research communications
Ethyl 2-(4-methoxyphenyl)-6-oxa-3-azabicyclo[3.1.0]hexane-3-carboxylate:
and Hirshfeld analysisaDepartmento de Química, Universidade Federal de São Carlos, 13565-905 São Carlos, São Paulo, Brazil, bInstituto de Química, Universidade Estadual de Campinas, UNICAMP, CP 6154, 13084-971, Campinas, São Paulo, Brazil, cDepartment of Physics, Bhavan's Sheth R. A. College of Science, Ahmedabad, Gujarat 380001, India, and dCentre for Crystalline Materials, School of Science and Technology, Sunway University, 47500 Bandar Sunway, Selangor Darul Ehsan, Malaysia
*Correspondence e-mail: julio@power.ufscar.br
The title compound, C14H17NO4, features an epoxide-O atom fused to a pyrrolidyl ring, the latter having an with the N atom being the flap. The 4-methoxyphenyl group is orthogonal to [dihedral angle = 85.02 (6)°] and lies to the opposite side of the five-membered ring to the epoxide O atom, while the N-bound ethyl ester group (r.m.s. deviation of the five fitted atoms = 0.0187 Å) is twisted with respect to the ring [dihedral angle = 17.23 (9)°]. The most prominent interactions in the crystal are of the type methine-C—H⋯O(carbonyl) and these lead to the formation of linear supramolecular chains along the c axis; weak benzene-C—H⋯O(epoxide) and methine-C—H⋯O(methoxy) interactions connect these into a three-dimensional architecture. The analysis of the Hirshfeld surface confirms the presence of C—H⋯O interactions in the crystal, but also the dominance of H⋯H dispersion contacts.
Keywords: crystal structure; pyrrolidyl; epoxide; Hirshfeld surface analysis.
CCDC reference: 1560463
1. Chemical context
α-Glucosidase inhibitors have shown potential for the treatment of several health conditions such as cystic fibrosis, diabetes, influenza and cancer. In this context, a thorough patent review on α-glucosidase inhibitors was published recently (Brás et al., 2014). Among α-glucosidase inhibitors are a series of natural products including aminociclitols (I) and (II); see Scheme 1. The tri-hydroxyl-substituted compound (I) is found in several plants, e.g. Morus alba (Asano et al., 1994), Arachniodes standishii (Furukawa et al., 1985), Angylocalyx boutiqueanus (Nash et al., 1985a), Hyacinthoides non-scripta (Watson et al., 1997) among others, whereas the di-hydroxyl substituted compound (II) is found in the seeds of Castanospermum austral (Nash et al., 1985b).
In a search for an effective synthetic path, e.g. good yield, to obtain both (I) and (II), it was found that they could be prepared starting from a common epoxide intermediate (III), which in turn could be prepared (Garcia, 2008) from (IV) when subjected to a Prilezhaev epoxidation (Prilezhaev, 1909; Swern, 1949). Herein, the crystal and molecular structures of (III) are described, motivated by the desire to unambiguously establish the of the stereogenic centres. A further evaluation of the supramolecular association has been undertaken by analysing the Hirshfeld surface of (III).
2. Structural commentary
The molecular structure of (III), Fig. 1, comprises a pyrrolidyl ring fused to an epoxide O1 atom giving rise to a locally (mirror) symmetric fused-ring system. The nitrogen atom is connected to an ethyl ester group, with the carbonyl-O2 atom orientated towards the ring-methylene group. The pyrrolidyl ring is substituted in a 2-position by the 4-methoxyphenyl group. The conformation of the pyrrolidyl ring is an envelope with atom N1 being the flap atom and occupying a position syn to the epoxide-O1 atom. The dihedral angle between the fused three- and five-membered rings is 78.53 (10)°, indicating an almost orthogonal relationship. To a first approximation, the ethyl carboxylate group (r.m.s. deviation of the five non-hydrogen atoms = 0.0187 Å) is planar and forms a dihedral angle of 17.23 (9)° with the five-membered ring. The 4-methoxyphenyl substituent is also approximately planar with an r.m.s. deviation of 0.0274 Å for the eight fitted non-hydrogen atoms; the small twist of the methoxy group out of the plane of the benzene ring to which is connected, i.e. the C14—O4—C11—C12 torsion angle is 175.67 (18)°, is primarily responsible for the deviations from exact planarity. The orthogonal relationship between this plane and that through the pyrrolidyl ring is seen in the dihedral angle formed between them of 85.02 (6)°. Globally, the molecule has an extended planar region, comprising the pyrrolidyl ring and the ethyl ester residue with the epoxide O atom lying to one side of this plane and the 4-methoxyphenyl substituent to the other.
