research communications
Two polymorphs of trans-[3-(3-nitrophenyl)oxiran-2-yl](phenyl)methanone
aChemistry Department, SUNY Buffalo State, 1300 Elmwood Ave, Buffalo, NY 14222, USA
*Correspondence e-mail: nazareay@buffalostate.edu
The title compound, C15H11NO4, crystallizes in two polymorphic forms, centrosymmetric monoclinic and chiral orthorhombic. The geometry of the molecules in the two polymorphs is slightly different, possibly due to intermolecular interactions. There are no classical hydrogen bonding in these two structures. However, a number of C—H⋯O intermolecular interactions, involving both O atoms of the nitro as well the benzoyl groups, stabilize the crystal structures.
Keywords: crystal structure; chalcone oxide; polymorphism.
1. Chemical context
The title compound is a substituted chalcone oxide, a representative of a large group of organic compounds which are precursors for pharmaceutically significant et al., 2005). As for most biologically important molecules, plays an important role in their reactions. These compounds can be also considered as isomers of substituted dibenzoylmethanes.
(MaraisThe simplest compound of this group, 1,3-diphenyl-2,3-epoxypropan-1-one (2-benzoyl-3-phenyloxirane, benzalacetophenone oxide) was isolated by Widman (1916) using Darzens condensation of benzaldehyde and bromoacetophenone in the presence of sodium ethoxide. When m-nitrobenzaldehyde was employed in this reaction, the title compound was obtained (Bodforss, 1916). The original publication mentioned the possibility of two different types of colorless crystals, both having the same melting point of 391 K. Later, a number of alternative synthetic routes were developed, including Claisen condensation of m-nitrobenzaldehyde with acetophenone with subsequent oxidation (Roth & Schwarz, 1961). The authors described the title compound as pale-yellow needles. A one-pot version of this synthesis was reported recently (Ngo et al., 2014). Preparation of nitrochalcone oxides seems to be one of the simplest condensation reactions and therefore attractive for use in undergraduate organic chemistry teaching laboratories. The interesting observation of possible in the original publication encouraged us to conduct a structural study, exactly one hundred years after the first preparation of this compound had been reported.
2. Structural commentary
The title compound, C15H11NO4, crystallizes in two polymorphic forms, centrosymmetric monoclinic (1) and chiral orthorhombic (2). Bond lengths and angles in the molecules of both polymorphs are very similar (Figs. 1 and 2). However, a molecular overlay (Fig. 3) reveals some difference in conformation, possibly because of different types of intermolecular interactions.
All atoms of the title polymorphs, except the oxiran ring hydrogen atoms, are located close to one of three planes: the benzene ring mean plane of the nitro-phenyl group (A), the oxiran ring plane (B), and the benzene ring plane of the benzoyl group (C). The largest deviations from these planes are −0.2003 (14) and 0.0457 (15) for O3 and O4 (monoclinic polymorph), 0.091 (4) and −0.189 (3) for O3 and O4 (orthorhombic), and 0.3398 (14) and 0.065 (3) for atom O1 in the monoclinic and the orthorhombic forms, respectively. Planes A and B are almost perpendicular in both polymorphs (Table 1). The angles between the two other planes differ significantly (Table 1).
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3. Supramolecular features
There are no classical hydrogen bonds in these two polymorphs. In the molecules, areas of negative electrostatic potential are located in the vicinity of all four oxygen atoms. Areas near hydrogen atoms are obviously positive, providing a tool for intermolecular interactions. This expectation is supported by the packing data. In both polymorphs, the two oxygen atoms O3 and O4 of the nitro group and oxygen atom O1 of the carbonyl group act as acceptors for C—H⋯O hydrogen bonds. Despite being relatively weak, such bonds play a significant role in intermolecular interactions (Desiraju & Steiner, 1999). Hydrogen atom H5 of the nitrophenyl group makes short contacts with the O1 oxygen of the carbonyl group in both cases. However, the short contacts involving the nitro group oxygen atoms O3 and O4 (Tables 2 and 3) are different in the two polymorphs. In the orthorhombic polymorph, the oxiran ring hydrogen atom H8 makes a short contact to one of the nitro group oxygen atoms. Another oxiran ring hydrogen atom makes a contact with carbonyl group oxygen O1 that is slightly longer than usual for C—H⋯O bonding [D—H 1.000 (19), H⋯A 2.64 (2), D⋯A 3.419 (2) Å; D–-H⋯A 134.7 (2)°]. There are a number of C—H⋯π contacts that are on the long side of what is still considered to be an attractive interaction: C12—H12⋯C14(x, − z, + z) and C1—H1⋯C13(1 − x, 1 − y, 2 − z) in the monoclinic form with C⋯C distances of 3.7870 (15) and 3.7637 (12) Å, respectively, and C14—H14⋯C2( − x, 1 − y, −0.5 + z) in the orthorhombic form with a C⋯C distance of 3.731 (3) Å.
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Without strong intermolecular bonding, the close-packing principle directs the assembly of molecules in the crystal. A multi-step approach to assembling is sometimes referred as the Kitaigorodskii Aufbau Principle (KAP) and may consist of the following sequence (Kitaigorodskii, 1961; Perlstein, 1994): (a) a single molecule or a number of molecules forming a unit; (b) units join up to form a chain; (c) chains assemble to make a 2D surface and (d) surfaces are stacked to form a crystal.
