research communications
R)-D-ribit-1-ylsulfonate
of potassium (1aSchool of Chemistry, University of East Anglia, Norwich NR4 7TJ, England
*Correspondence e-mail: a.haines@uea.ac.uk, d.l.hughes@uea.ac.uk
The title compound, K+·C5H11O8S− [systematic name: potassium (1R,2R,3R,4R)-1,2,3,4,5-pentahydroxypentane-1-sulfonate], formed by reaction of D-ribose with potassium hydrogen sulfite in water, crystallizes as colourless plates. The anion has an open-chain structure in which the S atom and the C atoms of the sugar chain, excepting that of the hydroxymethyl group, form an essentially all-trans chain; the C atom of the hydroxymethyl group lies in a gauche relationship with the three contiguous C atoms. Through complex cation coordination (through seven oxygen atoms of six different anions) and intermolecular O—H⋯O hydrogen bonding, a three-dimensional bonding network exists in the crystal structure.
Keywords: crystal structure; D-ribose bisulfite adduct; potassium hydrogen sulfite; potassium metabisulfite.
CCDC reference: 1007337
1. Chemical context
Addition compounds formed between et al., 2012). Less well known is the fact that despite existing preferentially in the hemiacetal form, can react with the bisulfite anion to give open-chain adducts which, as chiral hydroxysulfonic acids, have potentially useful but largely unexplored applications in synthesis. The knowledge of such compounds was initially centred on the their possible role in the stabilization of food stuffs (Gehman & Osman, 1954) (note: nearly all wines are labelled `contains sulfites') and evidence for their acyclic nature was first provided by Ingles (1959), who prepared such adducts from D-glucose, D-galactose, D-mannose, L-arabinose and L-rhamnose. However, conclusive proof for their acyclic structure awaited X-ray studies, initially by Cole et al. (2001) who reported the crystal structures of D-glucose- and D-mannose-derived potassium sulfonates, and later we studied the sodium sulfonate derived from D-glucose (Haines & Hughes, 2012) and the potassium sulfonate from D-galactose (Haines & Hughes, 2010) by X-ray crystallography. The of the potassium bisulfite adduct of dehydro-L-ascorbic acid, first prepared by Ingles (1959), has also been reported (Haines & Hughes, 2013).
and the bisulfite anion have found use in purification of liquid when, as is often the case, the adduct is crystalline, in facilitating cyanohydrin formation, and also in conferring required water solubility to certain hydrophobic compounds (ClaydenC-Sulfonic acid derivatives of have been prepared at non-glycosidic atoms by the radical-mediated addition of the bisulfite ion to methyl 6-deoxyhexopyranosid-5-enes (e.g. in the synthesis of 6-sulfoquinovose; Lehmann & Benson, 1964), by trifluoromethanesulfonate-mediated nucleophilic displacement reactions with the bisulfite ion (Lipták et al., 2004) or by oxidation of a thioacetyl substituent on a protected glycose (Lipták et al., 2004). Although oxidation of C1-thioesters of protected affords a route to C1-sulfonic acids, the facile preparation of the bisulfite adducts of certain provides an attractive route to chiral hydroxysulfonic acids, which merit further exploration as possible synthetic intermediates.
Preparation of aldose adducts requires reaction at high concentrations, with the bisulfite anion produced in situ by hydrolysis of the corresponding metabisulfite. Obtaining suitable material for X-ray crystallography is not always straightforward, either in the initiation of crystallization or in isolating crystals of suitable quality. We report here the preparation in crystalline form of the hitherto unknown potassium bisulfite adduct from D-ribose, (1), and its solid-state structure.
2. Structural commentary
The anion has an open-chain structure in which carbons C1 to C4 together with O4, S and O13 form an essentially all-trans chain (Fig. 1), with the newly formed chiral centre at C1 having the R-configuration. The for the salt is potassium (1R,2R,3R,4R)-1,2,3,4,5-pentahydroxypentane-1-sulfonate. The torsion angle C2—C3—C4—C5 is indicative of a gauche conformation with C5 pointing out of the all-trans chain. All of the hydroxyl groups form O—H⋯O hydrogen bonds and all, except for the hydrogen bond from O2, have short H⋯O distances with O—H⋯O angles not far from linear (Table 1); the O2 hydrogen bond is towards the upper limit in terms of H⋯O distance with an angle of 132 (2)° at H2O. The potassium ions are seven-coordinate with K—O bonds to six separate anions; the K—O bond lengths lie in the range of 2.7383 (10) to 3.0085 (11) and are arranged in an approximately pentagonal–bipyramidal form with O4 and O4iv as the apical atoms. This is shown in Fig. 2, a view approximately along the a axis, indicating the hydrogen-bonding contacts and the K—O coordinate bonds. Potassium ions can show various coordination numbers in related coordination environments: in the D-galactose bisulfite (Haines & Hughes, 2010), D-glucose bisulfite (Cole et al. 2001; Haines & Hughes, 2012) and dehydro-L-ascorbic acid bisulfite (Haines & Hughes, 2013) adducts, the potassium ion is, respectively, six-, seven-, and eight-coordinate.
Fig. 3, a view down the c axis, indicates the parallel alignment of the open-chain ions and Fig. 4 illustrates a section parallel to the ab plane showing the linking of the potassium ions in that plane.
