metal-organic compounds
κ3O,N,O′}zinc terephthalate
of bis{2-[bis(2-hydroxyethyl)amino]ethanol-aDepartment of Ophthalmology, The Second Hospital of Jilin University, 218 Ziqiang Street, Changchun 130041, People's Republic of China, bDepartment of Orthopedics, The China–Japan Union Hospital of Jilin University Changchun, Changchun 130033, People's Republic of China, cDepartment of Vascular Surgery, The China–Japan Union Hospital of Jilin University, Changchun 130033, People's Republic of China, and dSt Erik's Eye Hospital, Karolinska Institutet, Polhemsgatan 50, SE-112 82 Stockholm, Sweden
*Correspondence e-mail: drsundj@163.com
In the title salt, [Zn(C6H15NO3)2](C8H4O4), the ZnII cation, located on a centre of inversion, is coordinated by four O atoms and two N atoms from two tridentate 2-[bis(2-hydroxyethyl)amino]ethanol (BHEA) ligands, giving rise to a slightly distorted octahedral geometry. The terephthalate dianion, located about a centre of inversion, is not coordinated to ZnII but is connected through O—H⋯O contacts with [Zn(BHEA)2]2+ cations, leading to a three-dimensional crystal structure.
Keywords: crystal structure; chelate; hydrogen bonding; terephthalate.
CCDC reference: 1027329
2. Experimental
2.1. Crystal data
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2.3. Refinement
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Data collection: APEX2 (Bruker, 2002); cell SAINT (Bruker, 2002); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL and publCIF (Westrip, 2010).
Supporting information
CCDC reference: 1027329
10.1107/S1600536814021771/tk5343sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536814021771/tk5343Isup2.hkl
The synthesis was performed under hydrothermal conditions. A mixture of Zn(CH3COO)2.2(H2O), (0.2 mmol, 0.044 g), 2-[bis(2-hydroxyethyl)amino]ethanol (0.4 mmol, 0.062 g), sodium terephthalate (0.2 mmol, 0.042 g) and H2O (20 mL) in a 30 mL stainless steel reactor with a Teflon liner was heated from 293 to 433 K in 2 h and then held at a constant temperature of 433 K for 72 h, after which the mixture was cooled to 298 K. Colourless crystals of the title compound were recovered from the reaction.
All C-bound H atoms were positioned with idealized geometry (0.93–0.97 Å) and refined isotropically with Uiso(H) = 1.2 Ueq(C) using a riding model. The hydroxy H-atoms were located in a different Fourier map and were refined with an O—H distance restrained to 0.85 (2) Å and with Uiso(H) = 1.5 Ueq(O).
Data collection: APEX2 (Bruker, 2002); cell
