research communications
Crystal structures of 4-methoxy-N-(4-methylphenyl)benzenesulfonamide and N-(4-fluorophenyl)-4-methoxybenzenesulfonamide
aDepartment of PG Studies and Research in Chemistry, St Aloysius College, Mangalore, India, bInstitution of Excellence, University of Mysore, Mysuru-6, India, cDepartment of Physics, University of Mysore, Mysuru-6, India, and dDepartment of Chemistry, University College of Science, Tumkur University, Tumkur 572 103, India
*Correspondence e-mail: pasuchetan@yahoo.co.in
Crystal structures of two N-(aryl)arylsulfonamides, namely, 4-methoxy-N-(4-methylphenyl)benzenesulfonamide, C14H15NO3S, (I), and N-(4-fluorophenyl)-4-methoxybenzenesulfonamide, C13H12FNO3S, (II), were determined and analyzed. In (I), the benzenesulfonamide ring is disordered over two orientations, in a 0.516 (7):0.484 (7) ratio, which are inclined to each other at 28.0 (1)°. In (I), the major component of the sulfonyl benzene ring and the aniline ring form a dihedral angle of 63.36 (19)°, while in (II), the planes of the two benzene rings form a dihedral angle of 44.26 (13)°. In the of (I), N—H⋯O hydrogen bonds form infinite C(4) chains extended in [010], and intermolecular C—H⋯πaryl interactions link these chains into layers parallel to the ab plane. The of (II) features N—H⋯O hydrogen bonds forming infinite one dimensional C(4) chains along [001]. Further, a pair of C—H⋯O intermolecular interactions consolidate the crystal packing of (II) into a three-dimensional supramolecular architecture.
CCDC reference: 1432501
1. Chemical context
Sulfonamide drugs were the first among the chemotherapeutic agents to be used for curing and preventing bacterial infection in human beings (Shiva Prasad et al., 2011). They play a vital role as a key constituent in a number of biologically active molecules. Up to now, have been known to exhibit a wide variety of biological activities, such as antibacterial (Subhakara Reddy et al., 2012; Himel et al., 1971), antifungal (Hanafy et al., 2007), antiinflamatory (Kuçukguzel et al., 2013), antitumor (Ghorab et al., 2011), anticancer (Mansour et al., 2011), anti-HIV (Sahu et al., 2007) and antitubercular activities (Vora & Mehta, 2012). In recent years, extensive research studies have been carried out on the synthesis and evaluation of pharmacological activities of molecules containing the sulfonamide moiety for different activities, and have been reported to be important pharmacophores (Mohan et al., 2013).
With these considerations in mind and based on our structural study of N-(4-substituted-phenyl)-4-methoxybenzenesulfonamides (Vinola et al., 2015), we report herein the crystal structures of 4-methoxy-N-(4-methylphenyl)benzenesulfonamide, (I), and N-(4-fluorophenyl)-4-methoxybenzenesulfonamide, (II).
2. Structural commentary
In (I) (Fig. 1), the benzenesulfonamide ring is disordered due to rotation across the Car—S(O2) bond over two orientations, with atoms C2, C3, C5 and C6 occupying two positions with a 0.516 (7):0.484 (7) ratio. The dihedral angle between the two parts of disordered benzene ring, i.e. C1/C2A/C3A/C4/C5A/C6A and C1/C2B/C3B/C4/C5B/C6B, is 28.0 (1)°. The dihedral angle between the sulfonyl benzene ring (considering the major component) and the aniline ring is 63.36 (19)°, and the N—C bond in the C—SO2—NH—C segment has a gauche torsion with respect to the S=O bonds. Further, the molecule is twisted at the S—N bond, with a C1—S1—N1—C7 torsion angle of 66.33 (19)°. The methoxy group in the sulfonylbenzene ring is in the same plane as that of the major component of the disordered sulfonylbenzene ring, the torsion angle C5A—C4—O3—C14 being −176.2 (4)°, while it deviates slightly from planarity with respect to the minor component, the C5B—C4—O3—C14 torsion angle being 165.9 (4)°.
In (II) (Fig. 2), the dihedral angle between the two benzene rings of 44.26 (13)° is less than that observed in (I), and the N—C bond in the C—SO2—NH—C segment has a gauche torsion with respect to the S=O bonds. Further, the molecule is twisted at the S—N bond, with a C1—S1—N1—C7 torsion angle of 68.4 (2)°. Similar to (I), the methoxy group in the sulfonylbenzene ring is in the same plane as that of the sulfonylbenzene ring, the C5—C4—O3—C13 torsion angle being 177.0 (2)°.
