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Journal logoCRYSTALLOGRAPHIC
COMMUNICATIONS
ISSN: 2056-9890
Volume 72| Part 2| February 2016| Pages 151-154

Crystal structure of catena-poly[[[trans-bis­(aceto­nitrile-κN)di­aquacobalt(II)]-μ-pyrazine-κ2N:N′] dinitrate]

CROSSMARK_Color_square_no_text.svg

aDepartment of Chemistry and Environmental Science, Grenfell Campus, Memorial University of Newfoundland, Corner Brook, NL, A2H 5G4, Canada, and bDepartment of Chemistry, University of Florida, Gainesville, FL, 32611-7200, USA
*Correspondence e-mail: cliu@grenfell.mun.ca

Edited by M. Weil, Vienna University of Technology, Austria (Received 31 December 2015; accepted 5 January 2016; online 13 January 2016)

The central structural motif of the title coordination polymer, [Co(NO3)2(C4H4N2)(CH3CN)2(H2O)2]n, is a chain composed of CoII ions linked by bis-monodentate bridging pyrazine ligands through their N atoms. The CoII ion is located on an inversion center and is additionally coordinated by two O atoms of water mol­ecules and two N atoms of aceto­nitrile mol­ecules. The resultant N4O2 coordination sphere is distorted octa­hedral. The linear cationic chains extend parallel to the a axis and are aligned into layers parallel to the ac plane. Nitrate anions are situated in the space between the CoII chains and form O—H⋯O hydrogen bonds with the coordinating water mol­ecules, leading to a three-dimensional network structure. Weak C—H⋯O hydrogen bonds are also present between pyrazine or aceto­nitrile mol­ecules and the nitrate anions.

1. Chemical context

In the design of coordination polymers, the choice of bridging ligands between metal atoms plays an important role in the formation of the final structure and the resulting properties. During our investigations of the preparation conditions and magnetic properties of compounds with ladder-like structures, we have used pyrazine as a bis-monodentate bridging ligand to link paramagnetic metal cations. From the point of view of mediating magnetic inter­actions, the pyrazine mol­ecule offers some advantages compared to other bidentate bridging ligands such as 4,4′-bi­pyridine. In some of the structures with the latter ligand, the two pyridine rings are not co-planar and therefore can magnetically isolate metal atoms (Losier & Zaworotko, 1996[Losier, P. & Zaworotko, M. J. (1996). Angew. Chem. Int. Ed. Engl. 35, 2779-2782.]; Ruan et al., 2009[Ruan, M.-B., Deng, J.-C., Li, Z.-G. & Xu, J.-W. (2009). Acta Cryst. E65, m743.]; Seidel et al., 2011[Seidel, R. W., Goddard, R., Zibrowius, B. & Oppel, I. M. (2011). Polymers, 3, 1458-1474.]; Lehleh et al., 2013[Lehleh, A., Boutebdja, M., Beghidja, A., Beghidja, C. & Merazig, H. (2013). Acta Cryst. E69, m177-m178.]).

[Scheme 1]

We herein report the preparation and structure of a pyrazine-bridged chain structure obtained by reacting pyrazine and cobalt(II) nitrate hexa­hydrate using aceto­nitrile as the solvent.

