research communications
and UV spectra of a 1,2-disubstituted benzimidazolium chloride
aDepartment of Chemistry, Indian Institute of Technology Bombay, Mumbai 400 076, India
*Correspondence e-mail: tuhin@chem.iitb.ac.in
1-(2-Hydroxybenzyl)-2-(2-hydroxyphenyl)-1H-benzimidazol-3-ium chloride, C20H17N2O2+·Cl−, was prepared by reaction of salicylaldehyde with o-phenylenediamine in the presence of trimethylsilyl chloride acting as a source of HCl. As a result of the cation in the crystal is far from planar: the benzimidazole ring system makes dihedral angles of 55.49 (9) and 81.36 (8)° with the planes of the phenolic groups. The crystal packing is dominated by O—H⋯Cl and N—H⋯Cl hydrogen bonds, which link the cations and anions into four-membered rings and then into chains along [100]. The title compound exhibits two transitions in the UV region, which are revealed in the solid state and solution spectra as an absorption maximum at 280 nm and a shoulder at 320 nm. According to the results of TD–DFT calculation, both transitions have a π–π* nature and the molecular orbitals involved in these transitions are mostly localized on the benzimidazole ring system and on the phenyl ring attached to it at the 2-position.
Keywords: crystal structure; benzimidazole; hydrogen bonding; Hirshfeld surface analysis; DFT calculations; UV spectra.
CCDC reference: 1548944
1. Chemical context
Benzimidazole derivatives are well known to exhibit antibacterial, antimalarial and anti-inflammatory properties (Keri et al., 2015; Carvalho et al., 2011). Besides this, 1,2-disubstituted benzimidazoles are used as intermediates in synthesis of dyes and pigments (Carvalho et al., 2011). Some substituted benzimidazoles, e.g. 2-(2′-hydroxyphenyl)benzimidazole and its derivatives, are strongly fluorescent and show dual emission due to the proton transfer (Douhal et al., 1994). In the solid state, these compounds exhibit fluorescence, which is governed by their and steric effects (Konoshima et al., 2012; Benelhadj et al., 2013; Shida et al., 2013). Thus, this class of compounds is considered for applications in fluorescence imaging and optoelectronics (Zhao et al., 2011). Benzimidazolium salts attract attention due to their non-linear optical properties (Sun et al., 2011; Wang et al., 2011). 2-(2′-Hydroxyphenyl)benzimidazole, which is a member of this class of compounds, exhibits rotamerism (Ríos Vazquez et al., 2008). In this work, the of 1-(2-hydroxybenzyl)-2-(2-hydroxyphenyl)-1H-benzimidazol-3-ium chloride and its UV spectra have been reported. DFT calculations were carried out to study the geometry and electronic transitions.
2. Structural commentary
All bond lengths and bond angles are within the ranges reported for similar structures (Ha, 2012). The consisting of a 1-(2-hydroxybenzyl)-2-(2-hydroxyphenyl)-1H-benzo[d]imidazol-3-ium cation and a chloride anion, is presented in Fig. 1. As a result of the cation is far from planar: the benzimidazole ring system makes dihedral angles of 55.49 (9) and 81.36 (8)° with the planes of phenolic groups immediately attached to it at position 2 and linked via the methylene bridge to position 1, respectively. The deviation from planarity in the 2-(2-hydroxyphenyl)benzimidazolium skeleton is larger than in the reported similar structures (Al-Douh et al., 2009b; Wang et al., 2011).
3. Supramolecular features
In the crystal, each cation forms three hydrogen bonds, two O—H⋯Cl and one N—H⋯Cl (Table 1), to chloride anions. As a result of these interactions, the cations and anions form ribbons along [100], which consist of centrosymmetric four-membered rings each formed by two cations and two anions in the R42(16) and R42(20) manner, as shown in Fig. 2. Some weak contacts C—H⋯O, C—H⋯Cl and C—H⋯π are also present (Table 1).
4. Hirshfeld surface analysis
To evaluate the effect of close range interactions and compare their significance, Hirshfeld surface analysis (Spackman & Jayatilaka, 2009; Soman et al., 2014) has been performed and its results are presented in Fig. 3. Four red spots on the Hirshfeld surface indicate short contacts. All close interactions are mediated by Cl− anions. The H⋯H and C⋯H interactions are associated with 46% and 26% surface area, respectively. The contributions of the Cl⋯H (15%) and O⋯H (6%) interactions are smaller, but significant for the crystal architecture.
