research communications
S)-5-chloro-N-({2-oxo-3-[4-(3-oxomorpholin-4-yl)phenyl]oxazolidin-5-yl}methyl)thiophene-2-carboxamide
of (aChemistry Department, Zhejiang University, Hangzhou, Zhejiang 310028, People's Republic of China, and bInstitute of Chemical Biology and Pharmaceutical Chemistry, Zhejiang University, Hangzhou, Zhejiang 310028, People's Republic of China
*Correspondence e-mail: huxiurong@zju.edu.cn
The 19H18ClN3O5, contains two rivaroxaban molecules with different conformations; the C—C—N—C torsion angles between the oxazolidine and thiophene rings are −171.1 (7) and −106.8 (9)° in the two independent molecules. In the crystal, classical N—H⋯O hydrogen bonds and weak C—H⋯O hydrogen bonds link the molecules into a three-dimensional supramolecular architecture.
of the crystal of the title compound (common name rivaroxaban), CKeywords: crystal structure; rivaroxaban; Hirshfeld surface; hydrogen bonds.
CCDC reference: 1810879
1. Chemical context
At present, the incidence of thromboic disease is extremely high; this is mainly caused by vascular endothelial injury, increased blood ). In anticoagulants, warfarin and heparin have dominated the market, but they have some defects such as making making patients bleed easily and be prone to thrombocytopenia and osteoporosis (Mega & Carreras, 2012). In recent years, factor Xa inhibitors, the new type of anticoagulant drugs, have received more and more attention, and rivaroxaban is a representative drug of factor Xa inhibitors (Goel & Srivathsan, 2012).
increased platelet number and decreased anticoagulant activity (Lassila, 2012Rivaroxaban is a novel oral direct factor Xa inhibitor that inhibits factor Xa selectively, thereby prolongs prothrombin time and reduces thrombin generation (Ansell, 2007). It does not have a direct effect on thrombin but it inhibits the formation of thrombin by inhibiting factor Xa activity, which impedes the formation of fibrin in turn and ultimately inhibits thrombus formation and enlargement (Perzborn et al., 2005). In 2011, rivaroxaban was approved by the US Food and Drug Administration (FDA) for the prevention of stroke or systemic embolism in patients with non-valvular atrial fibrillation. The patent WO2007039132 (Ludescher et al., 2012) concerned crystalline form I, form II, form III, the amorphous form, the hydrate, the NMP solvate and the THF clathrate of rivaroxaban. However, there are few reports on the single-crystal structure of rivaroxaban. As part of our ongoing structural studies of pharmaceutical compounds, the of rivaroxaban is presented here.
2. Structural commentary
The molecular structure of the title compound is shown in Fig. 1. The contains two molecules with different conformations. In the N-methylformamide moieties of molecules A and B, the C7—C6—N1—C5 torsion angles are −171.1 (7) and −106.8 (9)°, respectively (Table 1). The oxazolidine ring of molecule A is almost planar [the maximum deviation is 0.048 (6) Å for the O2A atom], whereas the oxazolidine ring of molecule B displays an with atom C8B as the flap. The morpholine rings of the two molecules display similar twisted boat conformations. Atoms O4 and C17 deviate from the C16/N3/C19/C18 mean plane by 0.230 (2) and 0.517 (2) Å, respectively, in molecule A and by 0.290 (2) and 0.489 (2) Å in molecule B.
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3. Supramolecular features
In the crystal, N—H⋯O hydrogen bonds (Table 2, Fig. 2) link the independent molecules A and B into dimers, and weak C—H⋯O hydrogen bonds link the dimers to form a three-dimensional supramolecular architecture (Table 2).
4. Hirshfeld surface analysis
The Hirshfeld surface of a molecule in a crystal is constructed by calculating the spherical atom electron densities. On the dnorm surface, when intermolecular contacts are shorter than the sum of van der Waals radii, they are highlighted in red, longer contacts in blue and contacts around the sum of van der Waals radii in white. The Hirshfeld surface analyses and two-dimensional fingerprint plots for the title compound were generated by CrystalExplorer (Wolff et al., 2013), and are illustrated in Figs. 3 and 4, respectively.
The light-red spots on the Hirshfeld surface are the results of N—H⋯O, C—H⋯O and C—Cl⋯O interactions (Fig. 3). The H⋯H contacts, which comprise 27% of the total Hirshfeld surface area, appear in the central region of the fingerprint plot (Fig. 3b). The O⋯H/H⋯O interactions (22.4%), which are the most significant intermolecular interactions and link the molecular dimers into infinite chains along the b axis, appear as two obvious spikes (Fig. 3c). At the top left (di < de) and bottom right (di > de) of the fingerprint plot, there are characteristic `wings' that are identified resulting from the C⋯H/H⋯C interactions (18.7%) shown in Fig. 3d.
5. Synthesis and crystallization
The crude product was supplied by the Zhejiang Huadong Pharmaceutical Co., Ltd. It was recrystallized from methanol solution, giving colourless crystals suitable for X-ray diffraction.
6. Refinement
Crystal data, data collection and structure . N-bound atoms H1A and H1B were found in difference-Fourier maps, but placed in calculated positions with N—H = 0.86 Å and refined as riding with Uiso(H) = 1.2Ueq(N). All other H atoms were placed in calculated positions with C—H = 0.93–0.98 Å and included in the in a riding model, with Uiso(H) = 1.2 or 1.5Ueq(carrier atom).
