 (7) | 0.39711 (5) | 0.72563 (4) | 0.02485 (10) | |
O1 | 0.1860 (2) | −0.00618 (16) | 0.66250 (15) | 0.0303 (3) | |
O2 | 0.6298 (2) | 0.41551 (16) | 0.62596 (13) | 0.0302 (3) | |
O3 | 0.6169 (2) | 0.43950 (18) | 0.85197 (14) | 0.0346 (3) | |
C1 | 0.3716 (3) | 0.2132 (2) | 0.66867 (18) | 0.0245 (4) | |
C2 | 0.3274 (3) | 0.1121 (2) | 0.53672 (18) | 0.0236 (4) | |
C3 | 0.3694 (3) | 0.1210 (2) | 0.41971 (19) | 0.0257 (4) | |
H3 | 0.4451 | 0.2108 | 0.4148 | 0.031* | |
C4 | 0.2959 (3) | −0.0065 (2) | 0.31154 (19) | 0.0283 (4) | |
C5 | 0.1880 (3) | −0.1412 (2) | 0.3154 (2) | 0.0329 (4) | |
H5 | 0.1444 | −0.2267 | 0.2386 | 0.040* | |
C6 | 0.1449 (3) | −0.1498 (2) | 0.4313 (2) | 0.0326 (4) | |
H6 | 0.0707 | −0.2398 | 0.4364 | 0.039* | |
C7 | 0.2144 (3) | −0.0220 (2) | 0.5385 (2) | 0.0268 (4) | |
C8 | 0.2817 (3) | 0.1378 (2) | 0.7397 (2) | 0.0281 (4) | |
C9 | 0.2619 (3) | 0.1795 (3) | 0.8770 (2) | 0.0365 (5) | |
H9A | 0.3626 | 0.2751 | 0.9271 | 0.055* | |
H9B | 0.2802 | 0.1066 | 0.9058 | 0.055* | |
H9C | 0.1299 | 0.1844 | 0.8893 | 0.055* | |
C10 | 0.3497 (3) | 0.4906 (2) | 0.73988 (18) | 0.0248 (4) | |
C11 | 0.3006 (3) | 0.5246 (2) | 0.63922 (19) | 0.0288 (4) | |
H11 | 0.3530 | 0.4950 | 0.5615 | 0.035* | |
C12 | 0.1741 (3) | 0.6022 (2) | 0.6538 (2) | 0.0328 (4) | |
H12 | 0.1422 | 0.6274 | 0.5858 | 0.039* | |
C13 | 0.0926 (3) | 0.6441 (2) | 0.7656 (2) | 0.0309 (4) | |
C14 | 0.1398 (3) | 0.6056 (2) | 0.8638 (2) | 0.0345 (5) | |
H14 | 0.0825 | 0.6315 | 0.9399 | 0.041* | |
C15 | 0.2688 (3) | 0.5302 (2) | 0.85277 (19) | 0.0317 (4) | |
H15 | 0.3016 | 0.5059 | 0.9211 | 0.038* | |
C16 | −0.0386 (4) | 0.7339 (2) | 0.7832 (3) | 0.0412 (5) | |
H16A | 0.0429 | 0.8378 | 0.8215 | 0.062* | |
H16B | −0.1335 | 0.7112 | 0.8399 | 0.062* | |
H16C | −0.1104 | 0.7110 | 0.6998 | 0.062* |
U11 | U22 | U33 | U12 | U13 | U23 | |
I1 | 0.04516 (10) | 0.04799 (10) | 0.02485 (8) | 0.02137 (7) | 0.00481 (6) | 0.01037 (6) |
S1 | 0.0240 (2) | 0.0273 (2) | 0.0206 (2) | 0.00442 (17) | 0.00161 (17) | 0.01065 (18) |
O1 | 0.0292 (7) | 0.0299 (7) | 0.0393 (8) | 0.0103 (6) | 0.0085 (6) | 0.0220 (6) |
O2 | 0.0286 (7) | 0.0306 (7) | 0.0267 (7) | 0.0034 (6) | 0.0067 (6) | 0.0122 (6) |
O3 | 0.0315 (7) | 0.0426 (8) | 0.0248 (7) | 0.0068 (6) | −0.0035 (6) | 0.0135 (6) |