The , is S, S and R, respectively, with the centrosymmetric containing equal amounts of both enantiomers.
of each of the methine-C1–C3 atoms in the molecule illustrated in Fig. 13. Supramolecular features
The most prominent feature in the packing of (III) is the formation of a linear supramolecular chain sustained by methine-C—H⋯O(carbonyl) interactions, as illustrated in Fig. 2a. The chains are aligned along the c axis and interactions between them are weak benzene-C—H⋯O(epoxide) and methine-C—H⋯O(methoxy) contacts to sustain a three-dimensional architecture, Fig. 2b. Further insight into the molecular packing is provided by an analysis of the Hirshfeld surface below.
4. Hirshfeld surface analysis
The Hirshfeld surfaces calculated on the structure of (III) was conducted in accord with a recent publication (Zukerman-Schpector et al., 2017) and provides more insight into the intermolecular interactions present in the crystal.
The donor and acceptor of the C—H⋯O hydrogen bond instrumental for the formation of the supramolecular chain, i.e. between the methine-C—H2 and carboxylate-O2 atoms, are viewed as the bright-red spots near these atoms on the Hirshfeld surface mapped over dnorm in Fig. 3a and b. The bright-red spot, near methoxy-O4, and lighter spot, near methine-C3, and the diminutive red spot near methoxy-O4 and brighter spot near methylene-C4 in Fig. 3, are indicative of another C—H⋯O interaction (Table 1) and the short inter-atomic C⋯O/O⋯C contact (Table 2), respectively. On the Hirshfeld surface mapped over electrostatic potential in Fig. 4, the donors and acceptors of intermolecular interactions are represented by blue and red regions, respectively, corresponding to positive and negative electrostatic potentials near the respective atoms. The immediate environment about a reference molecule within Hirshfeld surfaces mapped over the electrostatic potential highlighting intermolecular C—H⋯O interactions and short inter-atomic O⋯H/H⋯O contacts (Table 2) is illustrated in Fig. 5.
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The overall two dimensional fingerprint plot, Fig. 6a, and those delineated into H⋯H, O⋯H/H⋯O and C⋯H/H⋯C contacts (McKinnon et al., 2007) are illustrated in Fig. 6b–d, respectively; the relative contributions from various contacts to the Hirshfeld surface are summarized in Table 3. The major contribution of 55.2% to the Hirshfeld surface is from inter-atomic H⋯H contacts, Fig. 6b, and is indicative of dispersive forces operating in the crystal. In the fingerprint plot delineated into O⋯H/H⋯O contacts, Fig. 6c, the 29.7% contribution results from the intermolecular C—H⋯O interactions and short inter-atomic O⋯H/H⋯O contacts, Tables 1 and 2. In the plot, Fig. 6c, a pair of spikes with their tips at de + di ∼2.4 Å (with label `1') indicate the most significant C—H⋯O interaction whereas the pair of two adjoining parabola with their peaks at around de + di ∼2.7 Å (label `2') represent short inter-atomic O⋯H/H⋯O contacts. The presence of the short inter-atomic C⋯H/H⋯C contact, Table 2, hitherto not mentioned, in Fig. 6d, leads to nearly symmetrical, characteristic wings with the pair of tips at de + di ∼2.9 Å as highlighted with label `3'. The low contributions from other contacts, Table 3, have a negligible effect on the packing as their inter-atomic distances are greater than sum of their respective van der Waals radii.
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5. Database survey
There are three structures in the crystallographic literature (Groom et al., 2016) having the basic framework shown at the top of Scheme 2, i.e. with non-specific bonds between the atoms. Each of the three structures retrieved from the search, i.e. (V), (VI) (Csatayová et al., 2015) and (VII) (Rives et al., 2010) in Scheme 2, has the same bonds in the framework. The common feature of (V)–(VII) is an for the pyrrolidyl ring with the flap atom being the N atom which is syn to the epoxide O1 atom, i.e. as for (III). Major conformational differences are evident, however. With reference to the pyrrolidyl ring, in (V) and (VI), in common with (III), the ring-bound substituents occupy positions opposite to that of the epoxide O atom but, in (VII), this substituent lies to the same side of the pyrrolidyl ring.