details are summarized in Table 3
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Supporting information
CCDC reference: 1810879
https://doi.org/10.1107/S2056989017017819/xu5913sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S2056989017017819/xu5913Isup2.hkl
Supporting information file. DOI: https://doi.org/10.1107/S2056989017017819/xu5913Isup3.cml
Data collection: PROCESS-AUTO (Rigaku, 2006); cell
PROCESS-AUTO (Rigaku, 2006); data reduction: CrystalStructure (Rigaku, 2007); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012) and DIAMOND (Brandenburg & Putz, 2006); software used to prepare material for publication: WinGX (Farrugia, 2012).C19H18ClN3O5S | Z = 2 |
Mr = 435.87 | F(000) = 452 |
Triclinic, P1 | Dx = 1.515 Mg m−3 |
Hall symbol: P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 9.0184 (6) Å | Cell parameters from 6182 reflections |
b = 10.9980 (8) Å | θ = 3.3–27.5° |
c = 11.2386 (8) Å | µ = 0.35 mm−1 |
α = 63.426 (2)° | T = 296 K |
β = 74.414 (3)° | Platelet, colorless |
γ = 78.144 (2)° | 0.39 × 0.27 × 0.06 mm |
V = 955.56 (12) Å3 |
Rigaku R-AXIS RAPID diffractometer | 6267 independent reflections |
Radiation source: rotating anode | 3981 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.043 |
Detector resolution: 10.00 pixels mm-1 | θmax = 26.0°, θmin = 3.3° |
ω scans | h = −11→10 |
Absorption correction: multi-scan (ABSCOR; Higashi, 1995) | k = −13→13 |
Tmin = 0.868, Tmax = 0.979 | l = −13→12 |
8375 measured reflections |
Refinement on F2 | Hydrogen site location: inferred from neighbouring sites |
Least-squares matrix: full | H-atom parameters constrained |
R[F2 > 2σ(F2)] = 0.045 | w = 1/[σ2(Fo2) + (0.0576P)2 + 0.9688P] where P = (Fo2 + 2Fc2)/3 |
wR(F2) = 0.149 | (Δ/σ)max < 0.001 |
S = 1.00 | Δρmax = 0.33 e Å−3 |
6267 reflections | Δρmin = −0.47 e Å−3 |
524 parameters | Extinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
3 restraints | Extinction coefficient: 0.0153 (18) |
Primary atom site location: structure-invariant direct methods | Absolute structure: Flack (1983), 2519 Friedel pairs |
Secondary atom site location: difference Fourier map | Absolute structure parameter: −0.07 (13) |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
C1A | −0.1583 (9) | 1.0666 (8) | 0.2283 (8) | 0.0439 (19) | |
C2A | −0.0913 (9) | 0.9526 (9) | 0.2067 (9) | 0.055 (2) | |
H2A | −0.1318 | 0.9137 | 0.1654 | 0.066* | |
C3A | 0.0484 (9) | 0.9019 (8) | 0.2560 (8) | 0.049 (2) | |
H3A | 0.1097 | 0.8251 | 0.2496 | 0.059* | |
C4A | 0.0845 (9) | 0.9721 (8) | 0.3113 (8) | 0.044 (2) | |
C5A | 0.2153 (9) | 0.9561 (8) | 0.3737 (8) | 0.046 (2) | |
C6A | 0.4500 (8) | 0.8320 (8) | 0.4481 (8) | 0.0536 (19) | |
H6A1 | 0.4173 | 0.8227 | 0.5410 | 0.064* | |
H6A2 | 0.5024 | 0.9143 | 0.3946 | 0.064* | |
C7A | 0.5590 (6) | 0.7108 (6) | 0.4437 (6) | 0.0432 (14) | |
H7A | 0.5844 | 0.7152 | 0.3515 | 0.052* | |
C8A | 0.7087 (8) | 0.6965 (8) | 0.4921 (7) | 0.0468 (18) | |
H8A1 | 0.7986 | 0.7055 | 0.4193 | 0.056* | |
H8A2 | 0.7049 | 0.7645 | 0.5259 | 0.056* | |
C9A | 0.5857 (9) | 0.4996 (8) | 0.6187 (8) | 0.0426 (18) | |
C10A | 0.8327 (8) | 0.5027 (8) | 0.6745 (7) | 0.0371 (17) | |
C11A | 0.9704 (8) | 0.5597 (9) | 0.6184 (8) | 0.051 (2) | |
H11A | 0.9842 | 0.6319 | 0.5327 | 0.061* | |
C12A | 1.0901 (9) | 0.5086 (9) | 0.6909 (8) | 0.052 (2) | |
