research communications
Crystal structures of tetrakis(pyridine-4-thioamide-κN)bis(thiocyanato-κN)cobalt(II) monohydrate and bis(pyridine-4-thioamide-κN)bis(thiocyanato-κN)zinc(II)
aInstitut für Anorganische Chemie, Christian-Albrechts-Universität Kiel, Max-Eyth Str. 2, D-24118 Kiel, Germany
*Correspondence e-mail: t.neumann@ac.uni-kiel.de
Reaction of Co(NCS)2 and Zn(NCS)2 with 4-pyridinethioamide led to the formation of compounds with composition [Co(NCS)2(C6H6N2S)4]·H2O (1) and [Zn(NCS)2(C6H6N2S)2] (2), respectively. The of compound 1, consists of one cobalt(II) cation, two thiocyanate anions, four 4-pyridinethioamide ligands and one water molecule whereas that of compound 2 comprises one zinc(II) cation that is located on a twofold rotation axis as well as one thiocyanate anion and one 4-pyridinethioamide ligand in general positions. In the structure of compound 1, the cobalt(II) cations are octahedrally coordinated by two terminal N-bonding thiocyanate anions and by the N atoms of four 4-pyridinethioamide ligands, resulting in discrete and slightly distorted octahedral complexes. These complexes are linked into a three-dimensional network via intermolecular N—H⋯S hydrogen bonding between the amino H atoms and the thiocyanate S atoms. From this arrangement, channels are formed in which the water molecules are embedded and linked to the host structure by intermolecular O—H⋯S and N—H⋯O hydrogen bonding. In the structure of compound 2, the zinc(II) cations are tetrahedrally coordinated by two N-bonding thiocyanate anions and the N atoms of two 4-pyridinethioamide ligands into discrete complexes. These complexes are likewise connected into a three-dimensional network by intermolecular N—H⋯S hydrogen bonding between the amino H atoms and the thioamide S atoms.
1. Chemical context
Thio- and selenocyanate anions are useful ligands for the synthesis of new coordination compounds and polymers, because of their versatile coordination behaviour (Massoud et al., 2013; Mousavi et al., 2012; Prananto et al., 2017; Kabešová et al., 1995). In this regard, compounds with general composition [M(NCS)2(L)2]n (M = MnII, FeII, CoII or NiII; L = neutral N-donor co-ligand) in which the metal cations are linked by these anionic ligands are of special interest, because magnetic exchange can be mediated (Palion-Gazda et al., 2015; Wöhlert et al., 2013a). In this context, we are especially interested in cobalt(II) compounds in which the metal cations are octahedrally coordinated by two neutral co-ligands and four anionic ligands, which link the central metal cations into chains by pairs of anionic ligands, as symbolized in Fig. 1. Some of these compounds show a slow relaxation of the magnetization, which in most cases can be traced back to single-chain magnetism (Rams et al., 2017a,b; Wöhlert et al., 2012, 2013b). To study the influence of the neutral co-ligand on the magnetic properties, different pyridine derivatives substituted in the 4-position such as 4-benzoylpyridine, 4-vinylpyridine, 4-acetylpyridine, 4-ethylpyridine were investigated (Rams et al., 2017b; Werner et al., 2015; Wöhlert et al., 2014). It was found that all these compounds can be divided magnetically into two groups, even if the same Co(NCS)2 chains are observed. In one group, the compounds exhibit an antiferromagnetic ground state and the relaxations observed in the magnetic measurements can be attributed to those of single chains. In the second group, the compounds show a ferromagnetic ground state and the relaxations observed at zero field do not correspond to single-chain relaxations. To gain a better insight into this behaviour, additional examinations of such chain compounds are required, which is of extraordinary importance for our project.
Therefore we became interested in the monodentate ligand 4-pyridinethioamide. In contrast to all ligands used previously, this ligand might be able to link the Co(NCS)2 chains into layers by pairs of intermolecular hydrogen bonds between the amino H atoms and the thioamide S atom, which is observed, for example, in the of the pure ligand (Colleter & Gadret, 1967; Eccles et al., 2014). It should be noted that only one such coordination polymer, namely with 4-pyridinethioamide and Cd, is reported in the literature (Neumann et al., 2016). Here the CdII cations are linked by pairs of anionic ligands into a linear chain, which corresponds exactly to the structure we are interested in. However, irrespective of the ratio between Co(NCS)2 and the co-ligand, a compound with composition Co(NCS)2(4-pyridinethioamide)2 could not be obtained from solution. IR spectroscopic studies of all products showed bands for the CN stretching vibrations at about 2060 cm−1, thus indicating only terminal N-coordinating anionic ligands. Therefore the formation of compounds with bridging anionic ligands can be excluded (Bailey et al., 1971), presumably because cobalt shows no high affinity to bond with sulfur atoms. Hence the formation of discrete complexes with only terminal N-bonding thiocyanate anions is preferred. The situation is reversed for cadmium, which shows a high affinity to sulfur, and this is obviously the reason why a cadmium compound with a chain structure can easily be obtained from solution. In an alternative approach we tried to synthesize discrete complexes with terminal N-bonding thiocyanate anions and with additional N-donor co-ligand in the coordination sphere, or mixed ligand complexes with 4-pyridinethioamide and other volatile ligands e.g. water. Such compounds can easily be transformed into compounds with anion bridges by thermal annealing, as shown previously (Suckert et al., 2017). In most of these cases, half of the N-bonding co-ligands are replaced by the sulfur atom of the (then bridging) thiocyanate anion, thus enabling the coordination number of 6 to be maintained. In the course of these investigations, crystals of [Co(NCS)2(C6H6N2S)4]·H2O (1) were obtained from aqueous solution and characterized by single crystal X-ray diffraction, which revealed the formation of a discrete complex. Unfortunately, the powder pattern of all batches revealed multi-phase formation, and in several cases large amounts of the 4-pyridinethioamide ligand were present in the products (see Fig. S1 in the supporting information).
