research communications
of 3-({[(morpholin-4-yl)carbonothioyl]sulfanyl}acetyl)phenyl benzoate
aDepartment of Chemistry, Karnatak University's Karnatak Science College, Dharwad 580 001, Karanataka, India, and bDepartment of Physics, M S Ramaiah Institute of Technology, Bangalore 560 054, Karnataka, India
*Correspondence e-mail: anilgn@msrit.edu
In the title compound, C20H19NO4S2, the morpholine ring adopts the expected chair conformation. The central phenyl ring makes dihedral angles of 67.97 (4) and 7.74 (3)°, respectively, with the benzoate phenyl ring and the morpholine mean plane. In the crystal, molecules are linked by C—H⋯O hydrogen bonds, forming zigzag chains along the b-axis direction. C—H⋯π interactions link centrosymmetrically related molecules, reinforcing the three-dimensional structure.
Keywords: crystal structure; phenyl benzoates; hydrogen bonding.
CCDC reference: 1030398
1. Chemical context
The title compound is a dithiocarbamate ester derivative of 3-(2-bromacetyl) phenyl benzoate, a key starting material used in the synthesis of phenylephrine, (R)-3-[−1-hydroxy-2-(methylamino)ethyl] phenol, which is a selective α1-adrenergic receptor agonist used primarily as a decongestant and as an agent to dilate the pupil and to increase blood pressure. Our current research work is aimed at the synthesis of a series of 3-(2-bromacetyl) phenyl benzoate dithiocarbamate ester derivatives. Dithiocarbamate acid exhibit a range of biological effects, including anti-bacterial, anti-fungal and anti-oxidant activity (Hirschelman et al., 2002) and inhibition of cardiac hypertrophy (Naoto et al. 2008). Recently, it was found that 5-oxohexyl dithiocarbamic acid methyl are potent phase II enzyme inducers, which could be used as cancer chemo-preventive agents (Scozzafava et al., 2000).
2. Structural commentary
In the molecular structure of the title compound, the morpholine ring adopts the expected chair conformation. The phenyl ring makes dihedral angles of 67.97 (4) and 7.74 (3)° respectively with phenyl ring and the morpholine mean plane. This is also reflected in the deviation of the torsion angles C5—S1—C6—C7 = 175.32 (2) and C12—O3—C14—C15 = −178.91 (3)°. Weak intramolecular C—H⋯S hydrogen bonds exist within the morpholyl dithiocarbamate moiety (Table 1).
3. Supramolecular features
In the crystal, molecules are linked by weak C—H⋯O hydrogen bonds, forming zigzag chains along the b axis. C—H⋯π interactions link centrosymmetrically related molecules, reinforcing the three-dimensional structure (Fig. 2)
4. Database survey
A search of the Cambridge Structural Database (Version 5.35, updates February 2014; Groom & Allen, 2014) for 2-(4-methoxyphenyl)-2-oxoethyl dithiocarbamate gave one hit, namely GEGGUV01 (Jian et al., 2006). A search for 2-oxoethyl dithioformate gave two related structures, viz. 2-oxo-2-(2-oxo-2H-chromen-3-yl)ethyl pyrrolidine-1-carbodithioate (Kumar et al., 2013) and (6-methoxy-2-oxo-2H-chromen-4-yl)methyl morpholine-4-carbodithioate (Devarajegowda et al., 2013). Interestingly, dimer formation via C—H⋯O hydrogen bonds is a feature of the packing in these structures.
5. Synthesis and Crystallization
To a solution of NaOH (1 mmol) in 3 ml water was added to a mixture of morpholine (1 mmol) in ethanol (25 ml). After stirring at room temperature for about 20 min, carbon disulfide (1.2 mmol) was added dropwise and the resulting mixture was further stirred at room temperature for 90 min. Then 3-(2-bromacetyl) phenyl benzoate (1 mmol) was added and stirring was continued. After completion of the reaction (monitored by TLC), the solvent was removed under vacuum and the residue was extracted with dichloromethane (2 × 25 ml) and dried over anhydrous MgSO4. The solvent was evaporated and the compound recrystallized from an ethanol–chloroform mixture (3:1) to give the title compound as colourless crystals in 81% yield.
