research communications
β-cinnamoyl-7β-hydroxyvouacapen-5α-ol
and Hirshfeld surface analysis of the naturally occurring cassane-type diterpenoid, 6aDepartment of Chemistry, Faculty of Physical Sciences, University of Benin, Benin City, Nigeria, bH. E. J. Research Institute of Chemistry, International Center for Chemical and Biological Sciences, University of Karachi, Karachi-75270, Pakistan, cDepartment of Chemistry, School of Sciences, The Federal University of Technology, Akure, Nigeria, and dDepartment of Pharmaceutical Chemistry, Faculty of Pharmacy, University of Benin, Benin City, Nigeria
*Correspondence e-mail: dr.sammer.yousuf@gmail.com
The title compound, C29H36O5, a cassane-type diterpenoid {systematic name: (4aR,5R,6R,6aS,7R,11aS,11bR)-4a,6-dihydroxy-4,4,7,11b-tetramethyl-1,2,3,4,4a,5,6,6a,7,11,11a,11b-dodecahydrophenanthro[3,2-b]furan-5-yl 3-phenylprop-2-enoate}, was isolated from a medicinally important plant, Caesalpinia pulcherrima (Fabaceae). In the molecule, three cyclohexane rings are trans-fused and adopt chair, chair and half-chair conformations. In the crystal, molecules are linked via O—H⋯O hydrogen bonds, forming a tape structure along the b-axis direction. The tapes are further linked into a double-tape structure through C—H⋯π interactions. The Hirshfeld surface analysis indicates that the contributions to the crystal packing are H⋯H (65.5%), C⋯H (18.7%), O⋯H (14.5%) and C⋯O (0.3%).
Keywords: crystal structure; Caesalpinia pulcherrima; cassane-type diterpenoids; Hirshfeld surface analysis; electrostatic potential.
CCDC reference: 1823530
1. Chemical context
Caesalpinia pulcherrima (Fabaceae) is a decorative evergreen plant widely used for the treatment of various illnesses (Roach et al., 2003). It is commonly known as Gulmohor, Krishnachura and Mayirkonnai, respectively, in Hindi, Bengali and Tamil. Herbalists in the Amazon tropical rain forest have long known some of the medicinal uses of C. pulcherrima, known locally as ayoowiri (Patel et al., 2010). The plant is also known to be used for the treatment of inflammation, earache, muscular and sore pain and cardiovascular disorders and as an antimalarial, vermifuge and antipyretic agent (Patel et al., 2010; Roach et al., 2003). The natural constituents commonly known as cassane-type extracted from C. pulcherrima have been reported by Pranithanchai et al. (2009) and Rao et al. (2005). Cassane-type represent a class of pharmaceutically important natural products having various biological activities. The current study deals with the isolation, single-crystal X-ray diffraction and Hirshfeld surface analysis of the title compound, a naturally occurring cassane-type diterpenoid.
2. Structural commentary
The title compound is composed of three trans-fused cyclohexane rings, A (C1–C5/C10), B (C5–C10) and C (C8/C9/C11–C14), having chair, chair and half-chair conformations, respectively; the puckering parameters are Q = 0.561 (3) Å, θ = 0.0 (3)° and φ = 300 (132)° for ring A, Q = 0.555 (2) Å, θ = 4.4 (2)° and φ = 319 (4)° for ring B, and Q = 0.456 (2) Å, θ = 45.9 (3)° and φ = 17.7 (4)° for ring C (Fig. 1). The fused rings have trans-oriented hydroxyl and methyl groups attached at atoms C5 and C10, respectively, along the junction of rings A and B, with an O1—C5—C10—C19 torsion angle of −174.41 (18)°. The furan (O2/C12/C13/C15/C16) ring is essentially planar with the C12=C13 and C15=C16 double bonds having the same length (1.343 Å). The dihedral angle between the furan ring and the phenyl C24–C29 ring of the cinnamoyl moiety is 82.14 (13)°. The absolute configurations of the stereogenic centers at positions 5, 6, 7, 8, 9, 10 and 14 are established as R, R, R, S, S, R and R, respectively, on the basis of the reported structure by Fun et al. (2010). In the molecule, an intramolecular C—H⋯O interaction (C17—H17C⋯O3; Table 1) forms an S(6) ring motif.
3. Supramolecular features
In the crystal, the molecules are linked via O—H⋯O hydrogen bonds (O5—H5⋯O2i; symmetry code as in Table 1), forming chains along the b-axis direction (Fig. 2). The chains are further linked into a double-chain structure through C—H⋯π interactions (C3—H3A⋯Cg1ii; symmetry code as in Table 1) involving the furan ring.
4. Hydrogen bonding and Hirshfeld surface analysis
The Hishfeld surface mapped over dnorm (McKinnon et al., 2004; Spackman & Jayatilaka, 2009) for the title compound is depicted in Fig. 3. The red areas on the surface indicate short contacts as compared to the sum of the Van der Waals (vdW) radii, while the blue indicate long contacts and white area indicate contacts with distances equal to the sum of the vdW radii. The red highlighted area shows the O—H⋯O hydrogen bond, which is responsible for connecting molecules to each other. The contribution of the H⋯H contacts to the crystal packing is 65.5%, and C⋯H, O⋯H and C⋯O contributions are 18.7, 14.5 and 0.3%, respectively. The Hirshfeld surface mapped over electrostatic potential (Spackman et al., 2008) is shown in Fig. 4. The red region indicates atoms having potential to be hydrogen-bond acceptors with negative electrostatic potential, while the blue shows potential to be hydrogen-bond donors with positive electrostatic potential. Fig. 5 shows the Hishfeld surface mapped over shape-index and two-dimensional fingerprint plots are given in Fig. 6.