High-resolution m/z 231.0187 but the base peak was at m/z 213.0082, representing loss of water from the A large peak was also observed at 299.0987 for C10H19O10, which corresponds to the ion of the product formed by reaction between (1) and D-ribose with displacement of potassium bisulfite; in the aqueous solution used for MS analysis, some decomposition of (1) to afford D-ribose undoubtedly occurs and this is supported by NMR data on the aqueous solution reported below.
in negative-ion mode identified the anion atThe 1H NMR spectrum of (1) in D2O indicates considerable stability of the adduct in aqueous solution, with the species α-furanose, β-furanose, β-pyranose, α-pyranose, and bisulfite adduct, identified by their H-1 resonances, present in the % ratios of 3.6:6.2:10.9:5.1:74.2, which changed only marginally after 18 days. A complete assignment of the spectrum for (1) and consideration of derived coupling constants indicated overall similarity of the conformation in the crystalline state and in solution. Notably, J1,2 was close to zero and assuming angles of 120° and using measured torsional angles, a Karplus relationship suggests a value of about 0.3 Hz. The value J2,3 = 8.6 Hz is in accord with an antiperiplanar arrangement of H2 and H3, whereas J3,4 = 4.6 Hz is consistent with the synclinal disposition of H3 and H4, resulting from a gauche arrangement for C2—C3—C4—C5.
The 13C NMR spectrum confirmed the presence of the four ring forms of D-ribose as indicated by their C1 signals and the major peak for C1 in the adduct at δC 82.25 was accompanied by a much smaller peak at δC 84.19 which suggests the presence in solution of the diastereoisomer of (1) having the S-configuration at C1.
3. Supramolecular features
A three-dimensional network exists in the R-diastereomer was present in the crystal studied.
through the coordination of each potassium cation (overall seven coordinate) to six different ribose bisulfite residues and through extensive hydrogen bonding between hydroxy hydrogens and oxygen atoms of hydroxyl groups or those on sulfur. Although the addition of the sulfite anion to C1 of the ribose moiety can theoretically afford two isomers, only the4. Synthesis, crystallization and spectroscopic analysis
Water (0.5 ml) was added to potassium metabisulfite (0.37 g), which did not dissolve completely even on warming but which appeared to change its crystalline form as it underwent hydrolysis to yield potassium hydrogen sulfite. To this suspension was added a solution of D-ribose (0.5 g) in water (0.35 ml), leading to immediate and complete solution of the reaction mixture. Seed crystals were obtained by complete evaporation of a small proportion of the solution, and these were added to the bulk of the solution which was then stored at 277 K, leading to the formation of large, well-separated crystals. The syrupy nature of the mother liquor required its removal with a Pasteur pipette, after which the crystals were dried by pressing between filter papers, to give potassium (1R)-D-ribit-1-ylsulfonate, m.p. 396–400 K (with decomposition); [α]D −6.1 (15 min.) (c, 0.81 in 9:1 H2O:HOAc).
1H NMR (D2O, 400 MHz, reference Me3COH at δH 1.24): δ 5.37 (d, J1,2 = 3.8 Hz, H-1 of α-furanose), 5.24 (d, J1,2 = 1.8 Hz, H-1 of β-furanose), 4.92 (d, J1,2 = 6.5 Hz, H-1 of β-pyranose), 4.85 (d, J1,2 = 1.8 Hz, H-1 of α-pyranose); signals for acyclic sulfonate: δH 4.67 (s, H-1), 4.18 (d, J2,3 = 8.6 Hz, H-2), 3.94 (ddd, J3,4 = 4.6, J4,5a = 3.1, J4,5b = 7.4 Hz, H-4), 3.82 (dd, J5a,5b = −11.9 Hz, H-5a), 3.77 (dd, H-3), 3.69 (dd, H-5b). 13C NMR (D2O, 100 MHz, reference Me3COH at δC 30.29): δ 101.55 (C1, β-furanose), 96.89 (C1, α-furanose), 94.43 (C1, β-pyranose), 94.15 (C1, α-pyranose); signals for adduct: 82.25 (C1), 73.23, 71.88, 70.61 (C2, C3, C4), 62.56 (C5). A small but significant peak was observed at δC 84.19.
Integration of the various signals for H-1 in the 1H NMR spectrum, 5 minutes after sample dissolution, indicated the species α-furanose, β-furanose, β-pyranose, α-pyranose, bisulfite adduct were present in the % ratios of 3.6:6.2:10.9:5.1:74.2. Re-measurement after 18 days, gave these % ratios as 1.5:2.6:16.2:8.7:70.9.
HRESMS (negative-ion mode, measured in H2O/MeOH, solution) gave an expected peak at m/z 231.0187 ([C5H11O8S]−), the base peak at 213.0082 ([C5H11O8S−H2O]−) and a significant peak at 299.0987 ([C10H19O10]−). The last peak corresponds to the ion of the product formed by reaction between the bisulfite adduct and D-ribose with displacement of potassium bisulfite.
5. Refinement
Crystal data, data collection and structure . Hydrogen atoms bound to the carbon atoms were included in idealized positions (with C—H distances of 0.98 and 0.97 Å for methyne and methylene groups respectively) and their Uiso values were set to ride on the Ueq values of the parent atoms; hydroxyl hydrogen atoms were located in difference maps and were refined freely.