2. Structural commentary

The asymmetric unit of the title compound, [Co(C4H4N2)(CH3CN)2(H2O)2(NO3)2]n, contains one CoII cation located on an inversion center, one water mol­ecule, one aceto­nitrile mol­ecule, one nitrate anion, and one half of a pyrazine mol­ecule, the latter being completed by inversion symmetry. The CoII cation exhibits an N4O2 coordination set defined by two O atoms [O1, O1ii; symmetry code: (ii) −3 − x, 1 − y, −z] of two coordinating water mol­ecules, two N atoms (N2, N2ii) of two coordinating aceto­nitrile mol­ecules, and two nitro­gen atoms (N1, N1ii) of two bridging pyrazine mol­ecules (Fig. 1[link]). The two Co—Owater bonds have a length of 2.0315 (8) Å, considerably shorter than the two Co—Naceto­nitrile bonds of 2.1263 (9) Å, and the two Co—Npyrazine bonds of 2.1493 (10) Å. The resulting coordination sphere is compressed octa­hedral with all bond lengths in good agreement with similar structures (Choudhury et al., 2002[Choudhury, C. R., Dey, S. K., Sen, S., Bag, B., Mitra, S. & Gramlich, V. (2002). Z. Naturforsch. Teil B, 57, 1191-1194.]; Holman et al., 2005[Holman, K. T., Hammud, H. H., Isber, S. & Tabbal, M. (2005). Polyhedron, 24, 221-228.]; Aşkin et al., 2015[Aşkın, G. Ş., Çelik, F., Dilek, N., Necefoğlu, H. & Hökelek, T. (2015). Acta Cryst. E71, 339-341.]). In contrast to the N2O4 coordination spheres observed more frequently in the structures of other Co-containing compounds (Choudhury et al., 2002[Choudhury, C. R., Dey, S. K., Sen, S., Bag, B., Mitra, S. & Gramlich, V. (2002). Z. Naturforsch. Teil B, 57, 1191-1194.]; Holman et al., 2005[Holman, K. T., Hammud, H. H., Isber, S. & Tabbal, M. (2005). Polyhedron, 24, 221-228.]; Hyun et al., 2011[Hyun, M. Y., Kim, P.-G., Kim, C. & Kim, Y. (2011). Acta Cryst. E67, m390.]; Aşkin et al., 2015[Aşkın, G. Ş., Çelik, F., Dilek, N., Necefoğlu, H. & Hökelek, T. (2015). Acta Cryst. E71, 339-341.]), the title structure exhibits an N4O2 coordination sphere due to the inclusion of the solvent aceto­nitrile mol­ecules in the coordination sphere of CoII. The bridging bis-monodentate pyrazine mol­ecules link the CoII ions, forming linear chains extending parallel to the a axis. The distance between two symmetry-related CoII ions within a chain (symmetry code: 1 + x, y, z) is 7.0798 (3) Å, in good agreement with those reported for similar structures (Choudhury et al., 2002[Choudhury, C. R., Dey, S. K., Sen, S., Bag, B., Mitra, S. & Gramlich, V. (2002). Z. Naturforsch. Teil B, 57, 1191-1194.]; Holman et al., 2005[Holman, K. T., Hammud, H. H., Isber, S. & Tabbal, M. (2005). Polyhedron, 24, 221-228.]; Aşkin et al., 2015[Aşkın, G. Ş., Çelik, F., Dilek, N., Necefoğlu, H. & Hökelek, T. (2015). Acta Cryst. E71, 339-341.]).

[Figure 1]
Figure 1
A fragment of the one-dimensional chain structure of the title compound with displacement ellipsoids drawn at the 50% probability level. [Symmetry codes: (i) 1 + x, y, z; (ii) −3 − x, 1 − y, −z; (iii) −4 − x, 1 − y, −z.]

3. Supra­molecular features

In the crystal, the cationic chains are arranged to form sheets parallel to the ac plane, and neighboring sheets are related by a glide plane. Nitrate ions are sandwiched in the space between the sheets and form columns parallel to the a axis. Each CoII chain is surrounded by six columns of nitrate ions that are related by the inversion centers located along the cationic chains. Each cationic chain is further surrounded by six other chains. This structural motif with alternating layers has been observed in similar structures (Choudhury et al., 2002[Choudhury, C. R., Dey, S. K., Sen, S., Bag, B., Mitra, S. & Gramlich, V. (2002). Z. Naturforsch. Teil B, 57, 1191-1194.]; Yang et al., 2003[Yang, S.-Y., Long, L.-S., Huang, R.-B., Zheng, L.-S. & Ng, S. W. (2003). Acta Cryst. E59, m961-m963.]; Holman et al., 2005[Holman, K. T., Hammud, H. H., Isber, S. & Tabbal, M. (2005). Polyhedron, 24, 221-228.]; Aşkin et al., 2015[Aşkın, G. Ş., Çelik, F., Dilek, N., Necefoğlu, H. & Hökelek, T. (2015). Acta Cryst. E71, 339-341.]). CoII chains in neighboring sheets inter­act through nitrate ions by forming O—H⋯O hydrogen bonds where the donor O—H groups are provided by the coordinating water mol­ecules and the acceptor oxygen provided by the nitrate ions. One of those hydrogen bonds is bifurcated. For numerical values and symmetry operators, see Table 1[link]. Weak C—H⋯O hydrogen bonds are also present between the C—H groups of bridging pyrazine and coordinating aceto­nitrile mol­ecules, and the oxygen atoms of nitrate ions, linking CoII chains both within the same sheet and to adjacent sheets (Table 1[link], Fig. 2[link]).