SAINT (Bruker, 2002); data reduction: SAINT (Bruker, 2002); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008) and publCIF (Westrip, 2010).A view of the ions in the title salt. Displacement ellipsoids are drawn at the 30% probability level. Unlabelled atoms in the cation are related by 1-x, -y, -z, and those in the dianion by 1-x, -1-y, 1-z. A view of the of the title salt. Hydrogen bonds are shown as dashed lines. |
[Zn(C6H15NO3)2](C8H4O4) | Z = 1 |
Mr = 527.86 | F(000) = 278 |
Triclinic, P1 | Dx = 1.567 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71069 Å |
a = 7.963 (5) Å | Cell parameters from 2165 reflections |
b = 8.823 (5) Å | θ = 1.7–22.8° |
c = 9.198 (5) Å | µ = 1.16 mm−1 |
α = 89.315 (5)° | T = 293 K |
β = 72.421 (5)° | Block, colourless |
γ = 66.208 (5)° | 0.26 × 0.24 × 0.23 mm |
V = 559.2 (6) Å3 |
Bruker SMART APEXII CCD diffractometer | 2189 independent reflections |
Radiation source: fine-focus sealed tube | 2165 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.012 |
ϕ and ω scans | θmax = 26.2°, θmin = 2.3° |
Absorption correction: multi-scan (SADABS; Bruker, 2002) | h = −9→8 |
Tmin = 0.725, Tmax = 0.803 | k = −10→10 |
3145 measured reflections | l = −10→11 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.027 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.072 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.10 | w = 1/[σ2(Fo2) + (0.0381P)2 + 0.3177P] where P = (Fo2 + 2Fc2)/3 |
2189 reflections | (Δ/σ)max < 0.001 |
160 parameters | Δρmax = 0.45 e Å−3 |
3 restraints | Δρmin = −0.51 e Å−3 |
[Zn(C6H15NO3)2](C8H4O4) | γ = 66.208 (5)° |
Mr = 527.86 | V = 559.2 (6) Å3 |
Triclinic, P1 | Z = 1 |
a = 7.963 (5) Å | Mo Kα radiation |
b = 8.823 (5) Å | µ = 1.16 mm−1 |
c = 9.198 (5) Å | T = 293 K |
α = 89.315 (5)° | 0.26 × 0.24 × 0.23 mm |
β = 72.421 (5)° |
Bruker SMART APEXII CCD diffractometer | 2189 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2002) | 2165 reflections with I > 2σ(I) |
Tmin = 0.725, Tmax = 0.803 | Rint = 0.012 |
3145 measured reflections |
R[F2 > 2σ(F2)] = 0.027 | 3 restraints |
wR(F2) = 0.072 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.10 | Δρmax = 0.45 e Å−3 |
2189 reflections | Δρmin = −0.51 e Å−3 |
160 parameters |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
C1 | 0.6774 (3) | −0.3639 (2) | −0.0601 (2) | 0.0370 (5) | |
H1A | 0.7747 | −0.4664 | −0.1248 | 0.044* | |
H1B | 0.5597 | −0.3796 | −0.0138 | 0.044* | |
C2 | 0.7484 (3) | −0.3279 (2) | 0.0655 (2) | 0.0331 (4) | |
H2A | 0.7475 | −0.4087 | 0.1378 | 0.040* | |
H2B | 0.8814 | −0.3417 | 0.0199 | 0.040* | |
C3 | 0.3010 (3) | −0.1603 (3) | 0.2345 (2) | 0.0363 (5) | |
