organic compounds
H-fluorene-9-carboxylic acid
of 9-(4-bromobutyl)-9aTianjin Medical University, Tianjin 300070, People's Republic of China, and bTianjin Institute of Pharmaceutical Research, Tianjin 300193, People's Republic of China
*Correspondence e-mail: liudk@tjipr.com
The title compound, C18H17BrO2, is a key intermediate in the synthesis of lomitapide mesylate, a microsomal triglyceride transfer protein inhibitor. Its contains two independent molecules with slightly different conformations; the mean planes of the 4-bromobutyl and carboxylate groups in the two molecules form dihedral angles of 24.54 (12) and 17.10 (18)°. In the crystal, carboxylate groups are involved in O—H⋯O hydrogen bonding, which leads to the formation of two crystallographically independent centrosymmetric dimers. Weak intermolecular C—H⋯O interactions further link these dimers into layers parallel to the bc plane.
Keywords: crystal structure; lomitapide mesylate; hydrogen bonding.
CCDC reference: 1021727
1. Related literature
For background to the bioactivity and applications of the microsomal triglyceride transfer protein inhibitor lomitapide mesylate, see: Stein et al. (2009); Cuchel et al. (2013); Burnett & Watts (2007).
2. Experimental
2.1. Crystal data
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2.3. Refinement
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Data collection: CrystalClear (Rigaku/MSC, 2005); cell CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.
Supporting information
CCDC reference: 1021727
10.1107/S1600536814019564/cv5469sup1.cif
contains datablocks I, New_Global_Publ_Block. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536814019564/cv5469Isup2.hkl
Supporting information file. DOI: 10.1107/S1600536814019564/cv5469Isup3.cml
9-(4-Bromobutyl)-9H-fluorene-9-carboxylic acid 5.0 g (0.024 mol) 9H-fluorene-9-carboxylic acid was dissolved into 120 ml THF at 273 K, a solution of n-butyllithium (2.5 M, 22 ml, 0.055 mol) in THF was dropwised into the mixture and stirred for 1 h. Then 1,4-dibromobutane (3.2 ml, 0.026 mol) was added dropwise over 30 min. The reaction was stirred at 273 K for 30 min. Then the reaction was warmed to room temperature for 30 h. The reaction was extracted with water (3 × 75 ml), the combined aqueous was extracted with 2-methoxy-2-methylpropane (80 ml). The aqueous was made acidic with HCl (1 N, 50 ml), then extracted with dichloromethane (3 × 75 ml), the combined organic layers ere dried over Na2SO4. Evaporation gave 7.0 g yellow solid as crude product. The solid was dissolved in a mixture of petroleum ether (24 ml) and ethyl acetate (4 ml) at 298 K, then white crystals were generated slowly. 1H NMR (400 MHz, DMSO-d6) δ: 12.53 (br s, 1H, COOH), 7.54 (d, J=7.2 Hz, 2H, ArH), 7.68 (d, J=7.2 Hz, 2 H, Ar H), 7.42–7.38 (m, 2H, ArH), 7.35–7.25 (m, 2H, ArH), 3.31 (t, J=13.2 Hz, 2H, CH2), 2.32–2.28 (m, 2H, CH2), 1.65–1.57 (m, 2H, CH2), 0.80–0.72 (m, 2H, CH2).
All the H atoms were geometrically positioned with O—H=0.84 Å, C—H=0.95 Å (aromatic CH) and 0.99 Å (CH2), Uiso = 1.5 or 1.2Ueq(O or C).
