organic compounds
of [1,1′:3′,1′′-terphenyl]-2′,3,3′′-tricarboxylic acid
aDepartment of Chemistry and Biochemistry, University of Montana, 32 Campus Dr., Missoula, Montana 59812, USA
*Correspondence e-mail: orion.berryman@umontana.edu
The 21H14O6, comprises two symmetrically independent molecules that form a locally centrosymmetric hydrogen-bonded dimer, with the planes of the corresponding carboxylic acid groups rotated by 15.8 (1) and 17.5 (1)° relative to those of the adjacent benzene rings. The crystal as a whole, however, exhibits a noncentrosymmetric packing, described by the polar Pca21. The dimers form layers along the ab plane, being interconnected by hydrogen bonds involving the remaining carboxylic acid groups. The plane of the central carboxylic acid group forms dihedral angles of 62.5 (1) and 63.0 (1)° with those of the adjacent benzene rings and functions as a hydrogen-bond donor and acceptor. As a donor, it interconnects adjacent layers, while as an acceptor it stabilizes the packing within the layers. The `distal' carboxylic acid groups are nearly coplanar with the planes of the adjacent benzene rings, forming dihedral angles of 1.8 (1) and 7.1 (1)°. These groups also form intra- and inter-layer hydrogen bonds, but with `reversed' functionality, as compared with the central carboxylic acid groups.
of the title compound, CKeywords: crystal structure; hydrogen bonding; meta-terphenyl.
CCDC reference: 1418223
1. Related literature
For a detailed discussion on local centers of symmetry in the Pca21, see: Marsh et al. (1998). For the synthesis of the starting material 3,3′′-dimethyl-[1,1′:3′,1′′-terphenyl]-2′-carboxylic acid, see: Du et al. (1986).
2. Experimental
2.1. Crystal data
|
2.3. Refinement
|
Data collection: APEX2 (Bruker, 2012); cell SAINT (Bruker, 2012); data reduction: SAINT; program(s) used to solve structure: SHELXT (Sheldrick, 2015a); program(s) used to refine structure: SHELXL2014 (Sheldrick, 2015b); molecular graphics: OLEX2 (Dolomanov et al., 2009); software used to prepare material for publication: OLEX2.
Supporting information
CCDC reference: 1418223
https://doi.org/10.1107/S2056989015015029/ld2133sup1.cif
contains datablock I. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S2056989015015029/ld2133Isup2.hkl
Supporting information file. DOI: https://doi.org/10.1107/S2056989015015029/ld2133Isup3.cml
3,3''-dimethyl-[1,1':3',1''-terphenyl]-2'-carboxylic acid (0.432 g, 1.4 mmol) synthesized according to Du et al. (1986). The starting material was dissolved in 15 ml pyridine and brought to reflux. KMnO4 (0.50 g, 3.1 mmol) in 1 ml of water was added, and allowed to react for 2 hours. Subsequently, 3 more additions of KMnO4 (0.25 g, 1.6 mmol) in 1.5 ml of water were added every 2 hours for a total of 4 additions. After six hours, 10 ml of water was added and the reaction was refluxed overnight. The reaction mixture was filtered while hot to remove solid MnO2. The filtrate was then concentrated under reduced pressure, and treated by 12M HCl. The resulting white precipitate was then filtered and purified via silica gel column δ 7.46 (d, 2H J = 8 Hz), 7.58 (t, 2H, J = 8 Hz), 7.61 (t, 1H, J = 7.2 Hz), 7.68 (d, 2H, J = 8Hz), 7.97 (d, 2H, J = 8 Hz), 8.01 (s, 2H), 13.01 (s, O-H). 13C NMR (DMSO, 100 MHz): δ 128.4, 128.7, 129.1, 129.2, 129.3, 130.8, 132.7, 133.9, 138.0, 140.39, 167.0, 169.7. Single crystals suitable for X-ray diffraction were obtained by vapor diffusion of hexane into an ethyl acetate solution of the title compound.
(50/50 hexanes/ethyl acetate with 0.5% acetic acid) to give of the title compound. (0.366 g Yield 70%) 1H NMR (DMSO, 400 MHz):All H atoms were located in difference Fourier maps but finally their positions were determined geometrically, except for the carboxy H atoms that were refined with isotropic thermal parameters. The O6—H6 bond length in the carboxylic acid dimer was restrained at the distance from the corresponding residual electron density peak to the oxygen (0.996 (2)Å) . This was done due to unreasonable lengthening (> 1.4 Å) of the H—O bond during the
All other H atoms were refined using a riding model with fixed isotropic displacement parameters [Uiso(H) = 1.2Ueq(C) for the C(H) groups]. Additional crystal data, data collection and structure details are summarized in Table 1.For a detailed discussion on local centers of symmetry in the
Pca21, see: Marsh et al. (1998). For the synthesis of the starting material 3,3''-dimethyl-[1,1':3',1''-terphenyl]-2'-carboxylic acid, see: Du et al. (1986).3,3''-dimethyl-[1,1':3',1''-terphenyl]-2'-carboxylic acid (0.432 g, 1.4 mmol) synthesized according to Du et al. (1986). The starting material was dissolved in 15 ml pyridine and brought to reflux. KMnO4 (0.50 g, 3.1 mmol) in 1 ml of water was added, and allowed to react for 2 hours. Subsequently, 3 more additions of KMnO4 (0.25 g, 1.6 mmol) in 1.5 ml of water were added every 2 hours for a total of 4 additions. After six hours, 10 ml of water was added and the reaction was refluxed overnight. The reaction mixture was filtered while hot to remove solid MnO2. The filtrate was then concentrated under reduced pressure, and treated by 12M HCl. The resulting white precipitate was then filtered and purified via silica gel column δ 7.46 (d, 2H J = 8 Hz), 7.58 (t, 2H, J = 8 Hz), 7.61 (t, 1H, J = 7.2 Hz), 7.68 (d, 2H, J = 8Hz), 7.97 (d, 2H, J = 8 Hz), 8.01 (s, 2H), 13.01 (s, O-H). 13C NMR (DMSO, 100 MHz): δ 128.4, 128.7, 129.1, 129.2, 129.3, 130.8, 132.7, 133.9, 138.0, 140.39, 167.0, 169.7. Single crystals suitable for X-ray diffraction were obtained by vapor diffusion of hexane into an ethyl acetate solution of the title compound.