5. Quantum chemical calculation
The geometry of the cation–anion pair in the gas phase was optimized with density functional theory (DFT) using GAUSSIAN09 package (Frisch et al., 2009) within the framework of B3LYP/6-31G(d). Frequency calculations were carried out to confirm that the structure corresponds to a minimum. The optimized bond lengths agree with those observed in the within the range of 0.04 Å (Table 2). The largest distinction between the calculated and crystallographic geometries is related to the twist of the phenolic group attached to the benzimidazole ring system at position 2: in the crystal, the corresponding torsion angles are by 7–14° nearer to 180° than the calculated values (Table 2). This could be due to the hydrogen-bonding and C—H⋯π interactions. The ionic nature of the optimized cation–anion pair is reflected in the large calculated of 18.05 D. The time-dependent DFT (TD–DFT) calculation was performed on the crystal geometry at the same level of theory as for geometry optimization.
|
6. UV spectra
The solid-state diffuse reflectance spectrum was measured with a Shimadzu-3600 spectrophotometer fitted with an MPC-3100 sample compartment. For that, the crystals were crushed to powder and mixed with BaSO4 to a final concentration of 5% (v/v). The Kubelka–Munk transformation (Kubelka & Munk, 1931) was applied to the reflectance data. The spectrum of methanol solution was measured with JASCO V530 spectrophotometer. The solid-state spectrum closely resembles the spectrum of the solution, thus indicating that the geometry and electronic structure of the cation did not change in moving from solid state to solution. In the UV region, the title compound exhibits an absorption maximum at 280 nm and a shoulder around 320 nm (Fig. 4a). The absorption maximum at 280 nm is typical of benzimidazole (Hirayama, 1967), and the 320 nm shoulder is typical of benzimidazole derivatives (Mosquera et al., 1996; Konoshima et al., 2012). The Kubelka–Munk transformed spectrum of the solid sample is quite close to that of a structurally similar derivative reported earlier (Shida et al., 2013). The positions and intensities of calculated transitions agree well with the experimental data (Fig. 4a, Table 3). The transition at 277 nm is found to have the π–π* nature. The associated molecular orbitals (HOMO-5 and LUMO) are spread over benzimidazole and 2-phenyl group (Fig. 4b, Table 3). On the other hand, HOMO-3 is localized on 2-phenyl group, making the transitions at 356 nm partially charge-transfer in nature.
|
7. Database survey
A survey of Cambridge Structure Database (CSD version 5.36, November 2016) (Groom et al., 2016) for molecules with the 2-[1-(2-hydroxybenzyl)-1H-benzo[d]imidazol-2-yl]phenol skeleton gave 18 hits. All of them are neutral molecules. Among them are an o-methylated derivative of the title compound (VIRZEC; Tarte et al., 2007), an o-ethoxy derivative (ZARFEF; Ha) , o-methoxy derivatives (VOQVAZ and VOQRUP; Al-Douh et al., 2009a and Ha, 2012, respectively). Halide derivatives (CIQQOJ, NEGRIB) have also been reported (Fang et al., 2007; Yang et al., 2006). A search for protonated molecules containing the 1-benzyl-2-phenyl-1H-benzo[d]imidazol-3-ium skeleton gave 11 hits, three of which being closely related to this work are reported in the same article (EBOHOU, EBOHUA and EBOJAI; Wang et al., 2011).
8. Synthesis and crystallization
Salicylaldehyde (SD Fine Chemicals, Mumbai, India), o-phenylenediamine (Sigma– Aldrich, USA) and trimethylsilyl chloride (Sigma–Aldrich, USA) were used as received. The title compound was synthesized by the reaction of o-phenylenediamine (1 g) with salicylaldehyde (1:2 mole ratio) in double distilled water at 363 K using trimethylsilyl chloride as catalyst (1:1 molar ratio with respect to o-phenylenediamine) for 8–10 h (Wan et al., 2009). The reaction mixture was cooled to room temperature, and the white precipitate was filtered off, washed with water, dried by pressing against filter paper and allowed to dry at ambient conditions over a few days. Unexpectedly, the product turned out to be a salt, not a neutral compound, as prescribed by the literature synthetic procedure. It was crystallized from a solution in acetonitrile/methanol mixture (15:85) in a refrigerator and then at room temperature. The resulting plate-shaped crystals were used for single crystal XRD measurements. Even after repeated attempts with crude and recrystallized samples, a clean 1H NMR spectrum, which is an indication of rotamerism in solution, was not obtained. For the spectroscopic study, the parent solvent was decanted and then the crystals were washed with diethyl ether and finally air dried.