Data collection: CrystalClear (Rigaku/MSC, 2005); cell
CrystalClear (Rigaku/MSC, 2005); data reduction: CrystalClear (Rigaku/MSC, 2005); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).Fig. 1. The content of asymmetric unit of (I) showing the atomic numbering and 50% probability displacement ellipsoids. |
C18H17BrO2 | Z = 4 |
Mr = 345.23 | F(000) = 704 |
Triclinic, P1 | Dx = 1.438 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 9.897 (2) Å | Cell parameters from 4642 reflections |
b = 11.800 (2) Å | θ = 1.8–27.9° |
c = 14.202 (3) Å | µ = 2.58 mm−1 |
α = 91.59 (3)° | T = 113 K |
β = 95.32 (3)° | Cubic, colorless |
γ = 104.70 (3)° | 0.20 × 0.18 × 0.12 mm |
V = 1595.1 (6) Å3 |
Rigaku Saturn diffractometer | 7599 independent reflections |
Radiation source: rotating anode | 4010 reflections with I > 2σ(I) |
Confocal monochromator | Rint = 0.056 |
ω scans | θmax = 27.9°, θmin = 1.8° |
Absorption correction: multi-scan (CrystalClear; Rigaku/MSC, 2005) | h = −12→13 |
Tmin = 0.627, Tmax = 0.747 | k = −15→15 |
20422 measured reflections | l = −18→18 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.041 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.092 | H-atom parameters constrained |
S = 0.99 | w = 1/[σ2(Fo2) + (0.0306P)2] where P = (Fo2 + 2Fc2)/3 |
7599 reflections | (Δ/σ)max = 0.001 |
381 parameters | Δρmax = 0.43 e Å−3 |
0 restraints | Δρmin = −1.27 e Å−3 |
C18H17BrO2 | γ = 104.70 (3)° |
Mr = 345.23 | V = 1595.1 (6) Å3 |
Triclinic, P1 | Z = 4 |
a = 9.897 (2) Å | Mo Kα radiation |
b = 11.800 (2) Å | µ = 2.58 mm−1 |
c = 14.202 (3) Å | T = 113 K |
α = 91.59 (3)° | 0.20 × 0.18 × 0.12 mm |
β = 95.32 (3)° |
Rigaku Saturn diffractometer | 7599 independent reflections |
Absorption correction: multi-scan (CrystalClear; Rigaku/MSC, 2005) | 4010 reflections with I > 2σ(I) |
Tmin = 0.627, Tmax = 0.747 | Rint = 0.056 |
20422 measured reflections |
R[F2 > 2σ(F2)] = 0.041 | 0 restraints |
wR(F2) = 0.092 | H-atom parameters constrained |
S = 0.99 | Δρmax = 0.43 e Å−3 |
7599 reflections | Δρmin = −1.27 e Å−3 |
381 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Br1 | 0.38791 (3) | 0.59238 (3) | 0.04660 (2) | 0.03473 (11) | |
Br2 | 0.59649 (4) | −0.07669 (3) | 0.40874 (3) | 0.04780 (13) | |
O1 | 0.0453 (2) | 0.90473 (15) | 0.43181 (12) | 0.0218 (5) | |
O2 | 0.0497 (2) | 1.08986 (16) | 0.39999 (13) | 0.0272 (5) | |
H2 | 0.0155 | 1.0889 | 0.4520 | 0.041* | |
O3 | 0.9568 (2) | 0.57553 (15) | 0.10428 (13) | 0.0242 (5) | |
H3 | 0.9856 | 0.5872 | 0.0507 | 0.036* | |
O4 | 0.96586 (19) | 0.39224 (16) | 0.06820 (12) | 0.0215 (5) | |
C1 | 0.0668 (3) | 0.9857 (2) | 0.37874 (19) | 0.0180 (6) | |
C2 | 0.1092 (3) | 0.9715 (2) | 0.27999 (18) | 0.0171 (6) | |
C3 | −0.0231 (3) | 0.9517 (2) | 0.21020 (19) | 0.0164 (6) | |
C4 | −0.1440 (3) | 0.8610 (2) | 0.2065 (2) | 0.0230 (7) | |
H4 | −0.1528 | 0.8012 | 0.2506 | 0.028* | |