C1 | 0.0223 (8) | 0.0273 (9) | 0.0269 (9) | 0.0090 (7) | 0.0047 (7) | 0.0137 (8) |
C2 | 0.0197 (8) | 0.0248 (9) | 0.0292 (9) | 0.0091 (7) | 0.0029 (7) | 0.0128 (7) |
C3 | 0.0245 (9) | 0.0259 (9) | 0.0277 (9) | 0.0085 (7) | 0.0032 (7) | 0.0119 (8) |
C4 | 0.0269 (9) | 0.0314 (10) | 0.0281 (10) | 0.0144 (8) | 0.0017 (7) | 0.0100 (8) |
C5 | 0.0312 (10) | 0.0265 (10) | 0.0369 (11) | 0.0121 (8) | −0.0046 (8) | 0.0065 (8) |
C6 | 0.0278 (10) | 0.0237 (9) | 0.0472 (12) | 0.0083 (8) | 0.0008 (9) | 0.0158 (9) |
C7 | 0.0224 (8) | 0.0287 (9) | 0.0355 (10) | 0.0106 (7) | 0.0043 (7) | 0.0182 (8) |
C8 | 0.0256 (9) | 0.0328 (10) | 0.0335 (10) | 0.0126 (8) | 0.0057 (8) | 0.0192 (8) |
C9 | 0.0394 (12) | 0.0470 (13) | 0.0352 (11) | 0.0175 (10) | 0.0129 (9) | 0.0269 (10) |
C10 | 0.0285 (9) | 0.0209 (8) | 0.0216 (8) | 0.0046 (7) | 0.0016 (7) | 0.0084 (7) |
C11 | 0.0320 (10) | 0.0302 (10) | 0.0222 (9) | 0.0064 (8) | 0.0042 (7) | 0.0120 (8) |
C12 | 0.0351 (11) | 0.0312 (10) | 0.0325 (11) | 0.0065 (8) | 0.0004 (8) | 0.0176 (9) |
C13 | 0.0280 (9) | 0.0198 (9) | 0.0388 (11) | 0.0024 (7) | 0.0036 (8) | 0.0103 (8) |
C14 | 0.0426 (12) | 0.0287 (10) | 0.0300 (10) | 0.0121 (9) | 0.0111 (9) | 0.0094 (8) |
C15 | 0.0427 (11) | 0.0307 (10) | 0.0212 (9) | 0.0113 (9) | 0.0047 (8) | 0.0111 (8) |
C16 | 0.0402 (12) | 0.0277 (11) | 0.0558 (15) | 0.0123 (9) | 0.0077 (11) | 0.0161 (10) |
I1—C4 | 2.099 (2) | C8—C9 | 1.478 (3) |
I1—I1i | 3.7534 (3) | C9—H9A | 0.9800 |
S1—O3 | 1.4389 (14) | C9—H9B | 0.9800 |
S1—O2 | 1.4400 (14) | C9—H9C | 0.9800 |
S1—C1 | 1.737 (2) | C10—C11 | 1.388 (3) |
S1—C10 | 1.758 (2) | C10—C15 | 1.394 (3) |
O1—C8 | 1.369 (3) | C11—C12 | 1.383 (3) |
O1—C7 | 1.381 (3) | C11—H11 | 0.9500 |
C1—C8 | 1.362 (3) | C12—C13 | 1.388 (3) |
C1—C2 | 1.439 (3) | C12—H12 | 0.9500 |
C2—C7 | 1.393 (3) | C13—C14 | 1.389 (3) |
C2—C3 | 1.396 (3) | C13—C16 | 1.507 (3) |
C3—C4 | 1.379 (3) | C14—C15 | 1.384 (3) |
C3—H3 | 0.9500 | C14—H14 | 0.9500 |
C4—C5 | 1.398 (3) | C15—H15 | 0.9500 |
C5—C6 | 1.384 (3) | C16—H16A | 0.9800 |
C5—H5 | 0.9500 | C16—H16B | 0.9800 |
C6—C7 | 1.374 (3) | C16—H16C | 0.9800 |
C6—H6 | 0.9500 | ||
C4—I1—I1i | 152.81 (5) | O1—C8—C9 | 115.80 (17) |
O3—S1—O2 | 119.63 (9) | C8—C9—H9A | 109.5 |
O3—S1—C1 | 108.45 (10) | C8—C9—H9B | 109.5 |