H12A | 1.1832 | 0.5479 | 0.6538 | 0.063* | |
C13A | 1.0706 (9) | 0.4001 (8) | 0.8169 (7) | 0.0405 (19) | |
C14A | 0.9315 (9) | 0.3423 (9) | 0.8685 (8) | 0.048 (2) | |
H14A | 0.9183 | 0.2673 | 0.9521 | 0.058* | |
C15A | 0.8124 (9) | 0.3937 (8) | 0.7984 (7) | 0.0425 (18) | |
H15A | 0.7192 | 0.3546 | 0.8350 | 0.051* | |
C16A | 1.2171 (11) | 0.4524 (11) | 0.9410 (11) | 0.067 (3) | |
H16A | 1.1206 | 0.5014 | 0.9664 | 0.080* | |
H16B | 1.2822 | 0.5185 | 0.8665 | 0.080* | |
C17A | 1.2969 (10) | 0.3788 (11) | 1.0610 (9) | 0.065 (3) | |
H17A | 1.3259 | 0.4449 | 1.0837 | 0.078* | |
H17B | 1.2270 | 0.3213 | 1.1393 | 0.078* | |
C18A | 1.3869 (11) | 0.1916 (9) | 1.0115 (10) | 0.059 (2) | |
H18A | 1.3534 | 0.1208 | 1.1008 | 0.071* | |
H18B | 1.4791 | 0.1531 | 0.9671 | 0.071* | |
C19A | 1.2629 (9) | 0.2279 (9) | 0.9317 (8) | 0.048 (2) | |
C1B | 1.0264 (9) | −0.0628 (8) | 0.7509 (8) | 0.0427 (19) | |
C2B | 0.9694 (9) | 0.0466 (9) | 0.7726 (9) | 0.052 (2) | |
H2B | 1.0163 | 0.0829 | 0.8121 | 0.062* | |
C3B | 0.8282 (10) | 0.1024 (10) | 0.7290 (9) | 0.054 (2) | |
H3B | 0.7724 | 0.1812 | 0.7352 | 0.065* | |
C4B | 0.7817 (9) | 0.0297 (8) | 0.6767 (8) | 0.0427 (19) | |
C5B | 0.6395 (9) | 0.0457 (9) | 0.6254 (8) | 0.047 (2) | |
C6B | 0.3859 (8) | 0.1766 (7) | 0.5957 (8) | 0.056 (2) | |
H6B1 | 0.3174 | 0.2091 | 0.6606 | 0.068* | |
H6B2 | 0.3573 | 0.0878 | 0.6168 | 0.068* | |
C7B | 0.3595 (7) | 0.2715 (6) | 0.4581 (6) | 0.0417 (13) | |
H7B | 0.4197 | 0.2367 | 0.3911 | 0.050* | |
C8B | 0.1891 (8) | 0.2963 (7) | 0.4524 (9) | 0.052 (2) | |
H8B1 | 0.1633 | 0.2406 | 0.4154 | 0.062* | |
H8B2 | 0.1238 | 0.2786 | 0.5414 | 0.062* | |
C9B | 0.2926 (8) | 0.5022 (9) | 0.3553 (7) | 0.0397 (18) | |
C10B | 0.0478 (8) | 0.5025 (8) | 0.2993 (7) | 0.0347 (16) | |
C11B | −0.0894 (9) | 0.4413 (8) | 0.3481 (8) | 0.0444 (19) | |
H11B | −0.1005 | 0.3637 | 0.4297 | 0.053* | |
C12B | −0.2088 (9) | 0.4918 (9) | 0.2796 (8) | 0.049 (2) | |
H12B | −0.2986 | 0.4478 | 0.3144 | 0.059* | |
C13B | −0.1964 (9) | 0.6065 (8) | 0.1604 (8) | 0.0391 (18) | |
C14B | −0.0649 (8) | 0.6727 (8) | 0.1093 (7) | 0.0392 (17) | |
H14B | −0.0578 | 0.7520 | 0.0292 | 0.047* | |
C15B | 0.0591 (8) | 0.6212 (8) | 0.1778 (7) | 0.0367 (17) | |
H15B | 0.1485 | 0.6658 | 0.1425 | 0.044* | |
C16B | −0.3420 (11) | 0.5655 (11) | 0.0280 (11) | 0.069 (3) | |
H16C | −0.3988 | 0.4912 | 0.0998 | 0.083* | |
H16D | −0.2424 | 0.5266 | −0.0061 | 0.083* | |
C17B | −0.4295 (10) | 0.6406 (12) | −0.0841 (10) | 0.065 (3) | |
H17C | −0.3674 | 0.7069 | −0.1616 | 0.078* | |
H17D | −0.4543 | 0.5772 | −0.1126 | 0.078* | |
C18B | −0.5312 (10) | 0.8161 (9) | −0.0125 (9) | 0.056 (2) | |
H18C | −0.6237 | 0.8480 | 0.0378 | 0.067* | |
H18D | −0.5027 | 0.8917 | −0.0996 | 0.067* | |
C19B | −0.4012 (9) | 0.7757 (9) | 0.0650 (8) | 0.0437 (19) | |
N1A | 0.3152 (7) | 0.8431 (7) | 0.3946 (7) | 0.0498 (17) | |
H1A | 0.2999 | 0.7788 | 0.3769 | 0.060* | |
N2A | 0.7116 (7) | 0.5601 (7) | 0.5999 (6) | 0.0372 (14) | |
N3A | 1.1862 (8) | 0.3562 (7) | 0.8972 (7) | 0.0432 (15) | |
N1B | 0.5436 (7) | 0.1595 (7) | 0.6146 (7) | 0.0532 (17) | |
H1B | 0.5767 | 0.2250 | 0.6192 | 0.064* | |
N2B | 0.1756 (6) | 0.4401 (6) | 0.3618 (6) | 0.0368 (14) | |
N3B | −0.3186 (7) | 0.6567 (7) | 0.0831 (6) | 0.0409 (15) | |
O1A | 0.2326 (8) | 1.0454 (7) | 0.4062 (8) | 0.084 (2) | |
