organic compounds
of benzyl 3-(3-methylphenyl)dithiocarbazate
aDepartment of Chemistry, Universiti Putra Malaysia, 43400 Serdang, Malaysia, and bDepartment of Chemistry, University of Malaya, 50603 Kuala Lumpur, Malaysia
*Correspondence e-mail: thahira@upm.edu.my
In the title compound, C15H16N2S2, the central CN2S2 residue is almost planar (r.m.s. deviation = 0.0354 Å) and forms dihedral angles of 56.02 (4) and 75.52 (4)° with the phenyl and tolyl rings, respectively; the dihedral angle between the aromatic rings is 81.72 (5)°. The conformation about the N—N bond is gauche [C—N—N—C = −117.48 (15)°]. Overall, the molecule has the shape of the letter L. In the crystal packing, supramolecular chains along the a axis are formed by N—H⋯S(thione) hydrogen bonds whereby the thione S atom accepts two such bonds. The hydrogen bonding leads to alternating edge-shared eight-membered {⋯HNCS}2 and 10-membered {⋯HNNH⋯S}2 synthons. The chains are connected into layers by phenyl–tolyl C—H⋯π interactions; the layers stack along the c axis with no specific interactions between them.
Keywords: crystal structure; hydrogen bonding; C—H⋯π interactions; S-substituted dithiocarbazate.
CCDC reference: 1052727
1. Related literature
For background on the coordination chemistry of dithiocarbazate derivatives, see: Ravoof et al. (2010). For the structure of the 2-tolyl analogue, which is superimposable upon the title compound with the exception of the tolyl rings, see: Tayamon et al. (2012). For the synthesis, see: Tarafder et al. (2002).
2. Experimental
2.1. Crystal data
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2.3. Refinement
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Data collection: CrysAlis PRO (Agilent, 2011); cell CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2015); program(s) used to refine structure: SHELXL2014 (Sheldrick, 2015); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012), QMOL (Gans & Shalloway, 2001) and DIAMOND (Brandenburg, 2006); software used to prepare material for publication: publCIF (Westrip, 2010).
Supporting information
CCDC reference: 1052727
10.1107/S2056989015004764/hb7378sup1.cif
contains datablocks 1, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S2056989015004764/hb7378Isup2.hkl
Supporting information file. DOI: 10.1107/S2056989015004764/hb7378Isup3.cml
The compound was prepared according to Tarafder et al. (2002). m-Tolylhydrazine hydrochloride (0.05 mol) was added to a solution of potassium hydroxide (0.05 mol) in 95% ethanol (70 ml) with continual stirring. This mixture was cooled in an ice-bath until the temperature was about 268 K when the mixture was filtered to remove excess potassium chloride. Carbon disulfide (0.05 mol) was added drop-wise to the filtrate with vigorous stirring for about 1 h. The mixture was kept in the ice-salt bath while benzyl chloride (0.05 mol) was added drop-wise with vigorous stirring. Stirring was continued for 1 h after the complete addition of benzyl chloride. A pale-pink precipitate that was obtained was filtered and washed with cold ethanol. The product was dried in a desiccator and the filtrate was kept in freezer overnight. Pale-brown crystals were obtained from its filtrate. Yield 53.1%. M.pt: 416 K. Anal. Found (Calc.): C, 61.26 (62.46); H, 5.42 (5.59); N, 9.02 (9.71)%.
Carbon-bound H-atoms were placed in calculated positions (C—H = 0.95 to 0.99 Å) and were included in the
in the riding model approximation with Uiso(H) = 1.2–1.5Ueq(C). The N—H H atoms were refined with N—H = 0.88±0.01 Å, and with Uiso(H) = 1.2Ueq(N). Owing to poor agreement, the (0 0 2) reflection was omitted from the final cycles of refinement.For background on the coordination chemistry of dithiocarbazate derivatives, see: Ravoof et al. (2010). For the structure of the 2-tolyl analogue, which is superimposable upon the title compound with the exception of the tolyl rings, see: Tayamon et al. (2012). For the synthesis, see: Tarafder et al. (2002).