C5 | −0.2520 (3) | 0.8600 (3) | 0.1364 (2) | 0.0299 (8) | |
H5 | −0.3357 | 0.7983 | 0.1319 | 0.036* | |
C6 | −0.2388 (3) | 0.9486 (3) | 0.0728 (2) | 0.0309 (8) | |
H6 | −0.3148 | 0.9474 | 0.0264 | 0.037* | |
C7 | −0.1180 (3) | 1.0380 (3) | 0.07561 (19) | 0.0267 (7) | |
H7 | −0.1094 | 1.0974 | 0.0311 | 0.032* | |
C8 | −0.0079 (3) | 1.0394 (2) | 0.14550 (18) | 0.0177 (6) | |
C9 | 0.1317 (3) | 1.1203 (2) | 0.16555 (19) | 0.0191 (7) | |
C10 | 0.2006 (3) | 1.2164 (2) | 0.1180 (2) | 0.0277 (7) | |
H10 | 0.1554 | 1.2405 | 0.0631 | 0.033* | |
C11 | 0.3360 (3) | 1.2758 (3) | 0.1524 (2) | 0.0339 (8) | |
H11 | 0.3853 | 1.3402 | 0.1198 | 0.041* | |
C12 | 0.4013 (3) | 1.2424 (3) | 0.2345 (2) | 0.0337 (8) | |
H12 | 0.4931 | 1.2860 | 0.2586 | 0.040* | |
C13 | 0.3334 (3) | 1.1463 (2) | 0.2813 (2) | 0.0258 (7) | |
H13 | 0.3786 | 1.1226 | 0.3365 | 0.031* | |
C14 | 0.1997 (3) | 1.0857 (2) | 0.24656 (19) | 0.0179 (6) | |
C15 | 0.1813 (3) | 0.8696 (2) | 0.27546 (18) | 0.0196 (6) | |
H15A | 0.2645 | 0.8865 | 0.3231 | 0.024* | |
H15B | 0.1154 | 0.7964 | 0.2918 | 0.024* | |
C16 | 0.2273 (3) | 0.8515 (2) | 0.17776 (19) | 0.0232 (7) | |
H16A | 0.1447 | 0.8382 | 0.1300 | 0.028* | |
H16B | 0.2960 | 0.9239 | 0.1627 | 0.028* | |
C17 | 0.2932 (3) | 0.7488 (2) | 0.17017 (19) | 0.0216 (7) | |
H17A | 0.3779 | 0.7620 | 0.2161 | 0.026* | |
H17B | 0.2257 | 0.6756 | 0.1850 | 0.026* | |
C18 | 0.3326 (3) | 0.7377 (2) | 0.0703 (2) | 0.0234 (7) | |
H18A | 0.4114 | 0.8055 | 0.0599 | 0.028* | |
H18B | 0.2516 | 0.7398 | 0.0245 | 0.028* | |
C19 | 0.9441 (3) | 0.4653 (2) | 0.12332 (18) | 0.0173 (6) | |
C20 | 0.9030 (3) | 0.4356 (2) | 0.22235 (18) | 0.0163 (6) | |
C21 | 0.8124 (3) | 0.5103 (2) | 0.26096 (18) | 0.0177 (6) | |
C22 | 0.6789 (3) | 0.5146 (2) | 0.2272 (2) | 0.0229 (7) | |
H22 | 0.6345 | 0.4742 | 0.1693 | 0.027* | |
C23 | 0.6111 (3) | 0.5795 (3) | 0.2798 (2) | 0.0315 (8) | |
H23 | 0.5191 | 0.5837 | 0.2575 | 0.038* | |
C24 | 0.6753 (4) | 0.6384 (2) | 0.3645 (2) | 0.0340 (8) | |
H24 | 0.6255 | 0.6800 | 0.4006 | 0.041* | |
C25 | 0.8112 (3) | 0.6373 (2) | 0.3970 (2) | 0.0300 (8) | |
H25 | 0.8563 | 0.6796 | 0.4540 | 0.036* | |
C26 | 0.8800 (3) | 0.5728 (2) | 0.34435 (19) | 0.0202 (7) | |
C27 | 1.0206 (3) | 0.5536 (2) | 0.36167 (19) | 0.0213 (7) | |
C28 | 1.1289 (3) | 0.5984 (3) | 0.4320 (2) | 0.0313 (8) | |
H28 | 1.1192 | 0.6534 | 0.4794 | 0.038* | |
C29 | 1.2500 (4) | 0.5630 (3) | 0.4328 (2) | 0.0372 (8) | |
H29 | 1.3253 | 0.5952 | 0.4802 | 0.045* | |
C30 | 1.2649 (3) | 0.4797 (3) | 0.3648 (2) | 0.0339 (8) | |
H30 | 1.3487 | 0.4541 | 0.3673 | 0.041* | |
C31 | 1.1569 (3) | 0.4349 (3) | 0.2937 (2) | 0.0261 (7) | |
H31 | 1.1665 | 0.3792 | 0.2469 | 0.031* | |
C32 | 1.0353 (3) | 0.4722 (2) | 0.29201 (18) | 0.0174 (6) | |
C33 | 0.8311 (3) | 0.3036 (2) | 0.22100 (18) | 0.0187 (6) | |
H33A | 0.7439 | 0.2866 | 0.1770 | 0.022* | |
H33B | 0.8940 | 0.2594 | 0.1961 | 0.022* | |