5. Database survey
A search of the Cambridge Structural Database (Version 5.38; Groom et al., 2016) for a common fragment composed of three trans-fused six-membered rings and one planar furan ring shows 12 hits: Refcodes CSLPIN10 (Birnbaum et al., 1969), DUTJIM, DUVCON (Fun et al., 2010), EGAYIU, EGAYUG, EGAZAN, and EGAZER (Jiang et al., 2002), MEYREN, MEYRIR, MEYROX and MEYRUD (Jiang et al., 2001), and POPNIR (Kitagawa et al., 1994). All of the hits are of the same class of compounds as the title compound, i.e. cassane-type with different substitution patterns on the fused rings.
6. Isolation and crystallization
The powdered stem bark (2.5 kg) of C. pulcherrima was extracted with methanol (7.5 l) by cold maceration for four days, followed by filteration and concentration using a rotary evaporator under reduced pressure at 228 K to obtain the crude plant extract (200 g). The crude extract was further fractionated by silica gel first using n-hexane (9.4 l) and then with increasing polarities of solvents [n-hexane:ethylacetate (1:1) (12.5 l), ethyl acetate (8.2 l), ethyl acetate:methanol (1:1) (13 l) and finally with methanol (7 l)]. Concentration of fractions in vacuo gave five major fractions of 0.45, 38.81, 25.75, 127.73 and 4.18 g after elution from n-hexane, n-hexane:ethyl acetate (1:1), ethyl acetate, ethyl acetate:methanol (1:1) and methanol, respectively. The dried n-hexane:ethylacetate (1:1) fraction was re-chromatographed by over silica gel using increasing proportions of ethyl acetate in n-hexane (starting from 100% n-hexane) as eluents to afford twelve sub-fractions. One sub-fraction, CP93-123 (6 g), obtained after elution from n-hexane:ethyl acetate (9:1), was re-fractionated on silica gel with n-hexane:ethyl acetate (100:0 to 80:20) to give three sub fractions (CP93-123-A, -B and -C). The sub fraction CP93-123A was suspended in n-hexane:ethyl acetate (97:3). A white crystalline product was obtained, which was filtered and dried to give the title compound (yield 74 mg, 3.7 × 10−4%). Single crystals of the title compound were obtained by slow evaporation of an ethanol solution at 296 K.
7. Data collection and Refinement
Crystal data, . All H atoms were placed geometrically (C—H = 0.95–1.00 Å and O—H = 0.84 Å) and were refined as riding with Uiso(H) = 1.2Ueq(C) or 1.5Ueq(O). Since a partial racemic twin of the crystal was suggested from a of 0.17 (7) (Parsons et al., 2013), a twin treatment was adopted in the final The BASF parameter refined to 0.0 (2). It is, therefore, uncertain whether the crystal used was an or not.
results are summarized in Table 2Supporting information
CCDC reference: 1823530
https://doi.org/10.1107/S2056989018002499/is5486sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S2056989018002499/is5486Isup2.hkl
Supporting information file. DOI: https://doi.org/10.1107/S2056989018002499/is5486Isup3.cml
Data collection: APEX2 (Bruker, 2000); cell
SAINT (Bruker, 2000); data reduction: SAINT (Bruker, 2000); program(s) used to solve structure: SHELXT2014 (Sheldrick, 2015a); program(s) used to refine structure: SHELXL2016 (Sheldrick, 2015b); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012) and SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).C29H36O5 | F(000) = 500 |