9. Refinement
Crystal data, data collection and structure . All H atoms were positioned geometrically (O—H = 0.84, N—H = 0.88, C—H = 0.95–0.99 Å)and refined using a riding model with Uiso(H) = 1.2Ueq(C,N) [1.5Ueq(O)]. OH groups were allowed to rotate about the C—bonds.
details are summarized in Table 4
|
Supporting information
CCDC reference: 1548944
https://doi.org/10.1107/S205698901700977X/yk2108sup1.cif
contains datablock I. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S205698901700977X/yk2108Isup2.hkl
Supporting information file. DOI: https://doi.org/10.1107/S205698901700977X/yk2108Isup3.cml
Data collection: CrysAlis PRO (Rigaku Oxford Diffraction, 2015); cell
CrysAlis PRO (Rigaku Oxford Diffraction, 2015); data reduction: CrysAlis PRO (Rigaku Oxford Diffraction, 2015); program(s) used to solve structure: SHELXT (Sheldrick, 2015a); program(s) used to refine structure: SHELXL2014 (Sheldrick, 2015b); molecular graphics: OLEX2 (Dolomanov et al., 2009); software used to prepare material for publication: OLEX2 (Dolomanov et al., 2009).C20H17N2O2+·Cl− | Z = 2 |
Mr = 352.80 | F(000) = 368 |
Triclinic, P1 | Dx = 1.315 Mg m−3 |
a = 9.8002 (4) Å | Mo Kα radiation, λ = 0.71073 Å |
b = 10.6791 (5) Å | Cell parameters from 5921 reflections |
c = 10.6986 (4) Å | θ = 2.3–31.1° |
α = 111.364 (4)° | µ = 0.23 mm−1 |
β = 102.346 (3)° | T = 150 K |
γ = 111.311 (4)° | Plate, colourless |
V = 890.75 (7) Å3 | 0.19 × 0.18 × 0.12 mm |
Rigaku Saturn 724 diffractometer | 3114 independent reflections |
Radiation source: fine-focus sealed X-ray tube, Enhance (Mo) X-ray Source | 2654 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.033 |
ω scans | θmax = 25.0°, θmin = 2.3° |
Absorption correction: multi-scan (CrysAlis PRO; Rigaku Oxford Diffraction, 2015) | h = −11→10 |
Tmin = 0.657, Tmax = 1.000 | k = −12→12 |
8813 measured reflections | l = −11→12 |
Refinement on F2 | 0 restraints |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.039 | H-atom parameters constrained |
wR(F2) = 0.105 | w = 1/[σ2(Fo2) + (0.0483P)2 + 0.2976P] where P = (Fo2 + 2Fc2)/3 |
S = 1.04 | (Δ/σ)max = 0.001 |
3114 reflections | Δρmax = 0.25 e Å−3 |
228 parameters | Δρmin = −0.21 e Å−3 |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. 1. Fixed Uiso At 1.2 times of: All C(H) groups, All C(H,H) groups, All N(H) groups At 1.5 times of: All O(H) groups 2.a Secondary CH2 refined with riding coordinates: C7(H7A,H7B) 2.b Aromatic/amide H refined with riding coordinates: N2(H2A), C2(H2B), C3(H3), C4(H4), C5(H5), C9(H9), C10(H10), C11(H11), C12(H12), C16(H16), C17(H17), C18(H18), C19(H19) 2.c Idealised tetrahedral OH refined as rotating group: O1(H1), O2(H2) |