3. Supramolecular features
In the , N1—H1⋯O2 hydrogen bonds (Table 1) link the molecules into infinite one-dimensional C(4) chains along [010]. Neighbouring C(4) chains are interconnected via C—H⋯πaryl interactions (Table 1) into layers (Fig. 3) parallel to the ab plane.
of (I)The features N1—H1⋯O2 hydrogen bonds (Fig. 4 and Table 2), forming infinite one-dimensional C(4) chains along [001]. Further, weak intermolecular C—H⋯O interactions (Table 2) consolidate the crystal packing of (II), leading to a three-dimensional supramolecular architecture (Fig. 5).
of (II)4. Database survey
Three N-(4-substituted-phenyl)-4-methoxybenzenesulfonamides (Vinola et al., 2015), namely, 4-methoxy-N-(phenyl)benzenesulfonamide, (III), 4-methoxy-N-(4-methoxyphenyl)benzenesulfonamide, (IV), and N-(4-chlorophenyl)-4-methoxybenzenesulfonamide, (V), have been reported previously. Compounds (IV) and (V) crystallize in monoclinic syngony, while compound (III) crystallizes in orthorhombic syngony. The dihedral angles between the two benzene rings in (III), (IV) and (V) are 55.1 (1), 56.3 (1) and 42.6 (1)°, respectively. Comparison of the dihedral angles between the two benzene rings in (I)–(V) shows that, when an electron-donating substituent is introduced into the para position of the aniline ring of (I) it results in a slight increase in the dihedral angle, whereas, when an electron-withdrawing substituent is introduced it decreases the dihedral angle. Further, the molecules of (III), (IV) and (V) are twisted at the S—N bond, with C1—S1—N1—C7 torsion angles of −72.9 (1), 66.2 (1) and 72.5 (1)°, respectively. These values are similar to those observed in (I) and (II).
Comparison of the crystal structures (I) and (V) shows that the effect of introducing an electron-donating substituent into the para position of the aniline ring of (I) is quite different than that due to electron-withdrawing substituents. The of (III) features N—H⋯O hydrogen bonds that form C(4) chains, and thus, the supramolecular architecture is one-dimensional. In (IV), one N—H⋯O hydrogen bond and two alternating C—H⋯πaryl (centroid of aniline ring) interactions direct a two-dimensional architecture. This is quite similar to the of (I). Thus, the methyl and methoxy groups on the aniline ring have similar influence on the crystal structures of these compounds. However, the crystal structures of (II) and (V) are very different. The of (V) features N—H⋯O hydrogen bonds that form C(4) chains. Further, (V) does not feature any structuredirecting intermolecular interactions, and thus, the structure is one-dimensional. In contrast to this, the of (II) features an N—H⋯O and two C—H⋯O interactions, leading to a three-dimensional architecture. Thus, the Cl and F atoms on the aniline ring have very different influences on the crystal structures of these compounds.
5. Synthesis and crystallization
Compounds (I) and (II) were prepared according to the literature method of Vinola et al. (2015). The purity of the compounds were checked by determining the melting points. Single crystals used for X-ray diffraction studies were obtained by slow evaporation of ethanol solutions of the compounds at room temperature.
6. Refinement