Mr = 464.58 | Dx = 1.253 Mg m−3 |
Monoclinic, P21 | Cu Kα radiation, λ = 1.54178 Å |
a = 12.1129 (3) Å | Cell parameters from 9975 reflections |
b = 7.8973 (2) Å | θ = 3.4–68.3° |
c = 12.9253 (3) Å | µ = 0.67 mm−1 |
β = 94.930 (1)° | T = 100 K |
V = 1231.85 (5) Å3 | Plate, colourless |
Z = 2 | 0.17 × 0.13 × 0.06 mm |
Bruker APEXII CCD diffractometer | Rint = 0.049 |
φ and ω scans | θmax = 68.3°, θmin = 3.4° |
21754 measured reflections | h = −14→14 |
4526 independent reflections | k = −9→9 |
4183 reflections with I > 2σ(I) | l = −15→15 |
Refinement on F2 | Hydrogen site location: inferred from neighbouring sites |
Least-squares matrix: full | H-atom parameters constrained |
R[F2 > 2σ(F2)] = 0.035 | w = 1/[σ2(Fo2) + (0.0501P)2 + 0.2131P] where P = (Fo2 + 2Fc2)/3 |
wR(F2) = 0.085 | (Δ/σ)max < 0.001 |
S = 1.00 | Δρmax = 0.19 e Å−3 |
4526 reflections | Δρmin = −0.21 e Å−3 |
314 parameters | Absolute structure: Refined as an inversion twin |
1 restraint | Absolute structure parameter: 0.0 (2) |
Experimental. 1H-NMR (400 MHz C3D6O): 7.71(m), 7.62(m), 7.41(m), 7.41(m), 7.29(d, J = 1.6 Hz), 6.58(d, J = 16 Hz), 6.23(d,J = 1.6Hz), 5.65(d, J = 4Hz), 4.28(m), 3.04(q, J = 12,6.4 Hz), 2.48(m), 2.48(m), 1.97(m), 1.86(T, J = 12.8), 1.02(m), 1.72(m), 1.41(m), 1.65(m), 1.40(m), 1.46(s), 1.19(s), 1.10(m), 1.04(d, J = 7.2). 13C-NMR (300 MHz C3D6O): 166.9, 150.23, 145.11, 141.3, 135.5, 131.1, 129.8,129.0, 120.1, 122.9, 110.5, 78.04, 74.50, 68.93, 41.88, 39.97, 39.10, 38.43, 38.02, 35.52, 28.25, 28.18, 25.81, 22.44, 19.04, 17.77, 17.45. IR: (cm-1) 3592.0, 3058.8, 2934.9, 2866.8, 1713.9, 1639.7, 1577.8, 1503.1, 1456.6, 1391.8, 1310.3, 1280.8, 1168.4, 1058.3, 1008.2, 979.7, 909.7 863.8, 765.9, 723.1, 687.4. |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refined as a 2-component inversion twin. |
x | y | z | Uiso*/Ueq | ||
O1 | 0.51780 (13) | 0.1960 (2) | 0.12545 (11) | 0.0191 (4) | |
H1 | 0.583625 | 0.166840 | 0.119366 | 0.029* | |
O2 | 0.22809 (14) | −0.4687 (2) | −0.01284 (13) | 0.0223 (4) | |
O3 | 0.31947 (13) | 0.1907 (2) | 0.31852 (11) | 0.0176 (3) | |
O4 | 0.28626 (16) | 0.4678 (2) | 0.34903 (15) | 0.0300 (4) | |
O5 | 0.19074 (13) | 0.2782 (2) | 0.14554 (12) | 0.0190 (4) | |
H5 | 0.187516 | 0.371232 | 0.113926 | 0.029* | |
C1 | 0.5738 (2) | −0.1463 (3) | 0.19336 (19) | 0.0223 (5) | |
H1A | 0.563465 | −0.270610 | 0.191241 | 0.027* | |
H1B | 0.596970 | −0.110358 | 0.125098 | 0.027* | |
C2 | 0.6658 (2) | −0.1033 (4) | 0.2771 (2) | 0.0281 (6) | |
H2A | 0.646674 | −0.150083 | 0.344371 | 0.034* | |
H2B | 0.735565 | −0.157536 | 0.259730 | 0.034* | |
C3 | 0.6840 (2) | 0.0864 (4) | 0.2882 (2) | 0.0266 (6) | |
H3A | 0.711327 | 0.130558 | 0.223380 | 0.032* | |
H3B | 0.742076 | 0.107536 | 0.345374 | 0.032* | |
C4 | 0.57779 (19) | 0.1850 (3) | 0.31052 (18) | 0.0203 (5) | |
C5 | 0.48332 (19) | 0.1330 (3) | 0.22378 (17) | 0.0159 (5) | |
C6 | 0.37500 (19) | 0.2335 (3) | 0.22738 (17) | 0.0157 (5) | |
H6 | 0.392800 | 0.357187 | 0.229305 | 0.019* | |
C7 | 0.29530 (18) | 0.1976 (3) | 0.13233 (16) | 0.0150 (5) | |
H7 | 0.326559 | 0.247100 | 0.069884 | 0.018* | |