details are summarized in Table 2
|
Supporting information
CCDC reference: 1007337
10.1107/S1600536814022685/sj5424sup1.cif
contains datablocks 1, New_Global_Publ_Block. DOI:Structure factors: contains datablock 1. DOI: 10.1107/S1600536814022685/sj54241sup2.hkl
Supporting information file. DOI: 10.1107/S1600536814022685/sj54241sup3.cml
Addition compounds formed between
and the bisulfite anion have found use in purification of liquid when, as is often the case, the adduct is crystalline, in facilitating cyanohydrin formation, and also in conferring required water solubility to certain hydrophobic compounds (Clayden et al., 2012). Less well known is the fact that despite existing preferentially in the hemiacetal form, can react with the bisulfite anion to give open-chain adducts which, as chiral hydroxysulfonic acids, have potentially useful but largely unexplored applications in synthesis. The knowledge of such compounds was initially centred on the their possible role in the stabilization of food stuffs (Gehman & Osman, 1954) (note: nearly all wines are labelled `contains sulfites') and evidence for their acyclic nature was first provided by Ingles (1959), who prepared such adducts from D-glucose, D-galactose, D-mannose, L-arabinose and L-rhamnose. However, conclusive proof for their acyclic structure awaited X-ray studies, initially by Cole et al. (2001) who reported the solid-state structures of D-glucose- and D-mannose-derived potassium sulfonates, and later we studied the sodium sulfonate derived from D-glucose (Haines & Hughes, 2012) and the potassium sulfonate from D-galactose (Haines & Hughes, 2010) by X-ray crystallography. The solid-state structure of the potassium bisulfite adduct of dehydro-L-ascorbic acid, first prepared by Ingles (1959), has also been reported (Haines & Hughes, 2013).C-Sulfonic acid derivatives of
have been prepared at non-glycosidic centres by the radical-mediated addition of the bisulfite ion to methyl 6-deoxyhexopyranosid-5-enes (e.g. in the synthesis of 6-sulfoquinovose; Lehmann & Benson, 1964), by trifluoromethanesulfonate-mediated nucleophilic displacement reactions with the bisulfite ion (Lipták et al., 2004) or by oxidation of a thioacetyl substituent on a protected glycose (Lipták et al., 2004). Although oxidation of C1-thioesters of protected affords a route to C1-sulfonic acids, the facile preparation of the bisulfite adducts of certain provides an attractive route to chiral hydroxysulfonic acids, which merit further exploration as possible synthetic intermediates.Preparation of aldose adducts requires reaction at high concentrations, with the bisulfite anion produced in situ by hydrolysis of the corresponding metabisulfite. Obtaining suitable material for X-ray crystallography is not always straightforward, either in the initiation of crystallization or in isolating crystals of suitable quality. We report here the preparation in crystalline form of the hitherto unknown potassium bisulfite adduct from D-ribose, (1), and its solid-state structure.
\ Addition of a concentrated solution of D-ribose to a half-molar equivalent of potassium metabisulfite, suspended in a small amount of water, led to immediate solution and after seeding with material obtained by evaporation of a small amount of solution to dryness, large crystals of compound (1) gradually formed on storage at 277 K for several days, with m.p. 296–400 K (with decomposition).
X-ray analysis showed an anion with an open-chain structure in which carbons C1 to C4 together with O4, S and O13 form an essentially all-trans chain (Fig. 1), with the newly formed chiral centre at C1 having the R-configuration. The
for the salt is potassium (1R,2R,3R,4R)-1,2,3,4,5-pentahydroxypentane-1-\ sulfonate. The torsion angle C2—C3—C4—C5 is gauche with C5 pointing out of the all-trans chain. All of the hydroxyl groups form O—H···O hydrogen bonds and all, except for the hydrogen bond from O2, have short H···O distances with O—H···O angles not far from linear (Table 1); the O2 hydrogen bond is towards the upper limit in terms of H···O distance with an angle of 132 (2)° at H2O. The potassium ions are seven-coordinate with K—O bonds to six separate anions; the K—O bond lengths lie in the range of 2.7383 (10) to 3.0085 (11) and are arranged in an approximately pentagonal–bipyramidal form with O4 and O4iv as the apical atoms. This is shown in Fig. 2, a view approximately along the a axis, indicating the hydrogen-bonding contacts and the K—O coordinate bonds. Potassium ions can show a catholic taste in such coordinated situations – in the D-galactose bisulfite (Haines & Hughes, 2010), D-glucose bisulfite (Cole et al. 2001; Haines & Hughes, 2012) and dehydro-L-ascorbic acid bisulfite (Haines & Hughes, 2013) adducts, the potassium ion is, respectively, six-, seven-, and eight-coordinate.Fig. 3, a view down the c axis, indicates the parallel alignment of the open-chain ions and Fig. 4 illustrates a section parallel to the ab plane showing the linking of the potassium ions in that plane. Tables containing atomic parameters, molecular dimensions (bond lengths and angles and torsion angles) are included in the Supporting Information.
High-resolution
in negative-ion mode identified the anion at m/z 231.0187 but the base peak was at m/z 213.0082, representing loss of water from the A large peak was also observed at 299.0987 for C10H19O10, which corresponds to the ion of the product formed by reaction between (1) and D-ribose with displacement of potassium bisulfite; in the aqueous solution used for MS analysis, some decomposition of (1) to afford D-ribose undoubtedly occurs and this is supported by NMR data on the aqueous solution reported below.The 1H NMR spectrum of (1) in D2O indicates considerable stability of the adduct in aqueous solution, with the species α-furanose, β-furanose, β-pyranose, α-pyranose, and bisulfite adduct, identified by their H-1 resonances, present in the % ratios of 3.6:6.2:10.9:5.1:74.2, which changed only marginally after 18 days. A complete assignment of the spectrum for (1) and consideration of derived coupling constants indicated overall similarity of the conformation in the crystalline state and in solution. Notably, J1,2 was close to zero and assuming angles of 120° and using measured torsional angles, a Karplus relationship suggests a value of about 0.3 Hz. The value J2,3 = 8.6 Hz is in accord with an antiperiplanar arrangement of H2 and H3, whereas J3,4 = 4.6 Hz is consistent with the synclinal disposition of H3 and H4, resulting from a gauche arrangement for C2—C3—C4—C5.
The 13C NMR spectrum confirmed the presence of the four ring forms of D-ribose as indicated by their C1 signals and the major peak for C1 in the adduct at δC 82.25 was accompanied by a much smaller peak at δC 84.19 which suggests the presence in solution of the diastereoisomer of (1) having the (S)-configuration at C1.