Crystal data, data collection and structure . The amino H atoms were located in a difference map and were refined isotropically with the bond-length restraint N—H = 0.90 (1) Å. To improve considerably the values of R1, wR2, and S (goodness-of-fit), a partially obscured reflection (i.e. 100) was omitted from the final of (I). The two parts (A and B) of the disordered benzenesulfonyl ring in (I) were restrained to be planar (FLAT instruction), and thus, the r.m.s. deviations (considering non-H atoms) observed for the planes defining the two rings are 0.047 (1) (major-component ring A) and 0.054 (1) Å (minor-component ring B). The disordered atoms (C2, C3, C5 and C6) in both components were isotropically refined, and the C—C bond lengths were restrained to 1.391 (1) Å.
details are summarized in Table 3
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Supporting information
CCDC reference: 1432501
https://doi.org/10.1107/S2056989015019787/cv5497sup1.cif
contains datablocks I, II, global. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S2056989015019787/cv5497Isup2.hkl
Structure factors: contains datablock II. DOI: https://doi.org/10.1107/S2056989015019787/cv5497IIsup3.hkl
Supporting information file. DOI: https://doi.org/10.1107/S2056989015019787/cv5497Isup4.cml
Supporting information file. DOI: https://doi.org/10.1107/S2056989015019787/cv5497IIsup5.cml
For both compounds, data collection: APEX2 (Bruker, 2009); cell
APEX2 and SAINT-Plus (Bruker, 2009); data reduction: SAINT-Plus and XPREP (Bruker, 2009); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: Mercury (Macrae et al., 2008); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008).C14H15NO3S | Prism |
Mr = 277.33 | Dx = 1.375 Mg m−3 |
Monoclinic, P21/c | Cu Kα radiation, λ = 1.54178 Å |
a = 14.5604 (5) Å | Cell parameters from 178 reflections |
b = 5.2459 (2) Å | θ = 5.0–64.1° |
c = 17.6094 (6) Å | µ = 2.19 mm−1 |
β = 95.205 (2)° | T = 296 K |
V = 1339.50 (8) Å3 | Prism, colourless |
Z = 4 | 0.33 × 0.27 × 0.21 mm |
F(000) = 584 |
Bruker APEXII diffractometer | 2047 reflections with I > 2σ(I) |
Radiation source: fine-focus sealed tube | Rint = 0.042 |
Graphite monochromator | θmax = 64.1°, θmin = 5.0° |
phi and φ scans | h = −16→16 |
Absorption correction: multi-scan (SADABS; Bruker, 2009) | k = −5→6 |
Tmin = 0.517, Tmax = 0.632 | l = −20→20 |
7071 measured reflections | 1 standard reflections every 1 reflections |
2139 independent reflections | intensity decay: 0.1% |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.048 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.145 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.12 | w = 1/[σ2(Fo2) + (0.095P)2 + 0.6515P] where P = (Fo2 + 2Fc2)/3 |
2139 reflections | (Δ/σ)max = 0.001 |
175 parameters | Δρmax = 0.45 e Å−3 |
19 restraints | Δρmin = −0.43 e Å−3 |
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
H1 | 0.7020 (19) | 0.376 (2) | 0.4174 (15) | 0.033 (7)* | |
C1 | 0.87525 (15) | 0.0577 (4) | 0.41335 (12) | 0.0223 (5) | |
C2A | 0.9220 (3) | 0.2925 (9) | 0.4259 (2) | 0.0227 (12)* | 0.516 (7) |
H2A | 0.8960 | 0.4215 | 0.4532 | 0.027* | 0.516 (7) |
C3A | 1.0070 (3) | 0.3298 (9) | 0.3973 (3) | 0.0243 (12)* | 0.516 (7) |
H3A | 1.0392 | 0.4819 | 0.4057 | 0.029* | 0.516 (7) |
C2B | 0.9452 (3) | 0.1901 (9) | 0.4561 (3) | 0.0230 (13)* | 0.484 (7) |
H2B | 0.9355 | 0.2534 | 0.5040 | 0.028* | 0.484 (7) |