Table 1
Hydrogen-bond geometry (Å, °)

D—H⋯A D—H H⋯A DA D—H⋯A
O1—H1Y⋯O13i 0.83 (2) 1.85 (2) 2.6819 (12) 173.5 (18)
O1—H1X⋯O12ii 0.80 (2) 1.99 (2) 2.7869 (12) 174.1 (19)
O1—H1X⋯O13ii 0.80 (2) 2.562 (19) 3.0912 (12) 125.3 (17)
C1—H1A⋯O11iii 0.95 2.54 3.1572 (14) 123
C2—H2A⋯O13iv 0.95 2.59 3.4644 (14) 153
C4—H4A⋯O13v 0.98 2.49 3.2785 (17) 138
C4—H4B⋯O11vi 0.98 2.49 3.2823 (17) 138
Symmetry codes: (i) [x, -y+{\script{1\over 2}}, z-{\script{1\over 2}}]; (ii) x, y, z-1; (iii) -x, -y+1, -z; (iv) [-x, y+{\script{1\over 2}}, -z+{\script{1\over 2}}]; (v) -x+1, -y+1, -z; (vi) [-x, y+{\script{1\over 2}}, -z-{\script{1\over 2}}].
[Figure 2]
Figure 2
Crystal packing of the title compound, showing hydrogen bonds as dashed lines.

4. Synthesis and crystallization

The title compound was obtained by a slow diffusion method in an U-shaped glass tube. The tube was first partially filled with aceto­nitrile. An aceto­nitrile solution of 0.333 mmol (97.0 mg) of Co(NO3)2·6H2O was then placed in one arm of the tube. Another aceto­nitrile solution of 0.500 mmol (40.0 mg) of pyrazine was placed in the other arm of the tube. The slow diffusion of the two solutions in the tube produced pink needle–shaped crystals within one day. The crystals were collected by filtration and washed with fresh aceto­nitrile and kept under inert atmosphere (yield 31.5%). Selected IR bands (KBr, cm−1): 3273 (O—H), 2283 (C≡N), 1633, 1413, 1384 (N=O), 479 (bridging pyrazine).

5. Refinement details

Crystal data, data collection and structure refinement details are summarized in Table 2[link]. C-bound H atoms were calculated in geometrically idealized positions and refined riding on their parent atoms, with Uiso(H) = 1.2Ueq(C) (aromatic) and 1.5Ueq(C) (meth­yl), and with C—H = 0.95 Å (aromatic) and 0.98 Å (meth­yl). The methyl H atoms were allowed to rotate around the corresponding C—C bond. H atoms bound to water mol­ecules were found in a difference map and were freely refined.

Table 2
Experimental details

Crystal data
Chemical formula [Co(NO3)2(C4H4N2)(C2H3N)2(H2O)2]
Mr 381.18
Crystal system, space group Monoclinic, P21/c
Temperature (K) 100
a, b, c (Å) 7.0798 (3), 15.0376 (6), 7.9329 (3)
β (°) 110.8803 (6)
V3) 789.10 (5)
Z 2
Radiation type Mo Kα
μ (mm−1) 1.14
Crystal size (mm) 0.29 × 0.11 × 0.08
 
Data collection
Diffractometer Bruker APEXII DUO CCD
Absorption correction Analytical based on measured indexed crystal faces using SHELXTL2014 (Sheldrick, 2015b[Sheldrick, G. M. (2015b). Acta Cryst. C71, 3-8.])
Tmin, Tmax 0.735, 0.904
No. of measured, independent and observed [I > 2σ(I)] reflections 21292, 1811, 1687
Rint 0.022
(sin θ/λ)max−1) 0.650
 
Refinement
R[F2 > 2σ(F2)], wR(F2), S 0.019, 0.055, 1.07
No. of reflections 1811
No. of parameters 115
H-atom treatment H atoms treated by a mixture of independent and constrained refinement
Δρmax, Δρmin (e Å−3) 0.34, −0.31
Computer programs: APEX2 and SAINT (Bruker, 2014[Bruker (2014). APEX2 and SAINT. Bruker AXS Inc., Madison, Wisconsin, USA.]), SHELXLT (Sheldrick, 2015a[Sheldrick, G. M. (2015a). Acta Cryst. A71, 3-8.]), SHELXL2014/7 (Sheldrick, 2015b[Sheldrick, G. M. (2015b). Acta Cryst. C71, 3-8.]), XP in SHELXTL-Plus (Sheldrick, 2008[Sheldrick, G. M. (2008). Acta Cryst. A64, 112-122.]), ORTEP-3 for Windows (Farrugia, 2012[Farrugia, L. J. (2012). J. Appl. Cryst. 45, 849-854.]) and publCIF (Westrip, 2010[Westrip, S. P. (2010). J. Appl. Cryst. 43, 920-925.]).