CoII sometimes forms discrete complexes with composition Co(NCS)2(L)2 in which the cations are tetrahedrally coordinated by two terminal N-bonding thiocyanate anions and the N atoms of two neutral co-ligands. In several cases these complexes are isotypic with the corresponding zinc analogues, which enables a simple method for checking whether a tetrahedral Co complex might be present in the mixture. Hence we synthesized a compound with composition [Zn(NCS)2(C6H6N2S)4] (1) that shows the expected tetrahedral coordination of zinc(II). However, the calculated X-ray powder diffraction pattern of 2 does not match with the additional reflections observed in some of the X-ray powder diffraction pattern of products obtained during synthesis of 1. Because of the unknown phase(s), no further investigations were performed.
2. Structural commentary
The 1 consists of one CoII cation, two thiocyanate anions, one water molecule and four 4-pyridinethioamide co-ligands. The CoII cations are sixfold coordinated by two terminal N-bonding thiocyanate anions and the N atoms of four 4-pyridinethioamide ligands, forming discrete octahedral complexes, in which all coordinating atoms are in trans-positions (Fig. 2). This corresponds to the most common arrangement for structures of compounds with general composition M(NCS)2(L)4, where M is a divalent 3d metal cation and L a monodentate N-donor co-ligand (Małecki, et al., 2011). In this context, it is noted that for bridging N-donor co-ligands, like pyrazine or 4,4′-bipyridine, two-dimensional networks are obtained, in which the anionic ligands are still terminal coordinating (Real et al., 1991; Lu et al., 1997). The Co—N bond lengths to the thiocyanate anions of 2.0944 (18) and 2.0956 (19) Å are significantly shorter than those to the pyridine N atoms of the 4-pyridinethioamide ligand [2.1640 (16) – 2.1761 (16) Å], which is in agreement with related coordination modes reported in the literature (Table 1; Goodgame et al., 2003; Prananto et al., 2017). The bond angles around the central metal cation deviate from the ideal values, indicating a slight distortion (Table 1). For each co-ligand, the thioamide group is rotated differently out of the pyridine ring plane, with dihedral angles of 11.8 (2), 55.5 (1), 40.1 (2) and 38.3 (1)°.
of compound
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In the structure of compound 2, the consists of a ZnII cation that is located on a twofold rotation axis, and one thiocyanate anion as well as one 4-pyridinethioamide ligand in general positions. The ZnII cation is coordinated by the N atoms of two anionic and two neutral co-ligands within a slightly distorted tetrahedron (Fig. 3). Bond lengths and angles (Table 2) are in agreement with values retrieved from the literature. The dihedral angle between the thioamide group and the pyridine ring is 43.8 (4)°.
3. Supramolecular features
In the crystal of compound 1, the discrete complexes are linked by centrosymmetric pairs of intermolecular N—H⋯S hydrogen bonds between the amino H atoms and the thiocyanate S atoms into chains extending parallel to [100], which are further connected by additional N—H⋯S hydrogen bonds into a three-dimensional network (Fig. 4 and Table 3). By this arrangement, channels along the a axis are formed in which the water molecules are located (Fig. 4). These solvent molecules are linked to the network via intermolecular O—H⋯S hydrogen bonding between the water H atoms and the thiocyanate S atoms (Table 3). The water molecules additionally act as acceptors for N—H⋯O hydrogen bonding to the amino H atoms. There are additional short contacts between some of the aromatic hydrogen atoms and the thiocyanate S atoms (Table 3).
In the crystal of compound 2, the discrete complexes are linked by intermolecular N—H⋯S hydrogen-bonding interactions between the H atoms of the amino group and thioamide (S1) and thiocyanate (S11) S atoms, so forming a three-dimensional hydrogen-bonded framework (Fig. 5 and Table 4). There is also a weak C15—H15⋯S1ii interaction present within the framework (Table 4.
4. Database survey
There is only one cobalt thiocyanate compound with 4-pyridinethioamide reported in the Cambridge Structure Database (Version 5.39; Groom et al., 2016). In tetrakis(pyridine-4-carbothioamide-κN1)bis-(thiocyanato-κN)cobalt(II) methanol monosolvate, the CoII cations are octahedrally coordinated by four pyridine-4-carbothioamide ligands and two thiocyanate anions, and the solvent molecules are located in the cavities of the structure (Neumann et al., 2017). Moreover, there is one compound with cadmium, in which the CdII cations are octahedrally coordinated by two terminal N-bonding pyridinethioamide ligands and four thiocyanate anions and linked by pairs of anionic ligands into linear chains (Neumann et al., 2016). Other coordination compounds with this ligand are unknown. Therefore, the title compound is the third structurally characterized coordination compound with 4-pyridinethioamide as a ligand. However, the pure 4-pyridinethioamide ligand is also known and in its structure the molecules are linked by pairs of hydrogen bonds between the amino H atoms and the thioamide S atom (Colleter & Gadret, 1967; Eccles et al., 2014). Finally, the protonated form with iodine as counter-anion was reported by Shotonwa & Boeré (2014).
5. Synthesis and crystallization
Co(NCS)2 and 4-pyridinethioamide were purchased from Alfa Aesar. Zn(NCS)2 was prepared by the reaction of equimolar amounts of Ba(SCN)2·3H2O with ZnSO4·H2O in water. The white precipitate of BaSO4 was filtered off, and the resulting clear solution was evaporated until complete dryness. The purity of the obtained Zn(NCS)2 was checked by X-ray powder diffraction (XRPD) measurements.
Crystals of compound 1 were obtained by the reaction of 8.8 mg of Co(NCS)2 (0.05 mmol) with 6.9 mg of 4-pyridinethioamide (0.05 mmol) in a mixture of 1 ml of methanol and 1 ml of water. The reaction mixture was heated to boiling and then slowly cooled to ambient temperature, leading to crystals of the title compound suitable for single crystal X-ray diffraction. XRPD revealed impurities by crystals of the employed 4-pyridinethioamide ligand as the major phase (see Fig. S1 in the supporting information). Some crystals were selected by hand to measure an infrared spectrum (see Fig. S2 in the supporting information). We also tried to obtain pure samples by using different amounts of Co(NCS)2 and 4-pyridinethioamide, however without any success.
For the synthesis of compound 2, 18.2 mg Zn(NCS)2 (0.1 mmol) were reacted with 6.9 mg of 4-pyridinethioamide (0.05 mmol) in 1.0 ml of water which was then overlayed with 1.0 ml of chloroform. After a few days, crystals suitable for single crystal X-ray diffraction formed at the interface of the solvents.