(50/50 hexanes/ethyl acetate with 0.5% acetic acid) to give of the title compound. (0.366 g Yield 70%) 1H NMR (DMSO, 400 MHz): detailsAll H atoms were located in difference Fourier maps but finally their positions were determined geometrically, except for the carboxy H atoms that were refined with isotropic thermal parameters. The O6—H6 bond length in the carboxylic acid dimer was restrained at the distance from the corresponding residual electron density peak to the oxygen (0.996 (2)Å) . This was done due to unreasonable lengthening (> 1.4 Å) of the H—O bond during the
All other H atoms were refined using a riding model with fixed isotropic displacement parameters [Uiso(H) = 1.2Ueq(C) for the C(H) groups]. Additional crystal data, data collection and structure details are summarized in Table 1.Data collection: APEX2 (Bruker, 2012); cell
SAINT (Bruker, 2012); data reduction: SAINT (Bruker, 2012); program(s) used to solve structure: SHELXT (Sheldrick, 2015a); program(s) used to refine structure: SHELXL2014 (Sheldrick, 2015b); molecular graphics: OLEX2 (Dolomanov et al., 2009); software used to prepare material for publication: OLEX2 (Dolomanov et al., 2009).Fig. 1. : The asymmetric unit of the title compound, with displacement elipsoids drawn at 50% probability level. Hydrogen atoms presented by spheres of an arbitrary radius. Intra-dimer hydrogen bonds are represented by dotted lines. | |
Fig. 2. : Packing view along b axis. Hydrogen bonds are represented by dotted lines. |
C21H14O6 | Dx = 1.409 Mg m−3 |
Mr = 362.32 | Mo Kα radiation, λ = 0.71073 Å |
Orthorhombic, Pca21 | Cell parameters from 9141 reflections |
a = 23.1735 (9) Å | θ = 3.1–25.7° |
b = 7.2480 (2) Å | µ = 0.10 mm−1 |
c = 20.3320 (8) Å | T = 100 K |
V = 3415.0 (2) Å3 | Needle, clear |
Z = 8 | 0.3 × 0.05 × 0.05 mm |
F(000) = 1504 |
Bruker D8 VENTURE DUO diffractometer | 6467 independent reflections |
Radiation source: sealed tube, fine-focus | 5899 reflections with I > 2σ(I) |
TRIUMPH graphite monochromator | Rint = 0.028 |
Detector resolution: 10.5 pixels mm-1 | θmax = 25.7°, θmin = 3.0° |
ω and φ scans | h = −28→28 |
Absorption correction: multi-scan (SADABS; Bruker, 2012) | k = −7→8 |
Tmin = 0.695, Tmax = 0.745 | l = −24→24 |
46489 measured reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Hydrogen site location: mixed |
R[F2 > 2σ(F2)] = 0.037 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.091 | w = 1/[σ2(Fo2) + (0.0518P)2 + 1.0855P] where P = (Fo2 + 2Fc2)/3 |
S = 1.05 | (Δ/σ)max < 0.001 |
6467 reflections | Δρmax = 0.27 e Å−3 |
511 parameters | Δρmin = −0.17 e Å−3 |
2 restraints |
C21H14O6 | V = 3415.0 (2) Å3 |
Mr = 362.32 | Z = 8 |
Orthorhombic, Pca21 | Mo Kα radiation |
a = 23.1735 (9) Å | µ = 0.10 mm−1 |
b = 7.2480 (2) Å | T = 100 K |
c = 20.3320 (8) Å | 0.3 × 0.05 × 0.05 mm |
Bruker D8 VENTURE DUO diffractometer | 6467 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2012) | 5899 reflections with I > 2σ(I) |
Tmin = 0.695, Tmax = 0.745 | Rint = 0.028 |
46489 measured reflections |
R[F2 > 2σ(F2)] = 0.037 | 2 restraints |
wR(F2) = 0.091 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.05 | Δρmax = 0.27 e Å−3 |
6467 reflections | Δρmin = −0.17 e Å−3 |
511 parameters |
Experimental. SADABS-2012/1 (Bruker,2012) was used for absorption correction. wR2(int) was 0.0509 before and 0.0455 after correction. The Ratio of minimum to maximum transmission is 0.9326. The λ/2 correction factor is 0.0015. |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