x | y | z | Uiso*/Ueq | ||
Cl1 | −0.06343 (6) | 0.67366 (6) | 0.86942 (5) | 0.04152 (17) | |
O1 | 0.57838 (18) | 0.45573 (18) | 0.75661 (16) | 0.0457 (4) | |
H1 | 0.6774 | 0.5046 | 0.7816 | 0.069* | |
O2 | 0.07420 (16) | 0.49890 (14) | 0.68652 (15) | 0.0381 (3) | |
H2 | 0.0365 | 0.5481 | 0.7349 | 0.057* | |
N1 | 0.23361 (18) | 0.29524 (16) | 0.60618 (15) | 0.0302 (3) | |
N2 | 0.18508 (19) | 0.27540 (17) | 0.38883 (16) | 0.0337 (4) | |
H2A | 0.1727 | 0.2994 | 0.3183 | 0.040* | |
C7 | 0.2833 (2) | 0.3651 (2) | 0.76670 (19) | 0.0325 (4) | |
H7A | 0.1877 | 0.3293 | 0.7888 | 0.039* | |
H7B | 0.3331 | 0.4783 | 0.8101 | 0.039* | |
C1 | 0.5475 (2) | 0.3725 (2) | 0.8279 (2) | 0.0355 (4) | |
C2 | 0.6572 (3) | 0.3358 (2) | 0.8901 (2) | 0.0428 (5) | |
H2B | 0.7577 | 0.3671 | 0.8826 | 0.051* | |
C3 | 0.6179 (3) | 0.2535 (2) | 0.9626 (2) | 0.0467 (5) | |
H3 | 0.6913 | 0.2262 | 1.0033 | 0.056* | |
C4 | 0.4745 (3) | 0.2105 (2) | 0.9770 (2) | 0.0467 (5) | |
H4 | 0.4506 | 0.1571 | 1.0303 | 0.056* | |
C5 | 0.3645 (3) | 0.2453 (2) | 0.9129 (2) | 0.0400 (5) | |
H5 | 0.2647 | 0.2148 | 0.9217 | 0.048* | |
C6 | 0.3999 (2) | 0.3248 (2) | 0.83576 (18) | 0.0325 (4) | |
C8 | 0.1953 (2) | 0.1454 (2) | 0.50925 (19) | 0.0321 (4) | |
C9 | 0.1862 (2) | 0.0217 (2) | 0.5291 (2) | 0.0380 (5) | |
H9 | 0.2058 | 0.0277 | 0.6225 | 0.046* | |
C10 | 0.1472 (3) | −0.1105 (2) | 0.4064 (2) | 0.0428 (5) | |
H10 | 0.1417 | −0.1968 | 0.4163 | 0.051* | |
C11 | 0.1156 (3) | −0.1214 (2) | 0.2682 (2) | 0.0422 (5) | |
H11 | 0.0886 | −0.2150 | 0.1867 | 0.051* | |
C12 | 0.1225 (2) | −0.0002 (2) | 0.2470 (2) | 0.0384 (5) | |
H12 | 0.0995 | −0.0078 | 0.1528 | 0.046* | |
C13 | 0.1650 (2) | 0.1346 (2) | 0.3711 (2) | 0.0333 (4) | |
C14 | 0.2263 (2) | 0.3700 (2) | 0.52966 (19) | 0.0309 (4) | |
C15 | 0.2661 (2) | 0.5309 (2) | 0.58492 (19) | 0.0319 (4) | |
C16 | 0.3810 (2) | 0.6224 (2) | 0.5524 (2) | 0.0385 (5) | |
H16 | 0.4303 | 0.5785 | 0.4957 | 0.046* | |
C17 | 0.4234 (3) | 0.7744 (2) | 0.6010 (2) | 0.0428 (5) | |
H17 | 0.5025 | 0.8362 | 0.5796 | 0.051* | |
C18 | 0.3493 (3) | 0.8366 (2) | 0.6819 (2) | 0.0402 (5) | |
H18 | 0.3796 | 0.9423 | 0.7175 | 0.048* | |
C19 | 0.2325 (2) | 0.7481 (2) | 0.7116 (2) | 0.0356 (4) | |
H19 | 0.1812 | 0.7922 | 0.7651 | 0.043* | |
C20 | 0.1895 (2) | 0.5940 (2) | 0.66327 (19) | 0.0314 (4) |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cl1 | 0.0437 (3) | 0.0520 (3) | 0.0327 (3) | 0.0275 (3) | 0.0155 (2) | 0.0196 (2) |