H3A | 0.3374 | −0.2759 | 0.1998 | 0.044* | |
H3B | 0.1832 | −0.1228 | 0.3224 | 0.044* | |
C4 | 0.4611 (3) | −0.1470 (3) | 0.2818 (2) | 0.0325 (4) | |
H4A | 0.4091 | −0.0417 | 0.3462 | 0.039* | |
H4B | 0.5057 | −0.2361 | 0.3426 | 0.039* | |
C5 | 0.7460 (3) | −0.0863 (3) | 0.2013 (3) | 0.0371 (5) | |
H5A | 0.6741 | 0.0341 | 0.2208 | 0.044* | |
H5B | 0.8648 | −0.1107 | 0.1168 | 0.044* | |
C6 | 0.8006 (4) | −0.1462 (3) | 0.3430 (3) | 0.0463 (5) | |
H6A | 0.8579 | −0.0793 | 0.3745 | 0.056* | |
H6B | 0.6851 | −0.1329 | 0.4268 | 0.056* | |
C7 | 0.9062 (2) | −0.7092 (2) | 0.3337 (2) | 0.0260 (4) | |
C8 | 0.6957 (2) | −0.5992 (2) | 0.4202 (2) | 0.0228 (3) | |
C9 | 0.5509 (3) | −0.6072 (2) | 0.3698 (2) | 0.0253 (4) | |
H9 | 0.5846 | −0.6789 | 0.2823 | 0.030* | |
C10 | 0.6436 (3) | −0.4910 (2) | 0.5508 (2) | 0.0250 (4) | |
H10 | 0.7392 | −0.4844 | 0.5852 | 0.030* | |
N1 | 0.6286 (2) | −0.15730 (18) | 0.14967 (17) | 0.0229 (3) | |
O1 | 0.63918 (19) | −0.23022 (16) | −0.15252 (15) | 0.0273 (3) | |
O2 | 0.26592 (18) | −0.06108 (17) | 0.11409 (15) | 0.0283 (3) | |
O3 | 0.9319 (3) | −0.3128 (2) | 0.3114 (2) | 0.0553 (5) | |
O4 | 0.9393 (2) | −0.8061 (2) | 0.21957 (18) | 0.0411 (4) | |
O5 | 1.03466 (19) | −0.69733 (19) | 0.37935 (16) | 0.0357 (3) | |
Zn1 | 0.5000 | 0.0000 | 0.0000 | 0.01988 (10) | |
H1 | 0.738 (3) | −0.249 (3) | −0.224 (2) | 0.030* | |
H2 | 0.160 (3) | 0.020 (2) | 0.150 (3) | 0.030* | |
H3 | 0.954 (3) | −0.343 (3) | 0.397 (2) | 0.030* |
U11 | U22 | U33 | U12 | U13 | U23 | |
C1 | 0.0491 (12) | 0.0214 (9) | 0.0346 (10) | −0.0125 (9) | −0.0086 (9) | −0.0021 (8) |
C2 | 0.0334 (10) | 0.0202 (9) | 0.0327 (10) | −0.0003 (7) | −0.0084 (8) | 0.0034 (7) |
C3 | 0.0277 (9) | 0.0398 (11) | 0.0383 (11) | −0.0150 (9) | −0.0056 (8) | 0.0149 (9) |
C4 | 0.0298 (9) | 0.0384 (10) | 0.0218 (9) | −0.0095 (8) | −0.0049 (7) | 0.0076 (8) |
C5 | 0.0427 (11) | 0.0357 (11) | 0.0466 (12) | −0.0202 (9) | −0.0284 (10) | 0.0128 (9) |
C6 | 0.0430 (12) | 0.0505 (14) | 0.0519 (14) | −0.0171 (11) | −0.0281 (11) | 0.0066 (11) |
C7 | 0.0202 (8) | 0.0259 (9) | 0.0237 (8) | −0.0041 (7) | −0.0038 (7) | 0.0040 (7) |
C8 | 0.0184 (8) | 0.0208 (8) | 0.0238 (8) | −0.0053 (6) | −0.0038 (6) | 0.0041 (6) |
C9 | 0.0231 (8) | 0.0249 (9) | 0.0233 (8) | −0.0071 (7) | −0.0055 (7) | −0.0011 (6) |
C10 | 0.0205 (8) | 0.0271 (9) | 0.0263 (9) | −0.0084 (7) | −0.0082 (7) | 0.0027 (7) |
N1 | 0.0215 (7) | 0.0215 (7) | 0.0236 (7) | −0.0066 (6) | −0.0078 (6) | 0.0031 (6) |
O1 | 0.0249 (6) | 0.0268 (6) | 0.0237 (6) | −0.0075 (5) | −0.0038 (5) | −0.0028 (5) |