C8 | 0.27205 (19) | 0.0105 (3) | 0.11248 (17) | 0.0144 (5) | |
H8 | 0.232224 | −0.032713 | 0.171772 | 0.017* | |
C9 | 0.38119 (18) | −0.0920 (3) | 0.11139 (16) | 0.0141 (5) | |
H9 | 0.419571 | −0.052008 | 0.050411 | 0.017* | |
C10 | 0.46211 (19) | −0.0615 (3) | 0.21063 (17) | 0.0162 (5) | |
C11 | 0.35761 (19) | −0.2846 (3) | 0.09546 (18) | 0.0195 (5) | |
H11A | 0.421988 | −0.339792 | 0.067248 | 0.023* | |
H11B | 0.346108 | −0.337965 | 0.163002 | 0.023* | |
C12 | 0.25746 (19) | −0.3084 (3) | 0.02252 (17) | 0.0174 (5) | |
C13 | 0.1808 (2) | −0.1948 (3) | −0.01287 (18) | 0.0169 (5) | |
C14 | 0.19243 (19) | −0.0105 (3) | 0.01221 (18) | 0.0170 (5) | |
H14 | 0.117939 | 0.033202 | 0.027082 | 0.020* | |
C15 | 0.09710 (19) | −0.2868 (3) | −0.07485 (19) | 0.0214 (5) | |
H15 | 0.031927 | −0.241267 | −0.110517 | 0.026* | |
C16 | 0.1288 (2) | −0.4498 (3) | −0.0727 (2) | 0.0240 (5) | |
H16 | 0.088574 | −0.539445 | −0.107408 | 0.029* | |
C17 | 0.5565 (2) | 0.1516 (3) | 0.42506 (18) | 0.0252 (6) | |
H17A | 0.612996 | 0.209595 | 0.470912 | 0.038* | |
H17B | 0.559908 | 0.029565 | 0.438823 | 0.038* | |
H17C | 0.482962 | 0.194371 | 0.438008 | 0.038* | |
C18 | 0.6012 (2) | 0.3760 (3) | 0.3034 (2) | 0.0274 (6) | |
H18A | 0.540690 | 0.439604 | 0.330854 | 0.041* | |
H18B | 0.606793 | 0.407338 | 0.230669 | 0.041* | |
H18C | 0.671040 | 0.402637 | 0.344118 | 0.041* | |
C19 | 0.4136 (2) | −0.1444 (3) | 0.30596 (17) | 0.0194 (5) | |
H19A | 0.444707 | −0.088795 | 0.369703 | 0.029* | |
H19B | 0.432678 | −0.265020 | 0.308648 | 0.029* | |
H19C | 0.332817 | −0.131699 | 0.299626 | 0.029* | |
C20 | 0.2289 (2) | 0.0857 (3) | −0.08241 (18) | 0.0218 (5) | |
H20A | 0.225048 | 0.207822 | −0.069787 | 0.033* | |
H20B | 0.179661 | 0.056395 | −0.143969 | 0.033* | |
H20C | 0.305132 | 0.054200 | −0.093813 | 0.033* | |
C21 | 0.2732 (2) | 0.3200 (3) | 0.36808 (18) | 0.0204 (5) | |
C22 | 0.2066 (2) | 0.2519 (4) | 0.44928 (18) | 0.0221 (6) | |
H22 | 0.205628 | 0.133757 | 0.462953 | 0.026* | |
C23 | 0.1479 (2) | 0.3580 (4) | 0.50308 (18) | 0.0235 (6) | |
H23 | 0.153196 | 0.474847 | 0.486769 | 0.028* | |
C24 | 0.0756 (2) | 0.3140 (4) | 0.58504 (19) | 0.0242 (6) | |
C25 | 0.0608 (2) | 0.1487 (4) | 0.61904 (19) | 0.0283 (6) | |
H25 | 0.098725 | 0.058097 | 0.589145 | 0.034* | |
C26 | −0.0092 (2) | 0.1158 (4) | 0.6966 (2) | 0.0329 (7) | |
H26 | −0.019633 | 0.002787 | 0.719015 | 0.039* | |
C27 | −0.0638 (2) | 0.2486 (5) | 0.7412 (2) | 0.0361 (8) | |
H27 | −0.111276 | 0.226126 | 0.794396 | 0.043* | |
C28 | −0.0492 (2) | 0.4132 (4) | 0.7086 (2) | 0.0335 (7) | |
H28 | −0.086528 | 0.503687 | 0.739264 | 0.040* | |
C29 | 0.0199 (2) | 0.4457 (4) | 0.6310 (2) | 0.0290 (6) | |
H29 | 0.029684 | 0.558944 | 0.608671 | 0.035* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.0156 (8) | 0.0276 (9) | 0.0152 (8) | 0.0023 (7) | 0.0070 (6) | 0.0042 (7) |
O2 | 0.0289 (9) | 0.0153 (9) | 0.0219 (9) | 0.0013 (7) | −0.0027 (7) | 0.0011 (7) |
O3 | 0.0202 (8) | 0.0201 (8) | 0.0138 (7) | 0.0030 (7) | 0.0085 (6) | 0.0012 (7) |
O4 | 0.0332 (11) | 0.0233 (10) | 0.0361 (10) | −0.0011 (8) | 0.0176 (9) | −0.0085 (8) |
O5 | 0.0184 (9) | 0.0168 (8) | 0.0224 (8) | 0.0066 (7) | 0.0055 (7) | 0.0035 (7) |
