research communications
R,5R,8bR)-5-hydroperoxy-2-phenyl-6-tosyl-4,5,6,8b-tetrahydropyrrolo[3,4-e]indole-1,3(2H,3aH)-dione
of (±)-(3aaDepartment of Chemistry, University of Minnesota, Minneapolis, MN 55455-0431, USA
*Correspondence e-mail: nolan001@umn.edu
The title compound, C23H20N2O6S, crystallizes as a racemate in the P-1, with an overall L- or J-shape to each molecule. Centrosymmetric pairs of molecules are tandem hydrogen bonded between the hydroperoxy H atom and carbonyl O atom. A different centrosymmetric pairing has stacked S-tolyl rings, and a third pairing is L,J-interlocked by the short leg. Except for stacked tolyl pairs, neighboring π-systems are much closer to orthogonal than coaxial. The title compound is the first example of a hydroperoxide obtained from the autoxidation of a Diels–Alder adduct of a 2-vinylpyrrole.
Keywords: crystal structure; hydroperoxide; autoxidation; cycloaddition; pyrrole; indole.
CCDC reference: 1022638
1. Chemical context
Diels–Alder reactions of vinylpyrroles with maleimides have been studied as a method to form substituted indole compounds (Noland et al., 2009; Xiao & Ketcha, 1995). Related reactions have been done with other heterocycles (Abarca et al., 1985; Jones et al., 1984; Noland et al., 1983). Diels–Alder reactions between vinylheterocycles and dienophiles are useful for forming fused ring systems that may have biological activity or versatility in natural product synthesis (Booth et al., 2005; Kanai et al. 2005; Nagai et al. 1993; Noland & Pardi, 2005).
The hydroperoxide title compound (I) (Fig. 1) was isolated after performing a Diels–Alder reaction between N-tosyl-2-vinylpyrrole (Settambolo et al., 1997) and N-phenylmaleimide (commercially available). An analogous compound was proposed, though not isolated, as an intermediate for an alcohol product obtained from a similar reaction (Eitel & Pindur, 1988). No analogous hydroperoxides have been claimed from reactions of 2-vinyl -pyrroles, -indoles, -thiophenes, or -benzothiophenes. There are a few examples of hydroperoxides isolated from Diels–Alder reactions between 2-vinylfuran or 2-vinylbenzofuran and dienophiles, but the products were not crystallographically categorized (Brewer & Elix, 1975; Kotsuki et al., 1981; Skoric et al., 2001).
2. Structural commentary
The N-phenyl, S-phenyl, and pyrrolo rings are individually planar within 0.009, 0.011, and 0.010 Å, respectively. The N-phenyl ring (C7–C11) is twisted 58.3 (2)° out of plane from the imido moiety (C5, N2, C12, Figs. 2 and 4). The cyclohexene ring has a half-chair conformation with C14 out of plane in the direction anti- to the S-tolyl group (Figs. 2 and 4), which is bent 85.4 (2)° out of plane with the pyrrolo ring, giving the molecule an overall L- or J- shape.
3. Supramolecular features
Interlocking pairs are aligned such that the axis of the S-tolyl group (C21) points toward the face of the cyclohexene ring (C3, C14, C15, Fig. 3). Hydrogen-bonded dimers form between H4O and O2 (Table 1, Figs. 4 and 6). Hydrogen bonding acts approximately along [4] and twists the hydroperoxy group to have a torsion angle of 95.0°. In different pairings than those that interlock, S-tolyl groups stack rotated 180° about an oblique axis, [0.803, −0.544, 0.244] (Figs. 2 and 5). Each pair of S-tolyl pairs is sheared by approximately 3.7 Å from its neighbor. Similarly oriented N-phenyl rings are separated from each other by S-tolyl groups (C21, Fig. 6), with an angle of 69.26° between the S-tolyl and N-phenyl planes. Pyrrolo groups (N1, C1, C2) each have their endo face toward an edge of an N-phenyl group (C10, C11, Fig. 7), with an angle of 69.4 (2)° between the pyrrolo and N-phenyl planes.
4. Database survey
The structures shown in Fig. 8 represent the cores of most compounds that could be obtained by Diels–Alder reactions of the type that gave title compound (I), using nitrogen heterocyclic dienes and dienophiles. Searching these substructures found six entries in the current database (Cambridge Structural Database, Version 5.35, November 2013; Allen 2002). Only two of these were synthesized by cycloadditions of this type [a combretastatin derivative (Ty et al., 2010); carbazomycin B (Beccali et al., 1996)]. Upon expanding the search to include any combination of heteroatoms at nitrogen and oxygen sites, seven additional entries were found, all within or closely related to the caesalmin family of furanoditerpenoid antivirals (i.e., Rodrigues et al., 2004; Jiang et al., 2002). Of 13 total entries, none was found containing sulfur atoms. Ten exhibit intermolecular hydrogen bonding, but only two of them are tandem-bonded dimers [pyrimidinone carbonyl to carboxylic acid (Obushak et al., 2011); succinimide dimerization between N-H and a carbonyl oxygen (Beccali et al., 1996)]. None of these structures resembles that of compound (I).