O2A | 0.4876 (6) | 0.5867 (5) | 0.5382 (6) | 0.0555 (15) | |
O3A | 0.5553 (7) | 0.3836 (6) | 0.6960 (6) | 0.0604 (16) | |
O4A | 1.4274 (7) | 0.2998 (7) | 1.0281 (7) | 0.0691 (19) | |
O5A | 1.2297 (8) | 0.1426 (7) | 0.9017 (6) | 0.0673 (17) | |
O1B | 0.6129 (7) | −0.0440 (6) | 0.6016 (7) | 0.0673 (17) | |
O2B | 0.3984 (6) | 0.4081 (6) | 0.4212 (6) | 0.0482 (13) | |
O3B | 0.3058 (7) | 0.6245 (6) | 0.3060 (6) | 0.0541 (14) | |
O4B | −0.5669 (7) | 0.7076 (7) | −0.0354 (6) | 0.0594 (16) | |
O5B | −0.3806 (7) | 0.8525 (6) | 0.1100 (6) | 0.0622 (16) | |
S1A | −0.0530 (2) | 1.1087 (2) | 0.3076 (2) | 0.0611 (6) | |
S1B | 0.9128 (2) | −0.1087 (2) | 0.6818 (2) | 0.0563 (6) | |
Cl1A | −0.3274 (2) | 1.1591 (2) | 0.1863 (2) | 0.0640 (6) | |
Cl1B | 1.1962 (2) | −0.1602 (2) | 0.7917 (2) | 0.0675 (7) |
U11 | U22 | U33 | U12 | U13 | U23 | |
C1A | 0.037 (4) | 0.045 (5) | 0.042 (4) | −0.002 (4) | −0.016 (3) | −0.008 (4) |
C2A | 0.054 (5) | 0.043 (5) | 0.064 (5) | 0.001 (4) | −0.017 (4) | −0.019 (4) |
C3A | 0.040 (4) | 0.034 (4) | 0.072 (5) | 0.015 (3) | −0.030 (4) | −0.018 (4) |
C4A | 0.041 (5) | 0.038 (5) | 0.054 (4) | 0.005 (4) | −0.019 (4) | −0.016 (4) |
C5A | 0.040 (4) | 0.036 (4) | 0.067 (5) | 0.000 (3) | −0.023 (4) | −0.021 (4) |
C6A | 0.044 (4) | 0.049 (4) | 0.081 (5) | 0.002 (3) | −0.028 (4) | −0.031 (4) |
C7A | 0.041 (3) | 0.043 (3) | 0.043 (3) | −0.002 (2) | −0.015 (3) | −0.013 (3) |
C8A | 0.039 (4) | 0.044 (4) | 0.050 (4) | 0.001 (3) | −0.021 (3) | −0.008 (3) |
C9A | 0.056 (5) | 0.025 (4) | 0.048 (4) | 0.014 (3) | −0.030 (4) | −0.013 (3) |
C10A | 0.034 (4) | 0.041 (4) | 0.042 (4) | 0.006 (3) | −0.014 (3) | −0.023 (4) |
C11A | 0.032 (4) | 0.064 (6) | 0.047 (4) | −0.013 (4) | −0.011 (3) | −0.009 (4) |
C12A | 0.033 (4) | 0.050 (5) | 0.058 (5) | −0.004 (3) | −0.008 (4) | −0.010 (4) |
C13A | 0.033 (4) | 0.049 (5) | 0.042 (4) | 0.006 (3) | −0.017 (3) | −0.020 (4) |
C14A | 0.052 (5) | 0.042 (4) | 0.047 (4) | 0.001 (4) | −0.015 (4) | −0.016 (4) |
C15A | 0.038 (4) | 0.048 (5) | 0.044 (4) | −0.009 (3) | −0.017 (3) | −0.015 (4) |
C16A | 0.067 (6) | 0.073 (6) | 0.092 (7) | 0.013 (5) | −0.050 (5) | −0.051 (6) |
C17A | 0.057 (5) | 0.091 (7) | 0.066 (6) | 0.004 (5) | −0.027 (5) | −0.046 (5) |
C18A | 0.061 (5) | 0.053 (6) | 0.071 (5) | 0.014 (4) | −0.032 (4) | −0.031 (5) |
C19A | 0.045 (4) | 0.046 (5) | 0.052 (4) | 0.008 (4) | −0.021 (4) | −0.019 (4) |
C1B | 0.032 (4) | 0.046 (5) | 0.041 (4) | 0.001 (3) | −0.016 (3) | −0.008 (4) |
C2B | 0.039 (4) | 0.062 (6) | 0.067 (5) | −0.003 (4) | −0.028 (4) | −0.029 (5) |
C3B | 0.052 (5) | 0.060 (6) | 0.065 (5) | 0.000 (4) | −0.027 (4) | −0.033 (5) |
C4B | 0.034 (4) | 0.037 (5) | 0.057 (5) | −0.001 (3) | −0.021 (4) | −0.015 (4) |
C5B | 0.038 (4) | 0.045 (5) | 0.053 (5) | 0.006 (4) | −0.019 (3) | −0.014 (4) |
C6B | 0.035 (4) | 0.042 (4) | 0.080 (5) | 0.004 (3) | −0.025 (4) | −0.011 (4) |
C7B | 0.041 (3) | 0.036 (3) | 0.055 (4) | 0.001 (2) | −0.024 (3) | −0.020 (3) |
C8B | 0.047 (4) | 0.031 (4) | 0.080 (5) | 0.002 (3) | −0.033 (4) | −0.017 (4) |
C9B | 0.024 (3) | 0.055 (5) | 0.048 (4) | −0.011 (3) | −0.010 (3) | −0.024 (4) |
C10B | 0.027 (3) | 0.035 (4) | 0.050 (4) | −0.001 (3) | −0.016 (3) | −0.021 (4) |
C11B | 0.046 (4) | 0.035 (4) | 0.046 (4) | 0.000 (3) | −0.021 (3) | −0.006 (3) |
C12B | 0.034 (4) | 0.054 (5) | 0.065 (5) | −0.009 (3) | −0.023 (4) | −0.021 (4) |