C34 | 0.7946 (3) | 0.2601 (2) | 0.31781 (18) | 0.0197 (6) | |
H34A | 0.7332 | 0.3050 | 0.3438 | 0.024* | |
H34B | 0.8818 | 0.2742 | 0.3616 | 0.024* | |
C35 | 0.7200 (3) | 0.1295 (2) | 0.31216 (19) | 0.0202 (7) | |
H35A | 0.6357 | 0.1140 | 0.2656 | 0.024* | |
H35B | 0.7835 | 0.0835 | 0.2907 | 0.024* | |
C36 | 0.6774 (3) | 0.0922 (2) | 0.4085 (2) | 0.0241 (7) | |
H36A | 0.6079 | 0.1337 | 0.4271 | 0.029* | |
H36B | 0.7608 | 0.1151 | 0.4559 | 0.029* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Br1 | 0.0455 (2) | 0.03137 (19) | 0.0336 (2) | 0.02173 (17) | 0.00528 (16) | −0.00455 (15) |
Br2 | 0.0734 (3) | 0.02000 (18) | 0.0541 (3) | 0.00884 (18) | 0.0332 (2) | 0.01456 (16) |
O1 | 0.0330 (12) | 0.0178 (10) | 0.0172 (11) | 0.0085 (9) | 0.0088 (9) | 0.0051 (9) |
O2 | 0.0465 (14) | 0.0209 (11) | 0.0210 (12) | 0.0163 (10) | 0.0155 (11) | 0.0054 (9) |
O3 | 0.0395 (13) | 0.0197 (11) | 0.0137 (11) | 0.0036 (10) | 0.0134 (10) | 0.0048 (9) |
O4 | 0.0307 (12) | 0.0228 (11) | 0.0141 (10) | 0.0096 (10) | 0.0101 (9) | 0.0029 (9) |
C1 | 0.0188 (16) | 0.0206 (15) | 0.0163 (15) | 0.0071 (13) | 0.0039 (13) | 0.0048 (13) |
C2 | 0.0225 (17) | 0.0175 (15) | 0.0143 (15) | 0.0088 (13) | 0.0046 (13) | 0.0061 (12) |
C3 | 0.0196 (16) | 0.0161 (15) | 0.0152 (15) | 0.0070 (13) | 0.0038 (12) | 0.0021 (12) |
C4 | 0.0243 (18) | 0.0231 (16) | 0.0215 (16) | 0.0049 (14) | 0.0043 (14) | 0.0035 (13) |
C5 | 0.0242 (18) | 0.0299 (18) | 0.0324 (19) | 0.0023 (15) | 0.0014 (15) | −0.0035 (15) |
C6 | 0.0304 (19) | 0.041 (2) | 0.0225 (18) | 0.0154 (17) | −0.0065 (15) | −0.0037 (15) |
C7 | 0.038 (2) | 0.0330 (18) | 0.0142 (16) | 0.0183 (16) | 0.0020 (14) | 0.0054 (14) |
C8 | 0.0261 (17) | 0.0177 (15) | 0.0131 (15) | 0.0115 (13) | 0.0054 (13) | 0.0032 (12) |
C9 | 0.0253 (18) | 0.0186 (15) | 0.0196 (16) | 0.0123 (13) | 0.0136 (13) | 0.0066 (12) |
C10 | 0.041 (2) | 0.0217 (16) | 0.0285 (18) | 0.0168 (15) | 0.0164 (16) | 0.0126 (14) |
C11 | 0.032 (2) | 0.0185 (16) | 0.054 (2) | 0.0038 (15) | 0.0239 (18) | 0.0115 (16) |
C12 | 0.0244 (19) | 0.0214 (17) | 0.054 (2) | 0.0011 (14) | 0.0112 (17) | 0.0044 (16) |
C13 | 0.0217 (18) | 0.0260 (17) | 0.0325 (19) | 0.0103 (14) | 0.0046 (15) | 0.0058 (14) |
C14 | 0.0195 (16) | 0.0151 (14) | 0.0225 (16) | 0.0073 (13) | 0.0113 (13) | 0.0035 (12) |
C15 | 0.0243 (17) | 0.0190 (15) | 0.0185 (15) | 0.0091 (13) | 0.0061 (13) | 0.0060 (12) |
C16 | 0.0277 (18) | 0.0244 (16) | 0.0230 (16) | 0.0136 (14) | 0.0099 (14) | 0.0063 (13) |
C17 | 0.0255 (17) | 0.0196 (15) | 0.0218 (16) | 0.0090 (13) | 0.0049 (14) | 0.0005 (13) |
C18 | 0.0265 (18) | 0.0156 (15) | 0.0310 (18) | 0.0099 (13) | 0.0051 (14) | −0.0010 (13) |
C19 | 0.0170 (16) | 0.0195 (15) | 0.0140 (15) | 0.0021 (13) | 0.0009 (12) | 0.0032 (12) |
C20 | 0.0207 (16) | 0.0164 (15) | 0.0111 (14) | 0.0013 (13) | 0.0082 (12) | 0.0008 (12) |
C21 | 0.0250 (17) | 0.0133 (14) | 0.0146 (15) | 0.0016 (13) | 0.0086 (13) | 0.0040 (12) |