x | y | z | Uiso*/Ueq | ||
O1 | 0.96578 (9) | 0.7615 (3) | 0.28358 (11) | 0.0228 (5) | |
O2 | 0.89715 (9) | 0.5814 (3) | 0.32756 (11) | 0.0244 (5) | |
H2 | 0.8852 (17) | 0.572 (5) | 0.285 (2) | 0.042 (11)* | |
O3 | 1.10167 (9) | 0.0388 (3) | 0.28278 (11) | 0.0303 (5) | |
O4 | 1.01069 (10) | 0.0942 (3) | 0.31188 (12) | 0.0306 (5) | |
H4 | 1.006 (2) | −0.025 (8) | 0.301 (3) | 0.085 (18)* | |
O5 | 0.65152 (9) | 0.9096 (3) | 0.43665 (11) | 0.0258 (5) | |
O6 | 0.70682 (9) | 0.7133 (3) | 0.49305 (12) | 0.0285 (5) | |
C1 | 0.95397 (12) | 0.7560 (4) | 0.40061 (15) | 0.0188 (6) | |
C2 | 1.00836 (13) | 0.7148 (4) | 0.42736 (15) | 0.0200 (6) | |
C3 | 1.02024 (14) | 0.7721 (4) | 0.49135 (16) | 0.0214 (7) | |
H3 | 1.0572 | 0.7495 | 0.5098 | 0.026* | |
C4 | 0.97881 (14) | 0.8613 (4) | 0.52817 (16) | 0.0235 (7) | |
H4A | 0.9872 | 0.8968 | 0.5721 | 0.028* | |
C5 | 0.92531 (13) | 0.8995 (4) | 0.50187 (15) | 0.0228 (7) | |
H5 | 0.8969 | 0.9586 | 0.5282 | 0.027* | |
C6 | 0.91246 (13) | 0.8522 (4) | 0.43706 (15) | 0.0197 (6) | |
C7 | 1.05206 (13) | 0.6053 (4) | 0.38977 (15) | 0.0188 (6) | |
C8 | 1.03776 (13) | 0.4318 (4) | 0.36459 (15) | 0.0201 (7) | |
H8 | 0.9999 | 0.3841 | 0.3704 | 0.024* | |
C9 | 1.07890 (13) | 0.3293 (4) | 0.33113 (14) | 0.0178 (6) | |
C10 | 1.13447 (14) | 0.3978 (4) | 0.32208 (16) | 0.0239 (7) | |
H10 | 1.1625 | 0.3272 | 0.2991 | 0.029* | |
C11 | 1.14841 (13) | 0.5694 (4) | 0.34687 (16) | 0.0251 (7) | |
H11 | 1.1861 | 0.6178 | 0.3404 | 0.030* | |
C12 | 1.10790 (13) | 0.6712 (4) | 0.38102 (15) | 0.0221 (6) | |
H12 | 1.1183 | 0.7878 | 0.3988 | 0.026* | |
C13 | 0.85570 (13) | 0.9045 (4) | 0.40774 (15) | 0.0203 (6) | |
C14 | 0.80514 (13) | 0.8518 (4) | 0.43914 (15) | 0.0212 (7) | |
H14 | 0.8072 | 0.7839 | 0.4790 | 0.025* | |
C15 | 0.75168 (13) | 0.8969 (4) | 0.41302 (16) | 0.0205 (6) | |
C16 | 0.74787 (13) | 0.9963 (4) | 0.35433 (16) | 0.0226 (7) | |
H16 | 0.7113 | 1.0245 | 0.3357 | 0.027* | |
C17 | 0.79797 (13) | 1.0528 (4) | 0.32379 (16) | 0.0243 (7) | |
H17 | 0.7959 | 1.1237 | 0.2846 | 0.029* | |
C18 | 0.85140 (13) | 1.0069 (4) | 0.34989 (16) | 0.0233 (7) | |
H18 | 0.8855 | 1.0459 | 0.3280 | 0.028* | |
C19 | 0.94049 (13) | 0.7010 (4) | 0.33133 (15) | 0.0199 (6) | |
C20 | 1.06555 (13) | 0.1399 (4) | 0.30611 (14) | 0.0209 (6) | |
C21 | 0.69880 (13) | 0.8403 (4) | 0.44841 (16) | 0.0220 (6) | |
O1' | 0.29732 (9) | 0.7389 (3) | 0.70997 (10) | 0.0213 (5) | |
O2' | 0.36530 (10) | 0.9209 (3) | 0.66648 (12) | 0.0265 (5) | |
H2' | 0.376 (2) | 0.949 (7) | 0.706 (3) | 0.070 (15)* | |
O3' | 0.16368 (9) | 1.4521 (3) | 0.71744 (11) | 0.0247 (5) | |
O4' | 0.25240 (10) | 1.4042 (3) | 0.67837 (12) | 0.0282 (5) | |
H4' | 0.2621 (18) | 1.507 (7) | 0.693 (2) | 0.054 (13)* | |
O5' | 0.61435 (9) | 0.6032 (3) | 0.55199 (11) | 0.0247 (5) | |
O6' | 0.55852 (10) | 0.7980 (3) | 0.49534 (11) | 0.0271 (5) | |
C1' | 0.31076 (12) | 0.7424 (4) | 0.59342 (15) | 0.0191 (6) | |
C2' | 0.25613 (13) | 0.7813 (4) | 0.56681 (15) | 0.0193 (6) | |
C3' | 0.24393 (13) | 0.7237 (4) | 0.50299 (16) | 0.0216 (7) | |
H3' | 0.2067 | 0.7449 | 0.4850 | 0.026* | |
C4' | 0.28570 (14) | 0.6353 (4) | 0.46537 (16) | 0.0245 (7) | |
H4'A | 0.2771 | 0.5986 | 0.4216 | 0.029* | |
C5' | 0.33996 (13) | 0.6003 (4) | 0.49149 (16) | 0.0214 (6) | |