O1 | 0.0415 (9) | 0.0639 (10) | 0.0441 (8) | 0.0290 (8) | 0.0202 (7) | 0.0329 (8) |
O2 | 0.0398 (8) | 0.0354 (7) | 0.0450 (8) | 0.0232 (7) | 0.0205 (7) | 0.0183 (6) |
N1 | 0.0339 (9) | 0.0275 (8) | 0.0257 (8) | 0.0183 (7) | 0.0072 (7) | 0.0089 (6) |
N2 | 0.0394 (10) | 0.0352 (8) | 0.0272 (8) | 0.0214 (8) | 0.0109 (7) | 0.0139 (7) |
C7 | 0.0370 (11) | 0.0326 (10) | 0.0250 (9) | 0.0199 (9) | 0.0095 (8) | 0.0099 (8) |
C1 | 0.0420 (12) | 0.0379 (10) | 0.0254 (9) | 0.0232 (9) | 0.0114 (9) | 0.0117 (8) |
C2 | 0.0449 (13) | 0.0488 (12) | 0.0330 (11) | 0.0305 (11) | 0.0106 (10) | 0.0131 (9) |
C3 | 0.0574 (15) | 0.0436 (12) | 0.0340 (11) | 0.0329 (11) | 0.0055 (10) | 0.0127 (10) |
C4 | 0.0639 (16) | 0.0346 (11) | 0.0321 (11) | 0.0226 (11) | 0.0068 (11) | 0.0154 (9) |
C5 | 0.0452 (13) | 0.0335 (10) | 0.0313 (10) | 0.0161 (9) | 0.0094 (9) | 0.0126 (9) |
C6 | 0.0401 (11) | 0.0295 (9) | 0.0217 (9) | 0.0192 (9) | 0.0073 (8) | 0.0070 (8) |
C8 | 0.0312 (11) | 0.0289 (9) | 0.0292 (10) | 0.0172 (8) | 0.0066 (8) | 0.0079 (8) |
C9 | 0.0400 (12) | 0.0343 (10) | 0.0343 (10) | 0.0206 (9) | 0.0074 (9) | 0.0131 (9) |
C10 | 0.0435 (13) | 0.0312 (10) | 0.0451 (12) | 0.0222 (10) | 0.0078 (10) | 0.0117 (9) |
C11 | 0.0391 (12) | 0.0329 (10) | 0.0366 (11) | 0.0190 (9) | 0.0069 (9) | 0.0027 (9) |
C12 | 0.0364 (12) | 0.0385 (11) | 0.0278 (10) | 0.0192 (9) | 0.0064 (9) | 0.0067 (8) |
C13 | 0.0291 (10) | 0.0337 (10) | 0.0317 (10) | 0.0178 (9) | 0.0079 (8) | 0.0106 (8) |
C14 | 0.0293 (10) | 0.0332 (10) | 0.0291 (9) | 0.0187 (8) | 0.0084 (8) | 0.0123 (8) |
C15 | 0.0339 (11) | 0.0327 (10) | 0.0278 (9) | 0.0195 (9) | 0.0072 (8) | 0.0130 (8) |
C16 | 0.0437 (12) | 0.0436 (11) | 0.0380 (11) | 0.0276 (10) | 0.0184 (10) | 0.0216 (9) |
C17 | 0.0440 (13) | 0.0415 (11) | 0.0499 (12) | 0.0220 (10) | 0.0189 (11) | 0.0274 (10) |
C18 | 0.0467 (13) | 0.0311 (10) | 0.0404 (11) | 0.0203 (10) | 0.0094 (10) | 0.0181 (9) |
C19 | 0.0418 (12) | 0.0365 (10) | 0.0326 (10) | 0.0262 (10) | 0.0113 (9) | 0.0157 (9) |
C20 | 0.0313 (10) | 0.0340 (10) | 0.0278 (9) | 0.0178 (9) | 0.0073 (8) | 0.0145 (8) |
O1—H1 | 0.8400 | C5—C6 | 1.393 (3) |
O1—C1 | 1.365 (2) | C8—C9 | 1.388 (3) |
O2—H2 | 0.8400 | C8—C13 | 1.396 (3) |
O2—C20 | 1.356 (2) | C9—H9 | 0.9500 |
N1—C7 | 1.479 (2) | C9—C10 | 1.380 (3) |
N1—C8 | 1.402 (2) | C10—H10 | 0.9500 |
N1—C14 | 1.344 (2) | C10—C11 | 1.396 (3) |
N2—H2A | 0.8800 | C11—H11 | 0.9500 |
N2—C13 | 1.378 (2) | C11—C12 | 1.374 (3) |
N2—C14 | 1.337 (2) | C12—H12 | 0.9500 |