A three-dimensional network exists in the
through the coordination of each potassium cation (overall seven coordinate) to six different ribose bisulfite residues and through extensive hydrogen bonding between hydroxy hydrogens and oxygen atoms of hydroxyl groups or those on sulfur. Although the addition of the sulfite anion to C1 of the ribose moiety can theoretically afford two isomers, only the R-diastereomer is present in the crystal studied.Water (0.5 ml) was added to potassium metabisulfite (0.37 g), which did not dissolve completely even on warming but which appeared to change its crystalline form as it underwent hydrolysis to yield potassium hydrogen sulfite. To this suspension was added a solution of D-ribose (0.5 g) in water (0.35 ml), leading to immediate and complete solution of the reaction mixture. Seed crystals were obtained by complete evaporation of a small proportion of the solution, and these were added to the bulk of the solution which was then stored at 277 K, leading to the formation of large, well-separated crystals. The syrupy nature of the mother liquor required its removal with a Pasteur pipette, after which the crystals were dried by pressing between filter papers, to give potassium (1R)-D-ribit-1-ylsulfonate, m.p. 296–400 K (with decomposition); [α]D -6.1 (15 min.) (c, 0.81 in 9:1 H2O:HOAc). 1H NMR (D2O, 400 MHz, reference Me3COH at δH 1.24): δ 5.37 (d, J1,2 = 3.8 Hz, H-1 of α-furanose), 5.24 (d, J1,2 = 1.8 Hz, H-1 of β-furanose), 4.92 (d, J1,2 = 6.5 Hz, H-1 of β-pyranose), 4.85 (d, J1,2 = 1.8 Hz, H-1 of α-pyranose); signals for acyclic sulfonate: δH 4.67 (s, H-1), 4.18 (d, J2,3 = 8.6 Hz, H-2), 3.94 (ddd, J3,4 = 4.6, J4,5a = 3.1, J4,5b = 7.4 Hz, H-4), 3.82 (dd, J5a,5b = -11.9 Hz, H-5a), 3.77 (dd, H-3), 3.69 (dd, H-5b). 13C NMR (D2O, 100 MHz, reference Me3COH at δC 30.29): δ 101.55 (C1, β-furanose), 96.89 (C1, α-furanose), 94.43 (C1, β-pyranose), 94.15 (C1, α-pyranose); signals for adduct: 82.25 (C1), 73,23, 71.88, 70.61 (C2, C3, C4), 62.56 (C5). A small but significant peak was observed at δC 84.19.
Integration of the various signals for H-1 in the 1H NMR spectrum, 5 minutes after sample dissolution, indicated the species α-furanose, β-furanose, β-pyranose, α-pyranose, bisulfite adduct were present in the % ratios of 3.6:6.2:10.9:5.1:74.2. Re-measurement after 18 days, gave these % ratios as 1.5:2.6:16.2:8.7:70.9.
HRESMS (negative ion mode, measured in H2O/MeOH, solution) gave an expected peak at m/z 231.0187 ([C5H11O8S1]-), the base peak at 213.0082 ([C5H11O8S – H2O] -) and a significant peak at 299.0987 ([C10H19O10]-). The last peak corresponds to the ion of the product formed by reaction between the bisulfite adduct and D-ribose with displacement of potassium bisulfite.
Crystal data, data collection and structure
details are summarized in Table 2. The non-hydrogen atoms were refined with anisotropic thermal parameters. Hydrogen atoms bound to the carbon atoms were included in idealized positions (with C—H distances of 0.98 and 0.97Å for methyne and methylene groups respectively) and their Uiso values were set to ride on the Ueq values of the parent atoms; hydroxyl hydrogen atoms were located in difference maps and were refined freely.Data collection: CrysAlis PRO (Oxford Diffraction, 2011); cell