C13B | 0.036 (4) | 0.037 (4) | 0.053 (4) | 0.006 (3) | −0.022 (3) | −0.023 (4) |
C14B | 0.036 (4) | 0.038 (4) | 0.043 (4) | 0.000 (3) | −0.018 (3) | −0.011 (3) |
C15B | 0.032 (4) | 0.035 (4) | 0.038 (4) | −0.004 (3) | −0.010 (3) | −0.009 (3) |
C16B | 0.064 (5) | 0.066 (6) | 0.111 (8) | 0.023 (5) | −0.054 (6) | −0.058 (6) |
C17B | 0.051 (5) | 0.095 (7) | 0.076 (6) | 0.000 (5) | −0.031 (5) | −0.053 (6) |
C18B | 0.047 (5) | 0.053 (5) | 0.056 (5) | 0.002 (4) | −0.020 (4) | −0.011 (4) |
C19B | 0.034 (4) | 0.049 (5) | 0.047 (4) | 0.005 (3) | −0.013 (3) | −0.019 (4) |
N1A | 0.044 (4) | 0.037 (4) | 0.076 (4) | 0.008 (3) | −0.027 (3) | −0.027 (3) |
N2A | 0.028 (3) | 0.037 (3) | 0.041 (3) | 0.000 (2) | −0.014 (2) | −0.010 (3) |
N3A | 0.041 (3) | 0.045 (4) | 0.053 (4) | 0.010 (3) | −0.026 (3) | −0.025 (3) |
N1B | 0.039 (4) | 0.042 (4) | 0.071 (4) | −0.001 (3) | −0.032 (3) | −0.008 (3) |
N2B | 0.034 (3) | 0.035 (3) | 0.049 (3) | −0.002 (2) | −0.024 (3) | −0.016 (3) |
N3B | 0.040 (3) | 0.046 (4) | 0.050 (4) | 0.003 (3) | −0.028 (3) | −0.024 (3) |
O1A | 0.074 (4) | 0.074 (5) | 0.153 (6) | 0.024 (3) | −0.068 (4) | −0.076 (5) |
O2A | 0.053 (3) | 0.031 (3) | 0.079 (4) | −0.002 (2) | −0.045 (3) | −0.003 (3) |
O3A | 0.060 (3) | 0.041 (4) | 0.082 (4) | −0.011 (3) | −0.039 (3) | −0.011 (3) |
O4A | 0.049 (4) | 0.084 (5) | 0.081 (4) | 0.005 (3) | −0.030 (3) | −0.035 (4) |
O5A | 0.070 (4) | 0.055 (4) | 0.088 (4) | 0.006 (3) | −0.036 (3) | −0.034 (3) |
O1B | 0.069 (4) | 0.054 (4) | 0.107 (5) | 0.006 (3) | −0.047 (3) | −0.046 (4) |
O2B | 0.041 (3) | 0.045 (3) | 0.066 (3) | −0.004 (2) | −0.027 (2) | −0.020 (3) |
O3B | 0.057 (3) | 0.037 (3) | 0.071 (3) | −0.004 (2) | −0.035 (3) | −0.013 (3) |
O4B | 0.046 (3) | 0.066 (4) | 0.073 (4) | 0.004 (3) | −0.034 (3) | −0.027 (3) |
O5B | 0.068 (4) | 0.051 (4) | 0.078 (4) | 0.014 (3) | −0.037 (3) | −0.032 (3) |
S1A | 0.0506 (12) | 0.0551 (14) | 0.0912 (17) | 0.0171 (10) | −0.0335 (12) | −0.0409 (14) |
S1B | 0.0468 (12) | 0.0469 (13) | 0.0783 (15) | 0.0098 (9) | −0.0291 (10) | −0.0255 (12) |
Cl1A | 0.0391 (11) | 0.0656 (16) | 0.0746 (14) | 0.0071 (10) | −0.0234 (11) | −0.0167 (12) |
Cl1B | 0.0391 (11) | 0.0587 (15) | 0.0823 (15) | 0.0071 (10) | −0.0275 (11) | −0.0062 (12) |
C1A—C2A | 1.371 (11) | C1B—S1B | 1.703 (9) |
C1A—Cl1A | 1.704 (8) | C1B—Cl1B | 1.722 (8) |
C1A—S1A | 1.707 (9) | C2B—C3B | 1.408 (12) |
C2A—C3A | 1.420 (12) | C2B—H2B | 0.9300 |
C2A—H2A | 0.9300 | C3B—C4B | 1.361 (12) |
C3A—C4A | 1.315 (12) | C3B—H3B | 0.9300 |
C3A—H3A | 0.9300 | C4B—C5B | 1.491 (12) |
C4A—C5A | 1.471 (12) | C4B—S1B | 1.714 (8) |
C4A—S1A | 1.733 (8) | C5B—O1B | 1.213 (10) |
C5A—O1A | 1.239 (10) | C5B—N1B | 1.344 (10) |
C5A—N1A | 1.344 (10) | C6B—N1B | 1.456 (10) |
C6A—N1A | 1.456 (10) | C6B—C7B | 1.480 (9) |
C6A—C7A | 1.496 (8) | C6B—H6B1 | 0.9700 |
C6A—H6A1 | 0.9700 | C6B—H6B2 | 0.9700 |
C6A—H6A2 | 0.9700 | C7B—O2B | 1.460 (8) |
C7A—O2A | 1.451 (7) | C7B—C8B | 1.518 (9) |
C7A—C8A | 1.540 (9) | C7B—H7B | 0.9800 |
C7A—H7A | 0.9800 | C8B—N2B | 1.449 (9) |
C8A—N2A | 1.447 (9) | C8B—H8B1 | 0.9700 |
C8A—H8A1 | 0.9700 | C8B—H8B2 | 0.9700 |
C8A—H8A2 | 0.9700 | C9B—O3B | 1.222 (9) |
C9A—O3A | 1.217 (9) | C9B—N2B | 1.340 (9) |
C9A—O2A | 1.351 (9) | C9B—O2B | 1.348 (9) |
C9A—N2A | 1.353 (10) | C10B—C11B | 1.390 (11) |
C10A—C15A | 1.367 (10) | C10B—C15B | 1.402 (10) |
