organic compounds
of 8-hydroxyquinoline: a new monoclinic polymorph
aDepartment of Chemistry & Biology, New Mexico Highlands University, 803 University Avenue, Las Vegas, NM 87701, USA, and bX-Ray Structural Centre, A.N. Nesmeyanov Institute of Organoelement Compounds, Russian Academy of Sciences, 28 Vavilov Street, B-334, Moscow 119991, Russian Federation
*Correspondence e-mail: lcastaneda3@live.nmhu.edu
In an attempt to grow 8-hydroxyquinoline–acetaminophen co-crystals from equimolar amounts of conformers in a chloroform–ethanol solvent mixture at room temperature, the title compound, C9H7NO, was obtained. The molecule is planar, with the hydroxy H atom forming an intramolecular O—H⋯N hydrogen bond. In the crystal, molecules form centrosymmetric dimers via two O—H⋯N hydrogen bonds. Thus, the hydroxy H atoms are involved in bifurcated O—H⋯N hydrogen bonds, leading to the formation of a central planar four-membered N2H2 ring. The dimers are bound by intermolecular π–π stacking [the shortest C⋯C distance is 3.2997 (17) Å] and C—H⋯π interactions into a three-dimensional framework. The crystal grown represents a new monoclinic polymorph in the P21/n. The molecular structure of the present monoclinic polymorph is very similar to that of the orthorhombic polymorph (space group Fdd2) studied previously [Roychowdhury et al. (1978). Acta Cryst. B34, 1047–1048; Banerjee & Saha (1986). Acta Cryst. C42, 1408–1411]. The structures of the two polymorphs are distinguished by the different geometries of the hydrogen-bonded dimers, which in the crystal of the orthorhombic polymorph possess twofold axis symmetry, with the central N2H2 ring adopting a butterfly conformation.
Keywords: 8-hydroxyquinoline; hydrogen bonds; polymorphism; crystal structure.
CCDC reference: 1013310
1. Related literature
For general background on cocrystallization of organic compounds, see: Bernstein (2002); Desiraju (2003); Dunitz (2003); Timofeeva et al. (2003); Aakeröy et al. (2009); Lemmerer et al. (2011). For cocrystallization of 8-hydroxyquinoline with different molecules, see: Prout & Wheeler (1967); Castellano & Prout (1971); Liu & Meng (2006); Westcott et al. (2009). For of the orthorhombic polymorph of 8-hydroxyquinoline, see: Roychowdhury et al. (1978); Banerjee & Saha (1986).
2. Experimental
2.1. Crystal data
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2.3. Refinement
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Data collection: APEX2 (Bruker, 2005); cell SAINT (Bruker, 2001); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL.
Supporting information
CCDC reference: 1013310
10.1107/S1600536814016110/rk2430sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536814016110/rk2430Isup2.hkl
Supporting information file. DOI: 10.1107/S1600536814016110/rk2430Isup3.cml
8-Hydroxiquinoline and acetaminophen were purchased from Matheson Coleman & Bell and Aldrich, respectively, and used without any further purification. 8-Hydroxyquinoline (4 mg, 27.5 mmol) and acetaminophen (4.16 mg, 27.5 mmol) were dissolved in a 1:1 chloroform–ethanol solvent mixture (3 mL). The single crystals of I were obtained by slow evaporation of the solvents at room temperature.
The hydrogen atom of the hydroxy group was localized in the difference–Fourier maps and refined isotropically with fixed displacement parameters (Uiso(H) = 1.5Ueq(O)). The other hydrogen atoms were placed in calculated positions with C—H = 0.95 Å and refined within the riding model with fixed isotropic displacement parameters Uiso(H) = 1.2Ueq(C).