CrysAlis PRO (Oxford Diffraction, 2011); data reduction: CrysAlis PRO (Oxford Diffraction, 2011); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEPII (Johnson, 1976) and ORTEP-3 for Windows (Farrugia, 2012); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008) and WinGX (Farrugia, 2012).View of a molecule of potassium (1R)-D-ribit-1-ylsulfonate, indicating the atom-numbering scheme, showing the hydrogen bonds (dashed lines) from the anion and the coordination pattern around the potassium cation. Displacement ellipsoids are drawn at the 50% probability level. Symmetry codes: (i) -x, y + 1/2, -z + 1; (ii) x - 1, y, z - 1; (iii) -x + 1, y + 1/2, -z + 1; (iv) -x, y + 1/2, -z; (v) x, y, z - 1; (vi) x, y, z + 1; (vii) -x, y - 1/2, -z; (viii) x + 1, y, z + 1; (ix) -x + 1, y - 1/2, -z + 1; (x) -x, y - 1/2, -z + 1; (xi) x - 1, y, z; (xii) x + 1, y, z. View approximately along the a axis, showing the hydrogen-bonding contacts and all the K—O coordination bonds. View along the c axis, showing the parallel alignment of the open-chain ions and the interionic interactions. A section parallel to the ab plane around z = 0, showing the linking of the potassium ions in that plane; the connections are made through coordination bonds involving the sulfonate groups and the hydroxyl groups of O1 and O4. |
K+·C5H11O8S− | F(000) = 280 |
Mr = 270.30 | Dx = 1.946 Mg m−3 |
Monoclinic, P21 | Mo Kα radiation, λ = 0.71073 Å |
a = 5.36167 (8) Å | Cell parameters from 6553 reflections |
b = 9.01474 (14) Å | θ = 3.1–32.4° |
c = 9.78623 (17) Å | µ = 0.83 mm−1 |
β = 102.8138 (16)° | T = 140 K |
V = 461.23 (1) Å3 | Plate, colourless |
Z = 2 | 0.22 × 0.22 × 0.12 mm |
Oxford Diffraction Xcalibur 3/Sapphire3 CCD diffractometer | 2690 independent reflections |
Radiation source: Enhance (Mo) X-ray Source | 2632 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.023 |
Detector resolution: 16.0050 pixels mm-1 | θmax = 30.0°, θmin = 3.1° |
Thin–slice ϕ and ω scans | h = −7→7 |
Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2011) | k = −12→12 |
Tmin = 0.874, Tmax = 1.00 | l = −13→13 |
8864 measured reflections |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.021 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.053 | w = 1/[σ2(Fo2) + (0.0318P)2 + 0.0276P] where P = (Fo2 + 2Fc2)/3 |
S = 1.05 | (Δ/σ)max < 0.001 |
2690 reflections | Δρmax = 0.43 e Å−3 |
156 parameters | Δρmin = −0.22 e Å−3 |
1 restraint | Absolute structure: Flack (1983), 1264 Friedel pairs |
Primary atom site location: structure-invariant direct methods | Absolute structure parameter: −0.01 (3) |
K+·C5H11O8S− | V = 461.23 (1) Å3 |
Mr = 270.30 | Z = 2 |
Monoclinic, P21 | Mo Kα radiation |
a = 5.36167 (8) Å | µ = 0.83 mm−1 |
b = 9.01474 (14) Å | T = 140 K |
c = 9.78623 (17) Å | 0.22 × 0.22 × 0.12 mm |
β = 102.8138 (16)° |
Oxford Diffraction Xcalibur 3/Sapphire3 CCD diffractometer | 2690 independent reflections |
Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2011) | 2632 reflections with I > 2σ(I) |
Tmin = 0.874, Tmax = 1.00 | Rint = 0.023 |
8864 measured reflections |
R[F2 > 2σ(F2)] = 0.021 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.053 | Δρmax = 0.43 e Å−3 |
S = 1.05 | Δρmin = −0.22 e Å−3 |
2690 reflections | Absolute structure: Flack (1983), 1264 Friedel pairs |
156 parameters | Absolute structure parameter: −0.01 (3) |
1 restraint |
Experimental. Absorption correction: CrysAlisPro RED, Oxford Diffraction Ltd., Version 1.171.33.55 Empirical absorption correction using spherical harmonics, implemented in SCALE3 ABSPACK scaling algorithm. |
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
K | 0.00261 (5) | 0.45609 (3) | −0.05055 (3) | 0.01553 (7) | |
C1 | 0.2210 (2) | 0.19926 (14) | 0.68818 (13) | 0.0093 (2) | |
H1 | 0.1956 | 0.0932 | 0.6679 | 0.011* | |
C2 | 0.3088 (2) | 0.27375 (14) | 0.56579 (14) | 0.0096 (2) | |
H2 | 0.4902 | 0.2528 | 0.5714 | 0.012* | |
C3 | 0.1458 (2) | 0.21199 (15) | 0.42818 (13) | 0.0101 (2) | |
H3 | −0.0341 | 0.2168 | 0.4341 | 0.012* | |
C4 | 0.1759 (2) | 0.30205 (16) | 0.30071 (14) | 0.0114 (2) | |
H4 | 0.1205 | 0.4036 | 0.3142 | 0.014* | |
C5 | 0.4444 (2) | 0.31169 (16) | 0.27422 (14) | 0.0120 (2) | |
H5A | 0.4418 | 0.3791 | 0.1967 | 0.014* | |
