research communications
2-[(4-Bromophenyl)sulfanyl]-2-methoxy-1-phenylethan-1-one:
Hirshfeld surface analysis and computational chemistryaDepartamento de Física, Universidade Federal de São Carlos, 13565-905 São Carlos, SP, Brazil, bDepartamento de Química, Universidade Federal de São Carlos, 13565-905 São Carlos, SP, Brazil, cInstituto de Química, Universidade de São Paulo, 05508-000 São Paulo, SP, Brazil, dDepartment of Physics, Bhavan's Sheth R. A. College of Science, Ahmedabad, Gujarat 380001, India, and eResearch Centre for Crystalline Materials, School of Science and Technology, Sunway University, 47500 Bandar Sunway, Selangor Darul Ehsan, Malaysia
*Correspondence e-mail: julio@power.ufscar.br
The title compound, C15H13BrO2S, comprises three different substituents bound to a central (and chiral) methine-C atom, i.e. (4-bromophenyl)sulfanyl, benzaldehyde and methoxy residues: crystal symmetry generates a A twist in the molecule is evident about the methine-C—C(carbonyl) bond as evidenced by the O—C—C—O torsion angle of −20.8 (7)°. The dihedral angle between the bromobenzene and phenyl rings is 43.2 (2)°, with the former disposed to lie over the oxygen atoms. The most prominent feature of the packing is the formation of helical supramolecular chains as a result of methyl- and methine-C—H⋯O(carbonyl) interactions. The chains assemble into a three-dimensional architecture without directional interactions between them. The nature of the weak points of contacts has been probed by a combination of Hirshfeld surface analysis, non-covalent interaction plots and interaction energy calculations. These point to the importance of weaker H⋯H and C—H⋯C interactions in the consolidation of the structure.
Keywords: crystal structure; sulfanyl; phenylethanone; Hirshfeld surface analysis; NCI plots; computational chemistry.
CCDC reference: 1915470
1. Chemical context
Recently, the et al., 2018). This was evaluated as a part of on-going studies into the conformational and electronic characteristics of various β-thiocarbonyl, β-bis-thiocarbonyl and β-thio-β-oxacarbonyl compounds, and their selenium counterparts, employing infrared spectroscopy, computational chemistry and X-ray crystallographic methods (Vinhato et al., 2013; Zukerman-Schpector et al., 2015; Caracelli et al., 2015; Traesel et al., 2018). In particular, the evaluation of the anti-inflammatory activity of what could be selective COX-2 inhibitors (Cerqueira et al., 2017) motivates these investigations, which are supported by molecular designed to ascertain the mechanism(s) of inhibition (Baptistini, 2015). Subsequently, crystals of the title bromo analogue (I) were obtained: the is reported herein along with an analysis of the calculated Hirshfeld surfaces, non-covalent interaction plots (for selected interactions) as well as a computational chemistry study.
determination of the chloro analogue of the title compound was described (Caracelli2. Structural commentary
The molecular structure of (I), Fig. 1, is isostructural with the previously described chloro analogue, (II) (Caracelli et al., 2018). Here, the central chiral methine-C8 atom is connected to (4-bromophenyl)sulfanyl, phenylethanone and methoxy groups. There is a twist in the ethanone residue as seen in the value of the O1—C8—C9—O2 torsion angle of −20.8 (7)°, with the oxygen atoms being approximately syn. The dihedral angle between the bromobenzene and phenyl rings is 43.2 (2)°, indicative of an inclined relative disposition. Globally, the bromobenzene ring is orientated towards the ethanone residue.
The geometric parameters in (I) can be compared with those of (II): the twist about the central C8—C9 bond is approximately the same in (II), i.e. the the O1—C8—C9—O2 torsion angle is 19.3 (7)°, as is the dihedral angle of 42.9 (2)° between the aromatic rings. The overlay diagram in Fig. 2 highlights the close similarity between the molecular structures of (I) and (II).