Off-white solid, IR (KBr) νmax/cm−1: 2857, 3073 (C—H aliphatic and aromatic), 1732 (C=O), 1421, 1680 (C=C), 1264 (C—O), 1228 (C=S), 1061 (C—N). 1H NMR (300 MHz, CDCl3): δ 3.77–3.80 (t, 4H), 4.23–4.43 (t, 4H), 4.91(s, 2H), 7.26–7.47 (m, 1H), 7.48–7.51 (m, 2H), 7.53–7.60 (m, 1H), 7.63–768 (m, 1H), 7.90–7.91 (t, 1H), 7.99–8.02 (d, 1H), 8.20–8.22 (d, 2H); 13C NMR (75 MHz, CDCl3): δ 44.6 (C6), 49.5 (C2, C3), 65.6 (C1, C4), 121.83 (C13), 126.0 (C9), 127.1 (C11), 128.6 (C10), 129.8 (C17, C19), 130.2 (C15, C16, C20), 137.6 (C18), 151.2 (C8), 154.93 (C12), 182.82 (C14), 192.15 (C7), 195.75 (C5); MS m/z: 402.10 [M + H]+. Analysis calculated (%) for C20H19NO4S2: C 59.83, H 4.77, N 3.49, S 15.97%; found: C 59.72, H 4.85, N 3.61, S 15.94.
6. Refinement
Crystal data, data collection and structure . The C-bound H atoms were positioned geometrically and allowed to ride on their parent atoms, with C—H = 0.93–0.97Å and Uiso(H) = 1.2Ueq(C).
details are summarized in Table 2Supporting information
CCDC reference: 1030398
10.1107/S1600536814023265/hg5411sup1.cif
contains datablock I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536814023265/hg5411Isup2.hkl
Supporting information file. DOI: 10.1107/S1600536814023265/hg5411Isup3.cml
The title compound is a dithiocarbamate ester derivative of 3-(2-bromacetyl) phenyl benzoate, a key starting material used in the synthesis of phenylephrine, (R)-3-[-1-hydroxy-2-(methylamino)ethyl] phenol, which is a selective α1-adrenergic receptor agonist used primarily as a decongestant and as an agent to dilate the pupil and to increase blood pressure. Our current research work is aimed at the synthesis of a series of 3-(2-bromacetyl) phenyl benzoate dithiocarbamate ester derivatives. Dithiocarbamate acid exhibit a range of biological effects, including anti-bacterial, anti-fungal and anti-oxidant activity (Hirschelman et al., 2002) and inhibition of cardiac hypertrophy (Naoto et al. 2008). Recently, it was found that 5-oxohexyl dithiocarbamic acid methyl are potent phase II enzyme inducers, which could be used as cancer chemo-preventive agents (Scozzafava et al., 2000).
In the molecular structure of the title compound, the morpholine ring adopts the expected chair conformation. The phenyl ring makes dihedral angles of 67.97 (4) and 7.74 (3)° respectively with phenyl ring and the morpholine mean plane. This is also reflected in the deviation of the torsion angles C5—S1—C6—C7 = 175.32 (2) and C12—O3—C14—C15 = -178.91 (3)°. Weak intramolecular C—H···S hydrogen bonds exist within the morpholyl dithiocarbamate moiety (Table 1).
In the crystal, molecules are linked by weak C—H···O hydrogen bonds, forming zigzag chains along the b axis. C—H···π interactions link centrosymmetrically related molecules, reinforcing the three-dimensional structure (Fig. 2)
A search of the Cambridge Structural Database (Version 5.35, updates February 2014; Groom & Allen, 2014) for 2-(4-methoxyphenyl)-2-oxoethyl dithiocarbamate gave one hit, namely GEGGUV01 (Jian et al., 2006). A search for 2-oxoethyl dithioformate gave two related structures, viz. 2-oxo-2-(2-oxo-2H-chromen-3-yl)ethyl pyrrolidine-1-carbodithioate (Kumar et al., 2013) and (6-methoxy-2-oxo-2H-chromen-4-yl)methyl morpholine-4-carbodithioate (Devarajegowda et al., 2013). Interestingly, dimer formation via C—H···O hydrogen bonds is a feature of the packing in these structures.