C7—H7A | 0.9900 | C12—C13 | 1.394 (2) |
C7—H7B | 0.9900 | C14—C15 | 1.458 (2) |
C7—C6 | 1.505 (2) | C15—C16 | 1.400 (3) |
C1—C2 | 1.393 (3) | C15—C20 | 1.396 (3) |
C1—C6 | 1.381 (3) | C16—H16 | 0.9500 |
C2—H2B | 0.9500 | C16—C17 | 1.371 (3) |
C2—C3 | 1.380 (3) | C17—H17 | 0.9500 |
C3—H3 | 0.9500 | C17—C18 | 1.385 (3) |
C3—C4 | 1.373 (3) | C18—H18 | 0.9500 |
C4—H4 | 0.9500 | C18—C19 | 1.375 (3) |
C4—C5 | 1.391 (3) | C19—H19 | 0.9500 |
C5—H5 | 0.9500 | C19—C20 | 1.391 (3) |
C1—O1—H1 | 109.5 | C10—C9—C8 | 116.71 (18) |
C20—O2—H2 | 109.5 | C10—C9—H9 | 121.6 |
C8—N1—C7 | 126.87 (14) | C9—C10—H10 | 118.9 |
C14—N1—C7 | 124.73 (14) | C9—C10—C11 | 122.14 (18) |
C14—N1—C8 | 108.30 (14) | C11—C10—H10 | 118.9 |
C13—N2—H2A | 125.2 | C10—C11—H11 | 119.2 |
C14—N2—H2A | 125.2 | C12—C11—C10 | 121.63 (17) |
C14—N2—C13 | 109.54 (15) | C12—C11—H11 | 119.2 |
N1—C7—H7A | 109.2 | C11—C12—H12 | 121.8 |
N1—C7—H7B | 109.2 | C11—C12—C13 | 116.42 (18) |
N1—C7—C6 | 112.25 (14) | C13—C12—H12 | 121.8 |
H7A—C7—H7B | 107.9 | N2—C13—C8 | 106.63 (15) |
C6—C7—H7A | 109.2 | N2—C13—C12 | 131.29 (17) |
C6—C7—H7B | 109.2 | C12—C13—C8 | 122.08 (17) |
O1—C1—C2 | 122.67 (19) | N1—C14—C15 | 128.09 (16) |
O1—C1—C6 | 116.49 (16) | N2—C14—N1 | 109.17 (15) |
C6—C1—C2 | 120.84 (18) | N2—C14—C15 | 122.61 (15) |
C1—C2—H2B | 120.4 | C16—C15—C14 | 118.21 (16) |
C3—C2—C1 | 119.1 (2) | C20—C15—C14 | 122.35 (17) |
C3—C2—H2B | 120.4 | C20—C15—C16 | 119.39 (17) |
C2—C3—H3 | 119.5 | C15—C16—H16 | 119.5 |
C4—C3—C2 | 121.02 (19) | C17—C16—C15 | 120.94 (18) |
C4—C3—H3 | 119.5 | C17—C16—H16 | 119.5 |
C3—C4—H4 | 120.2 | C16—C17—H17 | 120.5 |
C3—C4—C5 | 119.60 (19) | C16—C17—C18 | 119.01 (19) |
C5—C4—H4 | 120.2 | C18—C17—H17 | 120.5 |
C4—C5—H5 | 119.8 | C17—C18—H18 | 119.4 |
C4—C5—C6 | 120.3 (2) | C19—C18—C17 | 121.23 (18) |
C6—C5—H5 | 119.8 | C19—C18—H18 | 119.4 |
C1—C6—C7 | 119.68 (16) | C18—C19—H19 | 120.0 |
C1—C6—C5 | 119.00 (18) | C18—C19—C20 | 120.08 (17) |
C5—C6—C7 | 121.27 (18) | C20—C19—H19 | 120.0 |
C9—C8—N1 | 132.62 (17) | O2—C20—C15 | 117.13 (16) |
C9—C8—C13 | 121.01 (16) | O2—C20—C19 | 123.57 (16) |
C13—C8—N1 | 106.36 (15) | C19—C20—C15 | 119.29 (17) |
C8—C9—H9 | 121.6 | ||
O1—C1—C2—C3 | 178.87 (18) | C8—C9—C10—C11 | −1.1 (3) |
O1—C1—C6—C7 | 0.3 (2) | C9—C8—C13—N2 | −179.52 (17) |
O1—C1—C6—C5 | −177.18 (16) | C9—C8—C13—C12 | 0.8 (3) |
N1—C7—C6—C1 | 63.1 (2) | C9—C10—C11—C12 | 0.4 (3) |
N1—C7—C6—C5 | −119.49 (18) | C10—C11—C12—C13 | 0.9 (3) |
N1—C8—C9—C10 | −178.6 (2) | C11—C12—C13—N2 | 178.91 (19) |