3. Supramolecular features
The main feature of the molecular packing of (I) is the presence of C—H⋯O interactions where the carbonyl-O2 atom accepts two contacts from methyl-C7-H and methine-C8-H atoms derived from the same molecule to generate six-membered {⋯O⋯HCOCH} synthons, Table 1. The result is a supramolecular chain propagating along [001] with an helical topology (21 symmetry), Fig. 3(a). The chains pack without directional interactions between them, Fig. 3(b).
4. Hirshfeld surface analysis
The Hirshfeld surface calculations for (I) were performed in accord with protocols described recently (Tan et al., 2019) employing Crystal Explorer (Turner et al., 2017). Over and above the analysis of the important surface contacts in the crystal of (I), the results are compared with those for the recently determined isostructural chloro analogue (II) (Caracelli et al., 2018). The crystal of (I) has similar intermolecular C—H⋯O interactions (Table 1) and short interatomic H⋯H, C⋯H and C⋯C contacts (Table 2) as in isostructural (II), as detailed below.
The intermolecular contacts in (I), Tables 1 and 2, are characterized as the pair of bright-red spots near the carbonyl-O2 atom, and each of the methyl-H7A and methine-H8 atoms on the Hirshfeld surfaces mapped over dnorm in the images of Fig. 4. Further, interactions are indicated by the faint-red spots near the methyl-H7B and H7C, phenyl-H14, bromobenzene-C6 and carbonyl-C9 atoms in Fig. 4. On the Hirshfeld surfaces mapped over the calculated electrostatic potential in the images of Fig. 5, the donors and acceptors of intermolecular interactions are viewed as blue and red regions around the participating atoms corresponding to positive and negative potentials, respectively. The environment around a reference molecule within the dnorm-mapped Hirshfeld surface highlighting the intermolecular C—H⋯O interactions and short interatomic H⋯H, C⋯H/H⋯C and C⋯C contacts is illustrated in Fig. 6.
From the overall two-dimensional fingerprint plot in Fig. 7(a), and also those delineated into H⋯H, O⋯H/H⋯O, C⋯H/H⋯C, C⋯C and Br⋯H/H⋯Br contacts in Fig. 7(b)–(f), respectively, it is evident that the plots are basically identical in shape to those calculated for the chloro analogue (II) with only slight differences in the distribution of points (Caracelli et al., 2018). The percentage contributions from the different interatomic contacts to the Hirshfeld surfaces of (I) and (II) are summarized in Table 3; these values again highlight the similarities between (I) and (II).
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The C—H⋯O contacts significant in the crystal of (I), Table 1, are represented as the pair of spikes at de + di ∼2.3 Å in the fingerprint plot delineated into O⋯H/H⋯O contacts, Fig. 7(c). The short interatomic H⋯H, C⋯H/H⋯C and C⋯C contacts (Table 2) are characterized as pair of beak-shape tips at de + di ∼2.1 Å, Fig. 7(b), and forceps at de + di ∼2.8 Å, Fig. 7(d), and vase-shaped distribution of points at de + di ∼3.3 Å, Fig. 7(e), in the respective delineated fingerprint plots. In addition to these contacts, the crystal also features short interatomic Br⋯H/H⋯Br contacts appearing as the pair of forceps-like tips at de + di ∼3.0 Å in the delineated fingerprint plot of Fig. 7(f). The small contribution from other remaining interatomic contacts summarized in Table 3 have a negligible effect on the packing.
5. Interaction energies
The pairwise interaction energies between the molecules within the crystal are calculated by the summation of four energy components comprising electrostatic (Eele), polarization (Epol), dispersion (Edis) and exchange-repulsion (Erep) (Turner et al., 2017). These energies were obtained by using the wave function calculated at the HF/STO-3G level theory for each of (I) and (II). The individual energy components as well as total interaction energy relative to reference molecule within the molecular cluster were calculated. Table 4 summarizes quantitatively the strength and nature of intermolecular interactions in the crystals of (I) and (II).