Supporting information


Chemical context top

In the design of coordination polymers, the choice of bridging ligands between metal atoms plays an important role in the formation of the final structure and the resulting properties. During our investigations of the preparation conditions and magnetic properties of compounds with ladder-like structures, we have used pyrazine as a bis-monodentate bridging ligand to link paramagnetic metal cations. From the point of view of mediating magnetic inter­actions, the pyrazine molecule offers some advantages compared to other bidentate bridging ligands such as 4,4'-bi­pyridine. In some of the structures with the latter ligand, the two pyridine rings are not co-planar and therefore can magnetically isolate metal atoms (Losier & Zaworotko, 1996; Ruan et al., 2009; Seidel et al., 2011; Lehleh et al., 2013).

We herein report the preparation and structure of a pyrazine-bridged chain structure obtained by reacting pyrazine and cobalt(II) nitrate hexahydrate using aceto­nitrile as the solvent.

Structural commentary top

The asymmetric unit of the title compound, [Co(C4H4N2)(CH3CN)2(H2O)2(NO3)2]n, contains one CoII cation located on an inversion center, one water molecule, one aceto­nitrile molecule, one nitrate anion, and one half of a pyrazine molecule, the latter being completed by inversion symmetry. The CoII cation exhibits an N4O2 coordination set defined by two O atoms [O1, O1ii; symmetry code: (ii) –3 – x, 1 – y, –z] of two coordinating water molecules, two N atoms (N2, N2ii) of two coordinating aceto­nitrile molecules, and two nitro­gen atoms (N1, N1ii) of two bridging pyrazine molecules (Fig. 1). The two Co—Owater bonds have a length of 2.0315 (8) Å, considerably shorter than the two Co—Naceto­nitrile bonds of 2.1263 (9) Å, and the two Co—Npyrazine bonds of 2.1493 (10) Å. The resulting coordination sphere is compressed o­cta­hedral with all bond lengths in good agreement with similar structures (Choudhury et al., 2002; Holman et al., 2005; Aşkin et al., 2015). In contrast to the N2O4 coordination spheres observed more frequently in the structures of other Co-containing compounds (Choudhury et al., 2002; Holman et al., 2005; Hyun et al., 2011; Aşkin et al., 2015), the title structure exhibits an N4O2 coordination sphere due to the inclusion of the solvent aceto­nitrile molecules in the coordination sphere of CoII. The bridging bis-monodentate pyrazine molecules link the CoII ions, forming linear chains extending parallel to the a axis. The distance between two symmetry-related CoII ions within a chain (symmetry code: 1 + x, y, z) is 7.0798 (3) Å, in good agreement with those reported for similar structures (Choudhury et al., 2002; Holman et al., 2005; Aşkin et al., 2015).

Supra­molecular features top

In the crystal, the cationic chains are arranged to form sheets parallel to the ac plane, and neighboring sheets are related by a glide plane. Nitrate ions are sandwiched in the space between the sheets and form columns parallel to the a axis. Each CoII chain is surrounded by six columns of nitrate ions that are related by the inversion centers located along the cationic chains. Each cationic chain is further surrounded by six other chains. This structural motif with alternating layers has been observed in similar structures (Choudhury et al., 2002; Yang et al., 2003; Holman et al., 2005; Aşkin et al., 2015). CoII chains in neighboring sheets inter­act through nitrate ions by forming O—H···O hydrogen bonds where the donor O—H groups are provided by the coordinating water molecules and the acceptor oxygen provided by the nitrate ions. One of those hydrogen bonds is bifurcated. For numerical values and symmetry operators, see Table 1. Weak C—H···O hydrogen bonds are also present between the C—H groups of bridging pyrazine and coordinating aceto­nitrile molecules, and the oxygen atoms of nitrate ions, linking CoII chains both within the same sheet and to adjacent sheets (Table 1, Fig. 2).

Synthesis and crystallization top

The title compound was obtained by a slow diffusion method in an U-shaped glass tube. The tube was first partially filled with aceto­nitrile. An aceto­nitrile solution of 0.333 mmol (97.0 mg) of Co(NO3)2·6H2O was then placed in one arm of the tube. Another aceto­nitrile solution of 0.500 mmol (40.0 mg) of pyrazine was placed in the other arm of the tube. The slow diffusion of the two solutions in the tube produced pink needle–shaped crystals within one day. The crystals were collected by filtration and washed with fresh aceto­nitrile and kept under inert atmosphere (yield 31.5%). Selected IR bands (KBr, cm–1): 3273 (O—H), 2283 (CN), 1633, 1413, 1384 (NO), 479 (bridging pyrazine).