C3B | 1.0299 (3) | 0.2268 (10) | 0.4262 (3) | 0.0231 (13)* | 0.484 (7) |
H3B | 1.0768 | 0.3160 | 0.4540 | 0.028* | 0.484 (7) |
C4 | 1.04337 (15) | 0.1285 (4) | 0.35455 (12) | 0.0226 (5) | |
C5A | 0.9913 (3) | −0.0795 (10) | 0.3344 (3) | 0.0190 (14)* | 0.516 (7) |
H5A | 1.0125 | −0.1992 | 0.3011 | 0.023* | 0.516 (7) |
C6A | 0.9068 (4) | −0.1143 (11) | 0.3631 (3) | 0.0199 (16)* | 0.516 (7) |
H6A | 0.8710 | −0.2557 | 0.3483 | 0.024* | 0.516 (7) |
C5B | 0.9778 (4) | −0.0372 (12) | 0.3192 (4) | 0.0215 (16)* | 0.484 (7) |
H5B | 0.9903 | −0.1226 | 0.2750 | 0.026* | 0.484 (7) |
C6B | 0.8942 (4) | −0.0756 (12) | 0.3492 (3) | 0.0191 (17)* | 0.484 (7) |
H6B | 0.8514 | −0.1900 | 0.3264 | 0.023* | 0.484 (7) |
S1 | 0.76759 (3) | 0.02277 (10) | 0.45066 (3) | 0.0195 (3) | |
O3 | 1.12308 (11) | 0.1523 (3) | 0.32071 (9) | 0.0257 (4) | |
O1 | 0.77618 (12) | 0.1184 (3) | 0.52696 (8) | 0.0288 (4) | |
O2 | 0.73662 (11) | −0.2332 (3) | 0.43553 (9) | 0.0239 (4) | |
N1 | 0.69436 (13) | 0.2136 (3) | 0.40319 (10) | 0.0209 (5) | |
C10 | 0.60286 (15) | 0.1132 (4) | 0.16969 (13) | 0.0233 (5) | |
C7 | 0.66683 (14) | 0.1726 (4) | 0.32369 (12) | 0.0190 (5) | |
C11 | 0.66087 (17) | 0.3146 (5) | 0.19337 (13) | 0.0269 (5) | |
H11 | 0.6785 | 0.4311 | 0.1576 | 0.032* | |
C9 | 0.57863 (15) | −0.0581 (5) | 0.22474 (14) | 0.0251 (5) | |
H9 | 0.5409 | −0.1957 | 0.2099 | 0.030* | |
C14 | 1.18279 (18) | 0.3601 (5) | 0.34384 (17) | 0.0401 (7) | |
H14A | 1.1496 | 0.5177 | 0.3367 | 0.060* | |
H14B | 1.2345 | 0.3610 | 0.3137 | 0.060* | |
H14C | 1.2043 | 0.3410 | 0.3967 | 0.060* | |
C8 | 0.60898 (15) | −0.0295 (4) | 0.30080 (13) | 0.0219 (5) | |
H8 | 0.5908 | −0.1449 | 0.3366 | 0.026* | |
C12 | 0.69271 (16) | 0.3439 (4) | 0.26919 (12) | 0.0236 (5) | |
H12 | 0.7317 | 0.4791 | 0.2839 | 0.028* | |
C13 | 0.56880 (18) | 0.0780 (6) | 0.08674 (14) | 0.0363 (6) | |
H13A | 0.6139 | −0.0147 | 0.0614 | 0.054* | |
H13B | 0.5589 | 0.2417 | 0.0631 | 0.054* | |
H13C | 0.5119 | −0.0155 | 0.0831 | 0.054* |
U11 | U22 | U33 | U12 | U13 | U23 | |
C1 | 0.0253 (12) | 0.0218 (12) | 0.0201 (11) | −0.0001 (10) | 0.0032 (9) | −0.0043 (9) |
C4 | 0.0233 (11) | 0.0225 (12) | 0.0222 (11) | 0.0006 (9) | 0.0021 (9) | 0.0015 (9) |
S1 | 0.0239 (4) | 0.0169 (4) | 0.0181 (4) | −0.0004 (2) | 0.0046 (2) | −0.00107 (18) |
O3 | 0.0223 (8) | 0.0264 (9) | 0.0290 (8) | −0.0022 (7) | 0.0056 (7) | 0.0003 (7) |
O1 | 0.0336 (9) | 0.0348 (10) | 0.0187 (8) | 0.0010 (8) | 0.0062 (7) | −0.0046 (7) |
O2 | 0.0294 (9) | 0.0151 (8) | 0.0277 (8) | −0.0003 (7) | 0.0046 (7) | 0.0038 (6) |
N1 | 0.0286 (10) | 0.0129 (10) | 0.0220 (10) | 0.0015 (8) | 0.0061 (8) | −0.0028 (7) |
C10 | 0.0199 (11) | 0.0249 (13) | 0.0254 (12) | 0.0060 (9) | 0.0027 (9) | −0.0035 (9) |
C7 | 0.0186 (11) | 0.0154 (11) | 0.0236 (11) | 0.0038 (8) | 0.0046 (9) | −0.0017 (8) |
C11 | 0.0322 (13) | 0.0231 (12) | 0.0258 (12) | 0.0017 (10) | 0.0060 (10) | 0.0025 (9) |
C9 | 0.0187 (11) | 0.0223 (12) | 0.0339 (13) | −0.0017 (10) | 0.0008 (9) | −0.0041 (10) |
C14 | 0.0262 (13) | 0.0385 (15) | 0.0570 (18) | −0.0111 (12) | 0.0118 (12) | −0.0074 (13) |
C8 | 0.0177 (11) | 0.0179 (11) | 0.0305 (13) | −0.0004 (9) | 0.0042 (9) | 0.0032 (9) |
C12 | 0.0294 (12) | 0.0145 (11) | 0.0274 (12) | −0.0036 (9) | 0.0051 (9) | −0.0021 (9) |