5. Synthesis and crystallization
N-Tosyl-2-vinylpyrrole (458 mg) and N-phenylmaleimide (272 mg) were dissolved in chloroform (1.5 ml) and stirred for 72 h at room temperature in a vessel open to air. on silica gel (1:1 hexane:ethyl acetate, Rf = 0.30), followed by recrystallization from dichloromethane–petroleum ether (b.p. 311–333 K) gave compound (I) as colourless plates (17 mg, 2.4%, m.p. 425–426 K). 1H NMR (500 MHz, (CD3)2SO) δ 11.96 (s, 1H, H4O), 7.974 (d, J = 3.4 Hz, 2H, H18, H23), 7.483 (t, J = 8.0 Hz, 2H, H8, H10), 7.427 (m, 3H, H9, H19, H22), 7.283 (dd, J = 8.8, 1.0 Hz, 2H, H7, H11), 6.516 (d, J = 3.4 Hz, 1H, H2), 5.485 (dd, J = 2.9, 2.7 Hz, 1H, H15), 4.241 (d, J = 8.3 Hz, 1H, H4), 3.375 (ddd, J = 13.7, 8.3, 5.8 Hz, 1H, H13), 2.824 (ddd, J = 14.1, 5.8, 2.9 Hz, 1H, H14A), 2.384 (s, 3H, H21), 1.886 (ddd, J = 14.1, 13.7, 2.7 Hz, 1H, H14B); 13C NMR (126 MHz, (CD3)2SO) δ 178.09 (C12), 174.85 (C5), 145.49 (C20), 135.06 (C17), 132.36 (C6), 129.94 (C19, C22), 128.87 (C8, C10), 128.43 (C9), 127.57 (C18, C23), 127.26 (C7, C11), 125.32 (C16), 124.14 (C1), 121.63 (C3), 112.27 (C2), 70.77 (C15), 38.79 (C4), 35.32 (C13), 27.85 (C14), 21.10 (C21); IR (NaCl, cm−1) 3361 (O–H), 2917 (C–H), 1713 (C=O), 1595 (C=C), 1370 (S=O), 1177 (C–O), 808, 751, 672; MS (ESI, PEG, m/z) [M+Na]+ calculated for C23H20N2O6S 475.0934, found 475.0921.
Safety Note: Hydroperoxides, particularly those bearing an α-proton (e.g., H15, Fig. 1), can be shock- or heat-sensitive and detonate violently (Francisco, 1993). Although sensitivity tests on our batch of title compound (I) were negative, appropriate precautions should be taken when reproducing or extending our work with (I) or similar compounds. Metal tools, glass or metal storage vessels, high oxygen- or nitrogen-to-carbon ratios, and large scales should all be avoided. The bulk of product should be kept in solution, with small aliquots being allowed to dry only as necessary.
6. Refinement
A direct-methods solution was calculated which provided most non-hydrogen atoms from the E-map. Full-matrix least-squares/difference Fourier cycles were performed, which located the remaining non-hydrogen atoms. All non-hydrogen atoms were refined with anisotropic displacement parameters. All hydrogen atoms except for H4O were placed in ideal positions and refined as constrained atoms with Uiso(Hn) = 1.2Ueq(Cn), except for the methyl group, where Uiso(H21i) = 1.5Ueq(C21). The bond lengths (Å) specified for C–H hydrogens were 0.93 (aryl), 0.96 (methyl), 0.97 (methylene), and 0.98 (methine). H4O was found from the difference Fourier map and refined with Uiso(H4O) = 1.2Ueq(O4) and an O—H bond length of 0.82 Å. The final full-matrix least-squares converged to R1 = 0.0364 and wR2 = 0.1161 (F2, all data). Crystal data, data collection and structure details are summarized in Table 2.
Supporting information
CCDC reference: 1022638
10.1107/S1600536814019874/hb7256sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536814019874/hb7256Isup2.hkl
Supporting information file. DOI: 10.1107/S1600536814019874/hb7256Isup3.cml
Diels–Alder reactions of vinylpyrroles with maleimides have been studied as a method to form substituted indole compounds (Noland et al., 2009; Xiao & Ketcha, 1995). Related reactions have been done with other heterocycles (Abarca et al., 1985; Jones et al., 1984; Noland et al., 1983). Diels–Alder reactions between vinylheterocycles and dienophiles are useful for forming fused ring systems that may have biological activity or versatility in natural product synthesis (Booth et al., 2005; Kanai et al. 2005; Nagai et al. 1993; Noland & Pardi, 2005).
The hydroperoxide title compound (I) (Fig. 1) was isolated after performing a Diels–Alder reaction between N-tosyl-2-vinylpyrrole (Settambolo et al., 1997) and N-phenylmaleimide (commercially available). An analogous compound was proposed, though not isolated, as an intermediate for an alcohol product obtained from a similar reaction (Eitel & Pindur, 1988). No analogous hydroperoxides have been claimed from reactions of 2-vinyl -pyrroles, -indoles, -thiophenes, or -benzothiophenes. There are a few examples of hydroperoxides isolated from Diels–Alder reactions between 2-vinylfuran or 2-vinylbenzofuran and dienophiles, but the products were not crystallographically categorized (Brewer & Elix, 1975; Kotsuki et al., 1981; Skoric et al., 2001).
The N-phenyl, S-phenyl, and pyrrolo rings are individually planar within 0.009, 0.011, and 0.010 Å, respectively. The N-phenyl ring (C7–C11) is twisted 58.3 (2)° out of plane from the imido moiety (C5, N2, C12, Figs. 2 and 4). The cyclohexene ring has half-chair geometry with C14 out of plane in the direction anti- to the S-tolyl group (Figs. 2 and 4), which is bent 85.4 (2)° out of plane with the pyrrolo ring, giving the molecule an overall L- or J- shape.