6. Synthesis and crystallization
The synthesis of (III) is as described in (Garcia, 2008). Crystals for the structure analysis were obtained by the slow evaporation of its CHCl3 solution. M. p. 378–379 K.
7. details
Crystal data, data collection and structure . The carbon-bound H atoms were placed in calculated positions (C—H = 0.93–0.98 Å) and were included in the in the riding model approximation, with Uiso(H) set to 1.2–1.5Uequiv(C).
details are summarized in Table 4Supporting information
CCDC reference: 1560463
https://doi.org/10.1107/S2056989017009987/hb7690sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S2056989017009987/hb7690Isup2.hkl
Supporting information file. DOI: https://doi.org/10.1107/S2056989017009987/hb7690Isup3.cml
Data collection: CAD-4 EXPRESS (Enraf–Nonius, 1989); cell
CAD-4 EXPRESS (Enraf–Nonius, 1989); data reduction: XCAD4 (Harms & Wocadlo, 1995); program(s) used to solve structure: SIR2014 (Burla et al., 2015); program(s) used to refine structure: SHELXL2014 (Sheldrick, 2015); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012) and DIAMOND (Brandenburg, 2006); software used to prepare material for publication: MarvinSketch (ChemAxon, 2010) and publCIF (Westrip, 2010).C14H17NO4 | F(000) = 560 |
Mr = 263.28 | Dx = 1.290 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
a = 9.6467 (9) Å | Cell parameters from 25 reflections |
b = 18.408 (1) Å | θ = 11.0–13.6° |
c = 7.8076 (6) Å | µ = 0.10 mm−1 |
β = 102.071 (8)° | T = 293 K |
V = 1355.79 (18) Å3 | Irregular, colourless |
Z = 4 | 0.30 × 0.27 × 0.11 mm |
Enraf–Nonius TurboCAD-4 diffractometer | Rint = 0.028 |
non–profiled ω/2τ scans | θmax = 30.0°, θmin = 2.2° |
Absorption correction: ψ scan (Blessing, 1995) | h = −13→13 |
Tmin = 0.933, Tmax = 0.990 | k = −25→0 |
4187 measured reflections | l = −10→0 |
3927 independent reflections | 3 standard reflections every 60 min |
2107 reflections with I > 2σ(I) | intensity decay: 1% |
Refinement on F2 | 0 restraints |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.049 | H-atom parameters constrained |
wR(F2) = 0.147 | w = 1/[σ2(Fo2) + (0.0677P)2 + 0.1423P] where P = (Fo2 + 2Fc2)/3 |
S = 1.00 | (Δ/σ)max < 0.001 |
3927 reflections | Δρmax = 0.17 e Å−3 |
174 parameters | Δρmin = −0.23 e Å−3 |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
x | y | z | Uiso*/Ueq | ||
O1 | −0.19247 (14) | 0.42020 (8) | −0.03045 (18) | 0.0678 (4) | |
O2 | −0.03454 (14) | 0.36201 (7) | 0.53678 (14) | 0.0565 (3) | |
O3 | 0.13930 (13) | 0.42869 (6) | 0.45731 (15) | 0.0544 (3) | |
O4 | 0.56099 (13) | 0.25574 (8) | 0.0389 (2) | 0.0734 (4) | |