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It is observed from the interaction energies calculated between the reference molecule and the symmetry-related molecules at R = 6.40 and 6.13 Å (where R is the separation of the centres of gravity of the molecules), respectively (Table 4), that the almost identical values of the electrostatic energy component are due to intermolecular C—H⋯O interactions whereas the dispersive components are dominant owing to the short interatomic contacts between the same molecules. The other short interatomic C⋯H/H⋯C contact between the methyl-H7C and phenyl-C6 atoms in (I) and (II), and the H12⋯Br1 contact in (I) have a major contribution from dispersion components.
The magnitudes of intermolecular energies are represented graphically in the energy frameworks for (I) and (II) viewed down the c axes are shown in Fig. 8. Here, the supramolecular architecture of the crystals is represented as cylinders joining centroids of molecular pairs. The red, green and blue coloration represent the energy components Eele, Edisp and Etot, respectively. The radius of the cylinder is proportional to the magnitude of interaction energy which are adjusted to the same scale factor (3 kJ mol−1) within 4 × 4 × 4 unit cells. From the energy frameworks for (I) and (II) illustrated in Fig. 8, it is clearly evident that the supramolecular associations viewed down the c axis are identical, reflecting the isostructural relationship between (I) and (II).
6. Non-covalent interaction plots
The non-covalent interaction plot (NCIplot) analysis was used in the present study in order to confirm the attractive nature of some of the specified intermolecular contacts (Contreras-García et al., 2011). This method is based on the electron density and its derivatives allowing the visualization of the gradient isosurfaces. The colour-based isosurfaces correspond to the values of sign(λ2)ρ(r), where ρ is the electron density and λ2 is the second eigenvalue of the Hessian matrix of ρ (Johnson et al., 2010). The isosurfaces for the interactions between the carbonyl-O2 and each of the methyl-H7B and phenyl-H14 atoms, the H7B and H14 atoms, and the chlorobenzene-C6 and methyl-H7C atoms are shown in the upper views of Fig. 9(a)–(c), respectively. The green isosurface observed in each of these indicates a weakly attractive interaction as opposed to attractive (blue isosurface) or repulsive (red). The lower views of Fig. 9, where the plots of the RDG versus sign(λ2)ρ(r) are depicted, the non-covalent interaction peaks appear at density values equal or lower than 0.01 a.u., consistent with weakly attractive interactions.
7. Database survey
There are three literature structures related to (I), namely the already mentioned (II) (NIBTAW; Caracelli et al., 2018), the S-bound 4-methoxybenzene derivative [(III); JUPLOZ; Caracelli et al., 2015] and the S-bound 4-tolyl species [NOVGIQ; (IV); Zukerman-Schpector et al., 2015] derivatives. All four compounds crystallize in the orthorhombic Pca21 and are isostructural. The differences between the molecules of (I)–(IV) relates to the relative orientations of the S-bound methoxybenzene ring in (III). This comes about owing to a twist about the C8—S1 bond as manifested in the C4—S1—C8—C9 torsion angles of 57.1 (4), 57.3 (5), 46.6 (3) and 57.9 (3)° for (I)–(IV), respectively. This difference notwithstanding, the angles between the S-bound benzene rings and the phenyl rings in (I)–(IV) span a relatively narrow range of values, i.e. 43.2 (2), 42.9 (2), 40.11 (16) and 44.03 (16)°, respectively.