This sequence can be traced in the structure of the orthorhombic polymorph. Molecules of the title compound are stacked to form a chain along [100] axis (Fig. 4). An oxiran group forms a `wedge' that fits into a concave `pocket' between two phenyl rings of the next molecule. The interatomic distances between oxiran oxygen atom O2 and the corresponding carbon atoms are unusually short: O2⋯C7(1 + x, y, z) = 3.113 (2), O2⋯C8(1 + x, y, z) = 2.960 (2) and O2⋯C9(1 + x, y, z) = 2.979 (2) Å. Two separate causes can make these short contacts possible: (i) dipole–dipole attraction of consecutive oxiran groups and (ii) close packing of recurrent flat benzoyl and nitrophenyl groups with the distances between their mean planes being 3.472 (2) and 3.493 (2), respectively. Because all these groups are parallel, there is no hydrogen bonding within the chain. At the next level, chains are packed in the (001) plane via a 21 with all oxiran groups oriented in one direction (Fig. 5). Finally, chains are closely packed with the next 21 operation, forming a crystal with favorable hydrogen bonding (Fig. 6).
The monoclinic form of the title compound is possible only if the starting solution contains a π-stacked via inversion centers via their nitrophenyl groups and two symmetric hydrogen bonds (Fig. 7). The distance between the parallel planes of these phenyl rings is 3.4115 (10), which is slightly longer than in polyaromatic hydrocarbons (3.38 Å; Kitaigorodskii, 1961) and indicates very close packing. These centrosymmetric units are assembled in the (100) plane via a system of hydrogen bonds (Fig. 8). The stacking planar assemblies in the 3D crystal uses no additional hydrogen bonding.
In the first step, two molecules areThe assembling sequence is mechanically more straightforward in the case of the chiral orthorhombic form, which results in favorable formation of the orthorhombic polymorph. The absence of an enantiomer requirement may also make it kinetically more favorable. These two factors can serve as a qualitative explanation of the preferred formation of the orthorhombic form upon crystallization from ) and, therefore, closer packing of molecules, an indication that the monoclinic form might be the thermodynamically slightly more stable of the polymorphs according to Burger and Ramberger's Density Rule (Burger & Ramberger, 1979a,b). Nevertheless, the packing of the two forms is significantly different and transition from one form to another requires dissolution of the crystal. This observation explains the kinetic stability of both forms at room temperature and at 173 K.
or from hexane. The monoclinic form has a slightly smaller cell volume (see Table 4
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4. Database survey
There are sixteen reported chalcone oxide structures deposited in the Cambridge Structural Database (CSD Version 5.37; Groom et al., 2016). Of these structures, six report hydroxy- and methoxy-substituted molecules with strong intermolecular interactions. The closest to our study is [3-(4-nitrophenyl)oxiran-2-yl](phenyl)methanone (refcode COVKAB; Obregón-Mendoza et al., 2014). In this case, the oxiran oxygen atom makes short contacts instead of the benzoyl group; the p-nitrophenyl ring is practically flat. The simplest unsubstituted chalcone oxide was recently reported (refcode TIBXIM; Zaidi et al., 2007). In this structure, like in our case, only the benzoyl group oxygen atom makes short intermolecular contacts. Chains similar to those in the orthorhombic form of the title molecule are present in the chiral P21 crystal of [3-(4-chlorophenyl)oxiran-2-yl](phenyl)methanone (refcode QECFAF; Bakó et al., 1999). However, the distances between oxiran oxygen atom and the subsequent carbon atoms are much longer than in the present case.
5. Synthesis and crystallization
The title compound was obtained via the classic route (Bodforss, 1916). Mass-spectrum (EI): 269 (M+, 20%), 105 (PhCO+, 100), 77 (Ph+, 60). Because all precursor compounds were non-chiral and synthetic conditions should not induce we expected to see a racemic product. Crystallization from hexane yielded colorless thin needles suitable for single-crystal investigation. X-ray diffraction data revealed the chiral orthorhombic P212121. Crystallization from ethanol produced better quality crystals of the same polymorph, one of which was used in this study. After two weeks of standing at 273 K, a number of large (up to 1 mm) crystals were observed in the remaining ethanol solution (Fig. 9). A suitable crystal was cut to dimensions appropriate for X-ray analysis. It turned out to be a monoclinic P21/c polymorph of the same compound. Several crystals of different shape, also formed from the same solution, resulted to be of a benzoin admixture.
6. Refinement
Crystal data, data collection and structure . The structure of the orthorhombic polymorph was refined as a two-component All hydrogen atoms in the monoclinic form were refined in isotropic approximation. In the orthorhombic form, the oxiran ring hydrogen atoms H7 and H8 were refined in isotropic approximation with Uiso = 1.2Uiso(C). All aromatic hydrogen atoms in this molecule were refined with riding coordinates and Uiso = 1.2Uiso(C).
details are summarized in Table 4For the monoclinic polymorph structure, positive residual density was observed at all bonds between non-hydrogen atoms, demonstrating the limitations of the atom-in-molecule approach for high-resolution structures of organic molecules.