Refinement details top

Crystal data, data collection and structure refinement details are summarized in Table 2. C-bound H atoms were calculated in geometrically idealized positions and refined riding on their parent atoms, with Uiso(H) = 1.2Ueq(C) (aromatic) and 1.5Ueq(C) (methyl), and with C—H = 0.95 Å (aromatic) and 0.98 Å (methyl). The methyl H atoms were allowed to rotate around the corresponding C—C bond. H atoms bound to water molecules were found in a difference map and were freely refined.

Structure description top

In the design of coordination polymers, the choice of bridging ligands between metal atoms plays an important role in the formation of the final structure and the resulting properties. During our investigations of the preparation conditions and magnetic properties of compounds with ladder-like structures, we have used pyrazine as a bis-monodentate bridging ligand to link paramagnetic metal cations. From the point of view of mediating magnetic inter­actions, the pyrazine molecule offers some advantages compared to other bidentate bridging ligands such as 4,4'-bi­pyridine. In some of the structures with the latter ligand, the two pyridine rings are not co-planar and therefore can magnetically isolate metal atoms (Losier & Zaworotko, 1996; Ruan et al., 2009; Seidel et al., 2011; Lehleh et al., 2013).

We herein report the preparation and structure of a pyrazine-bridged chain structure obtained by reacting pyrazine and cobalt(II) nitrate hexahydrate using aceto­nitrile as the solvent.

The asymmetric unit of the title compound, [Co(C4H4N2)(CH3CN)2(H2O)2(NO3)2]n, contains one CoII cation located on an inversion center, one water molecule, one aceto­nitrile molecule, one nitrate anion, and one half of a pyrazine molecule, the latter being completed by inversion symmetry. The CoII cation exhibits an N4O2 coordination set defined by two O atoms [O1, O1ii; symmetry code: (ii) –3 – x, 1 – y, –z] of two coordinating water molecules, two N atoms (N2, N2ii) of two coordinating aceto­nitrile molecules, and two nitro­gen atoms (N1, N1ii) of two bridging pyrazine molecules (Fig. 1). The two Co—Owater bonds have a length of 2.0315 (8) Å, considerably shorter than the two Co—Naceto­nitrile bonds of 2.1263 (9) Å, and the two Co—Npyrazine bonds of 2.1493 (10) Å. The resulting coordination sphere is compressed o­cta­hedral with all bond lengths in good agreement with similar structures (Choudhury et al., 2002; Holman et al., 2005; Aşkin et al., 2015). In contrast to the N2O4 coordination spheres observed more frequently in the structures of other Co-containing compounds (Choudhury et al., 2002; Holman et al., 2005; Hyun et al., 2011; Aşkin et al., 2015), the title structure exhibits an N4O2 coordination sphere due to the inclusion of the solvent aceto­nitrile molecules in the coordination sphere of CoII. The bridging bis-monodentate pyrazine molecules link the CoII ions, forming linear chains extending parallel to the a axis. The distance between two symmetry-related CoII ions within a chain (symmetry code: 1 + x, y, z) is 7.0798 (3) Å, in good agreement with those reported for similar structures (Choudhury et al., 2002; Holman et al., 2005; Aşkin et al., 2015).

In the crystal, the cationic chains are arranged to form sheets parallel to the ac plane, and neighboring sheets are related by a glide plane. Nitrate ions are sandwiched in the space between the sheets and form columns parallel to the a axis. Each CoII chain is surrounded by six columns of nitrate ions that are related by the inversion centers located along the cationic chains. Each cationic chain is further surrounded by six other chains. This structural motif with alternating layers has been observed in similar structures (Choudhury et al., 2002; Yang et al., 2003; Holman et al., 2005; Aşkin et al., 2015). CoII chains in neighboring sheets inter­act through nitrate ions by forming O—H···O hydrogen bonds where the donor O—H groups are provided by the coordinating water molecules and the acceptor oxygen provided by the nitrate ions. One of those hydrogen bonds is bifurcated. For numerical values and symmetry operators, see Table 1. Weak C—H···O hydrogen bonds are also present between the C—H groups of bridging pyrazine and coordinating aceto­nitrile molecules, and the oxygen atoms of nitrate ions, linking CoII chains both within the same sheet and to adjacent sheets (Table 1, Fig. 2).