Interlocking pairs are aligned such that the axis of the S-tolyl group (C21) points toward the face of the cyclohexene ring (C3, C14, C15, Fig. 3). Hydrogen-bonded dimers form between H4O and O2 (Table 1, Figs. 4 and 6). Hydrogen bonding acts approximately along [411] and twists the hydroperoxy group to have a torsion angle of 95.0°. In different pairings than those that interlock, S-tolyl groups stack rotated 180° about an oblique axis, [0.803, -0.544, 0.244] (Figs. 2 and 5). Each pair of S-tolyl pairs is sheared by approximately 3.7 Å from its neighbor. Similarly oriented N-phenyl rings are separated from each other by S-tolyl groups (C21, Fig. 6), with an angle of 69.26° between the S-tolyl and N-phenyl planes. Pyrrolo groups (N1, C1, C2) each have their endo face toward an edge of an N-phenyl group (C10, C11, Fig. 7), with an angle of 69.4 (2)° between the pyrrolo and N-phenyl planes.
The structures shown in Figure 8 represent the cores of most compounds that could be obtained by Diels–Alder reactions of the type that gave title compound (I), using nitrogen heterocyclic dienes and dienophiles. Searching these substructures found six entries in the current database (Cambridge Structural Database, Version 5.35, November 2013; Allen 2002). Only two of these were synthesized by cycloadditions of this type [a combretastatin derivative (Ty et al., 2010); carbazomycin B (Beccali et al., 1996)]. Upon expanding the search to include any combination of heteroatoms at nitrogen and oxygen sites, seven additional entries were found, all within or closely related to the caesalmin family of furanoditerpenoid antivirals (i.e., Rodrigues et al., 2004; Jiang et al., 2002). Of 13 total entries, none was found containing sulfur atoms anywhere. Ten exhibit intermolecular hydrogen bonding, but only two of them are tandem-bonded dimers [pyrimidinone carbonyl to carboxylic acid (Obushak et al., 2011); succinimide dimerization between N—H and a carbonyl oxygen (Beccali et al., 1996)]. None of these structures resembles that of compound (I).
N-Tosyl-2-vinylpyrrole (458 mg) and N-phenylmaleimide (272 mg) were dissolved in chloroform (1.5 ml) and stirred for 72 hours at room temperature in a vessel open to air. δ 11.96 (s, 1H, H4O), 7.974 (d, J = 3.4 Hz, 2H, H18, H23), 7.483 (t, J = 8.0 Hz, 2H, H8, H10), 7.427 (m, 3H, H9, H19, H22), 7.283 (dd, J = 8.8, 1.0 Hz, 2H, H7, H11), 6.516 (d, J = 3.4 Hz, 1H, H2), 5.485 (dd, J = 2.9, 2.7 Hz, 1H, H15), 4.241 (d, J = 8.3 Hz, 1H, H4), 3.375 (ddd, J = 13.7, 8.3, 5.8 Hz, 1H, H13), 2.824 (ddd, J = 14.1, 5.8, 2.9 Hz, 1H, H14A), 2.384 (s, 3H, H21), 1.886 (ddd, J = 14.1, 13.7, 2.7 Hz, 1H, H14B); 13C NMR (126 MHz, (CD3)2SO) δ 178.09 (C12), 174.85 (C5), 145.49 (C20), 135.06 (C17), 132.36 (C6), 129.94 (C19, C22), 128.87 (C8, C10), 128.43 (C9), 127.57 (C18, C23), 127.26 (C7, C11), 125.32 (C16), 124.14 (C1), 121.63 (C3), 112.27 (C2), 70.77 (C15), 38.79 (C4), 35.32 (C13), 27.85 (C14), 21.10 (C21); IR (NaCl, cm-1) 3361 (O–H), 2917 (C–H), 1713 (C=O), 1595 (C=C), 1370 (S=O), 1177 (C–O), 808, 751, 672; MS (ESI, PEG, m/z) [M+Na]+ calculated for C23H20N2O6S 475.0934, found 475.0921.
on silica gel (1:1 hexane:ethyl acetate, Rf = 0.30), followed by recrystallization from dichloromethane–petroleum ether (b.p. 311–333 K) gave compound (I) as colourless plates (17 mg, 2.4%, m.p. 425–426 K). 1H NMR (500 MHz, (CD3)2SO)Safety Note: Hydroperoxides, particularly those bearing an α-proton (e.g., H15, Fig. 1), can be shock- or heat-sensitive and detonate violently (Francisco, 1993). Although sensitivity tests on our batch of title compound (I) were negative, appropriate precautions should be taken when reproducing or extending our work with (I) or similar compounds. Metal tools, glass or metal storage vessels, high oxygen- or nitrogen-to-carbon ratios, and large scales should all be avoided. The bulk of product should be kept in solution, with small aliquots being allowed to dry only as necessary.