N1 | −0.01106 (14) | 0.36816 (7) | 0.25447 (16) | 0.0467 (3) | |
C1 | 0.05665 (17) | 0.39804 (9) | 0.1171 (2) | 0.0456 (4) | |
H1 | 0.0760 | 0.4499 | 0.1378 | 0.055* | |
C2 | −0.05889 (19) | 0.38771 (10) | −0.0450 (2) | 0.0518 (4) | |
H2 | −0.0341 | 0.3834 | −0.1601 | 0.062* | |
C3 | −0.17188 (18) | 0.34308 (11) | −0.0031 (2) | 0.0548 (4) | |
H3 | −0.2228 | 0.3085 | −0.0893 | 0.066* | |
C4 | −0.13558 (18) | 0.32331 (10) | 0.1864 (2) | 0.0513 (4) | |
H4A | −0.2129 | 0.3349 | 0.2438 | 0.062* | |
H4B | −0.1134 | 0.2720 | 0.2019 | 0.062* | |
C5 | 0.02590 (17) | 0.38465 (9) | 0.4251 (2) | 0.0438 (4) | |
C6 | 0.1888 (2) | 0.45044 (11) | 0.6374 (2) | 0.0621 (5) | |
H6A | 0.2115 | 0.4081 | 0.7119 | 0.075* | |
H6B | 0.1163 | 0.4783 | 0.6776 | 0.075* | |
C7 | 0.3173 (3) | 0.49553 (15) | 0.6432 (4) | 0.0945 (8) | |
H7A | 0.3893 | 0.4668 | 0.6074 | 0.142* | |
H7B | 0.3517 | 0.5128 | 0.7605 | 0.142* | |
H7C | 0.2941 | 0.5362 | 0.5656 | 0.142* | |
C8 | 0.19086 (17) | 0.35884 (9) | 0.10017 (19) | 0.0439 (4) | |
C9 | 0.19617 (19) | 0.28404 (10) | 0.0936 (3) | 0.0601 (5) | |
H9 | 0.1162 | 0.2574 | 0.1031 | 0.072* | |
C10 | 0.31680 (19) | 0.24737 (11) | 0.0733 (3) | 0.0605 (5) | |
H10 | 0.3177 | 0.1969 | 0.0697 | 0.073* | |
C11 | 0.43576 (17) | 0.28635 (10) | 0.0583 (2) | 0.0528 (4) | |
C12 | 0.43222 (19) | 0.36132 (10) | 0.0623 (3) | 0.0594 (5) | |
H12 | 0.5117 | 0.3878 | 0.0498 | 0.071* | |
C13 | 0.31168 (18) | 0.39740 (10) | 0.0846 (2) | 0.0529 (4) | |
H13 | 0.3113 | 0.4479 | 0.0893 | 0.063* | |
C14 | 0.5733 (2) | 0.17891 (12) | 0.0463 (3) | 0.0757 (6) | |
H14A | 0.5536 | 0.1618 | 0.1548 | 0.114* | |
H14B | 0.6678 | 0.1651 | 0.0388 | 0.114* | |
H14C | 0.5069 | 0.1579 | −0.0497 | 0.114* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.0615 (8) | 0.0775 (10) | 0.0667 (8) | 0.0171 (7) | 0.0183 (6) | 0.0127 (7) |
O2 | 0.0670 (8) | 0.0661 (8) | 0.0413 (6) | −0.0002 (6) | 0.0225 (5) | 0.0039 (6) |
O3 | 0.0607 (7) | 0.0603 (7) | 0.0425 (6) | −0.0093 (6) | 0.0113 (5) | −0.0074 (5) |
O4 | 0.0470 (7) | 0.0723 (9) | 0.1044 (11) | −0.0043 (7) | 0.0235 (7) | −0.0145 (8) |
N1 | 0.0513 (8) | 0.0550 (8) | 0.0367 (6) | −0.0106 (6) | 0.0160 (5) | −0.0021 (6) |
C1 | 0.0540 (9) | 0.0467 (9) | 0.0398 (8) | −0.0054 (7) | 0.0184 (7) | 0.0018 (7) |
C2 | 0.0551 (10) | 0.0630 (11) | 0.0397 (8) | 0.0063 (8) | 0.0150 (7) | 0.0046 (7) |
C3 | 0.0493 (9) | 0.0694 (12) | 0.0464 (9) | 0.0004 (8) | 0.0111 (7) | −0.0061 (8) |
C4 | 0.0492 (9) | 0.0586 (10) | 0.0490 (9) | −0.0081 (8) | 0.0170 (7) | −0.0026 (8) |
C5 | 0.0491 (9) | 0.0430 (8) | 0.0409 (8) | 0.0047 (7) | 0.0130 (7) | 0.0008 (6) |