Synthesis and crystallization top

The title compound was obtained by a slow diffusion method in an U-shaped glass tube. The tube was first partially filled with aceto­nitrile. An aceto­nitrile solution of 0.333 mmol (97.0 mg) of Co(NO3)2·6H2O was then placed in one arm of the tube. Another aceto­nitrile solution of 0.500 mmol (40.0 mg) of pyrazine was placed in the other arm of the tube. The slow diffusion of the two solutions in the tube produced pink needle–shaped crystals within one day. The crystals were collected by filtration and washed with fresh aceto­nitrile and kept under inert atmosphere (yield 31.5%). Selected IR bands (KBr, cm–1): 3273 (O—H), 2283 (CN), 1633, 1413, 1384 (NO), 479 (bridging pyrazine).

Refinement details top

Crystal data, data collection and structure refinement details are summarized in Table 2. C-bound H atoms were calculated in geometrically idealized positions and refined riding on their parent atoms, with Uiso(H) = 1.2Ueq(C) (aromatic) and 1.5Ueq(C) (methyl), and with C—H = 0.95 Å (aromatic) and 0.98 Å (methyl). The methyl H atoms were allowed to rotate around the corresponding C—C bond. H atoms bound to water molecules were found in a difference map and were freely refined.

Computing details top

Data collection: APEX2 (Bruker, 2014); cell refinement: SAINT (Bruker, 2014); data reduction: SAINT (Bruker, 2014); program(s) used to solve structure: SHELXLT (Sheldrick, 2015a); program(s) used to refine structure: SHELXL2014/7 (Sheldrick, 2015b); molecular graphics: XP in SHELXTL-Plus (Sheldrick, 2008) and ORTEP-3 for Windows (Farrugia, 2012); software used to prepare material for publication: publCIF (Westrip, 2010).

Figures top
[Figure 1] Fig. 1. A fragment of the one-dimensional chain structure of the title compound with displacement ellipsoids drawn at the 50% probability level. [Symmetry codes: (i) 1 + x, y, z; (ii) -3 - x, 1 - y, -z; (iii) -4 - x, 1 - y, -z.]
[Figure 2] Fig. 2. Crystal packing of the title compound, showing hydrogen bonds as dashed lines.
catena-Poly[[[trans-bis(acetonitrile-κN)diaquacobalt(II)]-µ-pyrazine-κ2N:N'] dinitrate] top
Crystal data top
[Co(NO3)2(C4H4N2)(C2H3N)2(H2O)2]F(000) = 390
Mr = 381.18Dx = 1.604 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
a = 7.0798 (3) ÅCell parameters from 9896 reflections
b = 15.0376 (6) Åθ = 2.0–28.0°
c = 7.9329 (3) ŵ = 1.14 mm1
β = 110.8803 (6)°T = 100 K
V = 789.10 (5) Å3Needle, pink
Z = 20.29 × 0.11 × 0.08 mm
Data collection top
Bruker APEXII DUO CCD
diffractometer
1687 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.022
φ– and ω–scansθmax = 27.5°, θmin = 2.7°
Absorption correction: analytical
based on measured indexed crystal faces using SHELXTL2014 (Sheldrick, 2015b)
h = 99
Tmin = 0.735, Tmax = 0.904k = 1919
21292 measured reflectionsl = 1010
1811 independent reflections
Refinement top
Refinement on F20 restraints
Least-squares matrix: fullHydrogen site location: mixed
R[F2 > 2σ(F2)] = 0.019H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.055 w = 1/[σ2(Fo2) + (0.0316P)2 + 0.2947P]
where P = (Fo2 + 2Fc2)/3
S = 1.07(Δ/σ)max < 0.001
1811 reflectionsΔρmax = 0.34 e Å3
115 parametersΔρmin = 0.31 e Å3
Crystal data top
[Co(NO3)2(C4H4N2)(C2H3N)2(H2O)2]V = 789.10 (5) Å3
Mr = 381.18Z = 2
Monoclinic, P21/cMo Kα radiation
a = 7.0798 (3) ŵ = 1.14 mm1
b = 15.0376 (6) ÅT = 100 K
c = 7.9329 (3) Å0.29 × 0.11 × 0.08 mm
β = 110.8803 (6)°
Data collection top
Bruker APEXII DUO CCD
diffractometer
1811 independent reflections
Absorption correction: analytical
based on measured indexed crystal faces using SHELXTL2014 (Sheldrick, 2015b)
1687 reflections with I > 2σ(I)
Tmin = 0.735, Tmax = 0.904Rint = 0.022
21292 measured reflections
Refinement top
R[F2 > 2σ(F2)] = 0.0190 restraints
wR(F2) = 0.055H atoms treated by a mixture of independent and constrained refinement
S = 1.07Δρmax = 0.34 e Å3
1811 reflectionsΔρmin = 0.31 e Å3
115 parameters
Special details top

Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/Ueq
Co10.50000.50000.00000.00977 (8)
O10.45432 (12)0.38331 (6)0.13782 (12)0.01522 (17)
H1Y0.431 (3)0.3365 (13)0.092 (2)0.035 (5)*
H1X0.391 (3)0.3842 (13)0.243 (3)0.036 (5)*
N10.19570 (15)0.49931 (6)0.00181 (13)0.01163 (19)
N20.39794 (14)0.56807 (6)0.25144 (13)0.01470 (19)
C10.07744 (16)0.57128 (7)0.05354 (15)0.0134 (2)
H1A0.12830.62280.09230.016*
C20.11795 (16)0.57209 (7)0.05167 (14)0.0131 (2)
H2A0.19810.62420.08890.016*
C30.31802 (17)0.58923 (8)0.39744 (16)0.0158 (2)
C40.2144 (2)0.61342 (10)0.58544 (17)0.0278 (3)
H4A0.31220.63800.63460.042*
H4B0.11060.65800.59390.042*
H4C0.15080.56050.65450.042*
N110.23020 (15)0.30295 (7)0.44860 (13)0.0172 (2)
O110.09637 (15)0.26787 (6)0.31960 (13)0.0295 (2)
O120.21017 (14)0.38082 (6)0.49826 (12)0.0228 (2)
O130.39023 (13)0.26094 (6)0.53329 (12)0.0230 (2)
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
Co10.00857 (12)0.01064 (12)0.01028 (12)0.00011 (7)0.00357 (8)0.00023 (7)
O10.0187 (4)0.0130 (4)0.0136 (4)0.0023 (3)0.0053 (3)0.0011 (3)
N10.0107 (4)0.0130 (5)0.0112 (4)0.0000 (3)0.0038 (3)0.0005 (3)
N20.0142 (4)0.0151 (5)0.0151 (5)0.0002 (4)0.0056 (4)0.0010 (4)
C10.0135 (5)0.0125 (5)0.0144 (5)0.0006 (4)0.0051 (4)0.0011 (4)
C20.0128 (5)0.0127 (5)0.0138 (5)0.0012 (4)0.0045 (4)0.0013 (4)
C30.0144 (5)0.0164 (5)0.0178 (6)0.0005 (4)0.0072 (4)0.0008 (4)
C40.0215 (6)0.0426 (8)0.0162 (6)0.0002 (6)0.0029 (5)0.0093 (5)
N110.0222 (5)0.0137 (5)0.0149 (4)0.0015 (4)0.0057 (4)0.0004 (4)
O110.0319 (5)0.0190 (5)0.0236 (5)0.0026 (4)0.0073 (4)0.0018 (4)
O120.0315 (5)0.0134 (4)0.0213 (4)0.0030 (4)0.0067 (4)0.0024 (3)
O130.0207 (4)0.0198 (4)0.0232 (5)0.0041 (3)0.0012 (3)0.0054 (3)
Geometric parameters (Å, º) top
Co1—O12.0315 (8)C1—C21.3888 (15)
Co1—O1i2.0315 (8)C1—H1A0.9500
Co1—N2i2.1263 (9)C2—N1ii1.3425 (14)
Co1—N22.1263 (9)C2—H2A0.9500
Co1—N1i2.1493 (10)C3—C41.4542 (16)
Co1—N12.1493 (10)C4—H4A0.9800
O1—H1Y0.83 (2)C4—H4B0.9800
O1—H1X0.80 (2)C4—H4C0.9800
N1—C11.3401 (14)N11—O111.2378 (13)
N1—C2ii1.3425 (14)N11—O121.2595 (13)
N2—C31.1383 (15)N11—O131.2616 (13)
O1—Co1—O1i180.0C1—N1—Co1120.89 (7)
O1—Co1—N2i91.42 (4)C2ii—N1—Co1121.65 (7)
O1i—Co1—N2i88.58 (4)C3—N2—Co1165.59 (9)
O1—Co1—N288.58 (4)N1—C1—C2121.32 (10)
O1i—Co1—N291.42 (4)N1—C1—H1A119.3
N2i—Co1—N2180.0C2—C1—H1A119.3
O1—Co1—N1i88.55 (3)N1ii—C2—C1121.23 (10)
O1i—Co1—N1i91.45 (3)N1ii—C2—H2A119.4
N2i—Co1—N1i89.51 (4)C1—C2—H2A119.4
N2—Co1—N1i90.49 (4)N2—C3—C4178.24 (13)
O1—Co1—N191.45 (3)C3—C4—H4A109.5
O1i—Co1—N188.55 (3)C3—C4—H4B109.5
N2i—Co1—N190.49 (4)H4A—C4—H4B109.5
N2—Co1—N189.51 (4)C3—C4—H4C109.5
N1i—Co1—N1180.0H4A—C4—H4C109.5
Co1—O1—H1Y121.0 (12)H4B—C4—H4C109.5
Co1—O1—H1X118.3 (14)O11—N11—O12121.09 (10)
H1Y—O1—H1X110.2 (18)O11—N11—O13120.29 (10)
C1—N1—C2ii117.45 (10)O12—N11—O13118.61 (10)
Symmetry codes: (i) x+1, y+1, z; (ii) x, y+1, z.
Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
O1—H1Y···O13iii0.83 (2)1.85 (2)2.6819 (12)173.5 (18)
O1—H1X···O12iv0.80 (2)1.99 (2)2.7869 (12)174.1 (19)
O1—H1X···O13iv0.80 (2)2.562 (19)3.0912 (12)125.3 (17)
C1—H1A···O11ii0.952.543.1572 (14)123
C2—H2A···O13v0.952.593.4644 (14)153
C4—H4A···O13i0.982.493.2785 (17)138
C4—H4B···O11vi0.982.493.2823 (17)138
Symmetry codes: (i) x+1, y+1, z; (ii) x, y+1, z; (iii) x, y+1/2, z1/2; (iv) x, y, z1; (v) x, y+1/2, z+1/2; (vi) x, y+1/2, z1/2.
Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
O1—H1Y···O13i0.83 (2)1.85 (2)2.6819 (12)173.5 (18)
O1—H1X···O12ii0.80 (2)1.99 (2)2.7869 (12)174.1 (19)
O1—H1X···O13ii0.80 (2)2.562 (19)3.0912 (12)125.3 (17)
C1—H1A···O11iii0.952.543.1572 (14)123.0
C2—H2A···O13iv0.952.593.4644 (14)153.3
C4—H4A···O13v0.982.493.2785 (17)137.6
C4—H4B···O11vi0.982.493.2823 (17)137.5
Symmetry codes: (i) x, y+1/2, z1/2; (ii) x, y, z1; (iii) x, y+1, z; (iv) x, y+1/2, z+1/2; (v) x+1, y+1, z; (vi) x, y+1/2, z1/2.