Data collection: CrysAlis PRO (Agilent, 2011); cell
CrysAlis PRO (Agilent, 2011); data reduction: CrysAlis PRO (Agilent, 2011); program(s) used to solve structure: SHELXS97 (Sheldrick, 2015); program(s) used to refine structure: SHELXL2014 (Sheldrick, 2015); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012), QMOL (Gans & Shalloway, 2001) and DIAMOND (Brandenburg, 2006); software used to prepare material for publication: publCIF (Westrip, 2010).Fig. 1. The molecular structure of the title compound showing displacement ellipsoids at the 70% probability level. | |
Fig. 2. Superimposition of the title compound, shown in red, and the 2-tolyl analogue (blue). The molecules have been superimposed such that the CS2 residues are overlapped. | |
Fig. 3. The supramolecular chain along the a axis sustained by N—H···S hydrogen bonding, shown as blue dashed lines. | |
Fig. 4. A view of the unit-cell contents in projection down the a axis. The N—H···S and C—H···π interactions are shown as blue and purple dashed lines, respectively. |
C15H16N2S2 | F(000) = 608 |
Mr = 288.42 | Dx = 1.337 Mg m−3 |
Monoclinic, P21/n | Cu Kα radiation, λ = 1.5418 Å |
a = 5.9396 (1) Å | Cell parameters from 9462 reflections |
b = 10.3243 (2) Å | θ = 4.7–71.5° |
c = 23.5474 (5) Å | µ = 3.25 mm−1 |
β = 96.952 (2)° | T = 100 K |
V = 1433.36 (5) Å3 | Prism, pale-brown |
Z = 4 | 0.20 × 0.09 × 0.06 mm |
Oxford Diffraction Xcaliber Eos Gemini diffractometer | 2784 independent reflections |
Radiation source: fine-focus sealed tube | 2616 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.022 |
Detector resolution: 16.1952 pixels mm-1 | θmax = 71.4°, θmin = 4.7° |
ω scans | h = −7→7 |
Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2011) | k = −12→12 |
Tmin = 0.700, Tmax = 1.000 | l = −28→28 |
18486 measured reflections |
Refinement on F2 | 2 restraints |
Least-squares matrix: full | Hydrogen site location: mixed |
R[F2 > 2σ(F2)] = 0.036 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.104 | w = 1/[σ2(Fo2) + (0.0719P)2 + 0.7171P] where P = (Fo2 + 2Fc2)/3 |
S = 1.01 | (Δ/σ)max = 0.015 |
2784 reflections | Δρmax = 0.43 e Å−3 |
179 parameters | Δρmin = −0.31 e Å−3 |
C15H16N2S2 | V = 1433.36 (5) Å3 |
Mr = 288.42 | Z = 4 |
Monoclinic, P21/n | Cu Kα radiation |
a = 5.9396 (1) Å | µ = 3.25 mm−1 |
b = 10.3243 (2) Å | T = 100 K |
c = 23.5474 (5) Å | 0.20 × 0.09 × 0.06 mm |
β = 96.952 (2)° |
Oxford Diffraction Xcaliber Eos Gemini diffractometer | 2784 independent reflections |
Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2011) | 2616 reflections with I > 2σ(I) |
Tmin = 0.700, Tmax = 1.000 | Rint = 0.022 |