C13 | 0.0329 (14) | 0.0476 (17) | 0.0281 (13) | 0.0003 (13) | 0.0019 (11) | −0.0059 (12) |
C1—C6A | 1.371 (5) | S1—O2 | 1.4340 (17) |
C1—C6B | 1.378 (5) | S1—N1 | 1.6360 (19) |
C1—C2B | 1.395 (5) | O3—C14 | 1.430 (3) |
C1—C2A | 1.415 (5) | N1—C7 | 1.437 (3) |
C1—S1 | 1.763 (2) | N1—H1 | 0.893 (10) |
C2A—C3A | 1.391 (5) | C10—C9 | 1.391 (3) |
C2A—H2A | 0.9300 | C10—C11 | 1.393 (3) |
C3A—C4 | 1.426 (5) | C10—C13 | 1.511 (3) |
C3A—H3A | 0.9300 | C7—C8 | 1.391 (3) |
C2B—C3B | 1.397 (6) | C7—C12 | 1.392 (3) |
C2B—H2B | 0.9300 | C11—C12 | 1.382 (3) |
C3B—C4 | 1.394 (5) | C11—H11 | 0.9300 |
C3B—H3B | 0.9300 | C9—C8 | 1.380 (3) |
C4—C5A | 1.358 (5) | C9—H9 | 0.9300 |
C4—O3 | 1.358 (3) | C14—H14A | 0.9600 |
C4—C5B | 1.395 (5) | C14—H14B | 0.9600 |
C5A—C6A | 1.385 (6) | C14—H14C | 0.9600 |
C5A—H5A | 0.9300 | C8—H8 | 0.9300 |
C6A—H6A | 0.9300 | C12—H12 | 0.9300 |
C5B—C6B | 1.385 (6) | C13—H13A | 0.9600 |
C5B—H5B | 0.9300 | C13—H13B | 0.9600 |
C6B—H6B | 0.9300 | C13—H13C | 0.9600 |
S1—O1 | 1.4291 (16) | ||
C6A—C1—C2B | 113.9 (3) | O1—S1—O2 | 120.18 (10) |
C6B—C1—C2B | 120.3 (3) | O1—S1—N1 | 105.25 (10) |
C6A—C1—C2A | 119.3 (3) | O2—S1—N1 | 107.39 (9) |
C6B—C1—C2A | 116.1 (3) | O1—S1—C1 | 107.99 (10) |
C6A—C1—S1 | 122.2 (3) | O2—S1—C1 | 107.66 (10) |
C6B—C1—S1 | 120.2 (3) | N1—S1—C1 | 107.83 (10) |
C2B—C1—S1 | 118.7 (2) | C4—O3—C14 | 117.83 (18) |
C2A—C1—S1 | 117.6 (2) | C7—N1—S1 | 121.15 (14) |
C3A—C2A—C1 | 119.8 (4) | C7—N1—H1 | 115.7 (17) |
C3A—C2A—H2A | 120.1 | S1—N1—H1 | 112.5 (18) |
C1—C2A—H2A | 120.1 | C9—C10—C11 | 117.8 (2) |
C2A—C3A—C4 | 118.1 (4) | C9—C10—C13 | 120.9 (2) |
C2A—C3A—H3A | 120.9 | C11—C10—C13 | 121.3 (2) |
C4—C3A—H3A | 120.9 | C8—C7—C12 | 119.2 (2) |
C1—C2B—C3B | 119.5 (4) | C8—C7—N1 | 120.31 (19) |
C1—C2B—H2B | 120.3 | C12—C7—N1 | 120.4 (2) |
C3B—C2B—H2B | 120.3 | C12—C11—C10 | 121.0 (2) |
C4—C3B—C2B | 119.4 (4) | C12—C11—H11 | 119.5 |
C4—C3B—H3B | 120.3 | C10—C11—H11 | 119.5 |
C2B—C3B—H3B | 120.3 | C8—C9—C10 | 121.8 (2) |
C5A—C4—O3 | 116.0 (3) | C8—C9—H9 | 119.1 |
C5A—C4—C3B | 114.4 (3) | C10—C9—H9 | 119.1 |
O3—C4—C3B | 124.1 (3) | O3—C14—H14A | 109.5 |
O3—C4—C5B | 116.0 (3) | O3—C14—H14B | 109.5 |
C3B—C4—C5B | 119.2 (3) | H14A—C14—H14B | 109.5 |
C5A—C4—C3A | 120.5 (3) | O3—C14—H14C | 109.5 |
O3—C4—C3A | 122.4 (2) | H14A—C14—H14C | 109.5 |
C5B—C4—C3A | 115.1 (3) | H14B—C14—H14C | 109.5 |
C4—C5A—C6A | 120.3 (4) | C9—C8—C7 | 119.8 (2) |
C4—C5A—H5A | 119.9 | C9—C8—H8 | 120.1 |
C6A—C5A—H5A | 119.9 | C7—C8—H8 | 120.1 |
C1—C6A—C5A | 120.6 (4) | C11—C12—C7 | 120.4 (2) |
C1—C6A—H6A | 119.7 | C11—C12—H12 | 119.8 |
C5A—C6A—H6A | 119.7 | C7—C12—H12 | 119.8 |
C6B—C5B—C4 | 120.7 (5) | C10—C13—H13A | 109.5 |
C6B—C5B—H5B | 119.7 | C10—C13—H13B | 109.5 |
C4—C5B—H5B | 119.7 | H13A—C13—H13B | 109.5 |
C1—C6B—C5B | 119.2 (5) | C10—C13—H13C | 109.5 |
C1—C6B—H6B | 120.4 | H13A—C13—H13C | 109.5 |
C5B—C6B—H6B | 120.4 | H13B—C13—H13C | 109.5 |
C6A—C1—C2A—C3A | −10.4 (6) | S1—C1—C6B—C5B | 177.4 (5) |
C6B—C1—C2A—C3A | −26.8 (6) | C4—C5B—C6B—C1 | 1.9 (9) |
C2B—C1—C2A—C3A | 79.3 (5) | C6A—C1—S1—O1 | 145.9 (4) |
S1—C1—C2A—C3A | −179.7 (3) | C6B—C1—S1—O1 | 163.2 (4) |
C1—C2A—C3A—C4 | 1.2 (6) | C2B—C1—S1—O1 | −7.0 (3) |
C6A—C1—C2B—C3B | 27.0 (6) | C2A—C1—S1—O1 | −45.0 (3) |
C6B—C1—C2B—C3B | 11.9 (6) | C6A—C1—S1—O2 | 14.8 (4) |
C2A—C1—C2B—C3B | −80.4 (5) | C6B—C1—S1—O2 | 32.1 (4) |