C10A—C11A | 1.370 (11) | C10B—N2B | 1.404 (10) |
C10A—N2A | 1.425 (10) | C11B—C12B | 1.370 (11) |
C11A—C12A | 1.399 (12) | C11B—H11B | 0.9300 |
C11A—H11A | 0.9300 | C12B—C13B | 1.365 (11) |
C12A—C13A | 1.379 (11) | C12B—H12B | 0.9300 |
C12A—H12A | 0.9300 | C13B—C14B | 1.371 (11) |
C13A—C14A | 1.386 (11) | C13B—N3B | 1.453 (10) |
C13A—N3A | 1.429 (11) | C14B—C15B | 1.405 (10) |
C14A—C15A | 1.379 (11) | C14B—H14B | 0.9300 |
C14A—H14A | 0.9300 | C15B—H15B | 0.9300 |
C15A—H15A | 0.9300 | C16B—N3B | 1.465 (11) |
C16A—N3A | 1.448 (11) | C16B—C17B | 1.492 (13) |
C16A—C17A | 1.516 (12) | C16B—H16C | 0.9700 |
C16A—H16A | 0.9700 | C16B—H16D | 0.9700 |
C16A—H16B | 0.9700 | C17B—O4B | 1.413 (10) |
C17A—O4A | 1.382 (10) | C17B—H17C | 0.9700 |
C17A—H17A | 0.9700 | C17B—H17D | 0.9700 |
C17A—H17B | 0.9700 | C18B—O4B | 1.439 (11) |
C18A—O4A | 1.413 (11) | C18B—C19B | 1.523 (12) |
C18A—C19A | 1.500 (12) | C18B—H18C | 0.9700 |
C18A—H18A | 0.9700 | C18B—H18D | 0.9700 |
C18A—H18B | 0.9700 | C19B—O5B | 1.225 (10) |
C19A—O5A | 1.240 (11) | C19B—N3B | 1.323 (9) |
C19A—N3A | 1.369 (10) | N1A—H1A | 0.8600 |
C1B—C2B | 1.309 (11) | N1B—H1B | 0.8600 |
C2A—C1A—Cl1A | 126.4 (7) | O1B—C5B—N1B | 123.9 (9) |
C2A—C1A—S1A | 112.0 (6) | O1B—C5B—C4B | 119.9 (8) |
Cl1A—C1A—S1A | 121.6 (5) | N1B—C5B—C4B | 116.1 (8) |
C1A—C2A—C3A | 110.7 (8) | N1B—C6B—C7B | 115.4 (6) |
C1A—C2A—H2A | 124.6 | N1B—C6B—H6B1 | 108.4 |
C3A—C2A—H2A | 124.6 | C7B—C6B—H6B1 | 108.4 |
C4A—C3A—C2A | 114.8 (8) | N1B—C6B—H6B2 | 108.4 |
C4A—C3A—H3A | 122.6 | C7B—C6B—H6B2 | 108.4 |
C2A—C3A—H3A | 122.6 | H6B1—C6B—H6B2 | 107.5 |
C3A—C4A—C5A | 132.7 (7) | O2B—C7B—C6B | 111.0 (6) |
C3A—C4A—S1A | 111.3 (7) | O2B—C7B—C8B | 102.7 (5) |
C5A—C4A—S1A | 116.0 (6) | C6B—C7B—C8B | 111.7 (6) |
O1A—C5A—N1A | 120.8 (8) | O2B—C7B—H7B | 110.4 |
O1A—C5A—C4A | 120.5 (8) | C6B—C7B—H7B | 110.4 |
N1A—C5A—C4A | 118.7 (7) | C8B—C7B—H7B | 110.4 |
N1A—C6A—C7A | 110.4 (6) | N2B—C8B—C7B | 101.2 (5) |
N1A—C6A—H6A1 | 109.6 | N2B—C8B—H8B1 | 111.5 |
C7A—C6A—H6A1 | 109.6 | C7B—C8B—H8B1 | 111.5 |
N1A—C6A—H6A2 | 109.6 | N2B—C8B—H8B2 | 111.5 |
C7A—C6A—H6A2 | 109.6 | C7B—C8B—H8B2 | 111.5 |
H6A1—C6A—H6A2 | 108.1 | H8B1—C8B—H8B2 | 109.3 |
O2A—C7A—C6A | 109.4 (5) | O3B—C9B—N2B | 128.6 (8) |
O2A—C7A—C8A | 104.3 (5) | O3B—C9B—O2B | 121.8 (7) |
C6A—C7A—C8A | 113.4 (6) | N2B—C9B—O2B | 109.6 (7) |
O2A—C7A—H7A | 109.9 | C11B—C10B—C15B | 117.5 (7) |
C6A—C7A—H7A | 109.9 | C11B—C10B—N2B | 121.1 (7) |
C8A—C7A—H7A | 109.9 | C15B—C10B—N2B | 121.1 (7) |
N2A—C8A—C7A | 103.1 (6) | C12B—C11B—C10B | 122.0 (7) |
N2A—C8A—H8A1 | 111.1 | C12B—C11B—H11B | 119.0 |
C7A—C8A—H8A1 | 111.1 | C10B—C11B—H11B | 119.0 |
N2A—C8A—H8A2 | 111.1 | C11B—C12B—C13B | 120.2 (7) |
C7A—C8A—H8A2 | 111.1 | C11B—C12B—H12B | 119.9 |
H8A1—C8A—H8A2 | 109.1 | C13B—C12B—H12B | 119.9 |
O3A—C9A—O2A | 120.6 (8) | C12B—C13B—C14B | 120.2 (7) |
O3A—C9A—N2A | 128.2 (8) | C12B—C13B—N3B | 120.7 (7) |
O2A—C9A—N2A | 111.1 (7) | C14B—C13B—N3B | 119.1 (7) |
C15A—C10A—C11A | 120.9 (8) | C13B—C14B—C15B | 120.2 (7) |
C15A—C10A—N2A | 121.0 (7) | C13B—C14B—H14B | 119.9 |
C11A—C10A—N2A | 118.1 (7) | C15B—C14B—H14B | 119.9 |
C10A—C11A—C12A | 119.6 (8) | C10B—C15B—C14B | 119.9 (7) |
C10A—C11A—H11A | 120.2 | C10B—C15B—H15B | 120.0 |
C12A—C11A—H11A | 120.2 | C14B—C15B—H15B | 120.0 |
C13A—C12A—C11A | 120.2 (8) | N3B—C16B—C17B | 111.0 (8) |