Supporting information
https://doi.org/10.1107/S2056989016010239/zl2667sup1.cif
contains datablocks 1, 2. DOI:Structure factors: contains datablock 1. DOI: https://doi.org/10.1107/S2056989016010239/zl26671sup5.hkl
Structure factors: contains datablock 2. DOI: https://doi.org/10.1107/S2056989016010239/zl26672sup6.hkl
Supporting information file. DOI: https://doi.org/10.1107/S2056989016010239/zl26671sup7.cdx
Supporting information file. DOI: https://doi.org/10.1107/S2056989016010239/zl26671sup5.cml
Supporting information file. DOI: https://doi.org/10.1107/S2056989016010239/zl26672sup6.cml
For both compounds, data collection: APEX2 (Bruker, 2013); cell
SAINT (Bruker, 2013); data reduction: SAINT (Bruker, 2013); program(s) used to solve structure: SHELXT (Sheldrick, 2015a); program(s) used to refine structure: SHELXL2014 (Sheldrick, 2015b). Molecular graphics: OLEX2 (Dolomanov et al., 2009) and CrystalExplorer (Spackman & Jayatilaka, 2009) for (1); OLEX2 (Dolomanov et al., 2009) for (2). For both compounds, software used to prepare material for publication: OLEX2 (Dolomanov et al., 2009).C15H11NO4 | F(000) = 560 |
Mr = 269.25 | Dx = 1.452 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
a = 7.8463 (5) Å | Cell parameters from 9972 reflections |
b = 16.2514 (9) Å | θ = 3.0–30.6° |
c = 10.2032 (6) Å | µ = 0.11 mm−1 |
β = 108.839 (2)° | T = 173 K |
V = 1231.35 (13) Å3 | Block, colourless |
Z = 4 | 0.5 × 0.45 × 0.4 mm |
Bruker PHOTON-100 CMOS diffractometer | 4604 reflections with I > 2σ(I) |
Radiation source: sealedtube | Rint = 0.031 |
φ and ω scans | θmax = 35.6°, θmin = 3.0° |
Absorption correction: multi-scan (SADABS; Bruker, 2014) | h = −11→12 |
Tmin = 0.942, Tmax = 0.969 | k = −26→25 |
60976 measured reflections | l = −16→14 |
5593 independent reflections |
Refinement on F2 | 0 restraints |
Least-squares matrix: full | Hydrogen site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.044 | All H-atom parameters refined |
wR(F2) = 0.125 | w = 1/[σ2(Fo2) + (0.0672P)2 + 0.211P] where P = (Fo2 + 2Fc2)/3 |
S = 1.06 | (Δ/σ)max = 0.001 |
5593 reflections | Δρmax = 0.49 e Å−3 |
225 parameters | Δρmin = −0.23 e Å−3 |
Experimental. SADABS-2014/5 (Bruker,2014/5) was used for absorption correction. wR2(int) was 0.0614 before and 0.0562 after correction. The Ratio of minimum to maximum transmission is 0.8403. The λ/2 correction factor is 0.00150. |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
x | y | z | Uiso*/Ueq | ||
O1 | 0.25037 (8) | 0.71203 (4) | 0.99764 (7) | 0.02695 (13) | |
O2 | 0.10970 (8) | 0.58236 (5) | 0.82016 (7) | 0.03095 (15) | |
O3 | 0.36177 (10) | 0.64512 (4) | 0.29974 (8) | 0.03355 (15) | |
O4 | 0.32859 (13) | 0.52785 (6) | 0.19647 (8) | 0.0453 (2) | |
N1 | 0.32668 (10) | 0.57168 (5) | 0.29372 (7) | 0.02557 (14) | |
C1 | 0.21037 (11) | 0.46686 (5) | 0.63244 (8) | 0.02330 (14) | |
H1 | 0.1830 (17) | 0.4424 (8) | 0.7101 (13) | 0.031 (3)* | |
C2 | 0.22642 (12) | 0.41642 (5) | 0.52697 (9) | 0.02570 (15) | |
H2 | 0.2120 (17) | 0.3571 (8) | 0.5326 (14) | 0.033 (3)* | |
C3 | 0.26219 (11) | 0.44992 (5) | 0.41329 (8) | 0.02357 (14) | |