18486 measured reflections |
R[F2 > 2σ(F2)] = 0.036 | 2 restraints |
wR(F2) = 0.104 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.01 | Δρmax = 0.43 e Å−3 |
2784 reflections | Δρmin = −0.31 e Å−3 |
179 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
x | y | z | Uiso*/Ueq | ||
S1 | −0.02626 (6) | 0.14613 (3) | 0.57928 (2) | 0.01811 (14) | |
S2 | −0.27407 (6) | 0.35220 (3) | 0.50311 (2) | 0.01879 (14) | |
N1 | 0.1325 (2) | 0.37365 (13) | 0.56063 (5) | 0.0185 (3) | |
H1N | 0.145 (3) | 0.4481 (12) | 0.5433 (8) | 0.022* | |
N2 | 0.3251 (2) | 0.32132 (13) | 0.59271 (6) | 0.0190 (3) | |
H2N | 0.440 (2) | 0.319 (2) | 0.5728 (7) | 0.023* | |
C1 | −0.0490 (3) | 0.29984 (14) | 0.54689 (6) | 0.0166 (3) | |
C2 | −0.2885 (3) | 0.06797 (15) | 0.54854 (7) | 0.0220 (3) | |
H2A | −0.4205 | 0.1231 | 0.5541 | 0.026* | |
H2B | −0.2867 | 0.0541 | 0.5070 | 0.026* | |
C3 | −0.3054 (3) | −0.06035 (15) | 0.57852 (6) | 0.0183 (3) | |
C4 | −0.4833 (3) | −0.08287 (17) | 0.61097 (7) | 0.0232 (3) | |
H4 | −0.5904 | −0.0163 | 0.6152 | 0.028* | |
C5 | −0.5047 (3) | −0.20200 (18) | 0.63711 (7) | 0.0277 (4) | |
H5 | −0.6282 | −0.2171 | 0.6584 | 0.033* | |
C6 | −0.3471 (3) | −0.29890 (17) | 0.63237 (7) | 0.0289 (4) | |
H6 | −0.3606 | −0.3799 | 0.6508 | 0.035* | |
C7 | −0.1689 (3) | −0.27671 (16) | 0.60040 (7) | 0.0283 (4) | |
H7 | −0.0606 | −0.3430 | 0.5968 | 0.034* | |
C8 | −0.1488 (3) | −0.15806 (16) | 0.57376 (7) | 0.0232 (4) | |
H8 | −0.0263 | −0.1437 | 0.5520 | 0.028* | |
C9 | 0.3914 (3) | 0.37731 (15) | 0.64746 (6) | 0.0182 (3) | |
C10 | 0.2516 (3) | 0.45821 (15) | 0.67466 (6) | 0.0194 (3) | |
H10 | 0.1050 | 0.4796 | 0.6563 | 0.023* | |
C11 | 0.3250 (3) | 0.50851 (16) | 0.72891 (7) | 0.0231 (3) | |
C12 | 0.5383 (3) | 0.47294 (18) | 0.75585 (7) | 0.0266 (4) | |
H12 | 0.5897 | 0.5053 | 0.7929 | 0.032* | |
C13 | 0.6756 (3) | 0.39062 (18) | 0.72868 (7) | 0.0270 (4) | |
H13 | 0.8197 | 0.3662 | 0.7476 | 0.032* | |
C14 | 0.6050 (3) | 0.34342 (16) | 0.67428 (7) | 0.0220 (3) | |
H14 | 0.7014 | 0.2886 | 0.6556 | 0.026* | |
C15 | 0.1791 (3) | 0.60228 (19) | 0.75688 (8) | 0.0304 (4) | |
H15A | 0.1134 | 0.5586 | 0.7879 | 0.046* | |
H15B | 0.0571 | 0.6339 | 0.7285 | 0.046* | |
H15C | 0.2718 | 0.6756 | 0.7724 | 0.046* |
U11 | U22 | U33 | U12 | U13 | U23 | |
S1 | 0.0189 (2) | 0.0149 (2) | 0.0195 (2) | −0.00064 (12) | −0.00198 (15) | 0.00260 (13) |
S2 | 0.0174 (2) | 0.0191 (2) | 0.0192 (2) | 0.00001 (13) | −0.00053 (15) | 0.00490 (13) |
N1 | 0.0193 (6) | 0.0165 (6) | 0.0189 (6) | −0.0008 (5) | −0.0012 (5) | 0.0036 (5) |
N2 | 0.0166 (6) | 0.0212 (7) | 0.0189 (6) | 0.0010 (5) | 0.0009 (5) | 0.0006 (5) |