H5' | 0.3685 | 0.5418 | 0.4652 | 0.026* | |
C6' | 0.35278 (13) | 0.6504 (4) | 0.55605 (15) | 0.0198 (6) | |
C7' | 0.21240 (13) | 0.8890 (4) | 0.60456 (16) | 0.0209 (7) | |
C8' | 0.22618 (12) | 1.0626 (4) | 0.63010 (14) | 0.0183 (6) | |
H8' | 0.2640 | 1.1105 | 0.6247 | 0.022* | |
C9' | 0.18463 (13) | 1.1658 (4) | 0.66341 (15) | 0.0198 (6) | |
C10' | 0.12932 (13) | 1.0961 (4) | 0.67205 (15) | 0.0212 (6) | |
H10' | 0.1011 | 1.1663 | 0.6949 | 0.025* | |
C11' | 0.11546 (13) | 0.9241 (4) | 0.64717 (17) | 0.0242 (7) | |
H11' | 0.0777 | 0.8760 | 0.6532 | 0.029* | |
C12' | 0.15643 (13) | 0.8211 (4) | 0.61342 (16) | 0.0228 (7) | |
H12' | 0.1464 | 0.7036 | 0.5962 | 0.027* | |
C13' | 0.41042 (13) | 0.6027 (4) | 0.58405 (15) | 0.0198 (6) | |
C14' | 0.46007 (13) | 0.6550 (4) | 0.55043 (15) | 0.0192 (6) | |
H14' | 0.4569 | 0.7180 | 0.5096 | 0.023* | |
C15' | 0.51443 (13) | 0.6154 (4) | 0.57626 (15) | 0.0199 (6) | |
C16' | 0.51981 (13) | 0.5223 (4) | 0.63543 (15) | 0.0231 (7) | |
H16' | 0.5569 | 0.4950 | 0.6528 | 0.028* | |
C17' | 0.47048 (13) | 0.4694 (4) | 0.66912 (16) | 0.0252 (7) | |
H17' | 0.4738 | 0.4067 | 0.7100 | 0.030* | |
C18' | 0.41620 (13) | 0.5075 (4) | 0.64352 (16) | 0.0252 (7) | |
H18' | 0.3827 | 0.4685 | 0.6666 | 0.030* | |
C19' | 0.32344 (12) | 0.7990 (4) | 0.66247 (15) | 0.0183 (6) | |
C20' | 0.19858 (13) | 1.3529 (4) | 0.68902 (15) | 0.0210 (6) | |
C21' | 0.56704 (13) | 0.6716 (4) | 0.53989 (14) | 0.0197 (6) | |
H6' | 0.5939 (17) | 0.824 (6) | 0.477 (2) | 0.045 (12)* | |
H6 | 0.6693 (16) | 0.681 (8) | 0.515 (3) | 0.098 (19)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.0208 (11) | 0.0242 (11) | 0.0235 (11) | 0.0006 (8) | −0.0009 (9) | −0.0026 (9) |
O2 | 0.0228 (12) | 0.0250 (11) | 0.0255 (13) | −0.0031 (9) | −0.0048 (10) | −0.0020 (9) |
O3 | 0.0304 (12) | 0.0302 (12) | 0.0304 (13) | 0.0075 (10) | 0.0024 (10) | −0.0070 (10) |
O4 | 0.0275 (13) | 0.0232 (12) | 0.0411 (14) | −0.0028 (10) | 0.0041 (10) | −0.0084 (10) |
O5 | 0.0209 (11) | 0.0256 (11) | 0.0309 (12) | 0.0030 (9) | 0.0016 (9) | 0.0029 (10) |
O6 | 0.0221 (12) | 0.0292 (12) | 0.0341 (13) | 0.0023 (10) | 0.0037 (11) | 0.0100 (11) |
C1 | 0.0199 (15) | 0.0150 (14) | 0.0215 (15) | −0.0009 (11) | −0.0003 (12) | 0.0006 (11) |
C2 | 0.0192 (15) | 0.0149 (13) | 0.0259 (16) | −0.0022 (11) | −0.0009 (12) | 0.0019 (12) |
C3 | 0.0224 (16) | 0.0195 (15) | 0.0225 (17) | −0.0004 (12) | −0.0040 (14) | 0.0022 (13) |
C4 | 0.0287 (18) | 0.0191 (15) | 0.0228 (16) | 0.0006 (13) | −0.0033 (13) | −0.0010 (12) |
C5 | 0.0252 (17) | 0.0213 (15) | 0.0218 (16) | −0.0007 (12) | 0.0047 (13) | −0.0016 (13) |
C6 | 0.0207 (15) | 0.0149 (14) | 0.0236 (15) | −0.0017 (12) | 0.0019 (13) | 0.0017 (12) |
C7 | 0.0217 (16) | 0.0163 (14) | 0.0183 (15) | 0.0021 (12) | −0.0029 (12) | 0.0022 (12) |
C8 | 0.0181 (15) | 0.0199 (15) | 0.0222 (16) | 0.0020 (12) | −0.0025 (12) | 0.0011 (12) |
C9 | 0.0166 (15) | 0.0189 (14) | 0.0178 (14) | 0.0028 (11) | −0.0020 (12) | 0.0042 (11) |
C10 | 0.0211 (17) | 0.0269 (16) | 0.0235 (16) | 0.0045 (13) | −0.0009 (13) | 0.0041 (13) |
C11 | 0.0166 (16) | 0.0287 (17) | 0.0299 (18) | −0.0010 (12) | −0.0020 (13) | 0.0061 (14) |
C12 | 0.0203 (16) | 0.0222 (15) | 0.0237 (16) | −0.0014 (12) | −0.0056 (13) | 0.0025 (12) |
C13 | 0.0201 (15) | 0.0173 (14) | 0.0234 (16) | 0.0029 (12) | 0.0012 (13) | −0.0033 (12) |
C14 | 0.0255 (17) | 0.0171 (14) | 0.0211 (16) | 0.0024 (12) | −0.0009 (13) | −0.0009 (12) |