H3 | 0.2706 (18) | 0.4158 (8) | 0.3413 (14) | 0.032 (3)* | |
C4 | 0.28236 (9) | 0.53439 (5) | 0.40956 (7) | 0.01988 (13) | |
C5 | 0.26492 (10) | 0.58642 (5) | 0.51200 (7) | 0.01960 (13) | |
H5 | 0.2789 (16) | 0.6449 (8) | 0.5052 (13) | 0.027 (3)* | |
C6 | 0.22844 (9) | 0.55193 (5) | 0.62477 (7) | 0.01941 (13) | |
C7 | 0.21159 (10) | 0.60861 (5) | 0.73395 (8) | 0.02193 (14) | |
H7 | 0.1953 (17) | 0.6670 (8) | 0.7099 (14) | 0.032 (3)* | |
C8 | 0.29883 (10) | 0.59190 (5) | 0.88324 (8) | 0.02108 (13) | |
H8 | 0.3656 (16) | 0.5410 (8) | 0.9094 (13) | 0.029 (3)* | |
C9 | 0.35983 (10) | 0.66437 (4) | 0.97908 (7) | 0.01953 (13) | |
C10 | 0.55753 (10) | 0.67524 (4) | 1.04317 (7) | 0.01900 (12) | |
C11 | 0.62448 (11) | 0.72792 (5) | 1.15652 (8) | 0.02299 (14) | |
H11 | 0.5381 (18) | 0.7560 (9) | 1.1946 (14) | 0.033 (3)* | |
C12 | 0.80912 (12) | 0.73856 (5) | 1.21587 (10) | 0.02919 (17) | |
H12 | 0.856 (2) | 0.7750 (10) | 1.2949 (15) | 0.043 (4)* | |
C13 | 0.92704 (12) | 0.69765 (6) | 1.16210 (12) | 0.0331 (2) | |
H13 | 1.053 (2) | 0.7034 (10) | 1.2027 (17) | 0.048 (4)* | |
C14 | 0.86192 (12) | 0.64582 (6) | 1.04894 (12) | 0.03278 (19) | |
H14 | 0.948 (2) | 0.6188 (10) | 1.0128 (17) | 0.052 (4)* | |
C15 | 0.67737 (11) | 0.63440 (5) | 0.98993 (9) | 0.02569 (15) | |
H15 | 0.6281 (19) | 0.5978 (9) | 0.9086 (15) | 0.039 (3)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.0250 (3) | 0.0243 (3) | 0.0327 (3) | 0.0034 (2) | 0.0109 (2) | −0.0014 (2) |
O2 | 0.0229 (3) | 0.0469 (4) | 0.0248 (3) | −0.0096 (2) | 0.0101 (2) | −0.0091 (3) |
O3 | 0.0413 (4) | 0.0311 (3) | 0.0333 (3) | −0.0001 (3) | 0.0191 (3) | 0.0067 (3) |
O4 | 0.0700 (6) | 0.0447 (4) | 0.0303 (4) | 0.0012 (4) | 0.0286 (4) | −0.0066 (3) |
N1 | 0.0262 (3) | 0.0311 (3) | 0.0211 (3) | 0.0044 (2) | 0.0100 (2) | 0.0018 (2) |
C1 | 0.0259 (3) | 0.0218 (3) | 0.0206 (3) | −0.0013 (2) | 0.0052 (3) | 0.0019 (2) |
C2 | 0.0295 (4) | 0.0191 (3) | 0.0257 (4) | −0.0018 (3) | 0.0051 (3) | −0.0010 (3) |
C3 | 0.0246 (3) | 0.0219 (3) | 0.0221 (3) | 0.0010 (2) | 0.0046 (3) | −0.0040 (3) |
C4 | 0.0188 (3) | 0.0226 (3) | 0.0175 (3) | 0.0021 (2) | 0.0049 (2) | 0.0002 (2) |
C5 | 0.0207 (3) | 0.0189 (3) | 0.0184 (3) | 0.0015 (2) | 0.0053 (2) | 0.0004 (2) |
C6 | 0.0191 (3) | 0.0211 (3) | 0.0165 (3) | 0.0017 (2) | 0.0036 (2) | 0.0002 (2) |
C7 | 0.0234 (3) | 0.0241 (3) | 0.0180 (3) | 0.0040 (2) | 0.0062 (2) | 0.0001 (2) |
C8 | 0.0231 (3) | 0.0205 (3) | 0.0182 (3) | −0.0017 (2) | 0.0048 (2) | −0.0002 (2) |
C9 | 0.0221 (3) | 0.0191 (3) | 0.0178 (3) | −0.0001 (2) | 0.0070 (2) | 0.0009 (2) |
C10 | 0.0213 (3) | 0.0186 (3) | 0.0183 (3) | −0.0012 (2) | 0.0080 (2) | −0.0003 (2) |
C11 | 0.0269 (3) | 0.0198 (3) | 0.0222 (3) | −0.0030 (2) | 0.0079 (3) | −0.0021 (2) |
C12 | 0.0297 (4) | 0.0233 (3) | 0.0294 (4) | −0.0077 (3) | 0.0024 (3) | 0.0009 (3) |
C13 | 0.0221 (3) | 0.0280 (4) | 0.0459 (5) | −0.0042 (3) | 0.0063 (3) | 0.0093 (4) |
C14 | 0.0257 (4) | 0.0331 (4) | 0.0447 (5) | 0.0023 (3) | 0.0186 (4) | 0.0049 (4) |
C15 | 0.0270 (3) | 0.0270 (4) | 0.0267 (4) | 0.0007 (3) | 0.0138 (3) | −0.0023 (3) |
O1—C9 | 1.2159 (9) | C7—H7 | 0.978 (14) |
O2—C7 | 1.4314 (10) | C7—C8 | 1.4796 (11) |