C22 | 0.0290 (18) | 0.0192 (15) | 0.0201 (16) | 0.0029 (14) | 0.0081 (14) | 0.0054 (13) |
C23 | 0.034 (2) | 0.0291 (18) | 0.038 (2) | 0.0138 (16) | 0.0166 (17) | 0.0171 (16) |
C24 | 0.054 (2) | 0.0190 (17) | 0.038 (2) | 0.0170 (16) | 0.0279 (18) | 0.0100 (15) |
C25 | 0.051 (2) | 0.0172 (16) | 0.0234 (18) | 0.0083 (16) | 0.0149 (16) | 0.0016 (13) |
C26 | 0.0321 (18) | 0.0114 (14) | 0.0166 (15) | 0.0014 (13) | 0.0105 (14) | 0.0039 (12) |
C27 | 0.0308 (18) | 0.0146 (14) | 0.0151 (15) | −0.0025 (13) | 0.0068 (14) | 0.0045 (12) |
C28 | 0.043 (2) | 0.0282 (18) | 0.0154 (16) | −0.0042 (16) | 0.0020 (15) | 0.0005 (14) |
C29 | 0.036 (2) | 0.045 (2) | 0.0208 (18) | −0.0044 (18) | −0.0052 (15) | 0.0095 (16) |
C30 | 0.0180 (18) | 0.048 (2) | 0.0325 (19) | 0.0017 (16) | 0.0013 (15) | 0.0132 (17) |
C31 | 0.0258 (18) | 0.0309 (18) | 0.0212 (17) | 0.0051 (15) | 0.0064 (14) | 0.0045 (14) |
C32 | 0.0210 (17) | 0.0164 (14) | 0.0125 (14) | −0.0012 (13) | 0.0058 (12) | 0.0033 (12) |
C33 | 0.0235 (17) | 0.0170 (15) | 0.0152 (15) | 0.0021 (13) | 0.0083 (13) | 0.0015 (12) |
C34 | 0.0243 (17) | 0.0190 (15) | 0.0152 (15) | 0.0026 (13) | 0.0058 (13) | 0.0029 (12) |
C35 | 0.0259 (17) | 0.0152 (14) | 0.0201 (16) | 0.0045 (13) | 0.0066 (13) | 0.0056 (12) |
C36 | 0.0298 (18) | 0.0159 (15) | 0.0256 (17) | 0.0017 (13) | 0.0083 (14) | 0.0061 (13) |
Br1—C18 | 1.958 (2) | C17—H17A | 0.9900 |
Br2—C36 | 1.951 (3) | C17—H17B | 0.9900 |
O1—C1 | 1.221 (3) | C18—H18A | 0.9900 |
O2—C1 | 1.314 (3) | C18—H18B | 0.9900 |
O2—H2 | 0.8400 | C19—C20 | 1.525 (3) |
O3—C19 | 1.313 (3) | C20—C32 | 1.525 (4) |
O3—H3 | 0.8400 | C20—C21 | 1.532 (4) |
O4—C19 | 1.221 (3) | C20—C33 | 1.538 (3) |
C1—C2 | 1.517 (3) | C21—C22 | 1.377 (4) |
C2—C3 | 1.530 (4) | C21—C26 | 1.396 (4) |
C2—C14 | 1.531 (3) | C22—C23 | 1.385 (4) |
C2—C15 | 1.549 (3) | C22—H22 | 0.9500 |
C3—C4 | 1.383 (4) | C23—C24 | 1.386 (4) |
C3—C8 | 1.392 (3) | C23—H23 | 0.9500 |
C4—C5 | 1.389 (4) | C24—C25 | 1.384 (4) |
C4—H4 | 0.9500 | C24—H24 | 0.9500 |
C5—C6 | 1.389 (4) | C25—C26 | 1.389 (4) |
C5—H5 | 0.9500 | C25—H25 | 0.9500 |
C6—C7 | 1.376 (4) | C26—C27 | 1.465 (4) |
C6—H6 | 0.9500 | C27—C28 | 1.383 (4) |
C7—C8 | 1.400 (4) | C27—C32 | 1.402 (3) |
C7—H7 | 0.9500 | C28—C29 | 1.364 (4) |
C8—C9 | 1.464 (4) | C28—H28 | 0.9500 |
C9—C10 | 1.394 (4) | C29—C30 | 1.404 (4) |
C9—C14 | 1.402 (4) | C29—H29 | 0.9500 |
C10—C11 | 1.381 (4) | C30—C31 | 1.386 (4) |
C10—H10 | 0.9500 | C30—H30 | 0.9500 |
C11—C12 | 1.396 (4) | C31—C32 | 1.382 (4) |
C11—H11 | 0.9500 | C31—H31 | 0.9500 |
C12—C13 | 1.385 (4) | C33—C34 | 1.524 (3) |
C12—H12 | 0.9500 | C33—H33A | 0.9900 |
C13—C14 | 1.373 (4) | C33—H33B | 0.9900 |
C13—H13 | 0.9500 | C34—C35 | 1.527 (3) |
C15—C16 | 1.526 (3) | C34—H34A | 0.9900 |
C15—H15A | 0.9900 | C34—H34B | 0.9900 |
C15—H15B | 0.9900 | C35—C36 | 1.513 (3) |
C16—C17 | 1.520 (3) | C35—H35A | 0.9900 |
C16—H16A | 0.9900 | C35—H35B | 0.9900 |