C15 | 0.0206 (15) | 0.0158 (13) | 0.0250 (16) | 0.0026 (12) | −0.0001 (12) | −0.0050 (12) |
C16 | 0.0206 (15) | 0.0211 (15) | 0.0262 (17) | 0.0044 (13) | −0.0033 (13) | −0.0026 (13) |
C17 | 0.0252 (17) | 0.0252 (15) | 0.0225 (17) | 0.0048 (13) | 0.0026 (13) | −0.0007 (13) |
C18 | 0.0238 (16) | 0.0227 (15) | 0.0234 (17) | 0.0021 (14) | 0.0065 (12) | 0.0007 (13) |
C19 | 0.0173 (15) | 0.0159 (14) | 0.0264 (16) | 0.0051 (12) | −0.0016 (13) | −0.0044 (12) |
C20 | 0.0226 (17) | 0.0248 (15) | 0.0153 (14) | 0.0081 (13) | −0.0009 (12) | 0.0002 (12) |
C21 | 0.0227 (17) | 0.0170 (14) | 0.0261 (16) | 0.0037 (12) | −0.0006 (13) | −0.0049 (12) |
O1' | 0.0212 (11) | 0.0221 (11) | 0.0207 (11) | −0.0001 (8) | 0.0011 (9) | −0.0013 (9) |
O2' | 0.0268 (12) | 0.0283 (11) | 0.0244 (12) | −0.0108 (9) | −0.0009 (10) | −0.0065 (10) |
O3' | 0.0237 (11) | 0.0205 (11) | 0.0301 (12) | 0.0016 (9) | 0.0070 (10) | −0.0003 (9) |
O4' | 0.0217 (11) | 0.0201 (11) | 0.0428 (15) | −0.0052 (9) | 0.0083 (10) | −0.0080 (11) |
O5' | 0.0205 (12) | 0.0258 (11) | 0.0277 (12) | 0.0002 (9) | 0.0022 (9) | 0.0023 (10) |
O6' | 0.0232 (12) | 0.0300 (12) | 0.0280 (12) | 0.0029 (9) | 0.0047 (10) | 0.0076 (10) |
C1' | 0.0191 (15) | 0.0141 (13) | 0.0241 (16) | −0.0039 (11) | −0.0004 (13) | 0.0006 (12) |
C2' | 0.0209 (16) | 0.0136 (13) | 0.0233 (16) | −0.0028 (11) | −0.0002 (12) | 0.0020 (12) |
C3' | 0.0221 (16) | 0.0162 (14) | 0.0264 (17) | −0.0011 (12) | −0.0064 (13) | 0.0002 (12) |
C4' | 0.0330 (18) | 0.0204 (16) | 0.0201 (15) | −0.0046 (13) | −0.0039 (13) | −0.0020 (12) |
C5' | 0.0235 (17) | 0.0177 (14) | 0.0229 (15) | −0.0012 (12) | 0.0020 (13) | −0.0020 (12) |
C6' | 0.0204 (16) | 0.0157 (13) | 0.0234 (15) | −0.0037 (11) | 0.0000 (12) | −0.0017 (12) |
C7' | 0.0201 (16) | 0.0197 (14) | 0.0227 (16) | −0.0001 (12) | −0.0060 (13) | 0.0049 (12) |
C8' | 0.0140 (15) | 0.0198 (15) | 0.0212 (16) | −0.0025 (11) | −0.0027 (12) | 0.0031 (12) |
C9' | 0.0228 (15) | 0.0182 (14) | 0.0185 (14) | −0.0001 (12) | −0.0024 (13) | 0.0029 (12) |
C10' | 0.0171 (15) | 0.0237 (15) | 0.0227 (15) | 0.0025 (12) | 0.0018 (13) | 0.0025 (12) |
C11' | 0.0151 (16) | 0.0265 (16) | 0.0309 (18) | −0.0040 (12) | −0.0045 (13) | 0.0029 (14) |
C12' | 0.0203 (16) | 0.0181 (14) | 0.0301 (17) | −0.0029 (12) | −0.0057 (13) | −0.0005 (12) |
C13' | 0.0217 (15) | 0.0152 (13) | 0.0226 (16) | −0.0012 (12) | 0.0011 (12) | −0.0024 (12) |
C14' | 0.0240 (16) | 0.0155 (13) | 0.0180 (14) | 0.0003 (11) | 0.0029 (12) | −0.0023 (12) |
C15' | 0.0245 (16) | 0.0146 (14) | 0.0205 (15) | 0.0011 (12) | 0.0003 (12) | −0.0041 (12) |
C16' | 0.0241 (16) | 0.0230 (15) | 0.0221 (16) | 0.0028 (13) | −0.0014 (12) | −0.0017 (12) |
C17' | 0.0275 (17) | 0.0275 (16) | 0.0207 (16) | 0.0011 (13) | −0.0002 (13) | 0.0040 (14) |
C18' | 0.0226 (16) | 0.0256 (16) | 0.0272 (18) | 0.0000 (14) | 0.0057 (13) | 0.0026 (14) |
C19' | 0.0151 (14) | 0.0174 (13) | 0.0223 (15) | 0.0017 (11) | −0.0002 (13) | −0.0004 (12) |
C20' | 0.0211 (16) | 0.0202 (14) | 0.0217 (15) | −0.0021 (13) | 0.0026 (13) | 0.0052 (12) |
C21' | 0.0224 (16) | 0.0167 (13) | 0.0198 (15) | −0.0017 (12) | −0.0019 (12) | −0.0023 (12) |
O1—C19 | 1.216 (4) | O1'—C19' | 1.220 (4) |
O2—H2 | 0.91 (5) | O2'—H2' | 0.87 (6) |
O2—C19 | 1.329 (4) | O2'—C19' | 1.314 (4) |
O3—C20 | 1.209 (4) | O3'—C20' | 1.227 (4) |
O4—H4 | 0.90 (6) | O4'—H4' | 0.84 (5) |
O4—C20 | 1.319 (4) | O4'—C20' | 1.319 (4) |