To a solution of NaOH (1 mmol) in 3 ml water was added to a mixture of morpholine (1 mmol) in ethanol (25 ml). After stirring at room temperature for about 20 min, carbon disulfide (1.2 mmol) was added dropwise and the resulting mixture was further stirred at room temperature for 90 min. Then 3-(2-bromacetyl) phenyl benzoate (1 mmol) was added and stirring was continued. After completion of the reaction (monitored by TLC), the solvent was removed under vacuum and the residue was extracted with dichloromethane (2 × 25 ml) and dried over anhydrous MgSO4. The solvent was evaporated and the compound recrystallized from an ethanol–chloroform mixture (3:1) to give the title compound as colourless crystals in 81% yield.
Off-white solid, IR (KBr) νmax/cm-1: 2857, 3073 (C—H aliphatic and aromatic), 1732 (C═O), 1421, 1680 (C═C),1264 (C—O), 1228 (C═S), 1061 (C—N). 1H NMR (300 MHz, CDCl3): δ 3.77–3.80 (t, 4H), 4.23–4.43 (t, 4H), 4.91(s, 2H), 7.26–7.47 (m, 1H), 7.48–7.51 (m, 2H), 7.53–7.60 (m, 1H), 7.63–768 (m, 1H), 7.90–7.91 (t, 1H), 7.99–8.02 (d, 1H), 8.20–8.22 (d, 2H); 13C NMR (75 MHz, CDCl3): δ 44.6 (C6), 49.5 (C2, C3), 65.6 (C1, C4), 121.83 (C13), 126.0 (C9), 127.1 (C11), 128.6 (C10), 129.8 (C17, C19), 130.2 (C15, C16, C20), 137.6 (C18), 151.2 (C8), 154.93 (C12), 182.82 (C14), 192.15 (C7), 195.75 (C5); MS m/z: 402.10 [M + H]+. Analysis calculated (%) for C20H19NO4S2: C 59.83, H 4.77, N 3.49, S 15.97%; found: C 59.72, H 4.85, N 3.61, S 15.94.
Data collection: SMART (Bruker, 1998); cell
SMART (Bruker, 1998); data reduction: SAINT (Bruker, 1998); program(s) used to solve structure: SIR92 (Altomare et al., 1993); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012) and CAMERON (Watkin et al., 1993); software used to prepare material for publication: PARST (Nardelli, 1995) and PLATON (Spek, 2009).Fig. 1. The molecular structure of the title compound, showing 50% displacement ellipsoids. Fig. 2. Packing diagram of the title compound, with C—H···O and C—H···π interactions indicated by dashed lines. |
C20H19NO4S2 | Z = 4 |
Mr = 401.48 | F(000) = 840 |
Monoclinic, P21/c | Dx = 1.403 Mg m−3 |
Hall symbol: -P 2ybc | Mo Kα radiation, λ = 0.71073 Å |
a = 19.5521 (7) Å | θ = 1.5° |
b = 5.3649 (2) Å | µ = 0.31 mm−1 |
c = 18.5142 (6) Å | T = 296 K |
β = 101.816 (2)° | Block, colourless |
V = 1900.90 (12) Å3 | 0.35 × 0.31 × 0.25 mm |
Bruker SMART CCD area-detector diffractometer | 3539 independent reflections |
Radiation source: fine-focus sealed tube | 2613 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.024 |