C1 | 0.0204 (7) | 0.0157 (7) | 0.0141 (6) | 0.0019 (6) | 0.0037 (5) | −0.0002 (5) |
C2 | 0.0194 (7) | 0.0187 (8) | 0.0259 (8) | −0.0037 (6) | −0.0055 (6) | 0.0019 (6) |
C3 | 0.0202 (7) | 0.0177 (7) | 0.0160 (7) | −0.0026 (6) | −0.0020 (6) | −0.0007 (6) |
C4 | 0.0188 (7) | 0.0288 (9) | 0.0214 (7) | 0.0000 (6) | −0.0001 (6) | −0.0016 (7) |
C5 | 0.0227 (8) | 0.0404 (10) | 0.0197 (8) | −0.0116 (7) | 0.0013 (6) | 0.0046 (7) |
C6 | 0.0350 (9) | 0.0233 (9) | 0.0265 (8) | −0.0089 (7) | −0.0046 (7) | 0.0073 (7) |
C7 | 0.0344 (9) | 0.0183 (8) | 0.0316 (9) | 0.0033 (7) | 0.0019 (7) | 0.0023 (7) |
C8 | 0.0256 (8) | 0.0218 (8) | 0.0228 (8) | 0.0002 (6) | 0.0055 (6) | 0.0010 (6) |
C9 | 0.0191 (7) | 0.0178 (7) | 0.0174 (7) | −0.0044 (6) | 0.0009 (6) | 0.0038 (6) |
C10 | 0.0180 (7) | 0.0192 (7) | 0.0206 (7) | −0.0017 (6) | 0.0012 (6) | 0.0040 (6) |
C11 | 0.0266 (8) | 0.0224 (8) | 0.0211 (7) | −0.0035 (6) | 0.0063 (6) | 0.0019 (6) |
C12 | 0.0288 (8) | 0.0333 (9) | 0.0169 (7) | −0.0065 (7) | −0.0006 (6) | 0.0005 (7) |
C13 | 0.0217 (8) | 0.0344 (9) | 0.0233 (8) | −0.0016 (7) | −0.0036 (6) | 0.0057 (7) |
C14 | 0.0194 (8) | 0.0235 (8) | 0.0230 (8) | 0.0006 (6) | 0.0021 (6) | 0.0041 (6) |
C15 | 0.0353 (9) | 0.0319 (10) | 0.0248 (8) | −0.0013 (8) | 0.0070 (7) | −0.0059 (7) |
S1—C1 | 1.7588 (15) | C6—H6 | 0.9500 |
S1—C2 | 1.8245 (16) | C7—C8 | 1.388 (2) |
S2—C1 | 1.6761 (15) | C7—H7 | 0.9500 |
N1—C1 | 1.328 (2) | C8—H8 | 0.9500 |
N1—N2 | 1.4007 (18) | C9—C10 | 1.388 (2) |
N1—H1N | 0.878 (9) | C9—C14 | 1.392 (2) |
N2—C9 | 1.424 (2) | C10—C11 | 1.399 (2) |
N2—H2N | 0.875 (9) | C10—H10 | 0.9500 |
C2—C3 | 1.510 (2) | C11—C12 | 1.396 (2) |
C2—H2A | 0.9900 | C11—C15 | 1.503 (2) |
C2—H2B | 0.9900 | C12—C13 | 1.386 (3) |
C3—C8 | 1.386 (2) | C12—H12 | 0.9500 |
C3—C4 | 1.397 (2) | C13—C14 | 1.387 (2) |
C4—C5 | 1.388 (3) | C13—H13 | 0.9500 |
C4—H4 | 0.9500 | C14—H14 | 0.9500 |
C5—C6 | 1.384 (3) | C15—H15A | 0.9800 |
C5—H5 | 0.9500 | C15—H15B | 0.9800 |
C6—C7 | 1.390 (3) | C15—H15C | 0.9800 |
C1—S1—C2 | 102.12 (7) | C8—C7—H7 | 119.9 |
C1—N1—N2 | 119.73 (13) | C6—C7—H7 | 119.9 |
C1—N1—H1N | 120.1 (13) | C3—C8—C7 | 120.68 (15) |
N2—N1—H1N | 118.6 (13) | C3—C8—H8 | 119.7 |
N1—N2—C9 | 116.74 (13) | C7—C8—H8 | 119.7 |
N1—N2—H2N | 111.2 (13) | C10—C9—C14 | 120.35 (15) |
C9—N2—H2N | 110.3 (13) | C10—C9—N2 | 123.14 (14) |
N1—C1—S2 | 121.90 (11) | C14—C9—N2 | 116.47 (14) |
N1—C1—S1 | 113.26 (11) | C9—C10—C11 | 120.48 (14) |
S2—C1—S1 | 124.84 (9) | C9—C10—H10 | 119.8 |
C3—C2—S1 | 107.71 (10) | C11—C10—H10 | 119.8 |
C3—C2—H2A | 110.2 | C12—C11—C10 | 118.85 (15) |