O2 | 0.0189 (6) | 0.0293 (7) | 0.0303 (7) | −0.0059 (5) | −0.0050 (5) | 0.0047 (5) |
O3 | 0.0529 (10) | 0.0576 (11) | 0.0483 (10) | −0.0096 (9) | −0.0261 (9) | 0.0130 (8) |
O4 | 0.0226 (7) | 0.0423 (8) | 0.0432 (8) | −0.0025 (6) | −0.0049 (6) | −0.0157 (7) |
O5 | 0.0188 (6) | 0.0481 (9) | 0.0311 (7) | −0.0068 (6) | −0.0056 (5) | −0.0038 (6) |
Zn1 | 0.01853 (15) | 0.01801 (15) | 0.01999 (15) | −0.00478 (11) | −0.00604 (10) | 0.00264 (10) |
C1—O1 | 1.431 (2) | C6—H6B | 0.9700 |
C1—C2 | 1.518 (3) | C7—O4 | 1.255 (2) |
C1—H1A | 0.9700 | C7—O5 | 1.257 (2) |
C1—H1B | 0.9700 | C7—C8 | 1.511 (2) |
C2—N1 | 1.483 (2) | C8—C10 | 1.390 (3) |
C2—H2A | 0.9700 | C8—C9 | 1.393 (3) |
C2—H2B | 0.9700 | C9—C10i | 1.390 (3) |
C3—O2 | 1.427 (2) | C9—H9 | 0.9300 |
C3—C4 | 1.511 (3) | C10—C9i | 1.390 (3) |
C3—H3A | 0.9700 | C10—H10 | 0.9300 |
C3—H3B | 0.9700 | N1—Zn1 | 2.1282 (16) |
C4—N1 | 1.480 (2) | O1—Zn1 | 2.1529 (16) |
C4—H4A | 0.9700 | O1—H1 | 0.815 (16) |
C4—H4B | 0.9700 | O2—Zn1 | 2.1169 (16) |
C5—N1 | 1.496 (2) | O2—H2 | 0.825 (16) |
C5—C6 | 1.519 (3) | O3—H3 | 0.870 (16) |
C5—H5A | 0.9700 | Zn1—O2ii | 2.1169 (16) |
C5—H5B | 0.9700 | Zn1—N1ii | 2.1282 (16) |
C6—O3 | 1.388 (3) | Zn1—O1ii | 2.1529 (16) |
C6—H6A | 0.9700 | ||
O1—C1—C2 | 111.27 (16) | O5—C7—C8 | 118.64 (16) |
O1—C1—H1A | 109.4 | C10—C8—C9 | 119.17 (16) |
C2—C1—H1A | 109.4 | C10—C8—C7 | 121.09 (16) |
O1—C1—H1B | 109.4 | C9—C8—C7 | 119.74 (16) |
C2—C1—H1B | 109.4 | C10i—C9—C8 | 120.58 (17) |
H1A—C1—H1B | 108.0 | C10i—C9—H9 | 119.7 |
N1—C2—C1 | 112.93 (16) | C8—C9—H9 | 119.7 |
N1—C2—H2A | 109.0 | C9i—C10—C8 | 120.26 (17) |
C1—C2—H2A | 109.0 | C9i—C10—H10 | 119.9 |
N1—C2—H2B | 109.0 | C8—C10—H10 | 119.9 |
C1—C2—H2B | 109.0 | C4—N1—C2 | 113.25 (15) |
H2A—C2—H2B | 107.8 | C4—N1—C5 | 109.91 (16) |
O2—C3—C4 | 110.59 (16) | C2—N1—C5 | 112.28 (16) |
O2—C3—H3A | 109.5 | C4—N1—Zn1 | 104.11 (11) |
C4—C3—H3A | 109.5 | C2—N1—Zn1 | 108.27 (12) |
O2—C3—H3B | 109.5 | C5—N1—Zn1 | 108.59 (12) |
C4—C3—H3B | 109.5 | C1—O1—Zn1 | 107.34 (11) |
H3A—C3—H3B | 108.1 | C1—O1—H1 | 108.2 (17) |
N1—C4—C3 | 113.26 (16) | Zn1—O1—H1 | 120.1 (16) |
N1—C4—H4A | 108.9 | C3—O2—Zn1 | 112.52 (11) |
C3—C4—H4A | 108.9 | C3—O2—H2 | 108.0 (16) |
N1—C4—H4B | 108.9 | Zn1—O2—H2 | 114.6 (16) |
C3—C4—H4B | 108.9 | C6—O3—H3 | 106.6 (15) |
H4A—C4—H4B | 107.7 | O2ii—Zn1—O2 | 180.00 (4) |
N1—C5—C6 | 117.31 (18) | O2ii—Zn1—N1ii | 81.99 (7) |
N1—C5—H5A | 108.0 | O2—Zn1—N1ii | 98.01 (7) |
C6—C5—H5A | 108.0 | O2ii—Zn1—N1 | 98.01 (7) |
N1—C5—H5B | 108.0 | O2—Zn1—N1 | 81.99 (7) |
C6—C5—H5B | 108.0 | N1ii—Zn1—N1 | 180.0 |
H5A—C5—H5B | 107.2 | O2ii—Zn1—O1ii | 90.41 (6) |