A direct-methods solution was calculated which provided most non-hydrogen atoms from the E-map. Full-matrix least squares / difference Fourier cycles were performed which located the remaining non-hydrogen atoms. All non-hydrogen atoms were refined with anisotropic displacement parameters. All hydrogen atoms except for H4O were placed in ideal positions and refined as constrained atoms with Uiso(Hn) = 1.2Ueq(Cn), except for the methyl group, where Uiso(H21i) = 1.5Ueq(C21) . The bond lengths (Å) specified for C–H hydrogens were 0.93 (aryl), 0.96 (methyl), 0.97 (methylene), and 0.98 (methine). H4O was found from the difference map and refined with Uiso(H4O) = 1.2Ueq(O4) and an O—H bond length of 0.82 Å. The final full-matrix least-squares
converged to R1 = 0.0364 and wR2 = 0.1161 (F2, all data). Crystal data, data collection and structure details are summarized in Table 2.Data collection: SMART (Bruker, 2001); cell
SAINT (Bruker, 2003); data reduction: SAINT (Bruker, 2003); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: Mercury (Macrae et al., 2008); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008), enCIFer (Allen et al., 2004), and publCIF (Westrip, 2010).Fig. 1. The molecular structure of (I) with displacement ellipsoids drawn at the 50% probability level. | |
Fig. 2. Two pairs of stacked tolyl groups, viewed along [112]. The central two molecules form an interlocked pair. Twisting of the N-Phenyl group, and out-of-plane position of C14, are also depicted. | |
Fig. 3. The central interlocked pair from Figure 2, viewed along [221]. The C20,C21-axis is aligned with the face of the cyclohexene ring of its interlocked partner. | |
Fig. 4. Hydrogen-bonded dimers, viewed along [100]. Hydrogen bonds (O2, O4) are shown in turquoise. Also apparent are the twisting of N-phenyl rings (C5, N2, C8, C9), and the half-chair conformation of the cyclohexene ring (C4, C14, lower molecule). | |
Fig. 5. The two tolyl-stacked pairs from Figure 2, viewed along [210]. Neighboring pairs are sheared roughly 1.5 phenyl ring diameters. | |
Fig. 6. Edge-to-face stacks of S-tolyl and N-phenyl rings, and hydrogen-bonded (turquoise) dimerization, viewed slightly off [001]. | |
Fig. 7. The endo face of pyrrole rings (N1, C1, C2) neighboring the edge of an N-phenyl ring (C10, C11) of an adjacent molecule of the same enantiomer, viewed along [414]. | |
Fig. 8. Substructures used for the database survey. |
C23H20N2O6S | F(000) = 472 |
Mr = 452.48 | Dx = 1.419 Mg m−3 |
Triclinic, P1 | Melting point: 425 K |
a = 8.6563 (13) Å | Mo Kα radiation, λ = 0.71073 Å |
b = 9.8819 (15) Å | Cell parameters from 2698 reflections |
c = 13.533 (2) Å | θ = 2.5–25.1° |
α = 102.068 (3)° | µ = 0.20 mm−1 |
β = 107.786 (2)° | T = 293 K |
γ = 96.364 (2)° | Block, colourless |
V = 1058.8 (3) Å3 | 0.60 × 0.50 × 0.20 mm |
Z = 2 |
Bruker SMART Platform CCD diffractometer | 3751 independent reflections |
Radiation source: normal-focus sealed tube | 3194 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.021 |
area detector, ω scans per phi | θmax = 25.1°, θmin = 1.6° |
Absorption correction: multi-scan (SADABS; Blessing, 1995) | h = −10→10 |
Tmin = 0.891, Tmax = 0.962 | k = −11→11 |
10544 measured reflections | l = −16→16 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.036 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.116 | H-atom parameters constrained |
S = 1.06 | w = 1/[σ2(Fo2) + (0.0678P)2 + 0.2551P] where P = (Fo2 + 2Fc2)/3 |
3751 reflections | (Δ/σ)max < 0.001 |
290 parameters | Δρmax = 0.27 e Å−3 |