6. Refinement
Crystal data, data collection and structure . For both compounds, the aromatic hydrogen atoms were positioned with idealized geometry and were refined with Uiso(H) = 1.2Ueq(C) using a riding model. The N—H and O—H hydrogen atoms were located in difference-Fourier maps. For compound 1, their bond lengths were set to ideal values (N—H = 0.88 Å, O—H = 0.84 Å), and refined with Uiso(H) = 1.5Ueq(N,O) using a riding model. For compound 2, the N—H atoms were initially refined and then held fixed (N—H = 1.01 and 1.03 Å) and refined with Uiso(H) = 1.5Ueq(N,O) using a riding model. The of compound 2 was determined by [Flack parameter = 0.014 (18); Table 5].
details are summarized in Table 5
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Supporting information
https://doi.org/10.1107/S205698901800021X/wm5430sup1.cif
contains datablocks 1, 2. DOI:Structure factors: contains datablock 1. DOI: https://doi.org/10.1107/S205698901800021X/wm54301sup2.hkl
Structure factors: contains datablock 2. DOI: https://doi.org/10.1107/S205698901800021X/wm54302sup3.hkl
Fig. S1 Experimental XRPD pattern of a batch of compound 1 and calculated pattern for 1 and for the 4-pyridinethioamide ligand. DOI: https://doi.org/10.1107/S205698901800021X/wm5430sup4.pdf
Fig. S2 Infrared spectra of 1, measured from crystals selected by hand. Given is the value of the CN stretching vibration. DOI: https://doi.org/10.1107/S205698901800021X/wm5430sup5.pdf
For both structures, data collection: X-AREA (Stoe, 2008); cell
X-AREA (Stoe, 2008); data reduction: X-AREA (Stoe, 2008); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL2014 (Sheldrick, 2015); molecular graphics: DIAMOND (Brandenburg, 1990); software used to prepare material for publication: publCIF (Westrip, 2010).[Co(NCS)2(C6H6N2S)4]·H2O | F(000) = 1532 |
Mr = 745.89 | Dx = 1.477 Mg m−3 |
Monoclinic, P21/n | Mo Kα radiation, λ = 0.71073 Å |
a = 10.9256 (2) Å | Cell parameters from 7301 reflections |
b = 12.9595 (6) Å | θ = 3.1–54.0° |
c = 24.1116 (6) Å | µ = 0.92 mm−1 |
β = 100.763 (2)° | T = 200 K |
V = 3353.91 (19) Å3 | Block, light red |
Z = 4 | 0.18 × 0.14 × 0.11 mm |
Stoe IPDS-2 diffractometer | 6291 reflections with I > 2σ(I) |
ω scans | Rint = 0.031 |
Absorption correction: numerical (X-RED32 and X-SHAPE; Stoe, 2008) | θmax = 27.0°, θmin = 1.7° |
Tmin = 0.787, Tmax = 0.886 | h = −13→13 |
35796 measured reflections | k = −16→16 |
7301 independent reflections | l = −30→30 |
Refinement on F2 | 0 restraints |
Least-squares matrix: full | Hydrogen site location: mixed |
R[F2 > 2σ(F2)] = 0.036 | H-atom parameters constrained |
wR(F2) = 0.078 | w = 1/[σ2(Fo2) + (0.033P)2 + 1.8302P] where P = (Fo2 + 2Fc2)/3 |
S = 1.07 | (Δ/σ)max = 0.001 |
7301 reflections | Δρmax = 0.37 e Å−3 |
397 parameters | Δρmin = −0.38 e Å−3 |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
x | y | z | Uiso*/Ueq | ||
Co1 | 0.56386 (2) | 0.32716 (2) | 0.65116 (2) | 0.02828 (7) | |
N1 | 0.50992 (16) | 0.18701 (14) | 0.68256 (8) | 0.0350 (4) | |
C1 | 0.50476 (18) | 0.11498 (17) | 0.71023 (9) | 0.0334 (4) | |
S1 | 0.49655 (7) | 0.01363 (5) | 0.74981 (3) | 0.05452 (17) | |
N2 | 0.62178 (16) | 0.47098 (14) | 0.62584 (8) | 0.0362 (4) | |
C2 | 0.65867 (18) | 0.55240 (17) | 0.61831 (9) | 0.0340 (4) | |
S2 | 0.71112 (5) | 0.66765 (5) | 0.60707 (3) | 0.05095 (16) | |
N11 | 0.37335 (14) | 0.35882 (13) | 0.61109 (7) | 0.0310 (3) | |
C11 | 0.30074 (18) | 0.28333 (16) | 0.58515 (9) | 0.0353 (4) | |
H11 | 0.3365 | 0.2171 | 0.5823 | 0.042* | |
C12 | 0.17590 (18) | 0.29742 (16) | 0.56226 (9) | 0.0356 (4) | |