ϕ and ω scans | θmax = 25.5°, θmin = 1.1° |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −23→21 |
Tmin = 0.887, Tmax = 0.934 | k = −6→6 |
12830 measured reflections | l = −22→22 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.042 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.122 | H-atom parameters constrained |
S = 1.06 | w = 1/[σ2(Fo2) + (0.0581P)2 + 0.4768P] where P = (Fo2 + 2Fc2)/3 |
3539 reflections | (Δ/σ)max = 0.001 |
244 parameters | Δρmax = 0.31 e Å−3 |
0 restraints | Δρmin = −0.22 e Å−3 |
C20H19NO4S2 | V = 1900.90 (12) Å3 |
Mr = 401.48 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 19.5521 (7) Å | µ = 0.31 mm−1 |
b = 5.3649 (2) Å | T = 296 K |
c = 18.5142 (6) Å | 0.35 × 0.31 × 0.25 mm |
β = 101.816 (2)° |
Bruker SMART CCD area-detector diffractometer | 3539 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | 2613 reflections with I > 2σ(I) |
Tmin = 0.887, Tmax = 0.934 | Rint = 0.024 |
12830 measured reflections |
R[F2 > 2σ(F2)] = 0.042 | 0 restraints |
wR(F2) = 0.122 | H-atom parameters constrained |
S = 1.06 | Δρmax = 0.31 e Å−3 |
3539 reflections | Δρmin = −0.22 e Å−3 |
244 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
S1 | 0.13247 (3) | 1.07076 (13) | 0.54256 (3) | 0.0473 (2) | |
S2 | 0.23625 (3) | 1.18442 (16) | 0.68201 (4) | 0.0652 (3) | |
O1 | 0.00887 (10) | 1.6886 (4) | 0.68361 (10) | 0.0733 (6) | |
O2 | 0.14049 (8) | 0.7580 (4) | 0.42396 (9) | 0.0697 (6) | |
O3 | 0.42171 (7) | 0.3229 (3) | 0.54362 (8) | 0.0483 (4) | |
O4 | 0.39360 (9) | −0.0264 (4) | 0.59595 (10) | 0.0741 (6) | |
N1 | 0.10421 (9) | 1.3302 (4) | 0.65235 (10) | 0.0531 (6) | |
C1 | 0.00244 (13) | 1.5923 (6) | 0.61218 (14) | 0.0639 (8) | |
H1A | 0.0271 | 1.7004 | 0.5841 | 0.077* | |
H1B | −0.0465 | 1.5919 | 0.588 | 0.077* | |
C2 | 0.03069 (12) | 1.3339 (5) | 0.61164 (14) | 0.0614 (8) | |
H2A | 0.003 | 1.2205 | 0.6347 | 0.074* | |
H2B | 0.0282 | 1.2798 | 0.5612 | 0.074* | |
C3 | 0.11178 (14) | 1.4422 (6) | 0.72615 (13) | 0.0636 (8) | |
H3A | 0.161 | 1.4564 | 0.7487 | 0.076* | |
H3B | 0.0899 | 1.3352 | 0.7571 | 0.076* | |
C4 | 0.07911 (14) | 1.6908 (6) | 0.72117 (15) | 0.0684 (8) | |
H4A | 0.0816 | 1.7552 | 0.7706 | 0.082* | |
H4B | 0.1053 | 1.8027 | 0.6959 | 0.082* | |
C5 | 0.15653 (11) | 1.2086 (5) | 0.63120 (11) | 0.0413 (5) | |
C6 | 0.20694 (11) | 0.8751 (5) | 0.54092 (12) | 0.0456 (6) | |
H6A | 0.2483 | 0.9771 | 0.5431 | 0.055* | |
H6B | 0.215 | 0.7648 | 0.5833 | 0.055* | |
C7 | 0.19298 (11) | 0.7242 (5) | 0.47079 (12) | 0.0452 (6) | |
C8 | 0.24493 (10) | 0.5309 (4) | 0.46121 (11) | 0.0395 (5) | |
C9 | 0.22848 (12) | 0.3671 (5) | 0.40227 (11) | 0.0479 (6) | |