0 restraints | Δρmin = −0.28 e Å−3 |
C23H20N2O6S | γ = 96.364 (2)° |
Mr = 452.48 | V = 1058.8 (3) Å3 |
Triclinic, P1 | Z = 2 |
a = 8.6563 (13) Å | Mo Kα radiation |
b = 9.8819 (15) Å | µ = 0.20 mm−1 |
c = 13.533 (2) Å | T = 293 K |
α = 102.068 (3)° | 0.60 × 0.50 × 0.20 mm |
β = 107.786 (2)° |
Bruker SMART Platform CCD diffractometer | 3751 independent reflections |
Absorption correction: multi-scan (SADABS; Blessing, 1995) | 3194 reflections with I > 2σ(I) |
Tmin = 0.891, Tmax = 0.962 | Rint = 0.021 |
10544 measured reflections |
R[F2 > 2σ(F2)] = 0.036 | 0 restraints |
wR(F2) = 0.116 | H-atom parameters constrained |
S = 1.06 | Δρmax = 0.27 e Å−3 |
3751 reflections | Δρmin = −0.28 e Å−3 |
290 parameters |
Experimental. The space group P-1 was determined based on systematic absences and intensity statistics. |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
S1 | 0.46933 (5) | 0.12220 (5) | 0.31067 (4) | 0.04468 (16) | |
O1 | 1.0118 (2) | −0.3093 (2) | 0.31048 (15) | 0.0865 (6) | |
O2 | 1.09502 (19) | −0.14706 (14) | 0.03647 (12) | 0.0582 (4) | |
O3 | 0.74791 (17) | 0.17137 (13) | 0.16243 (10) | 0.0499 (3) | |
O4 | 0.6719 (2) | 0.20863 (16) | 0.06212 (12) | 0.0649 (4) | |
H4O | 0.7339 | 0.2033 | 0.0268 | 0.078* | |
O5 | 0.40641 (16) | 0.13010 (15) | 0.20262 (10) | 0.0566 (4) | |
O6 | 0.36195 (16) | 0.06483 (15) | 0.35954 (12) | 0.0601 (4) | |
N1 | 0.60788 (18) | 0.01608 (15) | 0.31539 (12) | 0.0418 (3) | |
N2 | 1.08339 (19) | −0.24962 (16) | 0.17207 (12) | 0.0474 (4) | |
C1 | 0.6732 (2) | −0.0313 (2) | 0.40679 (15) | 0.0480 (4) | |
H1 | 0.6284 | −0.0301 | 0.4612 | 0.058* | |
C2 | 0.8110 (2) | −0.0788 (2) | 0.40345 (15) | 0.0502 (5) | |
H2 | 0.8770 | −0.1182 | 0.4539 | 0.060* | |
C3 | 0.8381 (2) | −0.05797 (19) | 0.30826 (13) | 0.0420 (4) | |
C4 | 0.9808 (2) | −0.0811 (2) | 0.27117 (14) | 0.0457 (4) | |
H4 | 1.0786 | −0.0165 | 0.3247 | 0.055* | |
C5 | 1.0216 (2) | −0.2278 (2) | 0.25780 (16) | 0.0539 (5) | |
C6 | 1.1781 (2) | −0.35732 (19) | 0.15237 (15) | 0.0486 (4) | |
C7 | 1.1125 (3) | −0.4973 (2) | 0.13290 (17) | 0.0610 (5) | |
H7 | 1.0042 | −0.5252 | 0.1291 | 0.073* | |
C8 | 1.2118 (4) | −0.5966 (2) | 0.11898 (18) | 0.0739 (7) | |
H8 | 1.1700 | −0.6916 | 0.1076 | 0.089* | |
C9 | 1.3694 (4) | −0.5565 (3) | 0.1218 (2) | 0.0801 (8) | |
H9 | 1.4336 | −0.6239 | 0.1112 | 0.096* | |
C10 | 1.4322 (4) | −0.4178 (3) | 0.1400 (2) | 0.0857 (8) | |
H10 | 1.5393 | −0.3904 | 0.1413 | 0.103* | |
C11 | 1.3370 (3) | −0.3167 (2) | 0.1568 (2) | 0.0669 (6) | |
H11 | 1.3811 | −0.2217 | 0.1710 | 0.080* | |
C12 | 1.0551 (2) | −0.14946 (18) | 0.11427 (15) | 0.0443 (4) | |
C13 | 0.9635 (2) | −0.04746 (18) | 0.16302 (14) | 0.0429 (4) | |
H13 | 1.0188 | 0.0496 | 0.1752 | 0.051* | |
C14 | 0.7826 (2) | −0.06872 (18) | 0.09075 (14) | 0.0427 (4) | |
H14A | 0.7783 | −0.0455 | 0.0239 | 0.051* | |
H14B | 0.7310 | −0.1668 | 0.0739 | 0.051* | |
C15 | 0.6877 (2) | 0.02411 (18) | 0.14624 (13) | 0.0415 (4) | |
H15 | 0.5697 | 0.0001 | 0.1039 | 0.050* | |
C16 | 0.7143 (2) | 0.00040 (17) | 0.25498 (13) | 0.0378 (4) | |
C17 | 0.5829 (2) | 0.28523 (19) | 0.39512 (14) | 0.0435 (4) | |
C18 | 0.6708 (3) | 0.3751 (2) | 0.35718 (17) | 0.0550 (5) | |
H18 | 0.6656 | 0.3521 | 0.2858 | 0.066* | |
C19 | 0.7667 (3) | 0.5001 (2) | 0.42738 (19) | 0.0618 (6) | |
H19 | 0.8253 | 0.5616 | 0.4024 | 0.074* | |
C20 | 0.7770 (3) | 0.5351 (2) | 0.53416 (18) | 0.0592 (5) | |
C21 | 0.8857 (3) | 0.6697 (3) | 0.6109 (2) | 0.0849 (8) | |
H21A | 0.9501 | 0.6498 | 0.6760 | 0.127* | |