H12 | 0.1281 | 0.2420 | 0.5436 | 0.043* | |
C13 | 0.12101 (17) | 0.39272 (15) | 0.56661 (8) | 0.0284 (4) | |
C14 | 0.19731 (19) | 0.47126 (16) | 0.59235 (10) | 0.0383 (5) | |
H14 | 0.1644 | 0.5384 | 0.5955 | 0.046* | |
C15 | 0.32153 (19) | 0.45127 (17) | 0.61330 (10) | 0.0388 (5) | |
H15 | 0.3726 | 0.5064 | 0.6302 | 0.047* | |
C16 | −0.01659 (17) | 0.40709 (15) | 0.54605 (8) | 0.0309 (4) | |
S16 | −0.10407 (5) | 0.31858 (4) | 0.50805 (2) | 0.03728 (12) | |
N16 | −0.06492 (15) | 0.49408 (14) | 0.56133 (8) | 0.0361 (4) | |
H1N | −0.1449 | 0.5073 | 0.5508 | 0.054* | |
H2N | −0.0220 | 0.5408 | 0.5833 | 0.054* | |
N21 | 0.53727 (15) | 0.39399 (13) | 0.73071 (7) | 0.0318 (3) | |
C21 | 0.43666 (18) | 0.37052 (17) | 0.75246 (9) | 0.0348 (4) | |
H21 | 0.3684 | 0.3381 | 0.7286 | 0.042* | |
C22 | 0.42671 (19) | 0.39088 (17) | 0.80772 (9) | 0.0344 (4) | |
H22 | 0.3534 | 0.3730 | 0.8214 | 0.041* | |
C23 | 0.52596 (18) | 0.43786 (15) | 0.84273 (8) | 0.0305 (4) | |
C24 | 0.62852 (19) | 0.46660 (17) | 0.82001 (9) | 0.0354 (4) | |
H24 | 0.6963 | 0.5020 | 0.8425 | 0.042* | |
C25 | 0.63077 (19) | 0.44304 (16) | 0.76421 (9) | 0.0337 (4) | |
H25 | 0.7017 | 0.4625 | 0.7491 | 0.040* | |
C26 | 0.51995 (18) | 0.45985 (16) | 0.90307 (8) | 0.0322 (4) | |
S26 | 0.53825 (5) | 0.58106 (4) | 0.92626 (2) | 0.03722 (12) | |
N26 | 0.49702 (18) | 0.38057 (14) | 0.93325 (8) | 0.0396 (4) | |
H3N | 0.4892 | 0.3904 | 0.9685 | 0.059* | |
H4N | 0.4850 | 0.3200 | 0.9167 | 0.059* | |
N31 | 0.75564 (14) | 0.28842 (13) | 0.68796 (7) | 0.0302 (3) | |
C31 | 0.78932 (18) | 0.23749 (16) | 0.73696 (8) | 0.0333 (4) | |
H31 | 0.7276 | 0.2243 | 0.7591 | 0.040* | |
C32 | 0.90894 (18) | 0.20355 (16) | 0.75667 (9) | 0.0328 (4) | |
H32 | 0.9293 | 0.1692 | 0.7920 | 0.039* | |
C33 | 0.99949 (17) | 0.22025 (15) | 0.72412 (8) | 0.0298 (4) | |
C34 | 0.96583 (18) | 0.27467 (16) | 0.67424 (8) | 0.0322 (4) | |
H34 | 1.0257 | 0.2890 | 0.6513 | 0.039* | |
C35 | 0.84442 (18) | 0.30784 (16) | 0.65808 (8) | 0.0323 (4) | |
H35 | 0.8229 | 0.3463 | 0.6241 | 0.039* | |
C36 | 1.12841 (18) | 0.17958 (16) | 0.74238 (9) | 0.0344 (4) | |
S36 | 1.19683 (5) | 0.18531 (5) | 0.80975 (3) | 0.04698 (14) | |
N36 | 1.18076 (17) | 0.14209 (16) | 0.70151 (9) | 0.0458 (5) | |
H5N | 1.1414 | 0.1379 | 0.6662 | 0.069* | |
H6N | 1.2580 | 0.1195 | 0.7067 | 0.069* | |
N41 | 0.58869 (15) | 0.25150 (13) | 0.57362 (7) | 0.0324 (4) | |
C41 | 0.6140 (2) | 0.15032 (17) | 0.57289 (9) | 0.0396 (5) | |
H41 | 0.6274 | 0.1137 | 0.6076 | 0.048* | |
C42 | 0.6215 (2) | 0.09683 (18) | 0.52419 (9) | 0.0403 (5) | |
H42 | 0.6413 | 0.0254 | 0.5257 | 0.048* | |
C43 | 0.59981 (17) | 0.14867 (17) | 0.47296 (9) | 0.0337 (4) | |
C44 | 0.57594 (19) | 0.25345 (17) | 0.47372 (9) | 0.0364 (4) | |
H44 | 0.5627 | 0.2920 | 0.4396 | 0.044* | |
C45 | 0.57158 (19) | 0.30155 (16) | 0.52443 (9) | 0.0345 (4) | |
H45 | 0.5556 | 0.3736 | 0.5243 | 0.041* | |
C46 | 0.60338 (19) | 0.09230 (17) | 0.41907 (9) | 0.0374 (5) | |
S46 | 0.70646 (6) | 0.00009 (5) | 0.41673 (3) | 0.05019 (15) | |
N46 | 0.51894 (19) | 0.12246 (17) | 0.37506 (8) | 0.0481 (5) | |
H7N | 0.4664 | 0.1733 | 0.3767 | 0.072* | |
H8N | 0.5204 | 0.0945 | 0.3419 | 0.072* | |
O1 | 0.01279 (14) | 0.67371 (12) | 0.63019 (7) | 0.0425 (4) | |
H2O1 | 0.0695 | 0.6686 | 0.6588 | 0.064* | |
H1O1 | −0.0504 | 0.6648 | 0.6448 | 0.064* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Co1 | 0.02703 (12) | 0.03082 (14) | 0.02647 (13) | 0.00297 (10) | 0.00368 (9) | −0.00167 (10) |
N1 | 0.0347 (8) | 0.0343 (9) | 0.0356 (9) | −0.0011 (7) | 0.0053 (7) | −0.0004 (7) |