C13A—C12A—H12A | 119.9 | N3B—C16B—H16C | 109.4 |
C11A—C12A—H12A | 119.9 | C17B—C16B—H16C | 109.4 |
C12A—C13A—C14A | 118.6 (8) | N3B—C16B—H16D | 109.4 |
C12A—C13A—N3A | 120.5 (8) | C17B—C16B—H16D | 109.4 |
C14A—C13A—N3A | 120.8 (7) | H16C—C16B—H16D | 108.0 |
C15A—C14A—C13A | 121.4 (8) | O4B—C17B—C16B | 108.2 (7) |
C15A—C14A—H14A | 119.3 | O4B—C17B—H17C | 110.1 |
C13A—C14A—H14A | 119.3 | C16B—C17B—H17C | 110.1 |
C10A—C15A—C14A | 119.3 (8) | O4B—C17B—H17D | 110.1 |
C10A—C15A—H15A | 120.3 | C16B—C17B—H17D | 110.1 |
C14A—C15A—H15A | 120.3 | H17C—C17B—H17D | 108.4 |
N3A—C16A—C17A | 110.6 (8) | O4B—C18B—C19B | 114.2 (7) |
N3A—C16A—H16A | 109.5 | O4B—C18B—H18C | 108.7 |
C17A—C16A—H16A | 109.5 | C19B—C18B—H18C | 108.7 |
N3A—C16A—H16B | 109.5 | O4B—C18B—H18D | 108.7 |
C17A—C16A—H16B | 109.5 | C19B—C18B—H18D | 108.7 |
H16A—C16A—H16B | 108.1 | H18C—C18B—H18D | 107.6 |
O4A—C17A—C16A | 109.3 (7) | O5B—C19B—N3B | 123.4 (8) |
O4A—C17A—H17A | 109.8 | O5B—C19B—C18B | 118.8 (8) |
C16A—C17A—H17A | 109.8 | N3B—C19B—C18B | 117.7 (8) |
O4A—C17A—H17B | 109.8 | C5A—N1A—C6A | 118.4 (7) |
C16A—C17A—H17B | 109.8 | C5A—N1A—H1A | 120.8 |
H17A—C17A—H17B | 108.3 | C6A—N1A—H1A | 120.8 |
O4A—C18A—C19A | 116.1 (8) | C9A—N2A—C10A | 126.5 (7) |
O4A—C18A—H18A | 108.3 | C9A—N2A—C8A | 111.0 (6) |
C19A—C18A—H18A | 108.3 | C10A—N2A—C8A | 122.5 (6) |
O4A—C18A—H18B | 108.3 | C19A—N3A—C13A | 120.9 (8) |
C19A—C18A—H18B | 108.3 | C19A—N3A—C16A | 121.8 (7) |
H18A—C18A—H18B | 107.4 | C13A—N3A—C16A | 117.3 (7) |
O5A—C19A—N3A | 121.9 (8) | C5B—N1B—C6B | 122.7 (8) |
O5A—C19A—C18A | 120.5 (8) | C5B—N1B—H1B | 118.7 |
N3A—C19A—C18A | 117.6 (8) | C6B—N1B—H1B | 118.7 |
C2B—C1B—S1B | 113.9 (6) | C9B—N2B—C10B | 126.6 (7) |
C2B—C1B—Cl1B | 125.4 (7) | C9B—N2B—C8B | 111.3 (6) |
S1B—C1B—Cl1B | 120.6 (5) | C10B—N2B—C8B | 121.9 (6) |
C1B—C2B—C3B | 111.7 (8) | C19B—N3B—C13B | 121.8 (7) |
C1B—C2B—H2B | 124.1 | C19B—N3B—C16B | 123.4 (7) |
C3B—C2B—H2B | 124.1 | C13B—N3B—C16B | 114.7 (7) |
C4B—C3B—C2B | 113.3 (8) | C9A—O2A—C7A | 109.8 (6) |
C4B—C3B—H3B | 123.3 | C17A—O4A—C18A | 110.9 (8) |
C2B—C3B—H3B | 123.3 | C9B—O2B—C7B | 109.4 (5) |
C3B—C4B—C5B | 132.1 (8) | C17B—O4B—C18B | 110.3 (7) |
C3B—C4B—S1B | 110.3 (6) | C1A—S1A—C4A | 91.2 (4) |
C5B—C4B—S1B | 117.5 (6) | C1B—S1B—C4B | 90.7 (4) |
Cl1A—C1A—C2A—C3A | −179.5 (6) | C15A—C10A—N2A—C9A | −18.4 (11) |
S1A—C1A—C2A—C3A | −0.4 (9) | C11A—C10A—N2A—C9A | 161.4 (8) |
C1A—C2A—C3A—C4A | 0.2 (11) | C15A—C10A—N2A—C8A | 160.6 (7) |
C2A—C3A—C4A—C5A | 180.0 (9) | C11A—C10A—N2A—C8A | −19.5 (10) |
C2A—C3A—C4A—S1A | 0.1 (10) | C7A—C8A—N2A—C9A | −1.0 (8) |
C3A—C4A—C5A—O1A | 172.0 (10) | C7A—C8A—N2A—C10A | 179.8 (6) |
S1A—C4A—C5A—O1A | −8.1 (12) | O5A—C19A—N3A—C13A | −4.1 (12) |
C3A—C4A—C5A—N1A | −8.0 (15) | C18A—C19A—N3A—C13A | 177.6 (8) |
S1A—C4A—C5A—N1A | 171.9 (6) | O5A—C19A—N3A—C16A | 175.3 (9) |
N1A—C6A—C7A—O2A | −67.0 (8) | C18A—C19A—N3A—C16A | −2.9 (12) |
N1A—C6A—C7A—C8A | 177.1 (6) | C12A—C13A—N3A—C19A | −117.5 (9) |
O2A—C7A—C8A—N2A | 5.4 (7) | C14A—C13A—N3A—C19A | 67.9 (10) |
C6A—C7A—C8A—N2A | 124.3 (6) | C12A—C13A—N3A—C16A | 63.0 (11) |
C15A—C10A—C11A—C12A | −2.2 (13) | C14A—C13A—N3A—C16A | −111.6 (10) |
N2A—C10A—C11A—C12A | 178.0 (8) | C17A—C16A—N3A—C19A | −19.1 (12) |
C10A—C11A—C12A—C13A | 1.1 (13) | C17A—C16A—N3A—C13A | 160.4 (7) |
C11A—C12A—C13A—C14A | 1.0 (12) | O1B—C5B—N1B—C6B | 10.8 (13) |