O2—C8 | 1.4225 (10) | C8—H8 | 0.970 (13) |
O3—N1 | 1.2220 (10) | C8—C9 | 1.5067 (11) |
O4—N1 | 1.2254 (10) | C9—C10 | 1.4867 (10) |
N1—C4 | 1.4664 (10) | C10—C11 | 1.3978 (10) |
C1—H1 | 0.970 (13) | C10—C15 | 1.3964 (10) |
C1—C2 | 1.3905 (12) | C11—H11 | 0.994 (13) |
C1—C6 | 1.3945 (11) | C11—C12 | 1.3888 (12) |
C2—H2 | 0.974 (14) | C12—H12 | 0.972 (15) |
C2—C3 | 1.3895 (12) | C12—C13 | 1.3882 (15) |
C3—H3 | 0.939 (13) | C13—H13 | 0.946 (16) |
C3—C4 | 1.3838 (11) | C13—C14 | 1.3866 (16) |
C4—C5 | 1.3851 (10) | C14—H14 | 0.969 (16) |
C5—H5 | 0.962 (13) | C14—C15 | 1.3895 (13) |
C5—C6 | 1.3902 (10) | C15—H15 | 0.992 (14) |
C6—C7 | 1.4838 (10) | ||
C8—O2—C7 | 62.46 (5) | O2—C8—C7 | 59.07 (5) |
O3—N1—O4 | 123.16 (8) | O2—C8—H8 | 115.1 (7) |
O3—N1—C4 | 118.12 (7) | O2—C8—C9 | 116.43 (6) |
O4—N1—C4 | 118.72 (8) | C7—C8—H8 | 118.0 (7) |
C2—C1—H1 | 119.3 (8) | C7—C8—C9 | 117.97 (7) |
C2—C1—C6 | 120.32 (7) | C9—C8—H8 | 117.3 (7) |
C6—C1—H1 | 120.3 (8) | O1—C9—C8 | 120.45 (7) |
C1—C2—H2 | 119.8 (8) | O1—C9—C10 | 123.02 (7) |
C3—C2—C1 | 120.55 (7) | C10—C9—C8 | 116.50 (6) |
C3—C2—H2 | 119.7 (8) | C11—C10—C9 | 119.79 (7) |
C2—C3—H3 | 120.4 (8) | C15—C10—C9 | 120.69 (7) |
C4—C3—C2 | 117.86 (7) | C15—C10—C11 | 119.52 (7) |
C4—C3—H3 | 121.7 (8) | C10—C11—H11 | 118.9 (8) |
C3—C4—N1 | 119.41 (7) | C12—C11—C10 | 119.83 (8) |
C3—C4—C5 | 123.01 (7) | C12—C11—H11 | 121.3 (8) |
C5—C4—N1 | 117.58 (7) | C11—C12—H12 | 120.1 (9) |
C4—C5—H5 | 120.5 (8) | C13—C12—C11 | 120.17 (8) |
C4—C5—C6 | 118.39 (7) | C13—C12—H12 | 119.8 (9) |
C6—C5—H5 | 121.1 (7) | C12—C13—H13 | 121.1 (10) |
C1—C6—C7 | 122.54 (7) | C14—C13—C12 | 120.44 (8) |
C5—C6—C1 | 119.86 (7) | C14—C13—H13 | 118.5 (10) |
C5—C6—C7 | 117.60 (7) | C13—C14—H14 | 118.5 (10) |
O2—C7—C6 | 118.63 (7) | C13—C14—C15 | 119.62 (8) |
O2—C7—H7 | 112.9 (8) | C15—C14—H14 | 121.9 (10) |
O2—C7—C8 | 58.48 (5) | C10—C15—H15 | 118.7 (8) |
C6—C7—H7 | 116.7 (8) | C14—C15—C10 | 120.42 (8) |
C8—C7—C6 | 122.36 (7) | C14—C15—H15 | 120.8 (8) |
C8—C7—H7 | 114.6 (8) | ||
O1—C9—C10—C11 | 17.50 (11) | C5—C6—C7—O2 | 156.24 (7) |
O1—C9—C10—C15 | −161.44 (8) | C5—C6—C7—C8 | −134.82 (8) |
O2—C7—C8—C9 | −105.63 (8) | C6—C1—C2—C3 | 0.57 (12) |
O2—C8—C9—O1 | −1.28 (11) | C6—C7—C8—O2 | −106.07 (8) |
O2—C8—C9—C10 | −178.97 (6) | C6—C7—C8—C9 | 148.30 (7) |
O3—N1—C4—C3 | −172.68 (7) | C7—O2—C8—C9 | 108.23 (7) |
O3—N1—C4—C5 | 6.50 (11) | C7—C8—C9—O1 | 66.02 (10) |
O4—N1—C4—C3 | 6.60 (11) | C7—C8—C9—C10 | −111.67 (8) |
O4—N1—C4—C5 | −174.22 (8) | C8—O2—C7—C6 | 112.36 (7) |
N1—C4—C5—C6 | −178.05 (6) | C8—C9—C10—C11 | −164.87 (7) |
C1—C2—C3—C4 | 0.47 (12) | C8—C9—C10—C15 | 16.19 (10) |
C1—C6—C7—O2 | −24.23 (11) | C9—C10—C11—C12 | −179.56 (7) |
C1—C6—C7—C8 | 44.72 (11) | C9—C10—C15—C14 | 178.98 (8) |
C2—C1—C6—C5 | −0.81 (11) | C10—C11—C12—C13 | 0.61 (13) |
C2—C1—C6—C7 | 179.66 (7) | C11—C10—C15—C14 | 0.05 (12) |
C2—C3—C4—N1 | 177.80 (7) | C11—C12—C13—C14 | −0.05 (14) |
C2—C3—C4—C5 | −1.33 (11) | C12—C13—C14—C15 | −0.52 (14) |
C3—C4—C5—C6 | 1.10 (11) | C13—C14—C15—C10 | 0.52 (14) |
C4—C5—C6—C1 | 0.00 (10) | C15—C10—C11—C12 | −0.61 (12) |
C4—C5—C6—C7 | 179.55 (6) |