O5—C21 | 1.229 (4) | O5'—C21' | 1.228 (4) |
O6—C21 | 1.306 (4) | O6'—C21' | 1.303 (4) |
O6—H6 | 1.01 (3) | O6'—H6' | 0.92 (4) |
C1—C2 | 1.405 (4) | C1'—C2' | 1.405 (4) |
C1—C6 | 1.400 (4) | C1'—C6' | 1.404 (4) |
C1—C19 | 1.497 (4) | C1'—C19' | 1.492 (4) |
C2—C3 | 1.393 (5) | C2'—C3' | 1.392 (4) |
C2—C7 | 1.496 (4) | C2'—C7' | 1.491 (4) |
C3—H3 | 0.9500 | C3'—H3' | 0.9500 |
C3—C4 | 1.378 (4) | C3'—C4' | 1.390 (4) |
C4—H4A | 0.9500 | C4'—H4'A | 0.9500 |
C4—C5 | 1.378 (4) | C4'—C5' | 1.388 (4) |
C5—H5 | 0.9500 | C5'—H5' | 0.9500 |
C5—C6 | 1.394 (5) | C5'—C6' | 1.394 (4) |
C6—C13 | 1.493 (4) | C6'—C13' | 1.493 (4) |
C7—C8 | 1.398 (4) | C7'—C8' | 1.398 (4) |
C7—C12 | 1.391 (4) | C7'—C12' | 1.399 (4) |
C8—H8 | 0.9500 | C8'—H8' | 0.9500 |
C8—C9 | 1.387 (4) | C8'—C9' | 1.395 (4) |
C9—C10 | 1.393 (4) | C9'—C10' | 1.389 (4) |
C9—C20 | 1.496 (4) | C9'—C20' | 1.488 (4) |
C10—H10 | 0.9500 | C10'—H10' | 0.9500 |
C10—C11 | 1.380 (5) | C10'—C11' | 1.384 (4) |
C11—H11 | 0.9500 | C11'—H11' | 0.9500 |
C11—C12 | 1.381 (5) | C11'—C12' | 1.389 (5) |
C12—H12 | 0.9500 | C12'—H12' | 0.9500 |
C13—C14 | 1.388 (4) | C13'—C14' | 1.391 (4) |
C13—C18 | 1.394 (5) | C13'—C18' | 1.399 (4) |
C14—H14 | 0.9500 | C14'—H14' | 0.9500 |
C14—C15 | 1.387 (4) | C14'—C15' | 1.394 (4) |
C15—C16 | 1.397 (5) | C15'—C16' | 1.385 (4) |
C15—C21 | 1.479 (5) | C15'—C21' | 1.483 (4) |
C16—H16 | 0.9500 | C16'—H16' | 0.9500 |
C16—C17 | 1.379 (5) | C16'—C17' | 1.387 (4) |
C17—H17 | 0.9500 | C17'—H17' | 0.9500 |
C17—C18 | 1.387 (4) | C17'—C18' | 1.389 (4) |
C18—H18 | 0.9500 | C18'—H18' | 0.9500 |
C19—O2—H2 | 110 (3) | C19'—O2'—H2' | 115 (3) |
C20—O4—H4 | 109 (3) | C20'—O4'—H4' | 117 (3) |
C21—O6—H6 | 111 (3) | C21'—O6'—H6' | 107 (3) |
C2—C1—C19 | 119.7 (3) | C2'—C1'—C19' | 119.0 (3) |
C6—C1—C2 | 121.1 (3) | C6'—C1'—C2' | 120.8 (3) |
C6—C1—C19 | 119.2 (3) | C6'—C1'—C19' | 120.2 (3) |
C1—C2—C7 | 121.5 (3) | C1'—C2'—C7' | 121.3 (3) |
C3—C2—C1 | 118.4 (3) | C3'—C2'—C1' | 118.8 (3) |
C3—C2—C7 | 120.1 (3) | C3'—C2'—C7' | 119.9 (3) |
C2—C3—H3 | 119.7 | C2'—C3'—H3' | 119.7 |
C4—C3—C2 | 120.6 (3) | C4'—C3'—C2' | 120.7 (3) |
C4—C3—H3 | 119.7 | C4'—C3'—H3' | 119.7 |
C3—C4—H4A | 119.7 | C3'—C4'—H4'A | 119.9 |
C5—C4—C3 | 120.7 (3) | C5'—C4'—C3' | 120.3 (3) |
C5—C4—H4A | 119.7 | C5'—C4'—H4'A | 119.9 |
C4—C5—H5 | 119.7 | C4'—C5'—H5' | 119.8 |
C4—C5—C6 | 120.6 (3) | C4'—C5'—C6' | 120.4 (3) |
C6—C5—H5 | 119.7 | C6'—C5'—H5' | 119.8 |
C1—C6—C13 | 121.3 (3) | C1'—C6'—C13' | 121.6 (3) |
C5—C6—C1 | 118.4 (3) | C5'—C6'—C1' | 119.1 (3) |
C5—C6—C13 | 120.2 (3) | C5'—C6'—C13' | 119.3 (3) |
C8—C7—C2 | 120.2 (3) | C8'—C7'—C2' | 120.5 (3) |
C12—C7—C2 | 120.9 (3) | C8'—C7'—C12' | 118.7 (3) |
C12—C7—C8 | 118.9 (3) | C12'—C7'—C2' | 120.8 (3) |
C7—C8—H8 | 120.0 | C7'—C8'—H8' | 119.8 |
C9—C8—C7 | 119.9 (3) | C9'—C8'—C7' | 120.4 (3) |
C9—C8—H8 | 120.0 | C9'—C8'—H8' | 119.8 |
C8—C9—C10 | 120.6 (3) | C8'—C9'—C20' | 120.6 (3) |
C8—C9—C20 | 121.1 (3) | C10'—C9'—C8' | 120.2 (3) |
C10—C9—C20 | 118.3 (3) | C10'—C9'—C20' | 119.2 (3) |
C9—C10—H10 | 120.3 | C9'—C10'—H10' | 120.1 |
C11—C10—C9 | 119.3 (3) | C11'—C10'—C9' | 119.7 (3) |
C11—C10—H10 | 120.3 | C11'—C10'—H10' | 120.1 |
C10—C11—H11 | 119.8 | C10'—C11'—H11' | 119.8 |
C10—C11—C12 | 120.4 (3) | C10'—C11'—C12' | 120.4 (3) |
C12—C11—H11 | 119.8 | C12'—C11'—H11' | 119.8 |
C7—C12—H12 | 119.5 | C7'—C12'—H12' | 119.7 |