H9 | 0.1857 | 0.3808 | 0.3696 | 0.058* | |
C10 | 0.27482 (12) | 0.1849 (5) | 0.39175 (12) | 0.0526 (7) | |
H10 | 0.263 | 0.075 | 0.3523 | 0.063* | |
C11 | 0.33890 (12) | 0.1638 (5) | 0.43933 (12) | 0.0483 (6) | |
H11 | 0.3705 | 0.0409 | 0.4323 | 0.058* | |
C12 | 0.35499 (10) | 0.3272 (5) | 0.49695 (11) | 0.0419 (6) | |
C13 | 0.30942 (10) | 0.5091 (4) | 0.50962 (11) | 0.0414 (5) | |
H13 | 0.3214 | 0.616 | 0.5498 | 0.05* | |
C14 | 0.43558 (11) | 0.1310 (5) | 0.59189 (11) | 0.0420 (5) | |
C15 | 0.50633 (10) | 0.1476 (4) | 0.63896 (11) | 0.0372 (5) | |
C16 | 0.52631 (11) | −0.0360 (5) | 0.69145 (12) | 0.0453 (6) | |
H16 | 0.4962 | −0.1674 | 0.695 | 0.054* | |
C17 | 0.59067 (12) | −0.0250 (5) | 0.73859 (12) | 0.0504 (6) | |
H17 | 0.604 | −0.149 | 0.7738 | 0.061* | |
C18 | 0.63503 (12) | 0.1690 (5) | 0.73352 (13) | 0.0513 (6) | |
H18 | 0.6783 | 0.1772 | 0.7656 | 0.062* | |
C19 | 0.61594 (12) | 0.3512 (5) | 0.68132 (14) | 0.0541 (7) | |
H19 | 0.6464 | 0.4817 | 0.678 | 0.065* | |
C20 | 0.55158 (11) | 0.3418 (5) | 0.63371 (12) | 0.0469 (6) | |
H20 | 0.5388 | 0.4654 | 0.5983 | 0.056* |
U11 | U22 | U33 | U12 | U13 | U23 | |
S1 | 0.0349 (3) | 0.0585 (5) | 0.0456 (3) | 0.0066 (3) | 0.0015 (2) | −0.0034 (3) |
S2 | 0.0367 (3) | 0.0894 (6) | 0.0619 (4) | 0.0102 (3) | −0.0081 (3) | −0.0198 (4) |
O1 | 0.0666 (12) | 0.0761 (15) | 0.0765 (12) | 0.0228 (11) | 0.0129 (10) | −0.0131 (11) |
O2 | 0.0453 (10) | 0.0814 (15) | 0.0702 (11) | 0.0143 (10) | −0.0169 (8) | −0.0206 (10) |
O3 | 0.0345 (8) | 0.0437 (11) | 0.0624 (9) | −0.0025 (7) | −0.0006 (7) | 0.0083 (8) |
O4 | 0.0600 (11) | 0.0719 (15) | 0.0788 (12) | −0.0315 (11) | −0.0128 (9) | 0.0217 (10) |
N1 | 0.0410 (11) | 0.0666 (16) | 0.0477 (11) | 0.0127 (10) | −0.0001 (8) | −0.0080 (10) |
C1 | 0.0484 (15) | 0.071 (2) | 0.0681 (17) | 0.0092 (14) | 0.0027 (12) | 0.0023 (15) |
C2 | 0.0393 (13) | 0.076 (2) | 0.0649 (15) | 0.0129 (13) | 0.0018 (11) | −0.0099 (14) |
C3 | 0.0595 (16) | 0.080 (2) | 0.0498 (14) | 0.0117 (15) | 0.0066 (11) | −0.0060 (14) |
C4 | 0.0686 (19) | 0.069 (2) | 0.0673 (17) | 0.0034 (16) | 0.0121 (14) | −0.0146 (15) |
C5 | 0.0359 (11) | 0.0424 (15) | 0.0444 (11) | 0.0010 (10) | 0.0051 (9) | 0.0039 (10) |
C6 | 0.0334 (11) | 0.0534 (17) | 0.0481 (12) | 0.0039 (11) | 0.0041 (9) | −0.0035 (11) |
C7 | 0.0341 (12) | 0.0490 (17) | 0.0492 (12) | −0.0040 (11) | 0.0004 (9) | −0.0029 (11) |
C8 | 0.0315 (11) | 0.0433 (15) | 0.0427 (11) | −0.0051 (10) | 0.0049 (9) | −0.0010 (10) |
C9 | 0.0429 (13) | 0.0561 (18) | 0.0417 (12) | −0.0031 (12) | 0.0014 (10) | −0.0037 (11) |