C16—H16B | 0.9900 | C36—H36A | 0.9900 |
C17—C18 | 1.517 (3) | C36—H36B | 0.9900 |
C1—O2—H2 | 109.5 | H18A—C18—H18B | 107.9 |
C19—O3—H3 | 109.5 | O4—C19—O3 | 123.7 (2) |
O1—C1—O2 | 123.5 (2) | O4—C19—C20 | 122.1 (2) |
O1—C1—C2 | 122.1 (2) | O3—C19—C20 | 114.2 (2) |
O2—C1—C2 | 114.3 (2) | C19—C20—C32 | 108.3 (2) |
C1—C2—C3 | 107.7 (2) | C19—C20—C21 | 113.9 (2) |
C1—C2—C14 | 112.7 (2) | C32—C20—C21 | 101.4 (2) |
C3—C2—C14 | 101.3 (2) | C19—C20—C33 | 108.3 (2) |
C1—C2—C15 | 109.8 (2) | C32—C20—C33 | 113.0 (2) |
C3—C2—C15 | 112.9 (2) | C21—C20—C33 | 112.0 (2) |
C14—C2—C15 | 112.2 (2) | C22—C21—C26 | 121.1 (2) |
C4—C3—C8 | 121.6 (3) | C22—C21—C20 | 128.5 (2) |
C4—C3—C2 | 127.8 (2) | C26—C21—C20 | 110.3 (2) |
C8—C3—C2 | 110.6 (2) | C21—C22—C23 | 118.3 (3) |
C3—C4—C5 | 118.1 (3) | C21—C22—H22 | 120.8 |
C3—C4—H4 | 120.9 | C23—C22—H22 | 120.8 |
C5—C4—H4 | 120.9 | C22—C23—C24 | 121.0 (3) |
C4—C5—C6 | 120.6 (3) | C22—C23—H23 | 119.5 |
C4—C5—H5 | 119.7 | C24—C23—H23 | 119.5 |
C6—C5—H5 | 119.7 | C25—C24—C23 | 120.7 (3) |
C7—C6—C5 | 121.4 (3) | C25—C24—H24 | 119.6 |
C7—C6—H6 | 119.3 | C23—C24—H24 | 119.6 |
C5—C6—H6 | 119.3 | C24—C25—C26 | 118.5 (3) |
C6—C7—C8 | 118.5 (3) | C24—C25—H25 | 120.8 |
C6—C7—H7 | 120.7 | C26—C25—H25 | 120.8 |
C8—C7—H7 | 120.7 | C25—C26—C21 | 120.3 (3) |
C3—C8—C7 | 119.7 (3) | C25—C26—C27 | 130.7 (3) |
C3—C8—C9 | 109.0 (2) | C21—C26—C27 | 109.1 (2) |
C7—C8—C9 | 131.2 (3) | C28—C27—C32 | 120.1 (3) |
C10—C9—C14 | 120.0 (3) | C28—C27—C26 | 131.5 (3) |
C10—C9—C8 | 131.3 (3) | C32—C27—C26 | 108.4 (2) |
C14—C9—C8 | 108.6 (2) | C29—C28—C27 | 119.4 (3) |
C11—C10—C9 | 118.7 (3) | C29—C28—H28 | 120.3 |
C11—C10—H10 | 120.7 | C27—C28—H28 | 120.3 |
C9—C10—H10 | 120.7 | C28—C29—C30 | 121.0 (3) |
C10—C11—C12 | 120.8 (3) | C28—C29—H29 | 119.5 |
C10—C11—H11 | 119.6 | C30—C29—H29 | 119.5 |
C12—C11—H11 | 119.6 | C31—C30—C29 | 119.8 (3) |
C13—C12—C11 | 120.6 (3) | C31—C30—H30 | 120.1 |
C13—C12—H12 | 119.7 | C29—C30—H30 | 120.1 |
C11—C12—H12 | 119.7 | C32—C31—C30 | 119.1 (3) |
C14—C13—C12 | 118.9 (3) | C32—C31—H31 | 120.4 |
C14—C13—H13 | 120.6 | C30—C31—H31 | 120.4 |
C12—C13—H13 | 120.6 | C31—C32—C27 | 120.5 (3) |
C13—C14—C9 | 121.0 (3) | C31—C32—C20 | 128.9 (3) |
C13—C14—C2 | 128.5 (3) | C27—C32—C20 | 110.7 (2) |
C9—C14—C2 | 110.3 (2) | C34—C33—C20 | 113.8 (2) |
C16—C15—C2 | 112.3 (2) | C34—C33—H33A | 108.8 |
C16—C15—H15A | 109.1 | C20—C33—H33A | 108.8 |
C2—C15—H15A | 109.1 | C34—C33—H33B | 108.8 |
C16—C15—H15B | 109.1 | C20—C33—H33B | 108.8 |
C2—C15—H15B | 109.1 | H33A—C33—H33B | 107.7 |
H15A—C15—H15B | 107.9 | C33—C34—C35 | 111.7 (2) |
C17—C16—C15 | 113.4 (2) | C33—C34—H34A | 109.3 |
C17—C16—H16A | 108.9 | C35—C34—H34A | 109.3 |
C15—C16—H16A | 108.9 | C33—C34—H34B | 109.3 |
C17—C16—H16B | 108.9 | C35—C34—H34B | 109.3 |
C15—C16—H16B | 108.9 | H34A—C34—H34B | 107.9 |
H16A—C16—H16B | 107.7 | C36—C35—C34 | 109.7 (2) |