H5B | 0.5569 | 0.3539 | 0.3564 | 0.014* | |
O1 | −0.01482 (18) | 0.26253 (12) | 0.69708 (11) | 0.0141 (2) | |
O2 | 0.26721 (19) | 0.42953 (10) | 0.56585 (11) | 0.01250 (19) | |
O3 | 0.2107 (2) | 0.05973 (11) | 0.41598 (12) | 0.0157 (2) | |
O4 | 0.01062 (18) | 0.24575 (13) | 0.17548 (10) | 0.0159 (2) | |
O5 | 0.54900 (19) | 0.17312 (11) | 0.24301 (11) | 0.01340 (19) | |
S | 0.44130 (5) | 0.22060 (3) | 0.85556 (3) | 0.00909 (7) | |
O11 | 0.48670 (19) | 0.37852 (11) | 0.87973 (11) | 0.0165 (2) | |
O12 | 0.67445 (18) | 0.13911 (12) | 0.84780 (11) | 0.01367 (19) | |
O13 | 0.30566 (18) | 0.15410 (12) | 0.95421 (11) | 0.0155 (2) | |
H1O | −0.095 (4) | 0.211 (3) | 0.743 (2) | 0.031 (6)* | |
H2O | 0.388 (4) | 0.464 (3) | 0.611 (2) | 0.030 (6)* | |
H3O | 0.087 (4) | 0.010 (3) | 0.410 (2) | 0.027 (6)* | |
H4O | −0.122 (5) | 0.221 (3) | 0.199 (3) | 0.046 (7)* | |
H5O | 0.460 (4) | 0.149 (2) | 0.159 (2) | 0.013 (4)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
K | 0.01277 (12) | 0.01544 (13) | 0.01879 (14) | 0.00082 (11) | 0.00440 (10) | −0.00328 (11) |
C1 | 0.0088 (5) | 0.0103 (6) | 0.0087 (5) | −0.0003 (4) | 0.0018 (4) | −0.0003 (4) |
C2 | 0.0093 (5) | 0.0087 (5) | 0.0112 (6) | 0.0001 (4) | 0.0028 (4) | 0.0016 (4) |
C3 | 0.0091 (5) | 0.0113 (6) | 0.0100 (5) | 0.0005 (4) | 0.0027 (4) | −0.0003 (5) |
C4 | 0.0106 (5) | 0.0138 (6) | 0.0098 (6) | 0.0011 (4) | 0.0023 (4) | −0.0016 (5) |
C5 | 0.0105 (5) | 0.0118 (6) | 0.0139 (6) | −0.0003 (4) | 0.0033 (4) | 0.0003 (5) |
O1 | 0.0078 (4) | 0.0192 (5) | 0.0157 (5) | 0.0023 (3) | 0.0037 (4) | 0.0052 (4) |
O2 | 0.0153 (4) | 0.0079 (5) | 0.0134 (4) | −0.0027 (3) | 0.0014 (4) | 0.0001 (3) |
O3 | 0.0184 (5) | 0.0084 (4) | 0.0216 (5) | −0.0032 (4) | 0.0076 (4) | −0.0020 (4) |
O4 | 0.0092 (4) | 0.0279 (6) | 0.0102 (4) | −0.0016 (4) | 0.0014 (3) | −0.0024 (4) |
O5 | 0.0114 (4) | 0.0154 (5) | 0.0136 (5) | 0.0017 (3) | 0.0033 (4) | −0.0007 (4) |
S | 0.00795 (12) | 0.01038 (14) | 0.00897 (13) | −0.00016 (10) | 0.00192 (9) | 0.00056 (11) |
O11 | 0.0176 (5) | 0.0121 (5) | 0.0182 (5) | −0.0016 (4) | 0.0005 (4) | −0.0026 (4) |
O12 | 0.0090 (4) | 0.0165 (5) | 0.0159 (5) | 0.0024 (3) | 0.0037 (3) | 0.0031 (4) |
O13 | 0.0133 (5) | 0.0230 (5) | 0.0112 (5) | −0.0024 (4) | 0.0047 (4) | 0.0029 (4) |
K—O13i | 2.7383 (10) | C4—C5 | 1.5210 (17) |
K—O11ii | 2.7873 (10) | C4—H4 | 0.9800 |
K—O12iii | 2.8519 (10) | C5—O5 | 1.4297 (17) |
K—O4iv | 2.8775 (12) | C5—H5A | 0.9700 |
K—O4 | 2.9065 (11) | C5—H5B | 0.9700 |
K—O11v | 2.9115 (11) | O1—Kvi | 3.0085 (11) |
K—O1v | 3.0085 (11) | O1—H1O | 0.83 (3) |
K—O13v | 3.1654 (11) | O2—H2O | 0.77 (2) |
K—O12ii | 3.3874 (11) | O3—H3O | 0.79 (2) |
K—Sv | 3.4412 (4) | O4—Kvii | 2.8775 (12) |
K—Sii | 3.6306 (4) | O4—H4O | 0.83 (3) |
K—Kiv | 4.6161 (1) | O5—H5O | 0.88 (2) |
C1—O1 | 1.4071 (15) | S—O11 | 1.4547 (10) |
C1—C2 | 1.5355 (17) | S—O13 | 1.4601 (10) |
C1—S | 1.8048 (13) | S—O12 | 1.4664 (10) |
C1—H1 | 0.9800 | S—Kvi | 3.4412 (4) |
C2—O2 | 1.4220 (15) | S—Kviii | 3.6306 (4) |
C2—C3 | 1.5380 (18) | O11—Kviii | 2.7873 (10) |
C2—H2 | 0.9800 | O11—Kvi | 2.9115 (10) |
C3—O3 | 1.4275 (16) | O12—Kix | 2.8519 (10) |
C3—C4 | 1.5266 (18) | O12—Kviii | 3.3874 (11) |
C3—H3 | 0.9800 | O13—Kx | 2.7383 (10) |
C4—O4 | 1.4364 (16) | O13—Kvi | 3.1654 (11) |
O13i—K—O11ii | 66.78 (3) | O1—C1—C2 | 107.84 (10) |
O13i—K—O12iii | 72.73 (3) | O1—C1—S | 108.47 (9) |
O11ii—K—O12iii | 137.05 (3) | C2—C1—S | 114.15 (8) |
O13i—K—O4iv | 66.10 (3) | O1—C1—H1 | 108.8 |
O11ii—K—O4iv | 101.19 (3) | C2—C1—H1 | 108.8 |
O12iii—K—O4iv | 74.01 (3) | S—C1—H1 | 108.8 |
O13i—K—O4 | 94.10 (3) | O2—C2—C1 | 110.87 (10) |
O11ii—K—O4 | 82.47 (3) | O2—C2—C3 | 107.40 (10) |
O12iii—K—O4 | 86.77 (3) | C1—C2—C3 | 108.16 (10) |
O4iv—K—O4 | 155.53 (3) | O2—C2—H2 | 110.1 |
O13i—K—O11v | 151.02 (3) | C1—C2—H2 | 110.1 |