O3—C6—C5 | 110.1 (2) | O2—Zn1—O1ii | 89.59 (6) |
O3—C6—H6A | 109.6 | N1ii—Zn1—O1ii | 82.73 (7) |
C5—C6—H6A | 109.6 | N1—Zn1—O1ii | 97.27 (7) |
O3—C6—H6B | 109.6 | O2ii—Zn1—O1 | 89.59 (6) |
C5—C6—H6B | 109.6 | O2—Zn1—O1 | 90.41 (6) |
H6A—C6—H6B | 108.2 | N1ii—Zn1—O1 | 97.27 (7) |
O4—C7—O5 | 124.72 (16) | N1—Zn1—O1 | 82.73 (7) |
O4—C7—C8 | 116.64 (16) | O1ii—Zn1—O1 | 180.00 (12) |
O1—C1—C2—N1 | 47.2 (2) | C3—O2—Zn1—N1 | 4.13 (13) |
O2—C3—C4—N1 | −43.7 (2) | C3—O2—Zn1—O1ii | −93.26 (13) |
N1—C5—C6—O3 | 68.3 (3) | C3—O2—Zn1—O1 | 86.74 (13) |
O4—C7—C8—C10 | 178.15 (17) | C4—N1—Zn1—O2ii | 154.45 (12) |
O5—C7—C8—C10 | −2.2 (3) | C2—N1—Zn1—O2ii | −84.78 (12) |
O4—C7—C8—C9 | −1.1 (3) | C5—N1—Zn1—O2ii | 37.38 (13) |
O5—C7—C8—C9 | 178.52 (17) | C4—N1—Zn1—O2 | −25.55 (12) |
C10—C8—C9—C10i | −0.3 (3) | C2—N1—Zn1—O2 | 95.22 (12) |
C7—C8—C9—C10i | 179.03 (16) | C5—N1—Zn1—O2 | −142.62 (13) |
C9—C8—C10—C9i | 0.3 (3) | C4—N1—Zn1—N1ii | −80 (100) |
C7—C8—C10—C9i | −179.02 (16) | C2—N1—Zn1—N1ii | 41 (100) |
C3—C4—N1—C2 | −72.9 (2) | C5—N1—Zn1—N1ii | 163 (100) |
C3—C4—N1—C5 | 160.62 (17) | C4—N1—Zn1—O1ii | 63.01 (12) |
C3—C4—N1—Zn1 | 44.47 (18) | C2—N1—Zn1—O1ii | −176.22 (12) |
C1—C2—N1—C4 | 87.9 (2) | C5—N1—Zn1—O1ii | −54.06 (13) |
C1—C2—N1—C5 | −146.89 (18) | C4—N1—Zn1—O1 | −116.99 (12) |
C1—C2—N1—Zn1 | −27.01 (19) | C2—N1—Zn1—O1 | 3.78 (12) |
C6—C5—N1—C4 | 48.9 (2) | C5—N1—Zn1—O1 | 125.94 (13) |
C6—C5—N1—C2 | −78.1 (2) | C1—O1—Zn1—O2ii | 118.61 (13) |
C6—C5—N1—Zn1 | 162.17 (16) | C1—O1—Zn1—O2 | −61.39 (13) |
C2—C1—O1—Zn1 | −40.83 (19) | C1—O1—Zn1—N1ii | −159.52 (12) |
C4—C3—O2—Zn1 | 18.7 (2) | C1—O1—Zn1—N1 | 20.48 (12) |
C3—O2—Zn1—O2ii | 116 (100) | C1—O1—Zn1—O1ii | −79 (100) |
C3—O2—Zn1—N1ii | −175.87 (13) |
Symmetry codes: (i) −x+1, −y−1, −z+1; (ii) −x+1, −y, −z. |
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1···O5iii | 0.82 (2) | 1.82 (2) | 2.632 (2) | 177 (2) |
O2—H2···O4iv | 0.83 (2) | 1.74 (2) | 2.564 (2) | 178 (2) |
O3—H3···O5v | 0.87 (2) | 2.13 (2) | 2.942 (3) | 155 (2) |
Symmetry codes: (iii) −x+2, −y−1, −z; (iv) x−1, y+1, z; (v) −x+2, −y−1, −z+1. |
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1···O5i | 0.815 (16) | 1.818 (17) | 2.632 (2) | 177 (2) |
O2—H2···O4ii | 0.825 (16) | 1.740 (16) | 2.564 (2) | 178 (2) |
O3—H3···O5iii | 0.870 (16) | 2.129 (18) | 2.942 (3) | 155 (2) |
Symmetry codes: (i) −x+2, −y−1, −z; (ii) x−1, y+1, z; (iii) −x+2, −y−1, −z+1. |
Acknowledgements
The project is supported by the International Scientific and Technological Cooperation Foundation of Jilin Province (20120722).
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