8. Synthesis and crystallization
Firstly, 4′-bromothiophenol (10.0 g, 52.9 mmol) was reacted with bromine (3.1 ml, 56.0 mmol) in dichloromethane (400 ml) on a hydrated silica gel support (50 g of SiO2 and water (30 ml) to give 4′-bromophenyl disulfide (8.0 g, yield 80%). A brown solid was obtained after filtration and evaporation without further purification (Ali & McDermott, 2002). Then, a solution of 2-methoxy acetophenone (Sigma–Aldrich; 1.0 ml, 7.3 mmol) in THF (25 ml), was added dropwise to a cooled (195 K) solution of diisopropylamine (1.1 ml, 8.0 mmol) and n-butyllithium (5.4 ml, 7.3 mmol) in THF (30 ml). After 30 mins, a solution of 4′-bromophenyl disulfide (2.8 g, 7.3 mmol) with hexamethylphosphoramide (HMPA) (1.3 ml, ca 7.3 mmol) dissolved in THF (35 ml) was added dropwise to the enolate solution (Zoretic & Soja, 1976). After stirring for 3 h, water (70 ml) was added at room temperature and extraction with diethyl ether ensued. The organic layer was then treated with a of ammonium chloride until neutral pH was reached and then dried over anhydrous magnesium sulfate. A brown oil was obtained after evaporation of the solvent. Purification through flash with n-hexane was used in order to remove the non-polar reactant (disulfide), then with dry acetone to give a mixture of both acetophenones (product and reactant). Crystallization was performed by vapour diffusion of n-hexane into a chloroform solution held at 283 K to give the pure product (0.6 g, yield = 70%). Irregular colourless crystals suitable for X-ray diffraction of (I) were obtained by the same pathway. M.p. 357.0–357.5 K. 1H NMR (CDCl3, 500 MHz, δ ppm): 3.67 (s, 3H), 5.87 (s, 1H), 7.20–7.23 (m, 2H), 7.39–7.41 (m, 2H), 7.44–7.47 (m, 2H), 7.57–7.62 (m, 1H), 7.92–7.94 (m, 2H). 13C NMR (CDCl3, 125 MHz, δ p.p.m.): 190.16, 135.73, 134.18, 133.53, 132.13, 129.92, 128.81, 128.57, 123.41, 89.28, 56.10. Microanalysis calculated for C15H13BrO2S (%): C 53.42, H 3.89. Found (%): C 53.19, H 3.85. High-Resolution MS [M+, M2+] calculated: 335.9820, 337.9799; found: 335.9797, 337.9778.
9. details
Crystal data, data collection and structure . The carbon-bound H atoms were placed in calculated positions (C—H = 0.93–0.98 Å) and were included in the in the riding-model approximation, with Uiso(H) set to 1.2–1.5Ueq(C). The was determined based on differences in Friedel pairs included in the data set (Parsons et al., 2013).
details are summarized in Table 5
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Supporting information
CCDC reference: 1915470
https://doi.org/10.1107/S2056989019006765/hb7825sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S2056989019006765/hb7825Isup2.hkl