Data collection: APEX2 (Bruker, 2005); cell
SAINT (Bruker, 2001); data reduction: SAINT (Bruker, 2001); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).C9H7NO | F(000) = 304 |
Mr = 145.16 | Dx = 1.423 Mg m−3 |
Monoclinic, P21/n | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2yn | Cell parameters from 2841 reflections |
a = 6.620 (3) Å | θ = 4.2–34.9° |
b = 9.243 (4) Å | µ = 0.09 mm−1 |
c = 11.070 (4) Å | T = 100 K |
β = 90.718 (6)° | Prism, colourless |
V = 677.3 (5) Å3 | 0.30 × 0.25 × 0.20 mm |
Z = 4 |
Bruker APEXII CCD diffractometer | 1795 independent reflections |
Radiation source: fine–focus sealed tube | 1494 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.023 |
ϕ and ω scans | θmax = 29.0°, θmin = 4.2° |
Absorption correction: multi-scan (SADABS; Bruker, 2003) | h = −9→9 |
Tmin = 0.972, Tmax = 0.981 | k = −12→12 |
7049 measured reflections | l = −15→15 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.039 | Hydrogen site location: difference Fourier map |
wR(F2) = 0.109 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.08 | w = 1/[σ2(Fo2) + (0.0558P)2 + 0.1943P] where P = (Fo2 + 2Fc2)/3 |
1795 reflections | (Δ/σ)max = 0.001 |
103 parameters | Δρmax = 0.39 e Å−3 |
0 restraints | Δρmin = −0.20 e Å−3 |
C9H7NO | V = 677.3 (5) Å3 |
Mr = 145.16 | Z = 4 |
Monoclinic, P21/n | Mo Kα radiation |
a = 6.620 (3) Å | µ = 0.09 mm−1 |
b = 9.243 (4) Å | T = 100 K |
c = 11.070 (4) Å | 0.30 × 0.25 × 0.20 mm |
β = 90.718 (6)° |
Bruker APEXII CCD diffractometer | 1795 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2003) | 1494 reflections with I > 2σ(I) |
Tmin = 0.972, Tmax = 0.981 | Rint = 0.023 |
7049 measured reflections |
R[F2 > 2σ(F2)] = 0.039 | 0 restraints |
wR(F2) = 0.109 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.08 | Δρmax = 0.39 e Å−3 |
1795 reflections | Δρmin = −0.20 e Å−3 |
103 parameters |
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R–factor wR and goodness of fit S are based on F2, conventional R–factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R–factors(gt) etc. and is not relevant to the choice of reflections for refinement. R–factors based on F2 are statistically about twice as large as those based on F, and R–factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
O1 | 0.34421 (12) | 0.32417 (9) | 1.07956 (7) | 0.0200 (2) | |
H1 | 0.423 (2) | 0.3920 (19) | 1.0538 (14) | 0.030* | |
N1 | 0.32084 (13) | 0.48141 (10) | 0.86794 (8) | 0.0156 (2) | |
C2 | 0.30597 (17) | 0.55312 (12) | 0.76494 (10) | 0.0176 (2) | |
H2 | 0.4192 | 0.6081 | 0.7398 | 0.021* | |
C3 | 0.13175 (17) | 0.55296 (12) | 0.68997 (10) | 0.0180 (2) | |
H3 | 0.1291 | 0.6066 | 0.6168 | 0.022* | |
C4 | −0.03295 (17) | 0.47463 (11) | 0.72420 (10) | 0.0166 (2) | |
H4 | −0.1519 | 0.4741 | 0.6753 | 0.020* | |
C4A | −0.02507 (15) | 0.39431 (11) | 0.83296 (9) | 0.0139 (2) | |
C5 | −0.18735 (16) | 0.30848 (11) | 0.87370 (10) | 0.0161 (2) | |
H5 | −0.3103 | 0.3046 | 0.8286 | 0.019* | |
C6 | −0.16632 (16) | 0.23086 (12) | 0.97870 (10) | 0.0168 (2) | |
H6 | −0.2752 | 0.1726 | 1.0054 | 0.020* | |
C7 | 0.01393 (16) | 0.23605 (12) | 1.04765 (9) | 0.0159 (2) | |
H7 | 0.0260 | 0.1805 | 1.1196 | 0.019* | |
C8 | 0.17237 (16) | 0.32095 (11) | 1.01141 (9) | 0.0146 (2) | |
C8A | 0.15734 (15) | 0.40160 (11) | 0.90195 (9) | 0.0131 (2) |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.0147 (4) | 0.0215 (4) | 0.0238 (4) | −0.0034 (3) | −0.0053 (3) | 0.0075 (3) |