C6 | 0.0721 (12) | 0.0627 (12) | 0.0483 (10) | −0.0001 (10) | 0.0052 (9) | −0.0143 (9) |
C7 | 0.0973 (19) | 0.0905 (18) | 0.0904 (17) | −0.0297 (14) | 0.0075 (14) | −0.0280 (14) |
C8 | 0.0470 (8) | 0.0495 (9) | 0.0368 (7) | −0.0076 (7) | 0.0122 (6) | −0.0006 (7) |
C9 | 0.0517 (10) | 0.0525 (11) | 0.0820 (13) | −0.0152 (8) | 0.0277 (9) | −0.0069 (9) |
C10 | 0.0560 (10) | 0.0479 (10) | 0.0829 (14) | −0.0100 (8) | 0.0263 (9) | −0.0104 (9) |
C11 | 0.0453 (9) | 0.0609 (11) | 0.0523 (9) | −0.0071 (8) | 0.0103 (7) | −0.0104 (8) |
C12 | 0.0443 (9) | 0.0613 (11) | 0.0734 (12) | −0.0166 (8) | 0.0139 (8) | −0.0026 (9) |
C13 | 0.0513 (10) | 0.0486 (10) | 0.0587 (10) | −0.0105 (8) | 0.0111 (8) | 0.0003 (8) |
C14 | 0.0633 (12) | 0.0743 (14) | 0.0884 (15) | 0.0086 (11) | 0.0131 (11) | −0.0168 (12) |
O1—C3 | 1.443 (2) | C6—C7 | 1.485 (3) |
O1—C2 | 1.447 (2) | C6—H6A | 0.9700 |
O2—C5 | 1.2189 (18) | C6—H6B | 0.9700 |
O3—C5 | 1.342 (2) | C7—H7A | 0.9600 |
O3—C6 | 1.444 (2) | C7—H7B | 0.9600 |
O4—C11 | 1.370 (2) | C7—H7C | 0.9600 |
O4—C14 | 1.419 (3) | C8—C9 | 1.379 (2) |
N1—C5 | 1.340 (2) | C8—C13 | 1.391 (2) |
N1—C4 | 1.463 (2) | C9—C10 | 1.383 (2) |
N1—C1 | 1.4739 (19) | C9—H9 | 0.9300 |
C1—C8 | 1.512 (2) | C10—C11 | 1.379 (2) |
C1—C2 | 1.514 (2) | C10—H10 | 0.9300 |
C1—H1 | 0.9800 | C11—C12 | 1.381 (3) |
C2—C3 | 1.456 (2) | C12—C13 | 1.381 (3) |
C2—H2 | 0.9800 | C12—H12 | 0.9300 |
C3—C4 | 1.493 (2) | C13—H13 | 0.9300 |
C3—H3 | 0.9800 | C14—H14A | 0.9600 |
C4—H4A | 0.9700 | C14—H14B | 0.9600 |
C4—H4B | 0.9700 | C14—H14C | 0.9600 |
C3—O1—C2 | 60.50 (11) | C7—C6—H6A | 110.4 |
C5—O3—C6 | 116.11 (13) | O3—C6—H6B | 110.4 |
C11—O4—C14 | 118.28 (15) | C7—C6—H6B | 110.4 |
C5—N1—C4 | 121.09 (13) | H6A—C6—H6B | 108.6 |
C5—N1—C1 | 124.94 (14) | C6—C7—H7A | 109.5 |
C4—N1—C1 | 113.68 (12) | C6—C7—H7B | 109.5 |
N1—C1—C8 | 113.79 (13) | H7A—C7—H7B | 109.5 |
N1—C1—C2 | 101.59 (13) | C6—C7—H7C | 109.5 |
C8—C1—C2 | 111.17 (13) | H7A—C7—H7C | 109.5 |
N1—C1—H1 | 110.0 | H7B—C7—H7C | 109.5 |
C8—C1—H1 | 110.0 | C9—C8—C13 | 117.89 (16) |
C2—C1—H1 | 110.0 | C9—C8—C1 | 121.25 (14) |
O1—C2—C3 | 59.63 (11) | C13—C8—C1 | 120.82 (15) |
O1—C2—C1 | 113.23 (14) | C8—C9—C10 | 122.02 (16) |
C3—C2—C1 | 109.74 (14) | C8—C9—H9 | 119.0 |
O1—C2—H2 | 119.9 | C10—C9—H9 | 119.0 |
C3—C2—H2 | 119.9 | C11—C10—C9 | 119.40 (18) |
C1—C2—H2 | 119.9 | C11—C10—H10 | 120.3 |
O1—C3—C2 | 59.87 (11) | C9—C10—H10 | 120.3 |
O1—C3—C4 | 112.52 (15) | O4—C11—C10 | 124.34 (17) |
C2—C3—C4 | 109.22 (14) | O4—C11—C12 | 116.11 (15) |
O1—C3—H3 | 120.2 | C10—C11—C12 | 119.55 (17) |
C2—C3—H3 | 120.2 | C11—C12—C13 | 120.58 (16) |