C18—C17—C16 | 109.0 (2) | C36—C35—H35A | 109.7 |
C18—C17—H17A | 109.9 | C34—C35—H35A | 109.7 |
C16—C17—H17A | 109.9 | C36—C35—H35B | 109.7 |
C18—C17—H17B | 109.9 | C34—C35—H35B | 109.7 |
C16—C17—H17B | 109.9 | H35A—C35—H35B | 108.2 |
H17A—C17—H17B | 108.3 | C35—C36—Br2 | 111.74 (18) |
C17—C18—Br1 | 112.16 (19) | C35—C36—H36A | 109.3 |
C17—C18—H18A | 109.2 | Br2—C36—H36A | 109.3 |
Br1—C18—H18A | 109.2 | C35—C36—H36B | 109.3 |
C17—C18—H18B | 109.2 | Br2—C36—H36B | 109.3 |
Br1—C18—H18B | 109.2 | H36A—C36—H36B | 107.9 |
O1—C1—C2—C3 | 98.5 (3) | O4—C19—C20—C32 | 97.0 (3) |
O2—C1—C2—C3 | −78.8 (3) | O3—C19—C20—C32 | −81.4 (3) |
O1—C1—C2—C14 | −150.7 (3) | O4—C19—C20—C21 | −151.1 (3) |
O2—C1—C2—C14 | 32.1 (3) | O3—C19—C20—C21 | 30.5 (3) |
O1—C1—C2—C15 | −24.8 (4) | O4—C19—C20—C33 | −25.8 (4) |
O2—C1—C2—C15 | 158.0 (2) | O3—C19—C20—C33 | 155.8 (2) |
C1—C2—C3—C4 | −60.8 (3) | C19—C20—C21—C22 | 64.4 (4) |
C14—C2—C3—C4 | −179.3 (2) | C32—C20—C21—C22 | −179.6 (3) |
C15—C2—C3—C4 | 60.6 (3) | C33—C20—C21—C22 | −58.9 (4) |
C1—C2—C3—C8 | 120.0 (2) | C19—C20—C21—C26 | −120.0 (3) |
C14—C2—C3—C8 | 1.5 (3) | C32—C20—C21—C26 | −4.0 (3) |
C15—C2—C3—C8 | −118.7 (2) | C33—C20—C21—C26 | 116.7 (2) |
C8—C3—C4—C5 | −0.7 (4) | C26—C21—C22—C23 | −2.2 (4) |
C2—C3—C4—C5 | −179.8 (3) | C20—C21—C22—C23 | 173.0 (2) |
C3—C4—C5—C6 | −0.7 (4) | C21—C22—C23—C24 | −0.2 (4) |
C4—C5—C6—C7 | 1.6 (4) | C22—C23—C24—C25 | 2.3 (4) |
C5—C6—C7—C8 | −1.0 (4) | C23—C24—C25—C26 | −2.0 (4) |
C4—C3—C8—C7 | 1.2 (4) | C24—C25—C26—C21 | −0.4 (4) |
C2—C3—C8—C7 | −179.5 (2) | C24—C25—C26—C27 | −178.7 (3) |
C4—C3—C8—C9 | −178.3 (2) | C22—C21—C26—C25 | 2.5 (4) |
C2—C3—C8—C9 | 1.0 (3) | C20—C21—C26—C25 | −173.5 (2) |
C6—C7—C8—C3 | −0.3 (4) | C22—C21—C26—C27 | −178.9 (2) |
C6—C7—C8—C9 | 179.0 (3) | C20—C21—C26—C27 | 5.1 (3) |
C3—C8—C9—C10 | 175.1 (3) | C25—C26—C27—C28 | −4.1 (5) |
C7—C8—C9—C10 | −4.3 (5) | C21—C26—C27—C28 | 177.5 (3) |
C3—C8—C9—C14 | −3.4 (3) | C25—C26—C27—C32 | 174.3 (3) |
C7—C8—C9—C14 | 177.3 (3) | C21—C26—C27—C32 | −4.2 (3) |
C14—C9—C10—C11 | 0.0 (4) | C32—C27—C28—C29 | 0.1 (4) |
C8—C9—C10—C11 | −178.2 (3) | C26—C27—C28—C29 | 178.3 (3) |
C9—C10—C11—C12 | −1.7 (4) | C27—C28—C29—C30 | −1.5 (5) |
C10—C11—C12—C13 | 2.4 (5) | C28—C29—C30—C31 | 1.9 (5) |
C11—C12—C13—C14 | −1.2 (4) | C29—C30—C31—C32 | −0.8 (4) |
C12—C13—C14—C9 | −0.4 (4) | C30—C31—C32—C27 | −0.6 (4) |
C12—C13—C14—C2 | 174.0 (2) | C30—C31—C32—C20 | −179.6 (3) |
C10—C9—C14—C13 | 1.1 (4) | C28—C27—C32—C31 | 0.9 (4) |
C8—C9—C14—C13 | 179.7 (2) | C26—C27—C32—C31 | −177.6 (2) |
C10—C9—C14—C2 | −174.3 (2) | C28—C27—C32—C20 | −179.9 (2) |
C8—C9—C14—C2 | 4.4 (3) | C26—C27—C32—C20 | 1.5 (3) |
C1—C2—C14—C13 | 66.8 (3) | C19—C20—C32—C31 | −59.4 (4) |
C3—C2—C14—C13 | −178.5 (3) | C21—C20—C32—C31 | −179.6 (3) |
C15—C2—C14—C13 | −57.8 (4) | C33—C20—C32—C31 | 60.5 (4) |
C1—C2—C14—C9 | −118.3 (3) | C19—C20—C32—C27 | 121.5 (2) |