O2—S1—C1 | 106.07 (9) | H9A—C9—H9B | 109.5 |
O3—S1—C10 | 107.93 (10) | C8—C9—H9C | 109.5 |
O2—S1—C10 | 108.10 (9) | H9A—C9—H9C | 109.5 |
C1—S1—C10 | 105.86 (9) | H9B—C9—H9C | 109.5 |
C8—O1—C7 | 107.15 (15) | C11—C10—C15 | 120.7 (2) |
C8—C1—C2 | 107.56 (17) | C11—C10—S1 | 119.87 (16) |
C8—C1—S1 | 126.69 (16) | C15—C10—S1 | 119.40 (16) |
C2—C1—S1 | 125.74 (14) | C12—C11—C10 | 118.98 (19) |
C7—C2—C3 | 119.25 (18) | C12—C11—H11 | 120.5 |
C7—C2—C1 | 105.06 (17) | C10—C11—H11 | 120.5 |
C3—C2—C1 | 135.69 (17) | C11—C12—C13 | 121.5 (2) |
C4—C3—C2 | 116.96 (18) | C11—C12—H12 | 119.3 |
C4—C3—H3 | 121.5 | C13—C12—H12 | 119.3 |
C2—C3—H3 | 121.5 | C12—C13—C14 | 118.5 (2) |
C3—C4—C5 | 123.1 (2) | C12—C13—C16 | 121.3 (2) |
C3—C4—I1 | 117.72 (15) | C14—C13—C16 | 120.1 (2) |
C5—C4—I1 | 119.19 (15) | C15—C14—C13 | 121.3 (2) |
C6—C5—C4 | 119.9 (2) | C15—C14—H14 | 119.4 |
C6—C5—H5 | 120.0 | C13—C14—H14 | 119.4 |
C4—C5—H5 | 120.0 | C14—C15—C10 | 118.99 (19) |
C7—C6—C5 | 116.79 (19) | C14—C15—H15 | 120.5 |
C7—C6—H6 | 121.6 | C10—C15—H15 | 120.5 |
C5—C6—H6 | 121.6 | C13—C16—H16A | 109.5 |
C6—C7—O1 | 126.11 (18) | C13—C16—H16B | 109.5 |
C6—C7—C2 | 123.91 (19) | H16A—C16—H16B | 109.5 |
O1—C7—C2 | 109.97 (17) | C13—C16—H16C | 109.5 |
C1—C8—O1 | 110.23 (18) | H16A—C16—H16C | 109.5 |
C1—C8—C9 | 133.9 (2) | H16B—C16—H16C | 109.5 |
O3—S1—C1—C8 | 31.6 (2) | C3—C2—C7—O1 | −178.42 (16) |
O2—S1—C1—C8 | 161.28 (18) | C1—C2—C7—O1 | 1.1 (2) |
C10—S1—C1—C8 | −84.0 (2) | C2—C1—C8—O1 | 1.4 (2) |
O3—S1—C1—C2 | −147.56 (17) | S1—C1—C8—O1 | −177.87 (14) |
O2—S1—C1—C2 | −17.9 (2) | C2—C1—C8—C9 | −176.3 (2) |
C10—S1—C1—C2 | 96.83 (18) | S1—C1—C8—C9 | 4.4 (4) |
C8—C1—C2—C7 | −1.5 (2) | C7—O1—C8—C1 | −0.7 (2) |
S1—C1—C2—C7 | 177.78 (15) | C7—O1—C8—C9 | 177.42 (17) |
C8—C1—C2—C3 | 177.9 (2) | O3—S1—C10—C11 | 151.02 (16) |
S1—C1—C2—C3 | −2.8 (3) | O2—S1—C10—C11 | 20.28 (18) |
C7—C2—C3—C4 | −0.5 (3) | C1—S1—C10—C11 | −93.02 (17) |
C1—C2—C3—C4 | −179.8 (2) | O3—S1—C10—C15 | −28.79 (18) |
C2—C3—C4—C5 | −1.6 (3) | O2—S1—C10—C15 | −159.52 (15) |
C2—C3—C4—I1 | 178.02 (14) | C1—S1—C10—C15 | 87.17 (17) |
I1i—I1—C4—C3 | 89.06 (19) | C15—C10—C11—C12 | 1.8 (3) |
I1i—I1—C4—C5 | −91.27 (19) | S1—C10—C11—C12 | −178.00 (15) |
C3—C4—C5—C6 | 2.3 (3) | C10—C11—C12—C13 | −1.3 (3) |