Experimental details

Crystal data
Chemical formula[Co(NO3)2(C4H4N2)(C2H3N)2(H2O)2]
Mr381.18
Crystal system, space groupMonoclinic, P21/c
Temperature (K)100
a, b, c (Å)7.0798 (3), 15.0376 (6), 7.9329 (3)
β (°) 110.8803 (6)
V3)789.10 (5)
Z2
Radiation typeMo Kα
µ (mm1)1.14
Crystal size (mm)0.29 × 0.11 × 0.08
Data collection
DiffractometerBruker APEXII DUO CCD
Absorption correctionAnalytical
based on measured indexed crystal faces using SHELXTL2014 (Sheldrick, 2015b)
Tmin, Tmax0.735, 0.904
No. of measured, independent and
observed [I > 2σ(I)] reflections
21292, 1811, 1687
Rint0.022
(sin θ/λ)max1)0.650
Refinement
R[F2 > 2σ(F2)], wR(F2), S 0.019, 0.055, 1.07
No. of reflections1811
No. of parameters115
H-atom treatmentH atoms treated by a mixture of independent and constrained refinement
Δρmax, Δρmin (e Å3)0.34, 0.31

Computer programs: APEX2 (Bruker, 2014), SAINT (Bruker, 2014), SHELXLT (Sheldrick, 2015a), SHELXL2014/7 (Sheldrick, 2015b), XP in SHELXTL-Plus (Sheldrick, 2008) and ORTEP-3 for Windows (Farrugia, 2012), publCIF (Westrip, 2010).

 

Acknowledgements

CL wishes to thank the Research & Development Corporation of Newfoundland and Labrador for financial support. KAA wishes to acknowledge the National Science Foundation and the University of Florida for funding the purchase of the X-ray equipment.

References

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Volume 72| Part 2| February 2016| Pages 151-154
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