C1 | 0.0210 (13) | 0.0254 (13) | 0.0201 (12) | 0.0091 (10) | −0.0012 (10) | −0.0019 (10) |
C2 | 0.0227 (13) | 0.0350 (15) | 0.0256 (13) | 0.0130 (12) | −0.0047 (11) | −0.0087 (12) |
C3 | 0.0183 (12) | 0.0369 (16) | 0.0238 (13) | 0.0043 (11) | −0.0027 (10) | −0.0051 (11) |
C4 | 0.0183 (11) | 0.0245 (13) | 0.0179 (11) | 0.0006 (11) | 0.0010 (9) | −0.0016 (11) |
C5 | 0.0167 (11) | 0.0210 (12) | 0.0107 (10) | 0.0020 (9) | 0.0054 (9) | 0.0020 (9) |
C6 | 0.0185 (11) | 0.0159 (12) | 0.0137 (10) | −0.0002 (9) | 0.0078 (9) | 0.0026 (9) |
C7 | 0.0151 (11) | 0.0157 (11) | 0.0149 (10) | 0.0051 (10) | 0.0060 (9) | 0.0032 (10) |
C8 | 0.0152 (11) | 0.0164 (12) | 0.0122 (10) | 0.0021 (9) | 0.0046 (9) | 0.0040 (9) |
C9 | 0.0161 (11) | 0.0156 (11) | 0.0111 (10) | 0.0038 (9) | 0.0039 (8) | 0.0015 (9) |
C10 | 0.0189 (12) | 0.0168 (12) | 0.0131 (10) | 0.0042 (9) | 0.0022 (9) | 0.0004 (9) |
C11 | 0.0240 (12) | 0.0191 (12) | 0.0151 (10) | 0.0053 (11) | −0.0004 (9) | 0.0017 (10) |
C12 | 0.0228 (12) | 0.0160 (11) | 0.0141 (10) | 0.0004 (10) | 0.0049 (9) | 0.0014 (10) |
C13 | 0.0164 (11) | 0.0187 (12) | 0.0162 (11) | −0.0003 (9) | 0.0054 (9) | 0.0029 (9) |
C14 | 0.0138 (11) | 0.0172 (12) | 0.0201 (11) | 0.0034 (9) | 0.0027 (9) | 0.0017 (9) |
C15 | 0.0161 (11) | 0.0239 (13) | 0.0241 (12) | −0.0018 (10) | 0.0007 (9) | 0.0031 (11) |
C16 | 0.0242 (13) | 0.0218 (13) | 0.0254 (13) | −0.0047 (11) | −0.0021 (10) | 0.0014 (11) |
C17 | 0.0281 (14) | 0.0306 (15) | 0.0165 (11) | 0.0030 (11) | −0.0007 (10) | −0.0044 (10) |
C18 | 0.0245 (13) | 0.0267 (15) | 0.0307 (14) | −0.0021 (11) | 0.0010 (11) | −0.0034 (11) |
C19 | 0.0291 (13) | 0.0169 (12) | 0.0121 (10) | 0.0043 (10) | 0.0014 (10) | 0.0024 (9) |
C20 | 0.0290 (13) | 0.0179 (12) | 0.0175 (12) | −0.0022 (11) | −0.0043 (10) | 0.0042 (9) |
C21 | 0.0181 (12) | 0.0257 (14) | 0.0178 (12) | 0.0002 (10) | 0.0038 (10) | −0.0049 (10) |
C22 | 0.0197 (12) | 0.0314 (15) | 0.0154 (11) | 0.0009 (10) | 0.0030 (10) | −0.0026 (10) |
C23 | 0.0179 (12) | 0.0354 (15) | 0.0172 (12) | −0.0010 (11) | 0.0014 (10) | −0.0058 (11) |
C24 | 0.0134 (12) | 0.0434 (17) | 0.0157 (11) | −0.0003 (11) | 0.0001 (10) | −0.0073 (11) |
C25 | 0.0214 (13) | 0.0448 (18) | 0.0186 (12) | 0.0038 (11) | 0.0012 (10) | −0.0045 (12) |
C26 | 0.0265 (14) | 0.0487 (18) | 0.0235 (13) | −0.0032 (13) | 0.0030 (11) | 0.0043 (13) |
C27 | 0.0252 (14) | 0.064 (2) | 0.0198 (13) | 0.0011 (14) | 0.0094 (11) | −0.0011 (13) |
C28 | 0.0213 (13) | 0.054 (2) | 0.0265 (14) | 0.0029 (13) | 0.0071 (11) | −0.0092 (14) |
C29 | 0.0194 (13) | 0.0432 (18) | 0.0247 (13) | 0.0005 (12) | 0.0045 (11) | −0.0060 (13) |
O1—C5 | 1.459 (3) | C11—H11B | 0.9900 |
O1—H1 | 0.8400 | C12—C13 | 1.343 (3) |
O2—C16 | 1.381 (3) | C13—C15 | 1.435 (3) |
O2—C12 | 1.383 (3) | C13—C14 | 1.495 (3) |
O3—C21 | 1.352 (3) | C14—C20 | 1.536 (3) |
O3—C6 | 1.446 (3) | C14—H14 | 1.0000 |
O4—C21 | 1.206 (3) | C15—C16 | 1.343 (4) |
O5—C7 | 1.441 (3) | C15—H15 | 0.9500 |
O5—H5 | 0.8400 | C16—H16 | 0.9500 |
C1—C2 | 1.524 (3) | C17—H17A | 0.9800 |
C1—C10 | 1.543 (3) | C17—H17B | 0.9800 |
C1—H1A | 0.9900 | C17—H17C | 0.9800 |
C1—H1B | 0.9900 | C18—H18A | 0.9800 |
C2—C3 | 1.520 (4) | C18—H18B | 0.9800 |