O11ii—K—O11v | 140.38 (4) | C3—C2—H2 | 110.1 |
O12iii—K—O11v | 82.34 (3) | O3—C3—C4 | 111.78 (10) |
O4iv—K—O11v | 93.30 (3) | O3—C3—C2 | 108.63 (10) |
O4—K—O11v | 99.10 (3) | C4—C3—C2 | 112.36 (11) |
O13i—K—O1v | 138.55 (3) | O3—C3—H3 | 108.0 |
O11ii—K—O1v | 78.76 (3) | C4—C3—H3 | 108.0 |
O12iii—K—O1v | 144.12 (3) | C2—C3—H3 | 108.0 |
O4iv—K—O1v | 100.61 (3) | O4—C4—C5 | 107.64 (10) |
O4—K—O1v | 103.82 (3) | O4—C4—C3 | 110.62 (11) |
O11v—K—O1v | 62.31 (3) | C5—C4—C3 | 116.45 (11) |
O13i—K—O13v | 154.51 (2) | O4—C4—H4 | 107.2 |
O11ii—K—O13v | 105.44 (3) | C5—C4—H4 | 107.2 |
O12iii—K—O13v | 104.88 (3) | C3—C4—H4 | 107.2 |
O4iv—K—O13v | 138.67 (3) | O5—C5—C4 | 114.67 (11) |
O4—K—O13v | 60.45 (3) | O5—C5—H5A | 108.6 |
O11v—K—O13v | 46.81 (3) | C4—C5—H5A | 108.6 |
O1v—K—O13v | 55.64 (3) | O5—C5—H5B | 108.6 |
O13i—K—O12ii | 109.70 (3) | C4—C5—H5B | 108.6 |
O11ii—K—O12ii | 45.08 (3) | H5A—C5—H5B | 107.6 |
O12iii—K—O12ii | 152.63 (2) | C1—O1—Kvi | 114.91 (7) |
O4iv—K—O12ii | 132.73 (3) | C1—O1—H1O | 112.8 (16) |
O4—K—O12ii | 65.93 (3) | Kvi—O1—H1O | 78.7 (17) |
O11v—K—O12ii | 99.24 (3) | C2—O2—H2O | 106.9 (18) |
O1v—K—O12ii | 49.47 (3) | C3—O3—H3O | 109.5 (17) |
O13v—K—O12ii | 60.68 (2) | C4—O4—Kvii | 129.46 (8) |
O13i—K—Sv | 174.03 (2) | C4—O4—K | 108.72 (8) |
O11ii—K—Sv | 118.68 (2) | Kvii—O4—K | 105.89 (3) |
O12iii—K—Sv | 101.37 (2) | C4—O4—H4O | 105.4 (17) |
O4iv—K—Sv | 113.59 (2) | Kvii—O4—H4O | 86.0 (19) |
O4—K—Sv | 84.56 (2) | K—O4—H4O | 121.3 (18) |
O11v—K—Sv | 24.72 (2) | C5—O5—H5O | 104.9 (12) |
O1v—K—Sv | 47.283 (18) | O11—S—O13 | 112.59 (6) |
O13v—K—Sv | 25.091 (18) | O11—S—O12 | 112.64 (6) |
O12ii—K—Sv | 75.077 (17) | O13—S—O12 | 112.57 (6) |
O13i—K—Sii | 86.48 (2) | O11—S—C1 | 107.71 (6) |
O11ii—K—Sii | 21.47 (2) | O13—S—C1 | 103.57 (6) |
O12iii—K—Sii | 148.83 (2) | O12—S—C1 | 107.07 (6) |
O4iv—K—Sii | 118.82 (2) | O11—S—Kvi | 56.81 (4) |
O4—K—Sii | 71.50 (2) | O13—S—Kvi | 66.83 (4) |
O11v—K—Sii | 122.16 (2) | O12—S—Kvi | 164.56 (4) |
O1v—K—Sii | 65.17 (2) | C1—S—Kvi | 87.68 (4) |
O13v—K—Sii | 83.965 (19) | O11—S—Kviii | 44.54 (4) |
O12ii—K—Sii | 23.797 (17) | O13—S—Kviii | 125.40 (4) |
Sv—K—Sii | 98.572 (10) | O12—S—Kviii | 68.76 (4) |
O13i—K—Kiv | 42.00 (2) | C1—S—Kviii | 129.12 (4) |
O11ii—K—Kiv | 104.16 (2) | Kvi—S—Kviii | 98.572 (10) |
O12iii—K—Kiv | 46.97 (2) | S—O11—Kviii | 113.98 (5) |
O4iv—K—Kiv | 37.27 (2) | S—O11—Kvi | 98.48 (5) |
O4—K—Kiv | 118.27 (2) | Kviii—O11—Kvi | 140.38 (4) |
O11v—K—Kiv | 109.44 (2) | S—O12—Kix | 130.30 (6) |
O1v—K—Kiv | 137.88 (2) | S—O12—Kviii | 87.44 (5) |
O13v—K—Kiv | 149.78 (2) | Kix—O12—Kviii | 95.05 (3) |
O12ii—K—Kiv | 149.228 (19) | S—O13—Kx | 157.30 (6) |
Sv—K—Kiv | 134.152 (11) | S—O13—Kvi | 88.08 (5) |
Sii—K—Kiv | 125.527 (10) | Kx—O13—Kvi | 102.63 (3) |
O1—C1—C2—O2 | 42.80 (13) | Sv—K—O4—Kvii | −43.60 (2) |
S—C1—C2—O2 | −77.80 (11) | Sii—K—O4—Kvii | 57.34 (2) |
O1—C1—C2—C3 | −74.71 (12) | Kiv—K—O4—Kvii | 178.39 (2) |
S—C1—C2—C3 | 164.69 (8) | O1—C1—S—O11 | −64.93 (10) |
O2—C2—C3—O3 | 171.93 (10) | C2—C1—S—O11 | 55.31 (10) |
C1—C2—C3—O3 | −68.35 (12) | O1—C1—S—O13 | 54.54 (10) |
O2—C2—C3—C4 | 47.73 (13) | C2—C1—S—O13 | 174.78 (9) |
C1—C2—C3—C4 | 167.44 (10) | O1—C1—S—O12 | 173.69 (9) |
O3—C3—C4—O4 | 60.64 (13) | C2—C1—S—O12 | −66.06 (10) |
C2—C3—C4—O4 | −176.92 (10) | O1—C1—S—Kvi | −10.95 (8) |
O3—C3—C4—C5 | −62.64 (15) | C2—C1—S—Kvi | 109.29 (9) |
C2—C3—C4—C5 | 59.80 (15) | O1—C1—S—Kviii | −110.12 (8) |
O4—C4—C5—O5 | −60.95 (15) | C2—C1—S—Kviii | 10.12 (11) |
C3—C4—C5—O5 | 63.86 (15) | O13—S—O11—Kviii | 118.13 (6) |
C2—C1—O1—Kvi | −110.24 (9) | O12—S—O11—Kviii | −10.48 (8) |
S—C1—O1—Kvi | 13.85 (10) | C1—S—O11—Kviii | −128.31 (6) |
C5—C4—O4—Kvii | 67.79 (13) | Kvi—S—O11—Kviii | 156.73 (7) |
C3—C4—O4—Kvii | −60.45 (13) | O13—S—O11—Kvi | −38.60 (6) |