S1—C1—C2B—C3B | −177.9 (3) | C2B—C1—S1—O2 | −138.2 (3) |
C1—C2B—C3B—C4 | −0.6 (6) | C2A—C1—S1—O2 | −176.2 (3) |
C2B—C3B—C4—C5A | −27.1 (6) | C6A—C1—S1—N1 | −100.8 (4) |
C2B—C3B—C4—O3 | −179.6 (3) | C6B—C1—S1—N1 | −83.5 (4) |
C2B—C3B—C4—C5B | −9.8 (6) | C2B—C1—S1—N1 | 106.3 (3) |
C2B—C3B—C4—C3A | 82.0 (6) | C2A—C1—S1—N1 | 68.2 (3) |
C2A—C3A—C4—C5A | 8.2 (6) | C5A—C4—O3—C14 | −176.2 (4) |
C2A—C3A—C4—O3 | 176.2 (3) | C3B—C4—O3—C14 | −24.1 (4) |
C2A—C3A—C4—C3B | −80.1 (6) | C5B—C4—O3—C14 | 165.9 (4) |
C2A—C3A—C4—C5B | 25.4 (6) | C3A—C4—O3—C14 | 15.3 (4) |
O3—C4—C5A—C6A | −177.0 (4) | O1—S1—N1—C7 | −178.58 (16) |
C3B—C4—C5A—C6A | 28.1 (7) | O2—S1—N1—C7 | −49.43 (18) |
C5B—C4—C5A—C6A | −82.9 (14) | C1—S1—N1—C7 | 66.33 (19) |
C3A—C4—C5A—C6A | −8.3 (7) | S1—N1—C7—C8 | 71.9 (2) |
C6B—C1—C6A—C5A | 92.3 (16) | S1—N1—C7—C12 | −112.4 (2) |
C2B—C1—C6A—C5A | −26.5 (7) | C9—C10—C11—C12 | −0.5 (3) |
C2A—C1—C6A—C5A | 10.5 (7) | C13—C10—C11—C12 | −179.2 (2) |
S1—C1—C6A—C5A | 179.3 (4) | C11—C10—C9—C8 | 1.3 (3) |
C4—C5A—C6A—C1 | −1.2 (8) | C13—C10—C9—C8 | 180.0 (2) |
C5A—C4—C5B—C6B | 86.0 (14) | C10—C9—C8—C7 | −1.2 (3) |
O3—C4—C5B—C6B | 179.8 (5) | C12—C7—C8—C9 | 0.4 (3) |
C3B—C4—C5B—C6B | 9.2 (8) | N1—C7—C8—C9 | 176.2 (2) |
C3A—C4—C5B—C6B | −27.4 (7) | C10—C11—C12—C7 | −0.3 (3) |
C6A—C1—C6B—C5B | −80.7 (16) | C8—C7—C12—C11 | 0.4 (3) |
C2B—C1—C6B—C5B | −12.5 (8) | N1—C7—C12—C11 | −175.4 (2) |
C2A—C1—C6B—C5B | 25.2 (8) |
Cg is the centroid of the C7–C12 ring. |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1···O2i | 0.89 (1) | 2.13 (1) | 3.010 (2) | 170 (2) |
C14—H14B···Cgii | 0.96 | 2.70 | 3.541 (2) | 146 |
C9—H9···Cgiii | 0.93 | 2.87 | 3.560 (2) | 132 |
Symmetry codes: (i) x, y+1, z; (ii) −x, y+1/2, −z+1/2; (iii) −x+1, y−1/2, −z+1/2. |
C13H12FNO3S | Prism |
Mr = 281.30 | Dx = 1.473 Mg m−3 |
Orthorhombic, Pna21 | Cu Kα radiation, λ = 1.54178 Å |
Hall symbol: P 2c -2n | Cell parameters from 143 reflections |
a = 20.2188 (13) Å | θ = 4.3–64.1° |
b = 12.1199 (8) Å | µ = 2.44 mm−1 |
c = 5.1770 (3) Å | T = 296 K |
V = 1268.62 (14) Å3 | Prism, colourless |
Z = 4 | 0.32 × 0.27 × 0.22 mm |
F(000) = 584 |
Bruker APEXII diffractometer | 1784 reflections with I > 2σ(I) |
Radiation source: fine-focus sealed tube | Rint = 0.037 |
Graphite monochromator | θmax = 64.1°, θmin = 4.3° |
phi and φ scans | h = −22→23 |
Absorption correction: multi-scan (SADABS; Bruker, 2009) | k = −13→14 |
Tmin = 0.481, Tmax = 0.585 | l = −5→5 |
5438 measured reflections | 1 standard reflections every 1 reflections |
1830 independent reflections | intensity decay: 0.1% |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.034 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.100 | w = 1/[σ2(Fo2) + (0.0719P)2] where P = (Fo2 + 2Fc2)/3 |
S = 1.09 | (Δ/σ)max = 0.001 |
1830 reflections | Δρmax = 0.30 e Å−3 |
177 parameters | Δρmin = −0.35 e Å−3 |
2 restraints | Absolute structure: Flack (1983), 973 Friedel pairs |
Primary atom site location: structure-invariant direct methods | Absolute structure parameter: 0.08 (2) |
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
S1 | 0.77164 (2) | 0.42206 (4) | 0.40154 (13) | 0.0172 (2) | |
F1 | 0.96703 (8) | −0.00461 (12) | 0.4446 (3) | 0.0328 (4) | |
O1 | 0.75213 (8) | 0.53031 (14) | 0.4790 (4) | 0.0229 (4) | |
O2 | 0.79392 (9) | 0.40209 (15) | 0.1426 (4) | 0.0234 (4) | |