C11—C12—C7 | 120.9 (3) | C11'—C12'—C7' | 120.6 (3) |
C11—C12—H12 | 119.5 | C11'—C12'—H12' | 119.7 |
C14—C13—C6 | 119.3 (3) | C14'—C13'—C6' | 119.3 (3) |
C14—C13—C18 | 118.3 (3) | C14'—C13'—C18' | 118.7 (3) |
C18—C13—C6 | 122.3 (3) | C18'—C13'—C6' | 122.0 (3) |
C13—C14—H14 | 119.6 | C13'—C14'—H14' | 119.8 |
C15—C14—C13 | 120.9 (3) | C13'—C14'—C15' | 120.4 (3) |
C15—C14—H14 | 119.6 | C15'—C14'—H14' | 119.8 |
C14—C15—C16 | 120.3 (3) | C14'—C15'—C21' | 119.9 (3) |
C14—C15—C21 | 119.2 (3) | C16'—C15'—C14' | 120.6 (3) |
C16—C15—C21 | 120.4 (3) | C16'—C15'—C21' | 119.5 (3) |
C15—C16—H16 | 120.5 | C15'—C16'—H16' | 120.3 |
C17—C16—C15 | 119.0 (3) | C15'—C16'—C17' | 119.3 (3) |
C17—C16—H16 | 120.5 | C17'—C16'—H16' | 120.3 |
C16—C17—H17 | 119.7 | C16'—C17'—H17' | 119.8 |
C16—C17—C18 | 120.5 (3) | C16'—C17'—C18' | 120.4 (3) |
C18—C17—H17 | 119.7 | C18'—C17'—H17' | 119.8 |
C13—C18—H18 | 119.5 | C13'—C18'—H18' | 119.7 |
C17—C18—C13 | 120.9 (3) | C17'—C18'—C13' | 120.6 (3) |
C17—C18—H18 | 119.5 | C17'—C18'—H18' | 119.7 |
O1—C19—O2 | 123.6 (3) | O1'—C19'—O2' | 123.8 (3) |
O1—C19—C1 | 123.7 (3) | O1'—C19'—C1' | 123.3 (3) |
O2—C19—C1 | 112.7 (3) | O2'—C19'—C1' | 112.9 (3) |
O3—C20—O4 | 123.3 (3) | O3'—C20'—O4' | 122.4 (3) |
O3—C20—C9 | 123.1 (3) | O3'—C20'—C9' | 123.8 (3) |
O4—C20—C9 | 113.6 (2) | O4'—C20'—C9' | 113.9 (3) |
O5—C21—O6 | 123.4 (3) | O5'—C21'—O6' | 123.9 (3) |
O5—C21—C15 | 122.1 (3) | O5'—C21'—C15' | 121.5 (3) |
O6—C21—C15 | 114.6 (3) | O6'—C21'—C15' | 114.5 (3) |
C1—C2—C3—C4 | 2.2 (4) | C1'—C2'—C3'—C4' | −2.3 (4) |
C1—C2—C7—C8 | −54.7 (4) | C1'—C2'—C7'—C8' | 54.2 (4) |
C1—C2—C7—C12 | 127.4 (3) | C1'—C2'—C7'—C12' | −127.7 (3) |
C1—C6—C13—C14 | 125.4 (3) | C1'—C6'—C13'—C14' | −127.7 (3) |
C1—C6—C13—C18 | −55.3 (4) | C1'—C6'—C13'—C18' | 52.0 (4) |
C2—C1—C6—C5 | −2.8 (4) | C2'—C1'—C6'—C5' | 1.0 (4) |
C2—C1—C6—C13 | 176.9 (3) | C2'—C1'—C6'—C13' | −178.1 (3) |
C2—C1—C19—O1 | −63.6 (4) | C2'—C1'—C19'—O1' | 62.6 (4) |
C2—C1—C19—O2 | 117.5 (3) | C2'—C1'—C19'—O2' | −117.0 (3) |
C2—C3—C4—C5 | −1.6 (5) | C2'—C3'—C4'—C5' | 1.2 (4) |
C2—C7—C8—C9 | −178.5 (3) | C2'—C7'—C8'—C9' | 177.8 (3) |
C2—C7—C12—C11 | 179.4 (3) | C2'—C7'—C12'—C11' | −178.3 (3) |
C3—C2—C7—C8 | 122.8 (3) | C3'—C2'—C7'—C8' | −123.3 (3) |
C3—C2—C7—C12 | −55.2 (4) | C3'—C2'—C7'—C12' | 54.8 (4) |
C3—C4—C5—C6 | −1.4 (5) | C3'—C4'—C5'—C6' | 1.1 (4) |
C4—C5—C6—C1 | 3.5 (4) | C4'—C5'—C6'—C1' | −2.2 (4) |
C4—C5—C6—C13 | −176.2 (3) | C4'—C5'—C6'—C13' | 176.9 (3) |
C5—C6—C13—C14 | −54.9 (4) | C5'—C6'—C13'—C14' | 53.2 (4) |
C5—C6—C13—C18 | 124.4 (3) | C5'—C6'—C13'—C18' | −127.1 (3) |
C6—C1—C2—C3 | 0.0 (4) | C6'—C1'—C2'—C3' | 1.2 (4) |
C6—C1—C2—C7 | 177.4 (3) | C6'—C1'—C2'—C7' | −176.3 (3) |
C6—C1—C19—O1 | 114.7 (3) | C6'—C1'—C19'—O1' | −116.9 (3) |
C6—C1—C19—O2 | −64.1 (3) | C6'—C1'—C19'—O2' | 63.6 (4) |
C6—C13—C14—C15 | −179.5 (3) | C6'—C13'—C14'—C15' | 178.7 (3) |
C6—C13—C18—C17 | 179.8 (3) | C6'—C13'—C18'—C17' | −178.3 (3) |
C7—C2—C3—C4 | −175.3 (3) | C7'—C2'—C3'—C4' | 175.2 (3) |
C7—C8—C9—C10 | −0.2 (4) | C7'—C8'—C9'—C10' | 0.6 (4) |
C7—C8—C9—C20 | 177.4 (3) | C7'—C8'—C9'—C20' | −178.2 (3) |
C8—C7—C12—C11 | 1.4 (4) | C8'—C7'—C12'—C11' | −0.2 (5) |
C8—C9—C10—C11 | 0.1 (4) | C8'—C9'—C10'—C11' | −0.3 (4) |
C8—C9—C20—O3 | −172.2 (3) | C8'—C9'—C20'—O3' | 178.4 (3) |
C8—C9—C20—O4 | 7.9 (4) | C8'—C9'—C20'—O4' | −1.5 (4) |
C9—C10—C11—C12 | 0.8 (5) | C9'—C10'—C11'—C12' | −0.3 (5) |