H21B | 0.8180 | 0.7359 | 0.6270 | 0.127* | |
H21C | 0.9582 | 0.7091 | 0.5785 | 0.127* | |
C22 | 0.6853 (3) | 0.4442 (2) | 0.56897 (17) | 0.0623 (6) | |
H22 | 0.6886 | 0.4682 | 0.6399 | 0.075* | |
C23 | 0.5893 (3) | 0.3192 (2) | 0.50137 (16) | 0.0561 (5) | |
H23 | 0.5297 | 0.2585 | 0.5264 | 0.067* |
U11 | U22 | U33 | U12 | U13 | U23 | |
S1 | 0.0331 (2) | 0.0524 (3) | 0.0469 (3) | 0.00619 (19) | 0.01535 (19) | 0.0075 (2) |
O1 | 0.1099 (14) | 0.1116 (14) | 0.0929 (12) | 0.0657 (12) | 0.0665 (11) | 0.0702 (12) |
O2 | 0.0736 (9) | 0.0576 (8) | 0.0673 (9) | 0.0237 (7) | 0.0473 (8) | 0.0254 (7) |
O3 | 0.0635 (8) | 0.0467 (7) | 0.0459 (7) | 0.0136 (6) | 0.0247 (6) | 0.0140 (6) |
O4 | 0.0787 (10) | 0.0795 (10) | 0.0667 (9) | 0.0402 (8) | 0.0424 (8) | 0.0423 (8) |
O5 | 0.0447 (7) | 0.0696 (9) | 0.0483 (8) | 0.0146 (6) | 0.0084 (6) | 0.0091 (6) |
O6 | 0.0425 (7) | 0.0688 (9) | 0.0723 (9) | 0.0034 (6) | 0.0314 (7) | 0.0108 (7) |
N1 | 0.0391 (8) | 0.0465 (8) | 0.0433 (8) | 0.0059 (6) | 0.0196 (6) | 0.0115 (6) |
N2 | 0.0507 (9) | 0.0484 (9) | 0.0504 (9) | 0.0150 (7) | 0.0236 (7) | 0.0157 (7) |
C1 | 0.0546 (11) | 0.0550 (11) | 0.0443 (10) | 0.0098 (9) | 0.0266 (9) | 0.0189 (8) |
C2 | 0.0535 (11) | 0.0612 (12) | 0.0418 (10) | 0.0152 (9) | 0.0183 (9) | 0.0200 (9) |
C3 | 0.0367 (9) | 0.0502 (10) | 0.0377 (9) | 0.0062 (7) | 0.0133 (7) | 0.0079 (7) |
C4 | 0.0361 (9) | 0.0583 (11) | 0.0408 (9) | 0.0088 (8) | 0.0130 (7) | 0.0088 (8) |
C5 | 0.0495 (11) | 0.0702 (13) | 0.0537 (11) | 0.0214 (10) | 0.0238 (9) | 0.0255 (10) |
C6 | 0.0549 (11) | 0.0473 (10) | 0.0450 (10) | 0.0172 (8) | 0.0162 (8) | 0.0120 (8) |
C7 | 0.0657 (13) | 0.0542 (12) | 0.0545 (12) | 0.0097 (10) | 0.0096 (10) | 0.0126 (9) |
C8 | 0.106 (2) | 0.0464 (12) | 0.0550 (13) | 0.0230 (13) | 0.0084 (13) | 0.0055 (10) |
C9 | 0.093 (2) | 0.0737 (17) | 0.0715 (16) | 0.0450 (15) | 0.0204 (14) | 0.0114 (13) |
C10 | 0.0717 (16) | 0.0843 (19) | 0.108 (2) | 0.0351 (14) | 0.0369 (15) | 0.0195 (16) |
C11 | 0.0604 (13) | 0.0548 (12) | 0.0870 (16) | 0.0165 (10) | 0.0291 (12) | 0.0117 (11) |
C12 | 0.0451 (10) | 0.0424 (9) | 0.0510 (10) | 0.0071 (8) | 0.0240 (8) | 0.0127 (8) |
C13 | 0.0429 (9) | 0.0414 (9) | 0.0484 (10) | 0.0062 (7) | 0.0227 (8) | 0.0101 (8) |
C14 | 0.0502 (10) | 0.0423 (9) | 0.0373 (9) | 0.0078 (8) | 0.0185 (8) | 0.0086 (7) |
C15 | 0.0393 (9) | 0.0458 (9) | 0.0382 (9) | 0.0061 (7) | 0.0136 (7) | 0.0087 (7) |
C16 | 0.0339 (8) | 0.0419 (9) | 0.0367 (8) | 0.0019 (7) | 0.0148 (7) | 0.0065 (7) |
C17 | 0.0371 (9) | 0.0475 (10) | 0.0458 (10) | 0.0115 (8) | 0.0136 (8) | 0.0105 (8) |
C18 | 0.0590 (12) | 0.0555 (11) | 0.0552 (11) | 0.0105 (9) | 0.0291 (10) | 0.0096 (9) |
C19 | 0.0603 (13) | 0.0477 (11) | 0.0815 (15) | 0.0054 (9) | 0.0356 (11) | 0.0105 (10) |
C20 | 0.0478 (11) | 0.0485 (11) | 0.0684 (14) | 0.0165 (9) | 0.0076 (10) | 0.0023 (10) |
C21 | 0.0708 (16) | 0.0581 (14) | 0.100 (2) | 0.0107 (12) | 0.0115 (14) | −0.0084 (13) |
C22 | 0.0750 (15) | 0.0585 (12) | 0.0453 (11) | 0.0179 (11) | 0.0106 (10) | 0.0079 (9) |
C23 | 0.0663 (13) | 0.0558 (12) | 0.0466 (11) | 0.0108 (10) | 0.0192 (10) | 0.0142 (9) |
S1—O5 | 1.4182 (14) | C8—H8 | 0.9300 |
S1—O6 | 1.4278 (14) | C9—C10 | 1.359 (4) |
S1—N1 | 1.6740 (15) | C9—H9 | 0.9300 |
S1—C17 | 1.7494 (19) | C10—C11 | 1.389 (3) |
O1—C5 | 1.194 (2) | C10—H10 | 0.9300 |
O2—C12 | 1.208 (2) | C11—H11 | 0.9300 |
O3—C15 | 1.437 (2) | C12—C13 | 1.516 (2) |
O3—O4 | 1.4590 (18) | C13—C14 | 1.536 (3) |
O4—H4O | 0.8200 | C13—H13 | 0.9800 |
N1—C1 | 1.393 (2) | C14—C15 | 1.528 (2) |
N1—C16 | 1.407 (2) | C14—H14A | 0.9700 |