O3 | 0.56267 (8) | 0.10112 (16) | 0.6458 (4) | 0.0289 (5) | |
N1 | 0.83314 (9) | 0.38833 (18) | 0.5945 (4) | 0.0179 (5) | |
C10 | 0.93385 (12) | 0.0915 (2) | 0.4822 (6) | 0.0245 (6) | |
C6 | 0.70105 (11) | 0.2317 (2) | 0.3318 (5) | 0.0224 (6) | |
H6 | 0.7303 | 0.2162 | 0.1979 | 0.027* | |
C8 | 0.85326 (11) | 0.1947 (2) | 0.7108 (5) | 0.0229 (6) | |
H8 | 0.8215 | 0.2003 | 0.8401 | 0.028* | |
C7 | 0.86643 (11) | 0.2844 (2) | 0.5534 (5) | 0.0181 (5) | |
C4 | 0.60893 (10) | 0.1812 (2) | 0.5970 (6) | 0.0216 (6) | |
C2 | 0.66316 (11) | 0.3540 (2) | 0.6686 (6) | 0.0221 (5) | |
H2 | 0.6672 | 0.4199 | 0.7591 | 0.027* | |
C5 | 0.65224 (10) | 0.15819 (19) | 0.3967 (6) | 0.0234 (5) | |
H5 | 0.6482 | 0.0924 | 0.3056 | 0.028* | |
C11 | 0.94793 (12) | 0.1792 (2) | 0.3219 (6) | 0.0277 (6) | |
H11 | 0.9794 | 0.1731 | 0.1917 | 0.033* | |
C12 | 0.91355 (11) | 0.2773 (2) | 0.3611 (5) | 0.0240 (6) | |
H12 | 0.9224 | 0.3382 | 0.2575 | 0.029* | |
C3 | 0.61372 (11) | 0.2795 (2) | 0.7337 (5) | 0.0234 (6) | |
H3 | 0.5843 | 0.2952 | 0.8667 | 0.028* | |
C1 | 0.70619 (12) | 0.3303 (2) | 0.4696 (5) | 0.0186 (5) | |
C13 | 0.51905 (13) | 0.1183 (2) | 0.8577 (6) | 0.0330 (7) | |
H13A | 0.5443 | 0.1268 | 1.0134 | 0.049* | |
H13B | 0.4901 | 0.0560 | 0.8745 | 0.049* | |
H13C | 0.4933 | 0.1837 | 0.8281 | 0.049* | |
C9 | 0.88759 (13) | 0.0962 (2) | 0.6755 (6) | 0.0261 (6) | |
H9 | 0.8794 | 0.0353 | 0.7801 | 0.031* | |
H1 | 0.8245 (14) | 0.399 (2) | 0.763 (2) | 0.023 (8)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
S1 | 0.0222 (3) | 0.0161 (3) | 0.0134 (3) | −0.0004 (2) | −0.0004 (2) | −0.0003 (2) |
F1 | 0.0403 (8) | 0.0248 (8) | 0.0333 (10) | 0.0127 (6) | 0.0008 (8) | −0.0014 (8) |
O1 | 0.0286 (8) | 0.0160 (9) | 0.0241 (10) | 0.0003 (7) | −0.0029 (7) | −0.0009 (7) |
O2 | 0.0280 (9) | 0.0249 (10) | 0.0172 (10) | −0.0017 (8) | 0.0010 (8) | −0.0009 (8) |
O3 | 0.0258 (9) | 0.0260 (10) | 0.0349 (13) | −0.0065 (8) | 0.0066 (9) | −0.0040 (9) |
N1 | 0.0228 (9) | 0.0193 (11) | 0.0117 (11) | −0.0006 (8) | 0.0019 (9) | −0.0019 (9) |
C10 | 0.0262 (12) | 0.0222 (14) | 0.0251 (15) | 0.0056 (11) | −0.0031 (11) | −0.0029 (11) |
C6 | 0.0239 (11) | 0.0208 (13) | 0.0225 (15) | 0.0030 (10) | 0.0038 (10) | −0.0064 (11) |
C8 | 0.0221 (10) | 0.0265 (15) | 0.0202 (14) | 0.0010 (10) | 0.0050 (10) | 0.0016 (11) |
C7 | 0.0202 (11) | 0.0186 (13) | 0.0155 (13) | −0.0019 (10) | −0.0016 (9) | −0.0015 (10) |
C4 | 0.0201 (11) | 0.0181 (13) | 0.0265 (14) | −0.0009 (9) | −0.0039 (11) | 0.0023 (11) |
C2 | 0.0268 (12) | 0.0202 (13) | 0.0193 (13) | −0.0003 (10) | −0.0019 (10) | −0.0052 (11) |
C5 | 0.0258 (11) | 0.0183 (12) | 0.0261 (14) | −0.0003 (9) | −0.0027 (11) | −0.0081 (13) |
C11 | 0.0279 (11) | 0.0306 (15) | 0.0246 (17) | 0.0054 (12) | 0.0065 (11) | −0.0005 (12) |
C12 | 0.0275 (11) | 0.0227 (12) | 0.0218 (14) | 0.0003 (10) | 0.0065 (11) | 0.0023 (11) |
C3 | 0.0234 (11) | 0.0268 (14) | 0.0201 (14) | −0.0002 (11) | 0.0034 (10) | −0.0032 (11) |
C1 | 0.0212 (11) | 0.0182 (12) | 0.0162 (12) | 0.0018 (10) | −0.0026 (9) | −0.0010 (10) |
C13 | 0.0272 (12) | 0.0401 (15) | 0.0316 (17) | −0.0092 (12) | 0.0027 (12) | 0.0013 (14) |
C9 | 0.0316 (13) | 0.0208 (14) | 0.0260 (16) | −0.0008 (11) | −0.0004 (12) | 0.0050 (12) |
S1—O1 | 1.4275 (18) | C8—H8 | 0.9300 |
S1—O2 | 1.435 (2) | C7—C12 | 1.380 (3) |