C2—H2A | 0.9900 | C18—H18C | 0.9800 |
C2—H2B | 0.9900 | C19—H19A | 0.9800 |
C3—C4 | 1.552 (3) | C19—H19B | 0.9800 |
C3—H3A | 0.9900 | C19—H19C | 0.9800 |
C3—H3B | 0.9900 | C20—H20A | 0.9800 |
C4—C18 | 1.539 (4) | C20—H20B | 0.9800 |
C4—C17 | 1.547 (3) | C20—H20C | 0.9800 |
C4—C5 | 1.586 (3) | C21—C22 | 1.479 (3) |
C5—C6 | 1.538 (3) | C22—C23 | 1.333 (3) |
C5—C10 | 1.564 (3) | C22—H22 | 0.9500 |
C6—C7 | 1.522 (3) | C23—C24 | 1.472 (3) |
C6—H6 | 1.0000 | C23—H23 | 0.9500 |
C7—C8 | 1.522 (3) | C24—C25 | 1.394 (4) |
C7—H7 | 1.0000 | C24—C29 | 1.400 (4) |
C8—C9 | 1.551 (3) | C25—C26 | 1.392 (4) |
C8—C14 | 1.556 (3) | C25—H25 | 0.9500 |
C8—H8 | 1.0000 | C26—C27 | 1.392 (4) |
C9—C11 | 1.558 (3) | C26—H26 | 0.9500 |
C9—C10 | 1.565 (3) | C27—C28 | 1.383 (5) |
C9—H9 | 1.0000 | C27—H27 | 0.9500 |
C10—C19 | 1.555 (3) | C28—C29 | 1.385 (4) |
C11—C12 | 1.483 (3) | C28—H28 | 0.9500 |
C11—H11A | 0.9900 | C29—H29 | 0.9500 |
C5—O1—H1 | 109.5 | C13—C12—O2 | 110.4 (2) |
C16—O2—C12 | 105.83 (18) | C13—C12—C11 | 129.5 (2) |
C21—O3—C6 | 116.78 (18) | O2—C12—C11 | 120.0 (2) |
C7—O5—H5 | 109.5 | C12—C13—C15 | 106.7 (2) |
C2—C1—C10 | 113.4 (2) | C12—C13—C14 | 121.8 (2) |
C2—C1—H1A | 108.9 | C15—C13—C14 | 131.5 (2) |
C10—C1—H1A | 108.9 | C13—C14—C20 | 109.7 (2) |
C2—C1—H1B | 108.9 | C13—C14—C8 | 108.94 (19) |
C10—C1—H1B | 108.9 | C20—C14—C8 | 114.22 (19) |
H1A—C1—H1B | 107.7 | C13—C14—H14 | 107.9 |
C3—C2—C1 | 112.2 (2) | C20—C14—H14 | 107.9 |
C3—C2—H2A | 109.2 | C8—C14—H14 | 107.9 |
C1—C2—H2A | 109.2 | C16—C15—C13 | 106.7 (2) |
C3—C2—H2B | 109.2 | C16—C15—H15 | 126.7 |
C1—C2—H2B | 109.2 | C13—C15—H15 | 126.7 |
H2A—C2—H2B | 107.9 | C15—C16—O2 | 110.4 (2) |
C2—C3—C4 | 113.4 (2) | C15—C16—H16 | 124.8 |
C2—C3—H3A | 108.9 | O2—C16—H16 | 124.8 |
C4—C3—H3A | 108.9 | C4—C17—H17A | 109.5 |
C2—C3—H3B | 108.9 | C4—C17—H17B | 109.5 |
C4—C3—H3B | 108.9 | H17A—C17—H17B | 109.5 |
H3A—C3—H3B | 107.7 | C4—C17—H17C | 109.5 |
C18—C4—C17 | 105.7 (2) | H17A—C17—H17C | 109.5 |
C18—C4—C3 | 108.7 (2) | H17B—C17—H17C | 109.5 |
C17—C4—C3 | 107.6 (2) | C4—C18—H18A | 109.5 |
C18—C4—C5 | 109.7 (2) | C4—C18—H18B | 109.5 |
C17—C4—C5 | 117.6 (2) | H18A—C18—H18B | 109.5 |
C3—C4—C5 | 107.32 (19) | C4—C18—H18C | 109.5 |
O1—C5—C6 | 99.16 (17) | H18A—C18—H18C | 109.5 |
O1—C5—C10 | 107.26 (18) | H18B—C18—H18C | 109.5 |
C6—C5—C10 | 112.19 (19) | C10—C19—H19A | 109.5 |
O1—C5—C4 | 106.52 (18) | C10—C19—H19B | 109.5 |
C6—C5—C4 | 114.24 (19) | H19A—C19—H19B | 109.5 |
C10—C5—C4 | 115.66 (18) | C10—C19—H19C | 109.5 |
O3—C6—C7 | 107.87 (17) | H19A—C19—H19C | 109.5 |
O3—C6—C5 | 111.22 (17) | H19B—C19—H19C | 109.5 |
C7—C6—C5 | 111.28 (18) | C14—C20—H20A | 109.5 |
O3—C6—H6 | 108.8 | C14—C20—H20B | 109.5 |
C7—C6—H6 | 108.8 | H20A—C20—H20B | 109.5 |
C5—C6—H6 | 108.8 | C14—C20—H20C | 109.5 |
O5—C7—C8 | 107.28 (18) | H20A—C20—H20C | 109.5 |
O5—C7—C6 | 108.97 (18) | H20B—C20—H20C | 109.5 |
C8—C7—C6 | 114.34 (19) | O4—C21—O3 | 124.5 (2) |
O5—C7—H7 | 108.7 | O4—C21—C22 | 125.8 (2) |
C8—C7—H7 | 108.7 | O3—C21—C22 | 109.6 (2) |
C6—C7—H7 | 108.7 | C23—C22—C21 | 119.4 (2) |
C7—C8—C9 | 111.26 (18) | C23—C22—H22 | 120.3 |
C7—C8—C14 | 109.65 (18) | C21—C22—H22 | 120.3 |
C9—C8—C14 | 113.85 (17) | C22—C23—C24 | 127.1 (3) |