C10 | 0.0560 (15) | 0.0570 (19) | 0.0434 (12) | 0.0016 (13) | 0.0064 (11) | −0.0101 (11) |
C11 | 0.0477 (13) | 0.0488 (17) | 0.0499 (13) | 0.0060 (11) | 0.0134 (10) | −0.0011 (11) |
C12 | 0.0310 (11) | 0.0450 (16) | 0.0485 (12) | −0.0035 (10) | 0.0055 (9) | 0.0031 (10) |
C13 | 0.0357 (11) | 0.0413 (15) | 0.0447 (12) | −0.0064 (10) | 0.0024 (9) | −0.0039 (10) |
C14 | 0.0400 (12) | 0.0404 (16) | 0.0456 (12) | −0.0030 (11) | 0.0089 (9) | −0.0027 (10) |
C15 | 0.0344 (11) | 0.0326 (14) | 0.0449 (11) | 0.0006 (10) | 0.0092 (9) | −0.0050 (10) |
C16 | 0.0441 (13) | 0.0379 (15) | 0.0546 (13) | −0.0026 (11) | 0.0121 (10) | 0.0023 (11) |
C17 | 0.0482 (14) | 0.0488 (18) | 0.0527 (13) | 0.0085 (12) | 0.0066 (11) | 0.0091 (11) |
C18 | 0.0379 (13) | 0.0547 (18) | 0.0571 (14) | 0.0041 (12) | 0.0004 (10) | −0.0041 (12) |
C19 | 0.0384 (13) | 0.0465 (18) | 0.0740 (16) | −0.0093 (11) | 0.0039 (11) | 0.0008 (13) |
C20 | 0.0410 (13) | 0.0383 (16) | 0.0592 (14) | −0.0014 (11) | 0.0054 (10) | 0.0063 (11) |
S1—C5 | 1.774 (2) | C6—H6B | 0.97 |
S1—C6 | 1.800 (2) | C7—C8 | 1.487 (3) |
S2—C5 | 1.653 (2) | C8—C9 | 1.387 (3) |
O1—C1 | 1.401 (3) | C8—C13 | 1.394 (3) |
O1—C4 | 1.407 (3) | C9—C10 | 1.374 (3) |
O2—C7 | 1.214 (2) | C9—H9 | 0.93 |
O3—C14 | 1.354 (3) | C10—C11 | 1.381 (3) |
O3—C12 | 1.410 (2) | C10—H10 | 0.93 |
O4—C14 | 1.191 (3) | C11—C12 | 1.367 (3) |
N1—C5 | 1.338 (3) | C11—H11 | 0.93 |
N1—C3 | 1.472 (3) | C12—C13 | 1.374 (3) |
N1—C2 | 1.480 (3) | C13—H13 | 0.93 |
C1—C2 | 1.493 (4) | C14—C15 | 1.479 (3) |
C1—H1A | 0.97 | C15—C16 | 1.382 (3) |
C1—H1B | 0.97 | C15—C20 | 1.383 (3) |
C2—H2A | 0.97 | C16—C17 | 1.378 (3) |
C2—H2B | 0.97 | C16—H16 | 0.93 |
C3—C4 | 1.474 (4) | C17—C18 | 1.370 (3) |
C3—H3A | 0.97 | C17—H17 | 0.93 |
C3—H3B | 0.97 | C18—C19 | 1.371 (3) |
C4—H4A | 0.97 | C18—H18 | 0.93 |
C4—H4B | 0.97 | C19—C20 | 1.382 (3) |
C6—C7 | 1.507 (3) | C19—H19 | 0.93 |
C6—H6A | 0.97 | C20—H20 | 0.93 |
C5—S1—C6 | 101.33 (10) | C8—C7—C6 | 118.02 (18) |
C1—O1—C4 | 111.06 (19) | C9—C8—C13 | 119.1 (2) |
C14—O3—C12 | 116.89 (17) | C9—C8—C7 | 118.78 (19) |
C5—N1—C3 | 122.22 (19) | C13—C8—C7 | 122.1 (2) |
C5—N1—C2 | 125.35 (19) | C10—C9—C8 | 120.6 (2) |
C3—N1—C2 | 111.70 (18) | C10—C9—H9 | 119.7 |
O1—C1—C2 | 112.8 (2) | C8—C9—H9 | 119.7 |
O1—C1—H1A | 109 | C9—C10—C11 | 120.4 (2) |
C2—C1—H1A | 109 | C9—C10—H10 | 119.8 |
O1—C1—H1B | 109 | C11—C10—H10 | 119.8 |
C2—C1—H1B | 109 | C12—C11—C10 | 118.6 (2) |
H1A—C1—H1B | 107.8 | C12—C11—H11 | 120.7 |
N1—C2—C1 | 109.3 (2) | C10—C11—H11 | 120.7 |
N1—C2—H2A | 109.8 | C11—C12—C13 | 122.4 (2) |