C1 | 0.0310 (9) | 0.0368 (11) | 0.0320 (10) | 0.0019 (8) | 0.0050 (8) | −0.0077 (9) |
S1 | 0.0897 (5) | 0.0383 (3) | 0.0367 (3) | −0.0010 (3) | 0.0148 (3) | 0.0037 (2) |
N2 | 0.0357 (9) | 0.0364 (10) | 0.0364 (9) | 0.0014 (7) | 0.0068 (7) | 0.0007 (7) |
C2 | 0.0276 (9) | 0.0423 (12) | 0.0330 (10) | 0.0064 (8) | 0.0076 (8) | 0.0012 (9) |
S2 | 0.0403 (3) | 0.0413 (3) | 0.0735 (4) | 0.0019 (2) | 0.0164 (3) | 0.0135 (3) |
N11 | 0.0283 (8) | 0.0305 (8) | 0.0332 (9) | 0.0038 (6) | 0.0033 (6) | −0.0007 (7) |
C11 | 0.0310 (10) | 0.0292 (10) | 0.0449 (12) | 0.0031 (8) | 0.0050 (8) | −0.0045 (9) |
C12 | 0.0305 (9) | 0.0309 (11) | 0.0448 (12) | −0.0018 (8) | 0.0056 (8) | −0.0040 (9) |
C13 | 0.0289 (9) | 0.0295 (10) | 0.0271 (9) | 0.0004 (7) | 0.0060 (7) | 0.0030 (7) |
C14 | 0.0341 (10) | 0.0283 (10) | 0.0496 (13) | 0.0050 (8) | 0.0002 (9) | −0.0029 (9) |
C15 | 0.0327 (10) | 0.0311 (11) | 0.0492 (13) | 0.0029 (8) | −0.0010 (9) | −0.0074 (9) |
C16 | 0.0309 (9) | 0.0316 (10) | 0.0311 (10) | −0.0001 (8) | 0.0079 (8) | 0.0065 (8) |
S16 | 0.0319 (2) | 0.0361 (3) | 0.0416 (3) | −0.0025 (2) | 0.0012 (2) | −0.0011 (2) |
N16 | 0.0287 (8) | 0.0348 (9) | 0.0441 (10) | 0.0032 (7) | 0.0056 (7) | −0.0021 (8) |
N21 | 0.0340 (8) | 0.0332 (9) | 0.0291 (8) | 0.0002 (7) | 0.0083 (7) | −0.0033 (7) |
C21 | 0.0311 (9) | 0.0407 (11) | 0.0331 (10) | −0.0035 (8) | 0.0073 (8) | −0.0054 (9) |
C22 | 0.0330 (9) | 0.0380 (11) | 0.0337 (10) | −0.0050 (8) | 0.0104 (8) | −0.0022 (8) |
C23 | 0.0365 (10) | 0.0264 (9) | 0.0297 (10) | 0.0024 (8) | 0.0089 (8) | 0.0009 (7) |
C24 | 0.0363 (10) | 0.0363 (11) | 0.0337 (10) | −0.0074 (8) | 0.0069 (8) | −0.0058 (8) |
C25 | 0.0352 (10) | 0.0350 (11) | 0.0333 (10) | −0.0051 (8) | 0.0121 (8) | −0.0050 (8) |
C26 | 0.0344 (10) | 0.0342 (11) | 0.0284 (10) | 0.0009 (8) | 0.0070 (8) | 0.0004 (8) |
S26 | 0.0519 (3) | 0.0308 (3) | 0.0302 (2) | −0.0042 (2) | 0.0112 (2) | −0.0028 (2) |
N26 | 0.0589 (11) | 0.0319 (9) | 0.0301 (9) | −0.0003 (8) | 0.0136 (8) | 0.0011 (7) |
N31 | 0.0277 (7) | 0.0349 (9) | 0.0278 (8) | 0.0033 (7) | 0.0047 (6) | 0.0004 (7) |
C31 | 0.0301 (9) | 0.0403 (11) | 0.0297 (10) | −0.0003 (8) | 0.0060 (7) | 0.0031 (8) |
C32 | 0.0316 (9) | 0.0362 (11) | 0.0292 (10) | 0.0002 (8) | 0.0022 (8) | 0.0037 (8) |
C33 | 0.0277 (9) | 0.0268 (9) | 0.0338 (10) | −0.0011 (7) | 0.0028 (7) | −0.0025 (8) |
C34 | 0.0307 (9) | 0.0355 (11) | 0.0316 (10) | 0.0008 (8) | 0.0084 (8) | 0.0008 (8) |
C35 | 0.0329 (9) | 0.0369 (11) | 0.0274 (9) | 0.0022 (8) | 0.0062 (7) | 0.0021 (8) |
C36 | 0.0276 (9) | 0.0282 (10) | 0.0461 (12) | −0.0017 (8) | 0.0032 (8) | 0.0020 (9) |
S36 | 0.0340 (3) | 0.0548 (4) | 0.0469 (3) | 0.0003 (2) | −0.0058 (2) | 0.0079 (3) |
N36 | 0.0307 (9) | 0.0502 (12) | 0.0555 (12) | 0.0077 (8) | 0.0058 (8) | −0.0066 (9) |
N41 | 0.0303 (8) | 0.0368 (9) | 0.0290 (8) | 0.0061 (7) | 0.0031 (6) | −0.0039 (7) |
C41 | 0.0467 (12) | 0.0394 (12) | 0.0323 (11) | 0.0134 (9) | 0.0062 (9) | 0.0002 (9) |
C42 | 0.0440 (11) | 0.0372 (12) | 0.0398 (12) | 0.0080 (9) | 0.0079 (9) | −0.0042 (9) |
C43 | 0.0269 (9) | 0.0396 (11) | 0.0341 (10) | −0.0016 (8) | 0.0048 (8) | −0.0067 (8) |
C44 | 0.0373 (10) | 0.0389 (11) | 0.0325 (10) | −0.0009 (9) | 0.0050 (8) | −0.0018 (9) |
C45 | 0.0354 (10) | 0.0342 (11) | 0.0327 (10) | 0.0012 (8) | 0.0034 (8) | −0.0025 (8) |
C46 | 0.0373 (10) | 0.0399 (12) | 0.0367 (11) | −0.0070 (9) | 0.0111 (9) | −0.0066 (9) |
S46 | 0.0470 (3) | 0.0524 (4) | 0.0524 (4) | 0.0055 (3) | 0.0126 (3) | −0.0179 (3) |
N46 | 0.0593 (12) | 0.0506 (12) | 0.0334 (10) | 0.0037 (10) | 0.0060 (9) | −0.0092 (9) |