N1 | 0.0139 (4) | 0.0140 (4) | 0.0190 (5) | 0.0000 (3) | 0.0010 (3) | −0.0005 (3) |
C2 | 0.0170 (5) | 0.0162 (5) | 0.0198 (5) | −0.0027 (4) | 0.0025 (4) | 0.0002 (4) |
C3 | 0.0230 (6) | 0.0165 (5) | 0.0147 (5) | −0.0010 (4) | −0.0002 (4) | 0.0016 (4) |
C4 | 0.0180 (5) | 0.0160 (5) | 0.0158 (5) | 0.0002 (4) | −0.0032 (4) | −0.0011 (4) |
C4A | 0.0139 (5) | 0.0126 (5) | 0.0152 (5) | 0.0005 (4) | 0.0002 (4) | −0.0021 (4) |
C5 | 0.0134 (5) | 0.0173 (5) | 0.0175 (5) | −0.0016 (4) | −0.0011 (4) | −0.0019 (4) |
C6 | 0.0147 (5) | 0.0168 (5) | 0.0190 (5) | −0.0031 (4) | 0.0020 (4) | −0.0013 (4) |
C7 | 0.0168 (5) | 0.0156 (5) | 0.0154 (5) | 0.0004 (4) | 0.0002 (4) | 0.0013 (4) |
C8 | 0.0133 (5) | 0.0138 (5) | 0.0166 (5) | 0.0017 (4) | −0.0017 (4) | −0.0015 (4) |
C8A | 0.0122 (5) | 0.0115 (4) | 0.0157 (5) | 0.0012 (3) | 0.0008 (4) | −0.0021 (4) |
O1—C8 | 1.3575 (13) | C4A—C5 | 1.4139 (15) |
O1—H1 | 0.865 (17) | C4A—C8A | 1.4224 (14) |
N1—C2 | 1.3214 (14) | C5—C6 | 1.3716 (16) |
N1—C8A | 1.3667 (14) | C5—H5 | 0.9500 |
C2—C3 | 1.4125 (16) | C6—C7 | 1.4093 (15) |
C2—H2 | 0.9500 | C6—H6 | 0.9500 |
C3—C4 | 1.3664 (16) | C7—C8 | 1.3739 (15) |
C3—H3 | 0.9500 | C7—H7 | 0.9500 |
C4—C4A | 1.4149 (15) | C8—C8A | 1.4250 (15) |
C4—H4 | 0.9500 | ||
C8—O1—H1 | 109.6 (10) | C6—C5—H5 | 120.2 |
C2—N1—C8A | 117.24 (9) | C4A—C5—H5 | 120.2 |
N1—C2—C3 | 123.92 (10) | C5—C6—C7 | 121.16 (10) |
N1—C2—H2 | 118.0 | C5—C6—H6 | 119.4 |
C3—C2—H2 | 118.0 | C7—C6—H6 | 119.4 |
C4—C3—C2 | 119.09 (10) | C8—C7—C6 | 120.38 (10) |
C4—C3—H3 | 120.5 | C8—C7—H7 | 119.8 |
C2—C3—H3 | 120.5 | C6—C7—H7 | 119.8 |
C3—C4—C4A | 119.54 (10) | O1—C8—C7 | 119.19 (10) |
C3—C4—H4 | 120.2 | O1—C8—C8A | 120.68 (9) |
C4A—C4—H4 | 120.2 | C7—C8—C8A | 120.11 (9) |
C5—C4A—C4 | 123.08 (10) | N1—C8A—C4A | 123.20 (9) |
C5—C4A—C8A | 119.91 (10) | N1—C8A—C8 | 118.01 (9) |
C4—C4A—C8A | 117.01 (9) | C4A—C8A—C8 | 118.79 (9) |
C6—C5—C4A | 119.63 (10) | ||
C8A—N1—C2—C3 | 0.76 (16) | C2—N1—C8A—C4A | −0.76 (15) |
N1—C2—C3—C4 | −0.05 (17) | C2—N1—C8A—C8 | 178.60 (9) |
C2—C3—C4—C4A | −0.66 (16) | C5—C4A—C8A—N1 | 179.57 (9) |
C3—C4—C4A—C5 | −178.83 (10) | C4—C4A—C8A—N1 | 0.07 (15) |
C3—C4—C4A—C8A | 0.64 (15) | C5—C4A—C8A—C8 | 0.21 (14) |
C4—C4A—C5—C6 | 178.39 (10) | C4—C4A—C8A—C8 | −179.28 (9) |
C8A—C4A—C5—C6 | −1.07 (15) | O1—C8—C8A—N1 | 0.19 (15) |
C4A—C5—C6—C7 | 0.60 (16) | C7—C8—C8A—N1 | −178.25 (9) |
C5—C6—C7—C8 | 0.77 (16) | O1—C8—C8A—C4A | 179.58 (9) |
C6—C7—C8—O1 | 179.90 (9) | C7—C8—C8A—C4A | 1.14 (15) |
C6—C7—C8—C8A | −1.63 (16) |
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1···N1 | 0.865 (17) | 2.310 (15) | 2.7596 (15) | 112.5 (12) |
O1—H1···N1i | 0.865 (17) | 2.228 (17) | 2.9072 (14) | 135.3 (13) |
Symmetry code: (i) −x+1, −y+1, −z+2. |
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1···N1 | 0.865 (17) | 2.310 (15) | 2.7596 (15) | 112.5 (12) |
O1—H1···N1i | 0.865 (17) | 2.228 (17) | 2.9072 (14) | 135.3 (13) |
Symmetry code: (i) −x+1, −y+1, −z+2. |
Acknowledgements
Funding from the US National Science Foundation (PREM DMR-0934212 and IIA-1301346) and the Russian Academy of Sciences in the framework of the program `Theoretical and experimental study of chemical bonding and mechanisms of chemical reactions and processes' is gratefully acknowledged.