C1—C2—H2A | 109.8 | C11—C12—O3 | 120.3 (2) |
N1—C2—H2B | 109.8 | C13—C12—O3 | 117.27 (19) |
C1—C2—H2B | 109.8 | C12—C13—C8 | 118.9 (2) |
H2A—C2—H2B | 108.3 | C12—C13—H13 | 120.6 |
N1—C3—C4 | 110.6 (2) | C8—C13—H13 | 120.6 |
N1—C3—H3A | 109.5 | O4—C14—O3 | 122.2 (2) |
C4—C3—H3A | 109.5 | O4—C14—C15 | 125.4 (2) |
N1—C3—H3B | 109.5 | O3—C14—C15 | 112.34 (19) |
C4—C3—H3B | 109.5 | C16—C15—C20 | 119.5 (2) |
H3A—C3—H3B | 108.1 | C16—C15—C14 | 117.8 (2) |
O1—C4—C3 | 113.0 (2) | C20—C15—C14 | 122.6 (2) |
O1—C4—H4A | 109 | C17—C16—C15 | 120.3 (2) |
C3—C4—H4A | 109 | C17—C16—H16 | 119.8 |
O1—C4—H4B | 109 | C15—C16—H16 | 119.8 |
C3—C4—H4B | 109 | C18—C17—C16 | 119.8 (2) |
H4A—C4—H4B | 107.8 | C18—C17—H17 | 120.1 |
N1—C5—S2 | 124.08 (17) | C16—C17—H17 | 120.1 |
N1—C5—S1 | 113.60 (15) | C17—C18—C19 | 120.3 (2) |
S2—C5—S1 | 122.32 (13) | C17—C18—H18 | 119.8 |
C7—C6—S1 | 108.88 (15) | C19—C18—H18 | 119.8 |
C7—C6—H6A | 109.9 | C18—C19—C20 | 120.3 (2) |
S1—C6—H6A | 109.9 | C18—C19—H19 | 119.9 |
C7—C6—H6B | 109.9 | C20—C19—H19 | 119.9 |
S1—C6—H6B | 109.9 | C19—C20—C15 | 119.7 (2) |
H6A—C6—H6B | 108.3 | C19—C20—H20 | 120.2 |
O2—C7—C8 | 121.2 (2) | C15—C20—H20 | 120.2 |
O2—C7—C6 | 120.8 (2) |
Cg is the centroid of the C15–C20 ring. |
D—H···A | D—H | H···A | D···A | D—H···A |
C2—H2B···S1 | 0.97 | 2.41 | 2.938 (2) | 114 |
C3—H3A···S2 | 0.97 | 2.56 | 3.052 (5) | 111 |
C13—H13···O4i | 0.93 | 2.43 | 3.224 (3) | 143 |
C11—H11···Cgii | 0.93 | 2.88 | 3.629 (2) | 138 |
Symmetry codes: (i) x, y+1, z; (ii) −x+1, −y, −z+1. |
Cg is the centroid of the C15–C20 ring. |
D—H···A | D—H | H···A | D···A | D—H···A |
C2—H2B···S1 | 0.9700 | 2.4100 | 2.938 (2) | 114.00 |
C3—H3A···S2 | 0.9700 | 2.5600 | 3.052 (5) | 111.00 |
C13—H13···O4i | 0.9300 | 2.4300 | 3.224 (3) | 143.00 |
C11—H11···Cgii | 0.9300 | 2.8800 | 3.629 (2) | 138.00 |
Symmetry codes: (i) x, y+1, z; (ii) −x+1, −y, −z+1. |
Experimental details
Crystal data | |
Chemical formula | C20H19NO4S2 |
Mr | 401.48 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 296 |
a, b, c (Å) | 19.5521 (7), 5.3649 (2), 18.5142 (6) |
β (°) | 101.816 (2) |
V (Å3) | 1900.90 (12) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.31 |
Crystal size (mm) | 0.35 × 0.31 × 0.25 |
Data collection | |
Diffractometer | Bruker SMART CCD area-detector diffractometer |
Absorption correction | Multi-scan (SADABS; Sheldrick, 1996) |
Tmin, Tmax | 0.887, 0.934 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 12830, 3539, 2613 |
Rint | 0.024 |
(sin θ/λ)max (Å−1) | 0.606 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.042, 0.122, 1.06 |
No. of reflections | 3539 |