N2—C12 | 1.383 (2) | C14—H14B | 0.9700 |
N2—C5 | 1.407 (2) | C15—C16 | 1.491 (2) |
N2—C6 | 1.443 (2) | C15—H15 | 0.9800 |
C1—C2 | 1.340 (3) | C17—C18 | 1.382 (3) |
C1—H1 | 0.9300 | C17—C23 | 1.389 (3) |
C2—C3 | 1.429 (2) | C18—C19 | 1.384 (3) |
C2—H2 | 0.9300 | C18—H18 | 0.9300 |
C3—C16 | 1.356 (2) | C19—C20 | 1.386 (3) |
C3—C4 | 1.492 (2) | C19—H19 | 0.9300 |
C4—C5 | 1.517 (3) | C20—C22 | 1.381 (3) |
C4—C13 | 1.535 (2) | C20—C21 | 1.510 (3) |
C4—H4 | 0.9800 | C21—H21A | 0.9600 |
C6—C11 | 1.369 (3) | C21—H21B | 0.9600 |
C6—C7 | 1.373 (3) | C21—H21C | 0.9600 |
C7—C8 | 1.396 (3) | C22—C23 | 1.374 (3) |
C7—H7 | 0.9300 | C22—H22 | 0.9300 |
C8—C9 | 1.364 (4) | C23—H23 | 0.9300 |
O5—S1—O6 | 120.26 (9) | C10—C11—H11 | 120.1 |
O5—S1—N1 | 106.58 (8) | O2—C12—N2 | 124.70 (16) |
O6—S1—N1 | 104.10 (8) | O2—C12—C13 | 126.41 (16) |
O5—S1—C17 | 110.99 (9) | N2—C12—C13 | 108.87 (15) |
O6—S1—C17 | 108.79 (9) | C12—C13—C4 | 103.09 (14) |
N1—S1—C17 | 104.77 (8) | C12—C13—C14 | 111.55 (14) |
C15—O3—O4 | 107.67 (12) | C4—C13—C14 | 112.69 (14) |
O3—O4—H4O | 109.5 | C12—C13—H13 | 109.8 |
C1—N1—C16 | 108.04 (14) | C4—C13—H13 | 109.8 |
C1—N1—S1 | 120.64 (12) | C14—C13—H13 | 109.8 |
C16—N1—S1 | 127.91 (12) | C15—C14—C13 | 110.81 (14) |
C12—N2—C5 | 112.50 (15) | C15—C14—H14A | 109.5 |
C12—N2—C6 | 123.69 (15) | C13—C14—H14A | 109.5 |
C5—N2—C6 | 123.61 (15) | C15—C14—H14B | 109.5 |
C2—C1—N1 | 108.87 (15) | C13—C14—H14B | 109.5 |
C2—C1—H1 | 125.6 | H14A—C14—H14B | 108.1 |
N1—C1—H1 | 125.6 | O3—C15—C16 | 106.51 (13) |
C1—C2—C3 | 107.45 (17) | O3—C15—C14 | 111.80 (14) |
C1—C2—H2 | 126.3 | C16—C15—C14 | 108.60 (14) |
C3—C2—H2 | 126.3 | O3—C15—H15 | 110.0 |
C16—C3—C2 | 108.74 (16) | C16—C15—H15 | 110.0 |
C16—C3—C4 | 121.81 (16) | C14—C15—H15 | 110.0 |
C2—C3—C4 | 129.26 (17) | C3—C16—N1 | 106.87 (15) |
C3—C4—C5 | 117.02 (16) | C3—C16—C15 | 125.22 (15) |
C3—C4—C13 | 113.64 (15) | N1—C16—C15 | 127.44 (15) |
C5—C4—C13 | 104.65 (14) | C18—C17—C23 | 120.96 (18) |
C3—C4—H4 | 107.0 | C18—C17—S1 | 119.98 (14) |
C5—C4—H4 | 107.0 | C23—C17—S1 | 118.99 (15) |
C13—C4—H4 | 107.0 | C17—C18—C19 | 118.74 (19) |
O1—C5—N2 | 124.96 (19) | C17—C18—H18 | 120.6 |
O1—C5—C4 | 128.61 (19) | C19—C18—H18 | 120.6 |
N2—C5—C4 | 106.36 (16) | C18—C19—C20 | 121.3 (2) |
C11—C6—C7 | 120.53 (19) | C18—C19—H19 | 119.3 |
C11—C6—N2 | 118.49 (18) | C20—C19—H19 | 119.3 |
C7—C6—N2 | 120.95 (18) | C22—C20—C19 | 118.47 (19) |
C6—C7—C8 | 118.6 (2) | C22—C20—C21 | 120.6 (2) |
C6—C7—H7 | 120.7 | C19—C20—C21 | 121.0 (2) |
C8—C7—H7 | 120.7 | C20—C21—H21A | 109.5 |
C9—C8—C7 | 120.9 (2) | C20—C21—H21B | 109.5 |
C9—C8—H8 | 119.5 | H21A—C21—H21B | 109.5 |
C7—C8—H8 | 119.5 | C20—C21—H21C | 109.5 |
C10—C9—C8 | 119.9 (2) | H21A—C21—H21C | 109.5 |
C10—C9—H9 | 120.1 | H21B—C21—H21C | 109.5 |
C8—C9—H9 | 120.1 | C23—C22—C20 | 121.6 (2) |
C9—C10—C11 | 120.2 (3) | C23—C22—H22 | 119.2 |
C9—C10—H10 | 119.9 | C20—C22—H22 | 119.2 |
C11—C10—H10 | 119.9 | C22—C23—C17 | 118.9 (2) |
C6—C11—C10 | 119.8 (2) | C22—C23—H23 | 120.5 |
C6—C11—H11 | 120.1 | C17—C23—H23 | 120.5 |
O5—S1—N1—C1 | −169.75 (14) | O2—C12—C13—C14 | 70.7 (2) |
O6—S1—N1—C1 | −41.65 (15) | N2—C12—C13—C14 | −107.92 (17) |
C17—S1—N1—C1 | 72.53 (15) | C3—C4—C13—C12 | −148.89 (15) |
O5—S1—N1—C16 | 33.70 (17) | C5—C4—C13—C12 | −20.06 (18) |
O6—S1—N1—C16 | 161.79 (14) | C3—C4—C13—C14 | −28.5 (2) |
C17—S1—N1—C16 | −84.02 (16) | C5—C4—C13—C14 | 100.34 (17) |
C16—N1—C1—C2 | −1.8 (2) | C12—C13—C14—C15 | 174.11 (14) |
S1—N1—C1—C2 | −162.56 (14) | C4—C13—C14—C15 | 58.70 (19) |