D—H···A | D—H | H···A | D···A | D—H···A |
C5—H5···O1i | 0.962 (13) | 2.335 (13) | 3.2791 (11) | 167.0 (11) |
C13—H13···O3ii | 0.945 (17) | 2.490 (17) | 3.3530 (13) | 152.0 (13) |
C15—H15···O4iii | 0.992 (14) | 2.381 (15) | 3.2426 (13) | 144.8 (12) |
Symmetry codes: (i) x, −y+3/2, z−1/2; (ii) x+1, y, z+1; (iii) −x+1, −y+1, −z+1. |
C15H11NO4 | Dx = 1.434 Mg m−3 |
Mr = 269.25 | Cu Kα radiation, λ = 1.54178 Å |
Orthorhombic, P212121 | Cell parameters from 9668 reflections |
a = 4.1615 (2) Å | θ = 3.7–77.7° |
b = 14.7498 (6) Å | µ = 0.88 mm−1 |
c = 20.3168 (8) Å | T = 173 K |
V = 1247.07 (9) Å3 | Needle, colourless |
Z = 4 | 0.44 × 0.07 × 0.06 mm |
F(000) = 560 |
Bruker PHOTON-100 CMOS diffractometer | 2435 reflections with I > 2σ(I) |
Radiation source: sealedtube | Rint = 0.037 |
φ and ω scans | θmax = 78.6°, θmin = 3.7° |
Absorption correction: multi-scan (SADABS; Bruker, 2014) | h = −5→5 |
Tmin = 0.798, Tmax = 0.950 | k = −18→18 |
39306 measured reflections | l = −23→22 |
2640 independent reflections |
Refinement on F2 | Hydrogen site location: mixed |
Least-squares matrix: full | H atoms treated by a mixture of independent and constrained refinement |
R[F2 > 2σ(F2)] = 0.029 | w = 1/[σ2(Fo2) + (0.0345P)2 + 0.1972P] where P = (Fo2 + 2Fc2)/3 |
wR(F2) = 0.071 | (Δ/σ)max = 0.001 |
S = 1.06 | Δρmax = 0.13 e Å−3 |
2640 reflections | Δρmin = −0.15 e Å−3 |
197 parameters | Absolute structure: Refined as an inversion twin |
0 restraints | Absolute structure parameter: 0.3 (2) |
Experimental. SADABS-2014/5 (Bruker,2014/5) was used for absorption correction. wR2(int) was 0.0614 before and 0.0562 after correction. The Ratio of minimum to maximum transmission is 0.8403. The λ/2 correction factor is 0.00150. |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refined as a 2-component inversion twin. |
x | y | z | Uiso*/Ueq | ||
O1 | 0.6417 (4) | 0.36468 (8) | 0.45872 (6) | 0.0372 (3) | |
O2 | 0.9762 (3) | 0.34403 (8) | 0.57437 (6) | 0.0356 (3) | |
O3 | 0.2003 (5) | 0.02869 (10) | 0.71337 (7) | 0.0606 (5) | |
O4 | 0.2482 (5) | 0.05976 (11) | 0.81622 (7) | 0.0567 (5) | |
N1 | 0.2991 (5) | 0.07647 (11) | 0.75797 (7) | 0.0395 (4) | |
C1 | 0.8151 (5) | 0.31290 (13) | 0.71103 (9) | 0.0335 (4) | |
H1 | 0.934 (3) | 0.3678 (12) | 0.7004 (3) | 0.040* | |
C2 | 0.7899 (5) | 0.28508 (14) | 0.77607 (9) | 0.0383 (5) | |
H2 | 0.894 (2) | 0.3214 (8) | 0.8115 (8) | 0.046* | |
C3 | 0.6211 (5) | 0.20742 (13) | 0.79219 (10) | 0.0363 (4) | |
H3 | 0.6010 (7) | 0.1885 (4) | 0.8363 (10) | 0.044* | |
C4 | 0.4826 (5) | 0.15840 (12) | 0.74146 (8) | 0.0306 (4) | |
C5 | 0.5055 (4) | 0.18379 (11) | 0.67600 (8) | 0.0273 (4) | |
H5 | 0.411 (2) | 0.1484 (8) | 0.6426 (7) | 0.033* | |
C6 | 0.6718 (4) | 0.26278 (11) | 0.66071 (8) | 0.0268 (4) | |
C7 | 0.6967 (4) | 0.29204 (11) | 0.59069 (8) | 0.0264 (3) | |
H7 | 0.633 (5) | 0.2466 (13) | 0.5566 (9) | 0.032* | |
C8 | 0.6695 (4) | 0.38876 (11) | 0.57279 (9) | 0.0272 (3) | |
H8 | 0.635 (5) | 0.4318 (13) | 0.6078 (9) | 0.033* | |
C9 | 0.5571 (4) | 0.41215 (12) | 0.50441 (8) | 0.0266 (4) | |
C10 | 0.3543 (4) | 0.49418 (11) | 0.49357 (8) | 0.0257 (4) | |