O1 | 0.0393 (8) | 0.0445 (9) | 0.0423 (9) | −0.0037 (7) | 0.0037 (7) | −0.0009 (7) |
Co1—N1 | 2.0944 (18) | C26—N26 | 1.310 (3) |
Co1—N2 | 2.0956 (19) | C26—S26 | 1.667 (2) |
Co1—N11 | 2.1640 (16) | N26—H3N | 0.8801 |
Co1—N41 | 2.1723 (16) | N26—H4N | 0.8800 |
Co1—N21 | 2.1730 (16) | N31—C35 | 1.336 (2) |
Co1—N31 | 2.1761 (16) | N31—C31 | 1.343 (3) |
N1—C1 | 1.155 (3) | C31—C32 | 1.377 (3) |
C1—S1 | 1.636 (2) | C31—H31 | 0.9500 |
N2—C2 | 1.156 (3) | C32—C33 | 1.390 (3) |
C2—S2 | 1.640 (2) | C32—H32 | 0.9500 |
N11—C15 | 1.331 (3) | C33—C34 | 1.384 (3) |
N11—C11 | 1.339 (3) | C33—C36 | 1.491 (3) |
C11—C12 | 1.385 (3) | C34—C35 | 1.380 (3) |
C11—H11 | 0.9500 | C34—H34 | 0.9500 |
C12—C13 | 1.385 (3) | C35—H35 | 0.9500 |
C12—H12 | 0.9500 | C36—N36 | 1.321 (3) |
C13—C14 | 1.387 (3) | C36—S36 | 1.658 (2) |
C13—C16 | 1.504 (3) | N36—H5N | 0.8803 |
C14—C15 | 1.381 (3) | N36—H6N | 0.8800 |
C14—H14 | 0.9500 | N41—C45 | 1.334 (3) |
C15—H15 | 0.9500 | N41—C41 | 1.341 (3) |
C16—N16 | 1.326 (3) | C41—C42 | 1.379 (3) |
C16—S16 | 1.656 (2) | C41—H41 | 0.9500 |
N16—H1N | 0.8799 | C42—C43 | 1.387 (3) |
N16—H2N | 0.8800 | C42—H42 | 0.9500 |
N21—C21 | 1.338 (3) | C43—C44 | 1.384 (3) |
N21—C25 | 1.339 (3) | C43—C46 | 1.497 (3) |
C21—C22 | 1.382 (3) | C44—C45 | 1.381 (3) |
C21—H21 | 0.9500 | C44—H44 | 0.9500 |
C22—C23 | 1.385 (3) | C45—H45 | 0.9500 |
C22—H22 | 0.9500 | C46—N46 | 1.328 (3) |
C23—C24 | 1.387 (3) | C46—S46 | 1.650 (2) |
C23—C26 | 1.496 (3) | N46—H7N | 0.8800 |
C24—C25 | 1.384 (3) | N46—H8N | 0.8802 |
C24—H24 | 0.9500 | O1—H2O1 | 0.8400 |
C25—H25 | 0.9500 | O1—H1O1 | 0.8400 |
N1—Co1—N2 | 175.82 (7) | N21—C25—C24 | 122.76 (18) |
N1—Co1—N11 | 90.78 (7) | N21—C25—H25 | 118.6 |
N2—Co1—N11 | 91.08 (7) | C24—C25—H25 | 118.6 |
N1—Co1—N41 | 90.49 (7) | N26—C26—C23 | 116.01 (18) |
N2—Co1—N41 | 93.31 (7) | N26—C26—S26 | 125.19 (16) |
N11—Co1—N41 | 88.03 (6) | C23—C26—S26 | 118.78 (15) |
N1—Co1—N21 | 86.18 (7) | C26—N26—H3N | 119.2 |
N2—Co1—N21 | 90.00 (7) | C26—N26—H4N | 118.4 |
N11—Co1—N21 | 92.44 (6) | H3N—N26—H4N | 122.3 |
N41—Co1—N21 | 176.64 (7) | C35—N31—C31 | 117.37 (17) |
N1—Co1—N31 | 88.11 (7) | C35—N31—Co1 | 118.52 (13) |
N2—Co1—N31 | 90.22 (7) | C31—N31—Co1 | 123.83 (13) |
N11—Co1—N31 | 176.76 (6) | N31—C31—C32 | 123.17 (18) |
N41—Co1—N31 | 88.93 (6) | N31—C31—H31 | 118.4 |
N21—Co1—N31 | 90.53 (6) | C32—C31—H31 | 118.4 |
C1—N1—Co1 | 163.19 (17) | C31—C32—C33 | 119.03 (18) |
N1—C1—S1 | 179.4 (2) | C31—C32—H32 | 120.5 |
C2—N2—Co1 | 172.22 (18) | C33—C32—H32 | 120.5 |
N2—C2—S2 | 179.5 (2) | C34—C33—C32 | 117.95 (17) |
C15—N11—C11 | 117.21 (17) | C34—C33—C36 | 121.32 (18) |
C15—N11—Co1 | 122.27 (14) | C32—C33—C36 | 120.73 (18) |
C11—N11—Co1 | 120.44 (13) | C35—C34—C33 | 119.33 (18) |
N11—C11—C12 | 122.93 (19) | C35—C34—H34 | 120.3 |
N11—C11—H11 | 118.5 | C33—C34—H34 | 120.3 |
C12—C11—H11 | 118.5 | N31—C35—C34 | 123.07 (18) |
C11—C12—C13 | 119.70 (19) | N31—C35—H35 | 118.5 |
C11—C12—H12 | 120.1 | C34—C35—H35 | 118.5 |
C13—C12—H12 | 120.1 | N36—C36—C33 | 115.24 (19) |
C12—C13—C14 | 117.11 (18) | N36—C36—S36 | 124.65 (16) |
C12—C13—C16 | 120.37 (18) | C33—C36—S36 | 120.10 (16) |
C14—C13—C16 | 122.48 (18) | C36—N36—H5N | 122.8 |
C15—C14—C13 | 119.58 (19) | C36—N36—H6N | 123.6 |
C15—C14—H14 | 120.2 | H5N—N36—H6N | 113.6 |
C13—C14—H14 | 120.2 | C45—N41—C41 | 117.31 (18) |
N11—C15—C14 | 123.4 (2) | C45—N41—Co1 | 121.76 (14) |
N11—C15—H15 | 118.3 | C41—N41—Co1 | 120.79 (14) |
C14—C15—H15 | 118.3 | N41—C41—C42 | 123.2 (2) |
N16—C16—C13 | 116.05 (18) | N41—C41—H41 | 118.4 |
N16—C16—S16 | 121.60 (15) | C42—C41—H41 | 118.4 |
C13—C16—S16 | 122.33 (15) | C41—C42—C43 | 119.2 (2) |