C4—C3—H3 | 120.2 | C11—C12—H12 | 119.7 |
N1—C4—C3 | 103.12 (13) | C13—C12—H12 | 119.7 |
N1—C4—H4A | 111.1 | C12—C13—C8 | 120.55 (17) |
C3—C4—H4A | 111.1 | C12—C13—H13 | 119.7 |
N1—C4—H4B | 111.1 | C8—C13—H13 | 119.7 |
C3—C4—H4B | 111.1 | O4—C14—H14A | 109.5 |
H4A—C4—H4B | 109.1 | O4—C14—H14B | 109.5 |
O2—C5—N1 | 124.47 (16) | H14A—C14—H14B | 109.5 |
O2—C5—O3 | 124.44 (15) | O4—C14—H14C | 109.5 |
N1—C5—O3 | 111.09 (13) | H14A—C14—H14C | 109.5 |
O3—C6—C7 | 106.77 (17) | H14B—C14—H14C | 109.5 |
O3—C6—H6A | 110.4 | ||
C5—N1—C1—C8 | 83.1 (2) | C1—N1—C5—O3 | −4.0 (2) |
C4—N1—C1—C8 | −103.11 (16) | C6—O3—C5—O2 | −1.0 (2) |
C5—N1—C1—C2 | −157.38 (15) | C6—O3—C5—N1 | 179.79 (14) |
C4—N1—C1—C2 | 16.45 (18) | C5—O3—C6—C7 | 177.42 (17) |
C3—O1—C2—C1 | −100.05 (16) | N1—C1—C8—C9 | 47.4 (2) |
N1—C1—C2—O1 | 54.73 (17) | C2—C1—C8—C9 | −66.5 (2) |
C8—C1—C2—O1 | 176.13 (13) | N1—C1—C8—C13 | −134.82 (15) |
N1—C1—C2—C3 | −9.78 (18) | C2—C1—C8—C13 | 111.22 (17) |
C8—C1—C2—C3 | 111.62 (15) | C13—C8—C9—C10 | 0.4 (3) |
C2—O1—C3—C4 | 99.87 (16) | C1—C8—C9—C10 | 178.17 (16) |
C1—C2—C3—O1 | 105.99 (15) | C8—C9—C10—C11 | −0.3 (3) |
O1—C2—C3—C4 | −105.47 (16) | C14—O4—C11—C10 | −4.4 (3) |
C1—C2—C3—C4 | 0.5 (2) | C14—O4—C11—C12 | 175.67 (18) |
C5—N1—C4—C3 | 157.71 (15) | C9—C10—C11—O4 | 179.54 (18) |
C1—N1—C4—C3 | −16.38 (18) | C9—C10—C11—C12 | −0.6 (3) |
O1—C3—C4—N1 | −55.38 (17) | O4—C11—C12—C13 | −178.80 (16) |
C2—C3—C4—N1 | 9.10 (19) | C10—C11—C12—C13 | 1.3 (3) |
C4—N1—C5—O2 | 3.4 (3) | C11—C12—C13—C8 | −1.2 (3) |
C1—N1—C5—O2 | 176.78 (15) | C9—C8—C13—C12 | 0.4 (3) |
C4—N1—C5—O3 | −177.35 (14) | C1—C8—C13—C12 | −177.45 (15) |
D—H···A | D—H | H···A | D···A | D—H···A |
C2—H2···O2i | 0.98 | 2.40 | 3.3559 (19) | 165 |
C13—H13···O1ii | 0.93 | 2.68 | 3.456 (2) | 155 |
C3—H3···O4iii | 0.98 | 2.68 | 3.311 (2) | 107 |
Symmetry codes: (i) x, y, z−1; (ii) −x, −y+1, −z; (iii) x−1, y, z. |
Contact | Distance | Symmetry operation |
C4···O4 | 3.167 (2) | -1 + x, y, z |
O2···H9 | 2.63 | x, 1/2 - y, - 1/2 + z |
C13···H6A | 2.87 | x, y, - 1 + z |
Contact | Percentage contribution |
H···H | 55.2 |
O···H/H···O | 29.7 |
C···H/H···C | 13.0 |
C···C | 1.1 |
N···H/H···N | 0.5 |
C···O/O···C | 0.4 |
O···O | 0.1 |
Footnotes
‡Additional correspondence author, e-mail: edwardt@sunway.edu.my.
Funding information
The support of the Brazilian agency, the National Council for Scientific and Technological Development (CNPq), for a fellowship to JZ-S (305626/2013–2) and a scholarship to FHS (121613/2016–0) is gratefully acknowledged.
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