Supporting information file. DOI: https://doi.org/10.1107/S2056989019006765/hb7825Isup3.cml
Data collection: APEX2 (Bruker, 2009); cell
SAINT (Bruker, 2009); data reduction: SAINT (Bruker, 2009); program(s) used to solve structure: SIR2014 (Burla et al., 2015); program(s) used to refine structure: SHELXL2014 (Sheldrick, 2015); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012) and DIAMOND (Brandenburg, 2006); software used to prepare material for publication: MarvinSketch (ChemAxon, 2010) and publCIF (Westrip, 2010).C15H13BrO2S | Dx = 1.569 Mg m−3 |
Mr = 337.21 | Mo Kα radiation, λ = 0.71073 Å |
Orthorhombic, Pca21 | Cell parameters from 1496 reflections |
a = 18.0683 (13) Å | θ = 2.8–23.5° |
b = 8.0190 (6) Å | µ = 3.02 mm−1 |
c = 9.8513 (5) Å | T = 293 K |
V = 1427.35 (16) Å3 | Irregular, colourless |
Z = 4 | 0.47 × 0.20 × 0.14 mm |
F(000) = 680 |
Bruker APEXII CCD diffractometer | 1903 reflections with I > 2σ(I) |
φ and ω scans | Rint = 0.037 |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | θmax = 26.4°, θmin = 2.3° |
Tmin = 0.545, Tmax = 0.745 | h = −22→22 |
6329 measured reflections | k = −10→7 |
2820 independent reflections | l = −10→12 |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.035 | H-atom parameters constrained |
wR(F2) = 0.086 | w = 1/[σ2(Fo2)] where P = (Fo2 + 2Fc2)/3 |
S = 0.90 | (Δ/σ)max < 0.001 |
2820 reflections | Δρmax = 0.24 e Å−3 |
173 parameters | Δρmin = −0.36 e Å−3 |
1 restraint | Absolute structure: Flack x determined using 702 quotients [(I+)-(I-)]/[(I+)+(I-)] (Parsons et al., 2013) |
Primary atom site location: structure-invariant direct methods | Absolute structure parameter: 0.013 (11) |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
x | y | z | Uiso*/Ueq | ||
C1 | 0.3809 (4) | 0.7980 (8) | 0.2687 (6) | 0.0481 (16) | |
C2 | 0.3282 (4) | 0.7230 (8) | 0.3471 (6) | 0.0547 (17) | |
H2 | 0.2844 | 0.6846 | 0.3086 | 0.066* | |
C3 | 0.3411 (4) | 0.7049 (8) | 0.4862 (6) | 0.0573 (18) | |
H3 | 0.3059 | 0.6531 | 0.5406 | 0.069* | |
C4 | 0.4057 (3) | 0.7634 (8) | 0.5432 (5) | 0.0442 (14) | |
C5 | 0.4582 (4) | 0.8394 (7) | 0.4612 (6) | 0.0481 (15) | |
H5 | 0.5020 | 0.8793 | 0.4989 | 0.058* | |
C6 | 0.4456 (4) | 0.8561 (8) | 0.3225 (5) | 0.0470 (15) | |
H6 | 0.4808 | 0.9063 | 0.2671 | 0.056* | |
C7 | 0.6000 (4) | 0.6921 (10) | 0.7438 (8) | 0.074 (2) | |
H7A | 0.6041 | 0.6513 | 0.8351 | 0.111* | |
H7C | 0.5822 | 0.8049 | 0.7453 | 0.111* | |
H7B | 0.6477 | 0.6889 | 0.7009 | 0.111* | |
C8 | 0.4826 (3) | 0.5677 (7) | 0.7324 (5) | 0.0446 (14) | |
H8 | 0.4910 | 0.5417 | 0.8284 | 0.053* | |
C9 | 0.4446 (3) | 0.4212 (7) | 0.6661 (5) | 0.0417 (14) | |