S1—C2—H2A | 110.2 | C12—C11—C15 | 120.66 (15) |
C3—C2—H2B | 110.2 | C10—C11—C15 | 120.46 (15) |
S1—C2—H2B | 110.2 | C13—C12—C11 | 120.25 (15) |
H2A—C2—H2B | 108.5 | C13—C12—H12 | 119.9 |
C8—C3—C4 | 118.88 (15) | C11—C12—H12 | 119.9 |
C8—C3—C2 | 121.17 (14) | C12—C13—C14 | 120.85 (15) |
C4—C3—C2 | 119.94 (14) | C12—C13—H13 | 119.6 |
C5—C4—C3 | 120.39 (16) | C14—C13—H13 | 119.6 |
C5—C4—H4 | 119.8 | C13—C14—C9 | 119.18 (16) |
C3—C4—H4 | 119.8 | C13—C14—H14 | 120.4 |
C6—C5—C4 | 120.40 (15) | C9—C14—H14 | 120.4 |
C6—C5—H5 | 119.8 | C11—C15—H15A | 109.5 |
C4—C5—H5 | 119.8 | C11—C15—H15B | 109.5 |
C5—C6—C7 | 119.42 (15) | H15A—C15—H15B | 109.5 |
C5—C6—H6 | 120.3 | C11—C15—H15C | 109.5 |
C7—C6—H6 | 120.3 | H15A—C15—H15C | 109.5 |
C8—C7—C6 | 120.22 (16) | H15B—C15—H15C | 109.5 |
C1—N1—N2—C9 | −117.48 (15) | C2—C3—C8—C7 | −178.47 (15) |
N2—N1—C1—S2 | −173.66 (10) | C6—C7—C8—C3 | −0.1 (3) |
N2—N1—C1—S1 | 6.62 (17) | N1—N2—C9—C10 | 14.4 (2) |
C2—S1—C1—N1 | −176.50 (11) | N1—N2—C9—C14 | −167.76 (13) |
C2—S1—C1—S2 | 3.79 (12) | C14—C9—C10—C11 | 1.1 (2) |
C1—S1—C2—C3 | −173.00 (11) | N2—C9—C10—C11 | 178.89 (14) |
S1—C2—C3—C8 | −64.36 (17) | C9—C10—C11—C12 | −1.8 (2) |
S1—C2—C3—C4 | 116.71 (14) | C9—C10—C11—C15 | 176.39 (15) |
C8—C3—C4—C5 | −1.1 (2) | C10—C11—C12—C13 | 0.9 (2) |
C2—C3—C4—C5 | 177.82 (14) | C15—C11—C12—C13 | −177.29 (16) |
C3—C4—C5—C6 | 1.4 (2) | C11—C12—C13—C14 | 0.7 (3) |
C4—C5—C6—C7 | −1.0 (3) | C12—C13—C14—C9 | −1.4 (3) |
C5—C6—C7—C8 | 0.4 (3) | C10—C9—C14—C13 | 0.5 (2) |
C4—C3—C8—C7 | 0.5 (2) | N2—C9—C14—C13 | −177.39 (14) |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1N···S2i | 0.88 (1) | 2.50 (2) | 3.3581 (13) | 167 (2) |
N2—H2N···S2ii | 0.87 (1) | 2.52 (1) | 3.3819 (13) | 167 (2) |
C6—H6···Cg1iii | 0.95 | 2.61 | 3.5314 (19) | 161 |
Symmetry codes: (i) −x, −y+1, −z+1; (ii) x+1, y, z; (iii) x−1, y−1, z. |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1N···S2i | 0.878 (14) | 2.497 (15) | 3.3581 (13) | 167.0 (16) |
N2—H2N···S2ii | 0.874 (13) | 2.524 (14) | 3.3819 (13) | 167.4 (16) |
C6—H6···Cg1iii | 0.95 | 2.61 | 3.5314 (19) | 161 |
Symmetry codes: (i) −x, −y+1, −z+1; (ii) x+1, y, z; (iii) x−1, y−1, z. |
Acknowledgements
Support for the project came from Universiti Putra Malaysia (UPM) under their Research University Grant Scheme (RUGS No. 9419400) and the Science Fund under the Ministry of Science, Technology and Innovation (MOSTI) (06-01-04-SF1810). We also wish to thank Ms Khadijah Densabali for collecting the intensity data. NFAA wishes to thank UPM for the Graduate Research Fellowship award.
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