C16—N16—H1N | 120.7 | C41—C42—H42 | 120.4 |
C16—N16—H2N | 123.8 | C43—C42—H42 | 120.4 |
H1N—N16—H2N | 115.4 | C44—C43—C42 | 117.70 (19) |
C21—N21—C25 | 117.49 (17) | C44—C43—C46 | 121.7 (2) |
C21—N21—Co1 | 120.68 (14) | C42—C43—C46 | 120.6 (2) |
C25—N21—Co1 | 120.61 (13) | C45—C44—C43 | 119.5 (2) |
N21—C21—C22 | 123.54 (19) | C45—C44—H44 | 120.2 |
N21—C21—H21 | 118.2 | C43—C44—H44 | 120.2 |
C22—C21—H21 | 118.2 | N41—C45—C44 | 123.1 (2) |
C21—C22—C23 | 118.55 (18) | N41—C45—H45 | 118.5 |
C21—C22—H22 | 120.7 | C44—C45—H45 | 118.5 |
C23—C22—H22 | 120.7 | N46—C46—C43 | 115.02 (19) |
C22—C23—C24 | 118.41 (18) | N46—C46—S46 | 124.22 (17) |
C22—C23—C26 | 120.34 (17) | C43—C46—S46 | 120.76 (17) |
C24—C23—C26 | 121.22 (18) | C46—N46—H7N | 123.1 |
C25—C24—C23 | 119.14 (19) | C46—N46—H8N | 118.4 |
C25—C24—H24 | 120.4 | H7N—N46—H8N | 118.1 |
C23—C24—H24 | 120.4 | H2O1—O1—H1O1 | 100.5 |
D—H···A | D—H | H···A | D···A | D—H···A |
C11—H11···S46i | 0.95 | 2.85 | 3.674 (2) | 145 |
C12—H12···S26ii | 0.95 | 2.94 | 3.695 (2) | 137 |
C14—H14···O1 | 0.95 | 2.65 | 3.531 (3) | 154 |
C15—H15···S36iii | 0.95 | 2.91 | 3.581 (2) | 129 |
N16—H2N···O1 | 0.88 | 2.06 | 2.893 (2) | 159 |
C22—H22···S36iv | 0.95 | 2.96 | 3.668 (2) | 133 |
N26—H3N···S26v | 0.88 | 2.64 | 3.5155 (18) | 179 |
N26—H4N···O1ii | 0.88 | 2.21 | 3.078 (2) | 170 |
N36—H5N···S26vi | 0.88 | 2.78 | 3.618 (2) | 159 |
N36—H6N···S1vii | 0.88 | 2.96 | 3.812 (2) | 165 |
C41—H41···N1 | 0.95 | 2.58 | 3.104 (3) | 115 |
N46—H7N···S2viii | 0.88 | 2.91 | 3.782 (2) | 174 |
N46—H8N···S1i | 0.88 | 2.60 | 3.466 (2) | 170 |
O1—H2O1···S36iii | 0.84 | 2.53 | 3.2356 (16) | 142 |
O1—H1O1···S2iv | 0.84 | 2.59 | 3.2394 (16) | 135 |
Symmetry codes: (i) −x+1, −y, −z+1; (ii) −x+1/2, y−1/2, −z+3/2; (iii) −x+3/2, y+1/2, −z+3/2; (iv) x−1, y, z; (v) −x+1, −y+1, −z+2; (vi) −x+3/2, y−1/2, −z+3/2; (vii) x+1, y, z; (viii) −x+1, −y+1, −z+1. |
[Zn(NCS)2(C6H6N2S)2] | Dx = 1.522 Mg m−3 |
Mr = 457.91 | Mo Kα radiation, λ = 0.71073 Å |
Orthorhombic, Fdd2 | Cell parameters from 6296 reflections |
a = 18.965 (3) Å | θ = 2.0–26.0° |
b = 41.216 (7) Å | µ = 1.66 mm−1 |
c = 5.1117 (7) Å | T = 200 K |
V = 3995.6 (11) Å3 | Block, colorless |
Z = 8 | 0.11 × 0.08 × 0.06 mm |
F(000) = 1856 |
Stoe IPDS-2 diffractometer | 1711 reflections with I > 2σ(I) |
ω scans | Rint = 0.087 |
Absorption correction: numerical (X-RED32 and X-SHAPE; Stoe, 2008) | θmax = 26.0°, θmin = 2.0° |
Tmin = 0.789, Tmax = 0.894 | h = −23→23 |
6296 measured reflections | k = −50→50 |
1919 independent reflections | l = −5→6 |
Refinement on F2 | Hydrogen site location: mixed |
Least-squares matrix: full | H-atom parameters constrained |
R[F2 > 2σ(F2)] = 0.040 | w = 1/[σ2(Fo2) + (0.0506P)2 + 3.6629P] where P = (Fo2 + 2Fc2)/3 |
wR(F2) = 0.109 | (Δ/σ)max < 0.001 |
S = 1.07 | Δρmax = 0.41 e Å−3 |
1919 reflections | Δρmin = −0.36 e Å−3 |
114 parameters | Absolute structure: Flack x determined using 638 quotients [(I+)-(I-)]/[(I+)+(I-)] (Parsons et al., 2013) |
1 restraint | Absolute structure parameter: 0.014 (18) |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
x | y | z | Uiso*/Ueq | ||
Zn1 | 0.7500 | 0.2500 | 0.4335 (2) | 0.0566 (3) | |
N1 | 0.8164 (3) | 0.22371 (14) | 0.2398 (12) | 0.0719 (17) | |
C1 | 0.8585 (3) | 0.20935 (15) | 0.1215 (13) | 0.0598 (15) | |
S1 | 0.91578 (10) | 0.18998 (5) | −0.0532 (5) | 0.0774 (5) | |
N11 | 0.6912 (2) | 0.21920 (10) | 0.6510 (12) | 0.0554 (12) | |
C11 | 0.7150 (3) | 0.18989 (13) | 0.7237 (13) | 0.0572 (14) | |
H11 | 0.7618 | 0.1839 | 0.6781 | 0.069* | |