C5—C4—O4—K | −63.02 (11) | O12—S—O11—Kvi | −167.21 (5) |
C3—C4—O4—K | 168.74 (7) | C1—S—O11—Kvi | 74.95 (6) |
O13i—K—O4—C4 | −75.17 (8) | Kviii—S—O11—Kvi | −156.73 (7) |
O11ii—K—O4—C4 | −141.09 (8) | O11—S—O12—Kix | 102.32 (8) |
O12iii—K—O4—C4 | −2.76 (8) | O13—S—O12—Kix | −26.30 (10) |
O4iv—K—O4—C4 | −40.59 (8) | C1—S—O12—Kix | −139.47 (7) |
O11v—K—O4—C4 | 78.94 (8) | Kvi—S—O12—Kix | 58.2 (2) |
O1v—K—O4—C4 | 142.50 (7) | Kviii—S—O12—Kix | 94.45 (7) |
O13v—K—O4—C4 | 106.36 (8) | O11—S—O12—Kviii | 7.87 (6) |
O12ii—K—O4—C4 | 175.06 (8) | O13—S—O12—Kviii | −120.76 (5) |
Sv—K—O4—C4 | 98.99 (7) | C1—S—O12—Kviii | 126.08 (5) |
Sii—K—O4—C4 | −160.07 (8) | Kvi—S—O12—Kviii | −36.23 (17) |
Kiv—K—O4—C4 | −39.02 (8) | O11—S—O13—Kx | 153.72 (15) |
O13i—K—O4—Kvii | 142.24 (3) | O12—S—O13—Kx | −77.63 (17) |
O11ii—K—O4—Kvii | 76.33 (3) | C1—S—O13—Kx | 37.66 (17) |
O12iii—K—O4—Kvii | −145.35 (3) | Kvi—S—O13—Kx | 119.12 (16) |
O4iv—K—O4—Kvii | 176.82 (4) | Kviii—S—O13—Kx | −156.92 (13) |
O11v—K—O4—Kvii | −63.64 (3) | O11—S—O13—Kvi | 34.60 (6) |
O1v—K—O4—Kvii | −0.08 (3) | O12—S—O13—Kvi | 163.25 (5) |
O13v—K—O4—Kvii | −36.23 (3) | C1—S—O13—Kvi | −81.46 (5) |
O12ii—K—O4—Kvii | 32.47 (3) | Kviii—S—O13—Kvi | 83.96 (4) |
Symmetry codes: (i) −x, y+1/2, −z+1; (ii) x−1, y, z−1; (iii) −x+1, y+1/2, −z+1; (iv) −x, y+1/2, −z; (v) x, y, z−1; (vi) x, y, z+1; (vii) −x, y−1/2, −z; (viii) x+1, y, z+1; (ix) −x+1, y−1/2, −z+1; (x) −x, y−1/2, −z+1. |
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1O···O12xi | 0.83 (3) | 1.89 (3) | 2.6980 (14) | 165 (2) |
O2—H2O···O5iii | 0.77 (2) | 2.34 (3) | 2.9111 (14) | 132 (2) |
O3—H3O···O2x | 0.79 (2) | 2.10 (2) | 2.8596 (14) | 162 (2) |
O4—H4O···O5xi | 0.83 (3) | 1.95 (3) | 2.7779 (14) | 175 (3) |
O5—H5O···O13v | 0.88 (2) | 1.99 (2) | 2.8432 (14) | 161.7 (18) |
Symmetry codes: (iii) −x+1, y+1/2, −z+1; (v) x, y, z−1; (x) −x, y−1/2, −z+1; (xi) x−1, y, z. |
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1O···O12i | 0.83 (3) | 1.89 (3) | 2.6980 (14) | 165 (2) |
O2—H2O···O5ii | 0.77 (2) | 2.34 (3) | 2.9111 (14) | 132 (2) |
O3—H3O···O2iii | 0.79 (2) | 2.10 (2) | 2.8596 (14) | 162 (2) |
O4—H4O···O5i | 0.83 (3) | 1.95 (3) | 2.7779 (14) | 175 (3) |
O5—H5O···O13iv | 0.88 (2) | 1.99 (2) | 2.8432 (14) | 161.7 (18) |
Symmetry codes: (i) x−1, y, z; (ii) −x+1, y+1/2, −z+1; (iii) −x, y−1/2, −z+1; (iv) x, y, z−1. |
Experimental details
Crystal data | |
Chemical formula | K+·C5H11O8S− |
Mr | 270.30 |
Crystal system, space group | Monoclinic, P21 |
Temperature (K) | 140 |
a, b, c (Å) | 5.36167 (8), 9.01474 (14), 9.78623 (17) |
β (°) | 102.8138 (16) |
V (Å3) | 461.23 (1) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.83 |
Crystal size (mm) | 0.22 × 0.22 × 0.12 |
Data collection | |
Diffractometer | Oxford Diffraction Xcalibur 3/Sapphire3 CCD diffractometer |
Absorption correction | Multi-scan (CrysAlis PRO; Oxford Diffraction, 2011) |
Tmin, Tmax | 0.874, 1.00 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 8864, 2690, 2632 |
Rint | 0.023 |
(sin θ/λ)max (Å−1) | 0.703 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.021, 0.053, 1.05 |
No. of reflections | 2690 |
No. of parameters | 156 |
No. of restraints | 1 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.43, −0.22 |
Absolute structure | Flack (1983), 1264 Friedel pairs |
Absolute structure parameter | −0.01 (3) |
Computer programs: CrysAlis PRO (Oxford Diffraction, 2011), SHELXS97 (Sheldrick, 2008), ORTEPII (Johnson, 1976) and ORTEP-3 for Windows (Farrugia, 2012), SHELXL97 (Sheldrick, 2008) and WinGX (Farrugia, 2012).
Acknowledgements
We thank the EPSRC National
Service Facility (NMSF), Swansea, for determination of the low- and high-resolution spectra.References
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