No. of parameters | 244 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.31, −0.22 |
Computer programs: SMART (Bruker, 1998), SAINT (Bruker, 1998), SIR92 (Altomare et al., 1993), SHELXL97 (Sheldrick, 2008), ORTEP-3 for Windows (Farrugia, 2012) and CAMERON (Watkin et al., 1993), PARST (Nardelli, 1995) and PLATON (Spek, 2009).
Acknowledgements
The authors thank the University's Sophisticated Instrumentation Centre (USIC), Karnatak University, Dharwad, for the CCD X-ray facilities, X-ray data collection, GCMS, IR, CHNS and NMR data. SPA is grateful to Karnatak Science College, Dharwad, for providing laboratory facilities.
References
Altomare, A., Cascarano, G., Giacovazzo, C. & Guagliardi, A. (1993). J. Appl. Cryst. 26, 343–350. CrossRef Web of Science IUCr Journals Google Scholar
Bruker (1998). SMART and SAINT. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Devarajegowda, H. C., Kumar, K. M., Seenivasa, S., Arunkashi, H. K. & Kotresh, O. (2013). Acta Cryst. E69, o192. CSD CrossRef IUCr Journals Google Scholar
Farrugia, L. J. (2012). J. Appl. Cryst. 45, 849–854. Web of Science CrossRef CAS IUCr Journals Google Scholar
Groom, C. R. & Allen, F. H. (2014). Angew. Chem. Int. Ed. 53, 662–671. Web of Science CrossRef CAS Google Scholar
Hirschelman, W. H., Kosmeder, J. W. II, Song, L. S., Park, E. J., Moriarty, R. M. & Pezzuto, J. M. (2002). 224th ACS National Meeting: Division of Medicinal Chemistry, 178. Google Scholar
Jian, F., Xiao, H., Zhu, C. & Xu, L. (2006). J. Heterocycl. Chem. 43, 925–929. CrossRef CAS Google Scholar
Kumar, K. M., Mahabhaleshwaraiah, N. M., Kotresh, O., Roopashree, K. R. & Devarajegowda, H. C. (2013). Acta Cryst. E69, o1382. CSD CrossRef IUCr Journals Google Scholar
Naoto, O., Mariko, O., Takashi, S., Satoshi, K., Atsuko, M., Noriaki, U., Yoshisuke, N., Keishi, K., Masamori, S. & Yushi, K. (2008). PCT Int. Appl. WO 2008029825/A1 20080313. Google Scholar
Nardelli, M. (1995). J. Appl. Cryst. 28, 659. CrossRef IUCr Journals Google Scholar
Scozzafava, A., Mastrolorenzo, A. & Supuran, C. T. (2000). Bioorg. Med. Chem. Lett. 10, 1887–1891. Web of Science CrossRef PubMed CAS Google Scholar
Sheldrick, G. M. (1996). SADABS. University of Göttingen, Germany. Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Spek, A. L. (2009). Acta Cryst. D65, 148–155. Web of Science CrossRef CAS IUCr Journals Google Scholar
Watkin, D. M., Pearce, L. & Prout, C. K. (1993). CAMERON. Chemical Crystallography Laboratory, University of Oxford, England. Google Scholar
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