C11A—C12A—C13A—N3A | −173.7 (8) | C4B—C5B—N1B—C6B | −166.0 (7) |
C12A—C13A—C14A—C15A | −2.0 (12) | C7B—C6B—N1B—C5B | −106.8 (9) |
N3A—C13A—C14A—C15A | 172.7 (8) | O3B—C9B—N2B—C10B | 7.6 (12) |
C11A—C10A—C15A—C14A | 1.2 (12) | O2B—C9B—N2B—C10B | −176.3 (6) |
N2A—C10A—C15A—C14A | −179.0 (7) | O3B—C9B—N2B—C8B | −168.0 (8) |
C13A—C14A—C15A—C10A | 1.0 (12) | O2B—C9B—N2B—C8B | 8.1 (8) |
N3A—C16A—C17A—O4A | 54.0 (11) | C11B—C10B—N2B—C9B | −157.4 (7) |
O4A—C18A—C19A—O5A | 173.5 (8) | C15B—C10B—N2B—C9B | 29.2 (11) |
O4A—C18A—C19A—N3A | −8.2 (11) | C11B—C10B—N2B—C8B | 17.8 (11) |
S1B—C1B—C2B—C3B | −1.8 (10) | C15B—C10B—N2B—C8B | −155.6 (7) |
Cl1B—C1B—C2B—C3B | −179.5 (6) | C7B—C8B—N2B—C9B | −20.0 (8) |
C1B—C2B—C3B—C4B | 1.1 (11) | C7B—C8B—N2B—C10B | 164.2 (6) |
C2B—C3B—C4B—C5B | 176.6 (8) | O5B—C19B—N3B—C13B | 0.8 (12) |
C2B—C3B—C4B—S1B | 0.1 (10) | C18B—C19B—N3B—C13B | −177.4 (7) |
C3B—C4B—C5B—O1B | −169.2 (9) | O5B—C19B—N3B—C16B | −179.3 (9) |
S1B—C4B—C5B—O1B | 7.1 (11) | C18B—C19B—N3B—C16B | 2.5 (12) |
C3B—C4B—C5B—N1B | 7.7 (13) | C12B—C13B—N3B—C19B | 114.8 (9) |
S1B—C4B—C5B—N1B | −176.0 (6) | C14B—C13B—N3B—C19B | −67.9 (10) |
N1B—C6B—C7B—O2B | −59.1 (9) | C12B—C13B—N3B—C16B | −65.2 (10) |
N1B—C6B—C7B—C8B | −173.0 (6) | C14B—C13B—N3B—C16B | 112.2 (9) |
O2B—C7B—C8B—N2B | 23.1 (7) | C17B—C16B—N3B—C19B | 18.5 (13) |
C6B—C7B—C8B—N2B | 142.1 (6) | C17B—C16B—N3B—C13B | −161.5 (8) |
C15B—C10B—C11B—C12B | 1.5 (11) | O3A—C9A—O2A—C7A | −172.5 (7) |
N2B—C10B—C11B—C12B | −172.1 (7) | N2A—C9A—O2A—C7A | 8.0 (8) |
C10B—C11B—C12B—C13B | −0.8 (13) | C6A—C7A—O2A—C9A | −129.8 (6) |
C11B—C12B—C13B—C14B | −0.7 (12) | C8A—C7A—O2A—C9A | −8.2 (8) |
C11B—C12B—C13B—N3B | 176.6 (7) | C16A—C17A—O4A—C18A | −67.0 (11) |
C12B—C13B—C14B—C15B | 1.4 (11) | C19A—C18A—O4A—C17A | 44.0 (11) |
N3B—C13B—C14B—C15B | −175.9 (7) | O3B—C9B—O2B—C7B | −175.1 (6) |
C11B—C10B—C15B—C14B | −0.8 (10) | N2B—C9B—O2B—C7B | 8.5 (7) |
N2B—C10B—C15B—C14B | 172.8 (7) | C6B—C7B—O2B—C9B | −139.8 (6) |
C13B—C14B—C15B—C10B | −0.6 (11) | C8B—C7B—O2B—C9B | −20.3 (7) |
N3B—C16B—C17B—O4B | −53.3 (11) | C16B—C17B—O4B—C18B | 68.4 (10) |
O4B—C18B—C19B—O5B | −167.4 (7) | C19B—C18B—O4B—C17B | −46.9 (9) |
O4B—C18B—C19B—N3B | 10.9 (10) | C2A—C1A—S1A—C4A | 0.4 (7) |
O1A—C5A—N1A—C6A | −4.0 (13) | Cl1A—C1A—S1A—C4A | 179.5 (5) |
C4A—C5A—N1A—C6A | 176.0 (6) | C3A—C4A—S1A—C1A | −0.2 (7) |
C7A—C6A—N1A—C5A | −171.1 (7) | C5A—C4A—S1A—C1A | 179.8 (6) |
O3A—C9A—N2A—C10A | −4.6 (13) | C2B—C1B—S1B—C4B | 1.6 (7) |
O2A—C9A—N2A—C10A | 174.9 (6) | Cl1B—C1B—S1B—C4B | 179.4 (5) |
O3A—C9A—N2A—C8A | 176.3 (8) | C3B—C4B—S1B—C1B | −0.9 (7) |
O2A—C9A—N2A—C8A | −4.2 (8) | C5B—C4B—S1B—C1B | −178.0 (6) |
D—H···A | D—H | H···A | D···A | D—H···A |
N1A—H1A···O3B | 0.86 | 2.16 | 3.008 (11) | 169 |
N1B—H1B···O3A | 0.86 | 2.22 | 3.016 (11) | 153 |
C3A—H3A···O3B | 0.93 | 2.48 | 3.357 (11) | 157 |
C6B—H6B1···O5Ai | 0.97 | 2.41 | 3.227 (10) | 141 |
C7A—H7A···O5Bii | 0.98 | 2.41 | 3.288 (8) | 149 |
C8A—H8A2···O1Biii | 0.97 | 2.52 | 3.459 (11) | 163 |
C8B—H8B1···O1Aiv | 0.97 | 2.15 | 2.961 (12) | 140 |
Symmetry codes: (i) x−1, y, z; (ii) x+1, y, z; (iii) x, y+1, z; (iv) x, y−1, z. |
Acknowledgements
The authors thank the Zhejiang Jingxin Pharmaceutical Co. Ltd for support in the form of raw materials.
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