N1—C8—C13—N2 | −0.2 (2) | C11—C12—C13—C8 | −1.5 (3) |
N1—C8—C13—C12 | −179.86 (17) | C13—N2—C14—N1 | −0.2 (2) |
N1—C14—C15—C16 | 123.4 (2) | C13—N2—C14—C15 | 175.93 (16) |
N1—C14—C15—C20 | −59.2 (3) | C13—C8—C9—C10 | 0.5 (3) |
N2—C14—C15—C16 | −51.9 (3) | C14—N1—C7—C6 | −134.04 (18) |
N2—C14—C15—C20 | 125.5 (2) | C14—N1—C8—C9 | 179.3 (2) |
C7—N1—C8—C9 | 2.7 (3) | C14—N1—C8—C13 | 0.1 (2) |
C7—N1—C8—C13 | −176.58 (17) | C14—N2—C13—C8 | 0.2 (2) |
C7—N1—C14—N2 | 176.79 (16) | C14—N2—C13—C12 | 179.9 (2) |
C7—N1—C14—C15 | 1.0 (3) | C14—C15—C16—C17 | 179.90 (18) |
C1—C2—C3—C4 | −1.4 (3) | C14—C15—C20—O2 | −0.1 (3) |
C2—C1—C6—C7 | −179.56 (16) | C14—C15—C20—C19 | −179.40 (17) |
C2—C1—C6—C5 | 3.0 (3) | C15—C16—C17—C18 | −0.8 (3) |
C2—C3—C4—C5 | 2.4 (3) | C16—C15—C20—O2 | 177.20 (16) |
C3—C4—C5—C6 | −0.6 (3) | C16—C15—C20—C19 | −2.1 (3) |
C4—C5—C6—C7 | −179.43 (17) | C16—C17—C18—C19 | −1.2 (3) |
C4—C5—C6—C1 | −2.0 (3) | C17—C18—C19—C20 | 1.6 (3) |
C6—C1—C2—C3 | −1.3 (3) | C18—C19—C20—O2 | −179.12 (17) |
C8—N1—C7—C6 | 42.1 (2) | C18—C19—C20—C15 | 0.1 (3) |
C8—N1—C14—N2 | 0.1 (2) | C20—C15—C16—C17 | 2.5 (3) |
C8—N1—C14—C15 | −175.76 (18) |
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1···Cl1i | 0.84 | 2.24 | 3.066 (2) | 169 |
O2—H2···Cl1 | 0.84 | 2.23 | 3.071 (1) | 177 |
N2—H2A···Cl1ii | 0.88 | 2.23 | 3.084 (2) | 162 |
C16—H16···O1iii | 0.95 | 2.57 | 3.253 (2) | 129 |
C19—H19···Cl1 | 0.95 | 2.93 | 3.646 (2) | 134 |
C7—H7B···Cg(C1-C6)iv | 0.99 | 2.77 | 3.500 (2) | 131 |
Symmetry codes: (i) x+1, y, z; (ii) −x, −y+1, −z+1; (iii) −x+1, −y+1, −z+1; (iv) −x+1, −y+1, −z+2. |
Crystal | DFT optimized | |
C20—O2 | 1.356 (2) | 1.315 |
C20—C19 | 1.391 (3) | 1.413 |
C14—N2 | 1.337 (2) | 1.356 |
C14—N1 | 1.344 (2) | 1.349 |
∠ C16—C15—C14—N1 | 123.4 (2) | 137.99 |
∠ C20—C15—C14—N2 | 125.5 (2) | 132.45 |
Wavelength | Oscillator strength | Transition |
356 nm | 0.088 | LUMO←HOMO-3 (98%) |
277 nm | 0.2827 | LUMO←HOMO-5 (96%) |
253 nm | 0.0537 | LUMO+2←HOMO-3 (78%) LUMO+3←HOMO-3 (12%) |
Acknowledgements
TK thanks the CSIR and IRCC, IIT Bombay for a research fellowship. Department of Chemistry, IIT Bombay is acknowledged for the high-performance computing facility and single-crystal X-ray facility. The authors thank Archit Sanadhya, Harit Kumar and Pooja S. Varak for their efforts in synthesizing the title compound and also thank Shefali Vaidya for her help in drawing the packing diagram.
Funding information
Funding for this research was provided by: Science and Engineering Research Board (grant to Anindya Datta).