C11 | 0.2260 (4) | 0.54583 (11) | 0.54460 (9) | 0.0281 (4) | |
H11 | 0.2629 (9) | 0.5280 (4) | 0.5902 (9) | 0.034* | |
C12 | 0.0454 (5) | 0.62269 (12) | 0.53064 (10) | 0.0354 (4) | |
H12 | −0.050 (2) | 0.6595 (8) | 0.5677 (8) | 0.043* | |
C13 | −0.0041 (5) | 0.64890 (14) | 0.46594 (10) | 0.0411 (5) | |
H13 | −0.129 (3) | 0.7042 (14) | 0.4561 (3) | 0.049* | |
C14 | 0.1213 (5) | 0.59745 (14) | 0.41521 (10) | 0.0425 (5) | |
H14 | 0.0836 (10) | 0.6162 (4) | 0.3684 (11) | 0.051* | |
C15 | 0.2985 (5) | 0.52018 (13) | 0.42860 (9) | 0.0340 (4) | |
H15 | 0.3863 (19) | 0.4831 (8) | 0.3917 (8) | 0.041* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.0483 (8) | 0.0309 (7) | 0.0324 (7) | 0.0018 (6) | 0.0107 (6) | −0.0037 (5) |
O2 | 0.0210 (6) | 0.0352 (7) | 0.0505 (8) | 0.0011 (5) | 0.0039 (6) | 0.0093 (6) |
O3 | 0.0981 (14) | 0.0469 (9) | 0.0369 (8) | −0.0287 (10) | −0.0071 (8) | 0.0088 (6) |
O4 | 0.0853 (14) | 0.0539 (9) | 0.0308 (8) | −0.0030 (9) | 0.0051 (7) | 0.0159 (6) |
N1 | 0.0533 (11) | 0.0351 (9) | 0.0302 (9) | 0.0034 (8) | −0.0007 (7) | 0.0098 (6) |
C1 | 0.0293 (9) | 0.0336 (10) | 0.0376 (10) | 0.0009 (8) | −0.0035 (8) | −0.0067 (7) |
C2 | 0.0380 (11) | 0.0436 (11) | 0.0333 (11) | 0.0052 (9) | −0.0082 (8) | −0.0118 (8) |
C3 | 0.0408 (11) | 0.0420 (11) | 0.0260 (9) | 0.0123 (9) | −0.0045 (7) | −0.0017 (7) |
C4 | 0.0354 (9) | 0.0280 (9) | 0.0285 (9) | 0.0077 (8) | −0.0014 (7) | 0.0029 (6) |
C5 | 0.0324 (9) | 0.0265 (8) | 0.0231 (8) | 0.0045 (8) | −0.0014 (7) | −0.0011 (6) |
C6 | 0.0248 (9) | 0.0258 (8) | 0.0297 (9) | 0.0047 (7) | 0.0003 (7) | −0.0017 (6) |
C7 | 0.0235 (8) | 0.0248 (8) | 0.0307 (9) | 0.0007 (7) | 0.0038 (7) | −0.0003 (6) |
C8 | 0.0243 (8) | 0.0245 (8) | 0.0327 (9) | 0.0005 (7) | −0.0011 (7) | −0.0014 (7) |
C9 | 0.0261 (9) | 0.0240 (9) | 0.0298 (9) | −0.0046 (7) | 0.0044 (7) | −0.0009 (6) |
C10 | 0.0252 (8) | 0.0236 (8) | 0.0282 (9) | −0.0054 (7) | 0.0014 (7) | 0.0015 (6) |
C11 | 0.0290 (9) | 0.0242 (8) | 0.0312 (9) | −0.0018 (7) | −0.0015 (7) | −0.0004 (6) |
C12 | 0.0317 (10) | 0.0278 (9) | 0.0468 (11) | −0.0004 (8) | −0.0017 (8) | −0.0033 (8) |
C13 | 0.0361 (10) | 0.0307 (10) | 0.0565 (13) | 0.0032 (9) | −0.0058 (9) | 0.0116 (8) |
C14 | 0.0397 (11) | 0.0480 (12) | 0.0399 (11) | −0.0015 (9) | −0.0056 (9) | 0.0167 (9) |
C15 | 0.0333 (10) | 0.0381 (10) | 0.0304 (9) | −0.0040 (8) | 0.0009 (8) | 0.0042 (7) |
O1—C9 | 1.215 (2) | C7—H7 | 1.000 (19) |
O2—C7 | 1.432 (2) | C7—C8 | 1.477 (2) |
O2—C8 | 1.437 (2) | C8—H8 | 0.964 (19) |
O3—N1 | 1.219 (2) | C8—C9 | 1.506 (2) |
O4—N1 | 1.227 (2) | C9—C10 | 1.491 (2) |
N1—C4 | 1.468 (2) | C10—C11 | 1.393 (2) |
C1—H1 | 0.97 (2) | C10—C15 | 1.394 (2) |
C1—C2 | 1.388 (3) | C11—H11 | 0.974 (19) |
C1—C6 | 1.395 (2) | C11—C12 | 1.389 (2) |
C2—H2 | 1.00 (2) | C12—H12 | 1.01 (2) |
C2—C3 | 1.383 (3) | C12—C13 | 1.386 (3) |
C3—H3 | 0.94 (2) | C13—H13 | 0.99 (2) |
C3—C4 | 1.385 (3) | C13—C14 | 1.382 (3) |
C4—C5 | 1.385 (2) | C14—H14 | 1.00 (2) |
C5—H5 | 0.943 (19) | C14—C15 | 1.385 (3) |
C5—C6 | 1.390 (2) | C15—H15 | 1.00 (2) |
C6—C7 | 1.490 (2) | ||
C7—O2—C8 | 61.95 (10) | O2—C8—C7 | 58.85 (11) |
O3—N1—O4 | 122.84 (18) | O2—C8—H8 | 114.7 (13) |