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Cocrystallization represents a form of supramolecular synthesis where molecules are linked by non–valent intermolecular interactions without making or breaking covalent bonds (Aakeröy et al., 2009; Lemmerer et al., 2011). Cocrystals are distinctly different from solid solutions or mixed crystals, and can be considered as molecular complexes (Desiraju, 2003; Dunitz, 2003). The ability of organic compounds to form cocrystals is dependent on a range of variables, including the types of co–formers, co–former ratios, solvents, temperature, pressure, crystallization technique etc. A systematic exploration of a combination of relevant variables increases the chance of discovering cocrystals with favourable properties.
In this work we attempted to prepare cocrystals of 8-hydroxyquinoline with acetaminophen by cocrystallization from chloroform–ethanol solvent mixture at room temperature. The structures of several cocrystals with 8-hydroxyquinoline have been already reported (Prout & Wheeler, 1967; Castellano & Prout, 1971; Liu & Meng, 2006; Westcott et al., 2009). Unexpectedly, a new polymorph of 8-hydroxyquinoline, C9H7NO (I), was isolated, and its crystal structure was studied by X–ray diffraction analysis. However, no polymorphs of 8-hydroxyquinoline were found in Cambridge strustural database. The result presented here can be considered as a new example of so called "induced polymorphism" (Bernstein, 2002; Timofeeva et al., 2003).
The molecule of I is planar, with the hydroxyl–H atom forming the intramolecular O—H···N hydrogen bond (Figure 1, Table 1). The crystal grown represents the new monoclinic polymorph in space group P21/n. The molecular structure of the monoclinic polymorph of I is very close to that of the orthorhombic polymorph in space group Fdd2 studied previously (Roychowdhury et al., 1978; Banerjee & Saha, 1986). The structures of the two polymorphs are distinct by the different geometries of supramolecular synthons. In the crystals of the both polymorphs, molecules form dimers by the two intermolecular O—H···N hydrogen bonds. Thus, the hydroxyl–H atoms are involved in the bifurcated O—H···N hydrogen bonds leading to the formation of the central four–membered N2H2–ring (Table 1 for I). However, the dimers in the crystal of the monoclinic polymorph are centrosymmetrical (Ci, the molecules within the dimer are parallel to each other, the central N2H2–ring is planar) (Figure 2), while those in the crystal of the orthorhombic polymorph possess the twofold axis symmetry (C2, the molecules within the dimer are twisted by 52.4° (av.) relative to each other, the central N2H2–ring adopts a butterfly conformation) (Figure 3).
Further, the dimers are bound by the intermolecular π–π stacking (the interplane distance between the mean planes of closest parallel molecules in I is 3.3155 (17) Å) and C—H···π (H2···C4Ai 2.86 Å, H2···C5i 2.87 Å; H3···C8i 2.78 Å, H3···C8Ai 3.08 Å) (in the case of the monoclinic polymorph, Figure 4) or C—H···O (in the case of the orthorhombic polymorph) hydrogen bonding interactions into three–dimensional framework. Symmetry code: (i) 1/2-x, 1/2+y, 3/2-z.