I1—C4—C5—C6 | −177.38 (15) | C11—C12—C13—C14 | −0.4 (3) |
C4—C5—C6—C7 | −0.6 (3) | C11—C12—C13—C16 | 177.49 (19) |
C5—C6—C7—O1 | 179.13 (19) | C12—C13—C14—C15 | 1.5 (3) |
C5—C6—C7—C2 | −1.5 (3) | C16—C13—C14—C15 | −176.3 (2) |
C8—O1—C7—C6 | 179.2 (2) | C13—C14—C15—C10 | −1.0 (3) |
C8—O1—C7—C2 | −0.3 (2) | C11—C10—C15—C14 | −0.7 (3) |
C3—C2—C7—C6 | 2.1 (3) | S1—C10—C15—C14 | 179.13 (16) |
C1—C2—C7—C6 | −178.35 (19) |
Symmetry code: (i) −x+1, −y, −z. |
D—H···A | D—H | H···A | D···A | D—H···A |
C15—H15···O3ii | 0.95 | 2.44 | 3.311 (2) | 153 |
Symmetry code: (ii) −x+1, −y+1, −z+2. |
D—H···A | D—H | H···A | D···A | D—H···A |
C15—H15···O3i | 0.95 | 2.44 | 3.311 (2) | 153 |
Symmetry code: (i) −x+1, −y+1, −z+2. |
Acknowledgements
The X-ray centre of the Gyeongsang National University is acknowledged for providing access to the single-crystal diffractometer.
References
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As part of our ongoing program of benzofuran derivatives (Choi & Lee, 2014), we report herein on the crystal structure of the title compound.
In the title molecule (Fig. 1), the benzofuran unit is essentially planar, with a mean deviation of 0.015 (2) Å from the least-squares plane defined by the nine constituent atoms. The 4-methylphenyl ring is essentially planar, with a mean deviation of 0.007 (2) Å from the least-squares plane defined by the six constituent atoms. The dihedral angle formed by the benzofuran ring and the 4-methylphenyl ring is 70.35 (5)°. In the crystal structure (Fig. 2), molecules are linked by pairs of π–π interactions between the furan and benzene rings of neighbouring molecules. The molecules stack along the a-axis direction. The relevant centroid names for π–π stacking interactions are Cg1 for furan ring (C1/C2/C7/O1/C8) and Cg2 for the benzene ring (C2–C7). The centroid–centroid separations of Cg1···Cg2iii and Cg1···Cg2iv are 3.667 (3) and 3.701 (3) Å, respectively. The symmetry codes are: (iii) - x, - y, - z + 1; (iv) - x + 1, - y, - z + 1. The slippages of Cg1···Cg2iii and Cg1···Cg2iv are 1.379 (3) and 1.090 (3) Å, respectively. In the crystal (Fig. 2), C—H···O hydrogen bonds (Table 1) between inversion-related dimers and short I1···I1ii [3.7534 (3) Å] contacts are observed.