O3—N1—C4 | 118.77 (15) | O2—C8—C9 | 113.67 (14) |
O4—N1—C4 | 118.38 (16) | C7—C8—H8 | 117.8 (11) |
C2—C1—H1 | 119.7 | C7—C8—C9 | 118.19 (15) |
C2—C1—C6 | 120.58 (18) | C9—C8—H8 | 118.9 (12) |
C6—C1—H1 | 119.7 | O1—C9—C8 | 118.87 (16) |
C1—C2—H2 | 119.7 | O1—C9—C10 | 121.25 (15) |
C3—C2—C1 | 120.59 (18) | C10—C9—C8 | 119.85 (14) |
C3—C2—H2 | 119.7 | C11—C10—C9 | 123.41 (15) |
C2—C3—H3 | 121.1 | C11—C10—C15 | 119.37 (16) |
C2—C3—C4 | 117.87 (18) | C15—C10—C9 | 117.21 (15) |
C4—C3—H3 | 121.1 | C10—C11—H11 | 119.9 |
C3—C4—N1 | 118.44 (16) | C12—C11—C10 | 120.11 (16) |
C3—C4—C5 | 123.03 (18) | C12—C11—H11 | 119.9 |
C5—C4—N1 | 118.52 (16) | C11—C12—H12 | 119.9 |
C4—C5—H5 | 120.8 | C13—C12—C11 | 120.10 (18) |
C4—C5—C6 | 118.39 (16) | C13—C12—H12 | 119.9 |
C6—C5—H5 | 120.8 | C12—C13—H13 | 120.1 |
C1—C6—C7 | 121.08 (16) | C14—C13—C12 | 119.89 (19) |
C5—C6—C1 | 119.53 (16) | C14—C13—H13 | 120.1 |
C5—C6—C7 | 119.39 (15) | C13—C14—H14 | 119.8 |
O2—C7—C6 | 115.65 (15) | C13—C14—C15 | 120.43 (18) |
O2—C7—H7 | 114.4 (12) | C15—C14—H14 | 119.8 |
O2—C7—C8 | 59.20 (10) | C10—C15—H15 | 120.0 |
C6—C7—H7 | 116.7 (11) | C14—C15—C10 | 120.09 (18) |
C8—C7—C6 | 120.63 (15) | C14—C15—H15 | 120.0 |
C8—C7—H7 | 117.2 (11) | ||
O1—C9—C10—C11 | 173.70 (17) | C5—C6—C7—O2 | −151.82 (15) |
O1—C9—C10—C15 | −7.5 (2) | C5—C6—C7—C8 | 140.25 (17) |
O2—C7—C8—C9 | 102.02 (17) | C6—C1—C2—C3 | −0.3 (3) |
O2—C8—C9—O1 | 29.4 (2) | C6—C7—C8—O2 | 103.45 (18) |
O2—C8—C9—C10 | −148.64 (14) | C6—C7—C8—C9 | −154.53 (16) |
O3—N1—C4—C3 | −173.69 (19) | C7—O2—C8—C9 | −109.74 (16) |
O3—N1—C4—C5 | 7.2 (3) | C7—C8—C9—O1 | −36.7 (2) |
O4—N1—C4—C3 | 7.3 (3) | C7—C8—C9—C10 | 145.30 (17) |
O4—N1—C4—C5 | −171.84 (18) | C8—O2—C7—C6 | −111.82 (17) |
N1—C4—C5—C6 | 178.22 (17) | C8—C9—C10—C11 | −8.3 (2) |
C1—C2—C3—C4 | 0.7 (3) | C8—C9—C10—C15 | 170.47 (16) |
C1—C6—C7—O2 | 27.6 (2) | C9—C10—C11—C12 | 178.49 (17) |
C1—C6—C7—C8 | −40.4 (3) | C9—C10—C15—C14 | −177.84 (17) |
C2—C1—C6—C5 | −0.7 (3) | C10—C11—C12—C13 | −0.9 (3) |
C2—C1—C6—C7 | 179.91 (18) | C11—C10—C15—C14 | 1.0 (3) |
C2—C3—C4—N1 | −179.20 (17) | C11—C12—C13—C14 | 1.3 (3) |
C2—C3—C4—C5 | −0.1 (3) | C12—C13—C14—C15 | −0.6 (3) |
C3—C4—C5—C6 | −0.8 (3) | C13—C14—C15—C10 | −0.6 (3) |
C4—C5—C6—C1 | 1.2 (3) | C15—C10—C11—C12 | −0.3 (3) |
C4—C5—C6—C7 | −179.36 (16) |
D—H···A | D—H | H···A | D···A | D—H···A |
C5—H5···O1i | 0.94 (1) | 2.35 (1) | 3.209 (2) | 151 (1) |
C8—H8···O4ii | 0.96 (2) | 2.49 (2) | 3.401 (2) | 158 (2) |
C15—H15···O3iii | 1.00 (1) | 2.51 (2) | 3.411 (2) | 150 (1) |
Symmetry codes: (i) x−1/2, −y+1/2, −z+1; (ii) −x+1, y+1/2, −z+3/2; (iii) x+1/2, −y+1/2, −z+1. |
Plane A: mean plane of the m-nitrophenyl benzene ring; plane B: oxirane ring; plane C: mean plane of the benzoyl benzene ring. |
Planes | monoclinic polymorph | orthorhombic polymorph |
A/B | 99.78 (3) | 97.97 (10) |
A/C | 102.36 (3) | 66.21 (6) |
B/C | 55.53 (5) | 75.54 (10) |
Acknowledgements
Financial support from the State University of New York for acquisition and maintenance of the X-ray diffractometer is gratefully acknowledged.
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