C10—C9—C20—O3 | 5.5 (4) | C10'—C9'—C20'—O3' | −0.5 (5) |
C10—C9—C20—O4 | −174.4 (3) | C10'—C9'—C20'—O4' | 179.6 (3) |
C10—C11—C12—C7 | −1.5 (5) | C10'—C11'—C12'—C7' | 0.5 (5) |
C12—C7—C8—C9 | −0.5 (4) | C12'—C7'—C8'—C9' | −0.3 (4) |
C13—C14—C15—C16 | 0.1 (4) | C13'—C14'—C15'—C16' | 0.5 (4) |
C13—C14—C15—C21 | −179.2 (3) | C13'—C14'—C15'—C21' | 179.9 (3) |
C14—C13—C18—C17 | −0.9 (4) | C14'—C13'—C18'—C17' | 1.4 (4) |
C14—C15—C16—C17 | −1.7 (4) | C14'—C15'—C16'—C17' | −0.4 (4) |
C14—C15—C21—O5 | 163.2 (3) | C14'—C15'—C21'—O5' | −162.4 (3) |
C14—C15—C21—O6 | −16.1 (4) | C14'—C15'—C21'—O6' | 18.1 (4) |
C15—C16—C17—C18 | 1.9 (5) | C15'—C16'—C17'—C18' | 0.7 (5) |
C16—C15—C21—O5 | −16.1 (4) | C16'—C15'—C21'—O5' | 17.0 (4) |
C16—C15—C21—O6 | 164.5 (3) | C16'—C15'—C21'—O6' | −162.6 (3) |
C16—C17—C18—C13 | −0.6 (5) | C16'—C17'—C18'—C13' | −1.2 (5) |
C18—C13—C14—C15 | 1.1 (4) | C18'—C13'—C14'—C15' | −1.0 (4) |
C19—C1—C2—C3 | 178.3 (3) | C19'—C1'—C2'—C3' | −178.2 (3) |
C19—C1—C2—C7 | −4.2 (4) | C19'—C1'—C2'—C7' | 4.3 (4) |
C19—C1—C6—C5 | 178.9 (3) | C19'—C1'—C6'—C5' | −179.5 (3) |
C19—C1—C6—C13 | −1.4 (4) | C19'—C1'—C6'—C13' | 1.3 (4) |
C20—C9—C10—C11 | −177.6 (3) | C20'—C9'—C10'—C11' | 178.6 (3) |
C21—C15—C16—C17 | 177.7 (3) | C21'—C15'—C16'—C17' | −179.7 (3) |
D—H···A | D—H | H···A | D···A | D—H···A |
O2—H2···O3′i | 0.91 (5) | 1.79 (5) | 2.657 (3) | 159 (4) |
O4—H4···O1ii | 0.90 (6) | 1.84 (6) | 2.689 (3) | 156 (5) |
O2′—H2′···O3iii | 0.87 (6) | 1.76 (6) | 2.628 (3) | 171 (5) |
O4′—H4′···O1′iv | 0.84 (5) | 1.90 (5) | 2.717 (3) | 166 (4) |
O6′—H6′···O5 | 0.92 (4) | 1.69 (4) | 2.593 (3) | 168 (4) |
O6—H6···O5′ | 1.01 (3) | 1.58 (3) | 2.581 (3) | 172 (6) |
Symmetry codes: (i) −x+1, −y+2, z−1/2; (ii) x, y−1, z; (iii) −x+3/2, y+1, z+1/2; (iv) x, y+1, z. |
D—H···A | D—H | H···A | D···A | D—H···A |
O2—H2···O3'i | 0.91 (5) | 1.79 (5) | 2.657 (3) | 159 (4) |
O4—H4···O1ii | 0.90 (6) | 1.84 (6) | 2.689 (3) | 156 (5) |
O2'—H2'···O3iii | 0.87 (6) | 1.76 (6) | 2.628 (3) | 171 (5) |
O4'—H4'···O1'iv | 0.84 (5) | 1.90 (5) | 2.717 (3) | 166 (4) |
O6'—H6'···O5 | 0.92 (4) | 1.69 (4) | 2.593 (3) | 168 (4) |
O6—H6···O5' | 1.01 (3) | 1.58 (3) | 2.581 (3) | 172 (6) |
Symmetry codes: (i) −x+1, −y+2, z−1/2; (ii) x, y−1, z; (iii) −x+3/2, y+1, z+1/2; (iv) x, y+1, z. |
Acknowledgements
This work was supported by grants from the National Science Foundation (NSF)–MRI (CHE-1337908) and the National Institutes of Health (CoBRE NIGMS P20GM103546). The University of Montana and the Center for Biomolecular Structure and Dynamics are aknowledged for their support of the University of Montana X-ray diffraction core facility.
References
Bruker (2012). APEX2 and SAINT. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Dolomanov, O. V., Bourhis, L. J., Gildea, R. J., Howard, J. A. K. & Puschmann, H. (2009). J. Appl. Cryst. 42, 339–341. Web of Science CrossRef CAS IUCr Journals Google Scholar
Du, C. J. F., Hart, H. & Ng, K. K. D. (1986). J. Org. Chem. 51, 3162–3165. CrossRef CAS Web of Science Google Scholar
Marsh, R. E., Schomaker, V. & Herbstein, F. H. (1998). Acta Cryst. B54, 921–924. Web of Science CrossRef CAS IUCr Journals Google Scholar
Sheldrick, G. M. (2015a). Acta Cryst. A71, 3–8. Web of Science CrossRef IUCr Journals Google Scholar
Sheldrick, G. M. (2015b). Acta Cryst. C71, 3–8. Web of Science CrossRef IUCr Journals Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.