References
Al-Douh, M. H., Osman, H., Hamid, S. A., Kia, R. & Fun, H.-K. (2009a). Acta Cryst. E65, o925–o926. Web of Science CSD CrossRef IUCr Journals Google Scholar
Al-Douh, M. H., Osman, H., Hamid, S. A., Kia, R. & Fun, H.-K. (2009b). Acta Cryst. E65, o913–o914. Web of Science CSD CrossRef IUCr Journals Google Scholar
Benelhadj, K., Massue, J., Retailleau, P., Ulrich, G. & Ziessel, R. (2013). Org. Lett. 15, 2918–2921. Web of Science CSD CrossRef CAS PubMed Google Scholar
Carvalho, L. C. R., Fernandes, E. & Marques, M. M. B. (2011). Chem. Eur. J. 17, 12544–12555. Web of Science CrossRef CAS PubMed Google Scholar
Dolomanov, O. V., Bourhis, L. J., Gildea, R. J., Howard, J. A. K. & Puschmann, H. (2009). J. Appl. Cryst. 42, 339–341. Web of Science CrossRef CAS IUCr Journals Google Scholar
Douhal, A., Amat-Guerri, F., Lillo, M. P. & Acua, A. U. (1994). J. Photochem. Photobiol. Chem. 78, 127–138. CrossRef CAS Web of Science Google Scholar
Fang, X.-N., Liu, L.-M., Huang, G.-S. & Hu, P. (2007). Acta Cryst. E63, o4881. Web of Science CSD CrossRef IUCr Journals Google Scholar
Frisch, M. J., et al. (2009). GAUSSIAN09. Gaussian Inc., Wallingford, CT, USA. Google Scholar
Groom, C. R., Bruno, I. J., Lightfoot, M. P. & Ward, S. C. (2016). Acta Cryst. B72, 171–179. Web of Science CSD CrossRef IUCr Journals Google Scholar
Ha, K. (2012). Acta Cryst. E68, o1398. Web of Science CSD CrossRef IUCr Journals Google Scholar
Hirayama, K. (1967). In Handbook of Ultraviolet and Visible Absorption Spectra of Organic Compounds. New York: Plenum Press Data Division. Google Scholar
Keri, R. S., Hiremathad, A., Budagumpi, S. & Nagaraja, B. M. (2015). Chem. Biol. Drug Des. 86, 19–65. Web of Science CrossRef PubMed Google Scholar
Konoshima, H., Nagao, S., Kiyota, I., Amimoto, K., Yamamoto, N., Sekine, M., Nakata, M., Furukawa, K. & Sekiya, H. (2012). Phys. Chem. Chem. Phys. 14, 16448–16457. Web of Science CSD CrossRef CAS PubMed Google Scholar
Kubelka, P. & Munk, F. (1931). Z. Tech. Phys. 11A, 593–601. Google Scholar
Mosquera, M., Penedo, J. C., Ríos Rodríguez, M. C. & Rodríguez-Prieto, F. (1996). J. Phys. Chem. 100, 5398–5407. CrossRef CAS Web of Science Google Scholar
Rigaku Oxford Diffraction (2015). CrysAlis PRO. Rigaku Oxford Diffraction Ltd, Abingdon, England. Google Scholar
Ríos Vázquez, S., Ríos Rodríguez, M. C., Mosquera, M. & Rodríguez-Prieto, F. (2008). J. Phys. Chem. A, 112, 376–387. Web of Science PubMed Google Scholar
Sheldrick, G. M. (2015a). Acta Cryst. A71, 3–8. Web of Science CrossRef IUCr Journals Google Scholar
Sheldrick, G. M. (2015b). Acta Cryst. C71, 3–8. Web of Science CrossRef IUCr Journals Google Scholar
Shida, T., Mutai, T. & Araki, K. (2013). CrystEngComm, 15, 10179–10182. Web of Science CSD CrossRef CAS Google Scholar
Soman, R., Sujatha, S. & Arunkumar, C. (2014). J. Fluor. Chem. 163, 16–22. Web of Science CSD CrossRef CAS Google Scholar
Spackman, M. A. & Jayatilaka, D. (2009). CrystEngComm, 11, 19–32. Web of Science CrossRef CAS Google Scholar
Sun, P., Jian, F. & Tian, Y. (2011). J. Chem. Crystallogr. 41, 1049–1052. Web of Science CSD CrossRef CAS Google Scholar
Tarte, N. H., Cho, H. Y. & Woo, S. I. (2007). Macromolecules, 40, 8162–8167. Web of Science CSD CrossRef CAS Google Scholar
Wan, J.-P., Gan, S.-F., Wu, J.-M. & Pan, Y. (2009). Green Chem. 11, 1633–1637. Web of Science CrossRef CAS Google Scholar
Wang, Y.-T., Tang, G.-M., He, C., Yan, S.-C., Hao, Q.-C., Chen, L., Long, X.-F., Li, T.-D. & Ng, S. W. (2011). CrystEngComm, 13, 6365–6368. Web of Science CSD CrossRef CAS Google Scholar
Yang, X., Jones, R. A., Lai, R. J., Waheed, A., Oye, M. M. & Holmes, A. L. (2006). Polyhedron, 25, 881–887. Web of Science CSD CrossRef CAS Google Scholar
Zhao, D., Hu, J., Wu, N., Huang, X., Qin, X., Lan, J. & You, J. (2011). Org. Lett. 13, 6516–6519. Web of Science CrossRef CAS PubMed Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.