C7—C8—H8 | 107.3 | C22—C23—H23 | 116.4 |
C9—C8—H8 | 107.3 | C24—C23—H23 | 116.4 |
C14—C8—H8 | 107.3 | C25—C24—C29 | 118.9 (2) |
C8—C9—C11 | 111.34 (18) | C25—C24—C23 | 123.3 (2) |
C8—C9—C10 | 112.74 (17) | C29—C24—C23 | 117.9 (3) |
C11—C9—C10 | 110.70 (18) | C26—C25—C24 | 120.3 (3) |
C8—C9—H9 | 107.3 | C26—C25—H25 | 119.8 |
C11—C9—H9 | 107.3 | C24—C25—H25 | 119.8 |
C10—C9—H9 | 107.3 | C27—C26—C25 | 119.9 (3) |
C1—C10—C19 | 109.14 (19) | C27—C26—H26 | 120.1 |
C1—C10—C5 | 107.69 (19) | C25—C26—H26 | 120.1 |
C19—C10—C5 | 113.40 (18) | C28—C27—C26 | 120.3 (3) |
C1—C10—C9 | 108.06 (17) | C28—C27—H27 | 119.9 |
C19—C10—C9 | 109.40 (18) | C26—C27—H27 | 119.9 |
C5—C10—C9 | 109.01 (18) | C27—C28—C29 | 119.8 (3) |
C12—C11—C9 | 109.77 (19) | C27—C28—H28 | 120.1 |
C12—C11—H11A | 109.7 | C29—C28—H28 | 120.1 |
C9—C11—H11A | 109.7 | C28—C29—C24 | 120.9 (3) |
C12—C11—H11B | 109.7 | C28—C29—H29 | 119.6 |
C9—C11—H11B | 109.7 | C24—C29—H29 | 119.6 |
H11A—C11—H11B | 108.2 | ||
C10—C1—C2—C3 | −56.4 (3) | C4—C5—C10—C9 | −170.95 (17) |
C1—C2—C3—C4 | 56.2 (3) | C8—C9—C10—C1 | −171.20 (19) |
C2—C3—C4—C18 | −171.4 (2) | C11—C9—C10—C1 | 63.3 (2) |
C2—C3—C4—C17 | 74.6 (3) | C8—C9—C10—C19 | 70.1 (2) |
C2—C3—C4—C5 | −52.8 (3) | C11—C9—C10—C19 | −55.4 (2) |
C18—C4—C5—O1 | 52.4 (2) | C8—C9—C10—C5 | −54.4 (2) |
C17—C4—C5—O1 | 173.2 (2) | C11—C9—C10—C5 | −179.89 (18) |
C3—C4—C5—O1 | −65.5 (2) | C8—C9—C11—C12 | 36.7 (2) |
C18—C4—C5—C6 | −56.0 (2) | C10—C9—C11—C12 | 162.98 (17) |
C17—C4—C5—C6 | 64.8 (3) | C16—O2—C12—C13 | 0.1 (2) |
C3—C4—C5—C6 | −173.9 (2) | C16—O2—C12—C11 | 176.0 (2) |
C18—C4—C5—C10 | 171.51 (19) | C9—C11—C12—C13 | −12.6 (3) |
C17—C4—C5—C10 | −67.7 (3) | C9—C11—C12—O2 | 172.36 (19) |
C3—C4—C5—C10 | 53.6 (3) | O2—C12—C13—C15 | −0.1 (3) |
C21—O3—C6—C7 | −98.4 (2) | C11—C12—C13—C15 | −175.5 (2) |
C21—O3—C6—C5 | 139.3 (2) | O2—C12—C13—C14 | −179.1 (2) |
O1—C5—C6—O3 | 178.25 (17) | C11—C12—C13—C14 | 5.5 (4) |
C10—C5—C6—O3 | 65.3 (2) | C12—C13—C14—C20 | 103.5 (2) |
C4—C5—C6—O3 | −68.9 (2) | C15—C13—C14—C20 | −75.2 (3) |
O1—C5—C6—C7 | 58.0 (2) | C12—C13—C14—C8 | −22.2 (3) |
C10—C5—C6—C7 | −55.0 (2) | C15—C13—C14—C8 | 159.1 (2) |
C4—C5—C6—C7 | 170.81 (19) | C7—C8—C14—C13 | 173.58 (18) |
O3—C6—C7—O5 | 50.8 (2) | C9—C8—C14—C13 | 48.2 (2) |
C5—C6—C7—O5 | 173.09 (18) | C7—C8—C14—C20 | 50.6 (2) |
O3—C6—C7—C8 | −69.2 (2) | C9—C8—C14—C20 | −74.8 (3) |
C5—C6—C7—C8 | 53.1 (2) | C12—C13—C15—C16 | 0.0 (3) |
O5—C7—C8—C9 | −172.61 (16) | C14—C13—C15—C16 | 178.9 (2) |
C6—C7—C8—C9 | −51.7 (2) | C13—C15—C16—O2 | 0.0 (3) |
O5—C7—C8—C14 | 60.5 (2) | C12—O2—C16—C15 | −0.1 (3) |
C6—C7—C8—C14 | −178.51 (17) | C6—O3—C21—O4 | −9.1 (3) |
C7—C8—C9—C11 | 177.74 (18) | C6—O3—C21—C22 | 171.78 (18) |
C14—C8—C9—C11 | −57.7 (2) | O4—C21—C22—C23 | 5.2 (4) |
C7—C8—C9—C10 | 52.6 (2) | O3—C21—C22—C23 | −175.7 (2) |
C14—C8—C9—C10 | 177.15 (19) | C21—C22—C23—C24 | 178.9 (2) |
C2—C1—C10—C19 | −70.0 (3) | C22—C23—C24—C25 | 1.2 (4) |
C2—C1—C10—C5 | 53.5 (3) | C22—C23—C24—C29 | −179.2 (2) |
C2—C1—C10—C9 | 171.1 (2) | C29—C24—C25—C26 | 0.7 (4) |
O1—C5—C10—C1 | 64.7 (2) | C23—C24—C25—C26 | −179.7 (2) |
C6—C5—C10—C1 | 172.59 (17) | C24—C25—C26—C27 | −0.7 (4) |