S1—N1 | 1.647 (2) | C4—C5 | 1.385 (4) |
S1—C1 | 1.764 (2) | C4—C3 | 1.390 (4) |
F1—C10 | 1.358 (3) | C2—C1 | 1.378 (4) |
O3—C4 | 1.371 (3) | C2—C3 | 1.388 (4) |
O3—C13 | 1.423 (3) | C2—H2 | 0.9300 |
N1—C7 | 1.444 (3) | C5—H5 | 0.9300 |
N1—H1 | 0.898 (10) | C11—C12 | 1.392 (4) |
C10—C9 | 1.371 (4) | C11—H11 | 0.9300 |
C10—C11 | 1.378 (4) | C12—H12 | 0.9300 |
C6—C5 | 1.372 (3) | C3—H3 | 0.9300 |
C6—C1 | 1.395 (3) | C13—H13A | 0.9600 |
C6—H6 | 0.9300 | C13—H13B | 0.9600 |
C8—C7 | 1.385 (4) | C13—H13C | 0.9600 |
C8—C9 | 1.394 (4) | C9—H9 | 0.9300 |
O1—S1—O2 | 120.28 (11) | C1—C2—H2 | 120.0 |
O1—S1—N1 | 105.44 (11) | C3—C2—H2 | 120.0 |
O2—S1—N1 | 106.74 (11) | C6—C5—C4 | 120.5 (2) |
O1—S1—C1 | 108.44 (11) | C6—C5—H5 | 119.8 |
O2—S1—C1 | 108.41 (11) | C4—C5—H5 | 119.8 |
N1—S1—C1 | 106.77 (11) | C10—C11—C12 | 117.9 (2) |
C4—O3—C13 | 117.5 (2) | C10—C11—H11 | 121.1 |
C7—N1—S1 | 118.62 (16) | C12—C11—H11 | 121.1 |
C7—N1—H1 | 111.3 (19) | C7—C12—C11 | 120.2 (2) |
S1—N1—H1 | 113.8 (19) | C7—C12—H12 | 119.9 |
F1—C10—C9 | 118.5 (2) | C11—C12—H12 | 119.9 |
F1—C10—C11 | 118.3 (2) | C2—C3—C4 | 118.9 (2) |
C9—C10—C11 | 123.3 (2) | C2—C3—H3 | 120.5 |
C5—C6—C1 | 119.0 (2) | C4—C3—H3 | 120.5 |
C5—C6—H6 | 120.5 | C2—C1—C6 | 120.9 (2) |
C1—C6—H6 | 120.5 | C2—C1—S1 | 119.40 (19) |
C7—C8—C9 | 120.0 (2) | C6—C1—S1 | 119.56 (19) |
C7—C8—H8 | 120.0 | O3—C13—H13A | 109.5 |
C9—C8—H8 | 120.0 | O3—C13—H13B | 109.5 |
C12—C7—C8 | 120.5 (2) | H13A—C13—H13B | 109.5 |
C12—C7—N1 | 118.9 (2) | O3—C13—H13C | 109.5 |
C8—C7—N1 | 120.5 (2) | H13A—C13—H13C | 109.5 |
O3—C4—C5 | 115.2 (2) | H13B—C13—H13C | 109.5 |
O3—C4—C3 | 124.1 (2) | C10—C9—C8 | 118.1 (3) |
C5—C4—C3 | 120.7 (2) | C10—C9—H9 | 121.0 |
C1—C2—C3 | 120.0 (2) | C8—C9—H9 | 121.0 |
O1—S1—N1—C7 | −176.37 (18) | C1—C2—C3—C4 | 0.5 (4) |
O2—S1—N1—C7 | −47.4 (2) | O3—C4—C3—C2 | 179.3 (2) |
C1—S1—N1—C7 | 68.4 (2) | C5—C4—C3—C2 | −0.8 (4) |
C9—C8—C7—C12 | −0.1 (4) | C3—C2—C1—C6 | −0.2 (4) |
C9—C8—C7—N1 | −177.5 (2) | C3—C2—C1—S1 | −176.4 (2) |
S1—N1—C7—C12 | 80.1 (3) | C5—C6—C1—C2 | 0.1 (4) |
S1—N1—C7—C8 | −102.5 (2) | C5—C6—C1—S1 | 176.26 (19) |
C13—O3—C4—C5 | 177.0 (2) | O1—S1—C1—C2 | −27.8 (2) |
C13—O3—C4—C3 | −3.0 (4) | O2—S1—C1—C2 | −159.9 (2) |
C1—C6—C5—C4 | −0.3 (4) | N1—S1—C1—C2 | 85.4 (2) |
O3—C4—C5—C6 | −179.4 (2) | O1—S1—C1—C6 | 156.0 (2) |
C3—C4—C5—C6 | 0.7 (4) | O2—S1—C1—C6 | 23.8 (2) |
F1—C10—C11—C12 | 179.8 (2) | N1—S1—C1—C6 | −90.8 (2) |
C9—C10—C11—C12 | 0.5 (4) | F1—C10—C9—C8 | −179.3 (2) |
C8—C7—C12—C11 | 0.6 (4) | C11—C10—C9—C8 | 0.0 (4) |
N1—C7—C12—C11 | 178.0 (2) | C7—C8—C9—C10 | −0.2 (4) |
C10—C11—C12—C7 | −0.8 (4) |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1···O2i | 0.90 (1) | 2.06 (1) | 2.951 (3) | 171 (3) |
C6—H6···O1ii | 0.93 | 2.55 | 3.192 (3) | 127 |
C13—H13B···O3iii | 0.96 | 2.60 | 3.468 (3) | 151 |
Symmetry codes: (i) x, y, z+1; (ii) −x+3/2, y−1/2, z−1/2; (iii) −x+1, −y, z+1/2. |
Footnotes
‡These authors contributed equally
Acknowledgements
The authors are thankful to the Institution of Excellence, Vijnana Bhavana, University of Mysore, Mysuru, for providing the single-crystal X-ray diffraction facility. VZR is thankful to the University Grants Commission, Delhi, for the financial assistance under its MRP scheme.
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