N1—C1—C2—C3 | 1.6 (2) | O4—O3—C15—C16 | −159.65 (12) |
C1—C2—C3—C16 | −0.8 (2) | O4—O3—C15—C14 | 81.87 (16) |
C1—C2—C3—C4 | 174.24 (19) | H4O—O4—O3—C15 | −95.0 |
C16—C3—C4—C5 | −128.24 (19) | C13—C14—C15—O3 | 65.49 (18) |
C2—C3—C4—C5 | 57.3 (3) | C13—C14—C15—C16 | −51.74 (18) |
C16—C3—C4—C13 | −6.0 (2) | C2—C3—C16—N1 | −0.4 (2) |
C2—C3—C4—C13 | 179.55 (18) | C4—C3—C16—N1 | −175.81 (15) |
C12—N2—C5—O1 | 169.9 (2) | C2—C3—C16—C15 | −173.01 (16) |
C6—N2—C5—O1 | −15.1 (3) | C4—C3—C16—C15 | 11.5 (3) |
C12—N2—C5—C4 | −12.9 (2) | C1—N1—C16—C3 | 1.32 (19) |
C6—N2—C5—C4 | 162.11 (16) | S1—N1—C16—C3 | 160.22 (13) |
C3—C4—C5—O1 | −35.7 (3) | C1—N1—C16—C15 | 173.76 (16) |
C13—C4—C5—O1 | −162.4 (2) | S1—N1—C16—C15 | −27.3 (2) |
C3—C4—C5—N2 | 147.29 (16) | O3—C15—C16—C3 | −102.19 (19) |
C13—C4—C5—N2 | 20.51 (19) | C14—C15—C16—C3 | 18.4 (2) |
C12—N2—C6—C11 | 56.6 (3) | O3—C15—C16—N1 | 86.68 (19) |
C5—N2—C6—C11 | −117.8 (2) | C14—C15—C16—N1 | −152.76 (16) |
C12—N2—C6—C7 | −125.4 (2) | O5—S1—C17—C18 | −32.44 (18) |
C5—N2—C6—C7 | 60.2 (3) | O6—S1—C17—C18 | −166.93 (15) |
C11—C6—C7—C8 | 0.7 (3) | N1—S1—C17—C18 | 82.23 (16) |
N2—C6—C7—C8 | −177.25 (18) | O5—S1—C17—C23 | 150.62 (15) |
C6—C7—C8—C9 | −1.7 (3) | O6—S1—C17—C23 | 16.13 (18) |
C7—C8—C9—C10 | 1.1 (4) | N1—S1—C17—C23 | −94.71 (16) |
C8—C9—C10—C11 | 0.5 (4) | C23—C17—C18—C19 | 0.3 (3) |
C7—C6—C11—C10 | 0.9 (4) | S1—C17—C18—C19 | −176.53 (16) |
N2—C6—C11—C10 | 178.9 (2) | C17—C18—C19—C20 | 0.7 (3) |
C9—C10—C11—C6 | −1.5 (4) | C18—C19—C20—C22 | −1.8 (3) |
C5—N2—C12—O2 | −179.12 (19) | C18—C19—C20—C21 | 178.3 (2) |
C6—N2—C12—O2 | 5.9 (3) | C19—C20—C22—C23 | 2.0 (3) |
C5—N2—C12—C13 | −0.4 (2) | C21—C20—C22—C23 | −178.1 (2) |
C6—N2—C12—C13 | −175.46 (16) | C20—C22—C23—C17 | −1.0 (3) |
O2—C12—C13—C4 | −168.10 (19) | C18—C17—C23—C22 | −0.2 (3) |
N2—C12—C13—C4 | 13.25 (18) | S1—C17—C23—C22 | 176.73 (15) |
D—H···A | D—H | H···A | D···A | D—H···A |
O4—H4O···O2i | 0.82 | 2.00 | 2.7929 (19) | 163 |
Symmetry code: (i) −x+2, −y, −z. |
D—H···A | D—H | H···A | D···A | D—H···A |
O4—H4O···O2i | 0.82 | 2.00 | 2.7929 (19) | 163 |
Symmetry code: (i) −x+2, −y, −z. |
Experimental details
Crystal data | |
Chemical formula | C23H20N2O6S |
Mr | 452.48 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 293 |
a, b, c (Å) | 8.6563 (13), 9.8819 (15), 13.533 (2) |
α, β, γ (°) | 102.068 (3), 107.786 (2), 96.364 (2) |
V (Å3) | 1058.8 (3) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.20 |
Crystal size (mm) | 0.60 × 0.50 × 0.20 |
Data collection | |
Diffractometer | Bruker SMART Platform CCD diffractometer |
Absorption correction | Multi-scan (SADABS; Blessing, 1995) |
Tmin, Tmax | 0.891, 0.962 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 10544, 3751, 3194 |
Rint | 0.021 |
(sin θ/λ)max (Å−1) | 0.596 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.036, 0.116, 1.06 |
No. of reflections | 3751 |
No. of parameters | 290 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.27, −0.28 |
Computer programs: SMART (Bruker, 2001), SAINT (Bruker, 2003), SHELXS97 (Sheldrick, 2008), Mercury (Macrae et al., 2008), SHELXL97 (Sheldrick, 2008), enCIFer (Allen et al., 2004), and publCIF (Westrip, 2010).
Acknowledgements
The authors thank Victor G. Young Jr (X-Ray Crystallographic Laboratory, University of Minnesota) and Dr Matthew J. Bruzek for assistance with the
analysis, and the Wayland E. Noland Research Fellowship Fund at the University of Minnesota Foundation for generous financial support of this project.References
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