C12 | 0.6743 (3) | 0.16827 (14) | 0.8614 (13) | 0.0601 (15) | |
H12 | 0.6932 | 0.1479 | 0.9129 | 0.072* | |
C13 | 0.6053 (3) | 0.17635 (12) | 0.9247 (14) | 0.0550 (12) | |
C14 | 0.5813 (3) | 0.20657 (14) | 0.8525 (14) | 0.0616 (16) | |
H14 | 0.5348 | 0.2131 | 0.8962 | 0.074* | |
C15 | 0.6250 (3) | 0.22727 (13) | 0.7169 (15) | 0.0645 (16) | |
H15 | 0.6076 | 0.2480 | 0.6681 | 0.077* | |
C16 | 0.5580 (3) | 0.15290 (13) | 1.0657 (13) | 0.0563 (14) | |
N12 | 0.4930 (3) | 0.15183 (13) | 0.9681 (12) | 0.0618 (13) | |
H1N | 0.4537 | 0.1374 | 1.0313 | 0.093* | |
H2N | 0.4786 | 0.1644 | 0.8012 | 0.093* | |
S11 | 0.58394 (9) | 0.13158 (4) | 1.3212 (4) | 0.0673 (5) |
U11 | U22 | U33 | U12 | U13 | U23 | |
Zn1 | 0.0576 (5) | 0.0490 (4) | 0.0632 (5) | −0.0008 (4) | 0.000 | 0.000 |
N1 | 0.080 (4) | 0.066 (3) | 0.070 (4) | 0.001 (3) | −0.001 (3) | −0.003 (3) |
C1 | 0.063 (4) | 0.060 (3) | 0.057 (4) | 0.003 (3) | −0.001 (3) | −0.003 (3) |
S1 | 0.0802 (11) | 0.0795 (10) | 0.0724 (11) | 0.0212 (9) | 0.0063 (11) | −0.0055 (10) |
N11 | 0.053 (3) | 0.048 (2) | 0.064 (3) | −0.0019 (19) | 0.000 (3) | −0.006 (2) |
C11 | 0.052 (3) | 0.055 (3) | 0.065 (4) | 0.001 (2) | 0.000 (3) | 0.002 (3) |
C12 | 0.053 (3) | 0.056 (3) | 0.071 (4) | 0.003 (3) | 0.000 (3) | 0.007 (3) |
C13 | 0.052 (3) | 0.049 (2) | 0.064 (3) | −0.002 (2) | 0.001 (3) | −0.007 (3) |
C14 | 0.058 (3) | 0.052 (3) | 0.075 (4) | 0.003 (2) | 0.010 (3) | 0.000 (3) |
C15 | 0.060 (3) | 0.045 (2) | 0.088 (5) | 0.004 (2) | 0.009 (4) | 0.002 (3) |
C16 | 0.054 (3) | 0.054 (3) | 0.061 (3) | 0.001 (2) | 0.004 (3) | −0.009 (3) |
N12 | 0.052 (3) | 0.066 (3) | 0.067 (3) | −0.009 (2) | −0.001 (2) | −0.003 (3) |
S11 | 0.0588 (9) | 0.0727 (9) | 0.0705 (10) | 0.0005 (8) | 0.0039 (8) | 0.0091 (9) |
Zn1—N1i | 1.935 (6) | C12—H12 | 0.9500 |
Zn1—N1 | 1.935 (6) | C13—C14 | 1.376 (8) |
Zn1—N11i | 2.022 (5) | C13—C16 | 1.502 (8) |
Zn1—N11 | 2.023 (5) | C14—C15 | 1.376 (9) |
N1—C1 | 1.163 (8) | C14—H14 | 0.9500 |
C1—S1 | 1.617 (7) | C15—H15 | 0.9500 |
N11—C15 | 1.342 (8) | C16—N12 | 1.331 (8) |
N11—C11 | 1.342 (7) | C16—S11 | 1.649 (7) |
C11—C12 | 1.373 (8) | N12—H1N | 1.0078 |
C11—H11 | 0.9500 | N12—H2N | 1.0347 |
C12—C13 | 1.389 (8) | ||
N1i—Zn1—N1 | 118.4 (4) | C13—C12—H12 | 120.2 |
N1i—Zn1—N11i | 106.8 (2) | C14—C13—C12 | 117.8 (5) |
N1—Zn1—N11i | 105.9 (2) | C14—C13—C16 | 120.9 (5) |
N1i—Zn1—N11 | 105.9 (2) | C12—C13—C16 | 121.3 (5) |
N1—Zn1—N11 | 106.8 (2) | C13—C14—C15 | 119.8 (6) |
N11i—Zn1—N11 | 113.3 (3) | C13—C14—H14 | 120.1 |
C1—N1—Zn1 | 176.5 (6) | C15—C14—H14 | 120.1 |
N1—C1—S1 | 177.8 (7) | N11—C15—C14 | 122.4 (6) |
C15—N11—C11 | 117.9 (5) | N11—C15—H15 | 118.8 |
C15—N11—Zn1 | 119.9 (4) | C14—C15—H15 | 118.8 |
C11—N11—Zn1 | 122.1 (4) | N12—C16—C13 | 113.2 (6) |
N11—C11—C12 | 122.5 (5) | N12—C16—S11 | 123.7 (5) |
N11—C11—H11 | 118.8 | C13—C16—S11 | 123.0 (5) |
C12—C11—H11 | 118.8 | C16—N12—H1N | 125.8 |
C11—C12—C13 | 119.6 (5) | C16—N12—H2N | 122.6 |
C11—C12—H12 | 120.2 | H1N—N12—H2N | 111.3 |
Symmetry code: (i) −x+3/2, −y+1/2, z. |
D—H···A | D—H | H···A | D···A | D—H···A |
C15—H15···S1ii | 0.95 | 2.96 | 3.690 (6) | 135 |
N12—H1N···S11iii | 1.01 | 2.41 | 3.358 (5) | 156 |
N12—H2N···S1iv | 1.03 | 2.41 | 3.424 (6) | 166 |
Symmetry codes: (ii) −x+3/2, −y+1/2, z+1; (iii) x−1/4, −y+1/4, z−1/4; (iv) x−1/2, y, z+1/2. |
Acknowledgements
We thank Professor Dr. Wolfgang Bensch for access to his experimental facilities.
Funding information
This project was supported by the Deutsche Forschungsgemeinschaft (Project No. NA 720/5–2) and the State of Schleswig-Holstein.
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