C3—C2—C14—C9 | −3.6 (3) | C21—C20—C32—C27 | 1.4 (3) |
C15—C2—C14—C9 | 117.1 (2) | C33—C20—C32—C27 | −118.6 (2) |
C1—C2—C15—C16 | −179.7 (2) | C19—C20—C33—C34 | 175.5 (2) |
C3—C2—C15—C16 | 60.2 (3) | C32—C20—C33—C34 | 55.6 (3) |
C14—C2—C15—C16 | −53.5 (3) | C21—C20—C33—C34 | −58.1 (3) |
C2—C15—C16—C17 | −177.7 (2) | C20—C33—C34—C35 | 178.4 (2) |
C15—C16—C17—C18 | 179.1 (2) | C33—C34—C35—C36 | −176.3 (2) |
C16—C17—C18—Br1 | −170.04 (19) | C34—C35—C36—Br2 | −174.89 (18) |
D—H···A | D—H | H···A | D···A | D—H···A |
O2—H2···O1i | 0.84 | 1.81 | 2.652 (2) | 175 |
O3—H3···O4ii | 0.84 | 1.80 | 2.642 (2) | 176 |
C18—H18B···O4iii | 0.99 | 2.54 | 3.377 (4) | 142 |
C36—H36B···O1iv | 0.99 | 2.44 | 3.386 (4) | 159 |
Symmetry codes: (i) −x, −y+2, −z+1; (ii) −x+2, −y+1, −z; (iii) −x+1, −y+1, −z; (iv) −x+1, −y+1, −z+1. |
D—H···A | D—H | H···A | D···A | D—H···A |
O2—H2···O1i | 0.84 | 1.81 | 2.652 (2) | 175 |
O3—H3···O4ii | 0.84 | 1.80 | 2.642 (2) | 176 |
C18—H18B···O4iii | 0.99 | 2.54 | 3.377 (4) | 142 |
C36—H36B···O1iv | 0.99 | 2.44 | 3.386 (4) | 159 |
Symmetry codes: (i) −x, −y+2, −z+1; (ii) −x+2, −y+1, −z; (iii) −x+1, −y+1, −z; (iv) −x+1, −y+1, −z+1. |
Acknowledgements
The authors thank Mr Hai-Bin Song of Nankai University for helpful suggestions.
References
Burnett, J. R. & Watts, G. F. (2007). Exp. Opin. Ther. Targets, 11, 181–189. Web of Science CrossRef CAS Google Scholar
Cuchel, M., Meagher, E. A., du Toit Theron, H., Blom, D. J., Marais, A. D., Hegele, R. A., Averna, M. R., Sirtori, C. R., Shah, P. K., Gaudet, D., Stefanutti, C., Vigna, G. B., Du Plessis, A. M., Propert, K. J., Sasiela, W. J., Bloedon, L. T. & Rader, D. J. (2013). Lancet, 381, 40–46. Web of Science CrossRef CAS PubMed Google Scholar
Rigaku/MSC (2005). CrystalClear. Rigaku/MSC Inc., The Woodlands, Texas, USA. Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Stein, E. A. (2009). J. Endocrin. Metabol. Clin. North Am. 38, 99–119. Web of Science CrossRef CAS Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Lomitapide mesylate is a microsomal triglyceride transfer protein inhibitor which can lower the level of low density lipoprotein cholesterol in plasma. It has a new mechanism on lowering the lipid and mainly used by patients with homozygous familial hypercholesterolemia (Stein et al. (2009); Cuchel et al. (2013); Burnett & Watts (2007). The crystal structure of the title compound, a key intermediate in the synthesis of lomitapide mesylate is reported here.
As shown in Fig. 1, it crystallizes with two similar molecules (A and B) in the asymmetric unit. In molecule A, the C2–C14 triple-ring plane and the carbon chain plane defined by C1/C2/C15/C16/C17/C18 formed a dihedral angle of 86.88 (11)°. Molecule B exhibited a similar conformation to molecule A, with the dihedral angle of 86.85 (11)°. In the crystal, the packing is realised by intermolecular C—H···O and O—H···O interactions.