C4—C5—C10—C1 | −53.9 (2) | C25—C26—C27—C28 | 0.3 (4) |
O1—C5—C10—C19 | −174.41 (18) | C26—C27—C28—C29 | 0.1 (4) |
C6—C5—C10—C19 | −66.6 (2) | C27—C28—C29—C24 | −0.1 (4) |
C4—C5—C10—C19 | 66.9 (3) | C25—C24—C29—C28 | −0.3 (4) |
O1—C5—C10—C9 | −52.3 (2) | C23—C24—C29—C28 | −179.9 (2) |
C6—C5—C10—C9 | 55.6 (2) |
Cg1 is the centroid of the O2/C12–C16 furan ring. |
D—H···A | D—H | H···A | D···A | D—H···A |
O5—H5···O2i | 0.84 | 2.16 | 2.924 (2) | 151 |
C3—H3A···Cg1ii | 0.98 | 2.94 | 3.896 (3) | 163 |
C17—H17C···O3 | 0.98 | 2.40 | 3.091 (3) | 127 |
Symmetry codes: (i) x, y+1, z; (ii) −x+1, y+1/2, −z. |
Funding information
This research was supported by the University of Benin (URPC 2016 grant), The World Academy of Sciences (TWAS) and the International Center for Chemical and Biological Sciences (ICCBS), University of Karachi, Pakistan (ICCBS–TWAS Postgraduate Fellowship Award to KOO; FR No. 3240287190).
References
Birnbaum, K. B. & Ferguson, G. (1969). Acta Cryst. B25, 720–730. CSD CrossRef IUCr Journals Google Scholar
Bruker (2000). APEX2 and SAINT. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Farrugia, L. J. (2012). J. Appl. Cryst. 45, 849–854. Web of Science CrossRef CAS IUCr Journals Google Scholar
Fun, H.-K., Yodsaoue, O., Karalai, C. & Chantrapromma, S. (2010). Acta Cryst. E66, o2059–o2060. Web of Science CSD CrossRef IUCr Journals Google Scholar
Jiang, R. W., Ma, S. C., But, P. P. H. & Mak, T. C. (2001). J. Nat. Prod. 64, 1266–1272. CSD CrossRef CAS Google Scholar
Jiang, R. W., Ma, S. C., He, Z. D., Huang, X. S., But, P. P. H., Wang, H., Chan, S., Ooi, V. E., Xu, H. & Mak, T. C. W. (2002). Bioorg. Med. Chem. 10, 2161–2170. CSD CrossRef CAS Google Scholar
Kitagawa, I., Simanjuntak, P., Watano, T., Shibuya, H., Fujii, S., Yamagata, Y. & Kobayashi, M. (1994). Chem. Pharm. Bull. 42, 1798–1802. CSD CrossRef CAS Google Scholar
McKinnon, J. J., Spackman, M. A. & Mitchell, A. S. (2004). Acta Cryst. B60, 627–668. Web of Science CrossRef CAS IUCr Journals Google Scholar
Parsons, S., Flack, H. D. & Wagner, T. (2013). Acta Cryst. B69, 249–259. Web of Science CrossRef CAS IUCr Journals Google Scholar
Patel, S. S., Verma, N. K., Chatterjee, C. & Gauthaman, K. (2010). Int. J. Appl. Res. Nat. Prod, 3, 1–5. CAS Google Scholar
Pranithanchai, W., Karalai, C., Ponglimanont, C., Subhadhirasakul, S. & Chantrapromma, K. (2009). Phytochemistry, 70, 300–304. Web of Science CrossRef PubMed CAS Google Scholar
Rao, Y. K., Fang, S. H. & Tzeng, Y. M. (2005). J. Ethnopharmacol. 100, 249–253. CrossRef CAS Google Scholar
Roach, J. S., McLean, S., Reynolds, W. F. & Tinto, W. F. (2003). J. Nat. Prod. 66, 1378–1381. Web of Science CrossRef PubMed CAS Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Sheldrick, G. M. (2015a). Acta Cryst. A71, 3–8. Web of Science CrossRef IUCr Journals Google Scholar
Sheldrick, G. M. (2015b). Acta Cryst. C71, 3–8. Web of Science CrossRef IUCr Journals Google Scholar
Spackman, M. A. & Jayatilaka, D. (2009). CrystEngComm, 11, 19–32. Web of Science CrossRef CAS Google Scholar
Spackman, M. A., McKinnon, J. J. & Jayatilaka, D. (2008). CrystEngComm, 10, 377–388. CAS Google Scholar
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