C10 | 0.3832 (3) | 0.3328 (7) | 0.7355 (6) | 0.0424 (13) | |
C11 | 0.3535 (3) | 0.1926 (8) | 0.6732 (7) | 0.0547 (17) | |
H11 | 0.3720 | 0.1580 | 0.5897 | 0.066* | |
C12 | 0.2968 (4) | 0.1035 (8) | 0.7336 (7) | 0.0660 (18) | |
H12 | 0.2773 | 0.0102 | 0.6904 | 0.079* | |
C13 | 0.2689 (4) | 0.1533 (9) | 0.8592 (7) | 0.067 (2) | |
H13 | 0.2308 | 0.0938 | 0.9005 | 0.080* | |
C14 | 0.2986 (4) | 0.2922 (9) | 0.9210 (7) | 0.069 (2) | |
H14 | 0.2800 | 0.3273 | 1.0043 | 0.083* | |
C15 | 0.3551 (4) | 0.3791 (10) | 0.8614 (7) | 0.0613 (18) | |
H15 | 0.3751 | 0.4708 | 0.9060 | 0.074* | |
O1 | 0.5500 (2) | 0.5910 (6) | 0.6703 (4) | 0.0573 (11) | |
O2 | 0.4633 (2) | 0.3773 (6) | 0.5525 (4) | 0.0623 (12) | |
S1 | 0.41992 (10) | 0.7500 (2) | 0.72103 (15) | 0.0551 (4) | |
Br1 | 0.36371 (4) | 0.82410 (9) | 0.07901 (8) | 0.0718 (3) |
U11 | U22 | U33 | U12 | U13 | U23 | |
C1 | 0.060 (4) | 0.045 (4) | 0.039 (3) | 0.011 (3) | −0.008 (3) | 0.001 (3) |
C2 | 0.046 (4) | 0.060 (5) | 0.059 (4) | 0.001 (3) | −0.001 (3) | 0.005 (3) |
C3 | 0.062 (4) | 0.054 (5) | 0.056 (4) | −0.002 (4) | 0.005 (3) | 0.012 (3) |
C4 | 0.050 (3) | 0.044 (4) | 0.039 (3) | 0.007 (3) | 0.006 (3) | 0.000 (2) |
C5 | 0.048 (4) | 0.045 (4) | 0.052 (3) | 0.001 (3) | −0.006 (3) | 0.000 (3) |
C6 | 0.048 (4) | 0.047 (4) | 0.045 (3) | 0.005 (3) | 0.009 (3) | 0.005 (2) |
C7 | 0.073 (5) | 0.091 (6) | 0.058 (5) | −0.028 (4) | −0.002 (4) | 0.001 (4) |
C8 | 0.051 (4) | 0.050 (4) | 0.032 (2) | −0.004 (3) | −0.002 (3) | 0.005 (3) |
C9 | 0.054 (4) | 0.041 (4) | 0.030 (3) | 0.012 (3) | −0.005 (3) | 0.003 (2) |
C10 | 0.049 (3) | 0.038 (3) | 0.041 (3) | 0.005 (3) | −0.010 (3) | 0.005 (3) |
C11 | 0.055 (4) | 0.055 (4) | 0.055 (4) | 0.006 (3) | −0.005 (3) | −0.008 (3) |
C12 | 0.055 (4) | 0.069 (5) | 0.074 (4) | −0.012 (4) | −0.012 (4) | −0.003 (4) |
C13 | 0.052 (5) | 0.071 (5) | 0.077 (5) | −0.009 (3) | −0.004 (4) | 0.028 (4) |
C14 | 0.074 (5) | 0.079 (6) | 0.056 (4) | −0.010 (4) | 0.005 (4) | 0.002 (4) |
C15 | 0.071 (5) | 0.072 (5) | 0.042 (3) | −0.012 (4) | 0.003 (3) | −0.004 (3) |
O1 | 0.058 (3) | 0.070 (3) | 0.044 (2) | −0.009 (2) | 0.003 (2) | −0.001 (2) |
O2 | 0.081 (3) | 0.068 (3) | 0.037 (2) | −0.004 (2) | 0.007 (2) | −0.009 (2) |
S1 | 0.0774 (11) | 0.0497 (9) | 0.0382 (7) | 0.0083 (9) | 0.0041 (9) | −0.0035 (7) |
Br1 | 0.0797 (5) | 0.0905 (5) | 0.0450 (3) | 0.0229 (4) | −0.0087 (4) | 0.0030 (4) |
C1—C6 | 1.365 (9) | C8—C9 | 1.510 (7) |
C1—C2 | 1.366 (9) | C8—S1 | 1.853 (6) |
C1—Br1 | 1.905 (6) | C8—H8 | 0.9800 |
C2—C3 | 1.398 (8) | C9—O2 | 1.221 (6) |
C2—H2 | 0.9300 | C9—C10 | 1.482 (8) |
C3—C4 | 1.378 (9) | C10—C11 | 1.389 (8) |
C3—H3 | 0.9300 | C10—C15 | 1.391 (9) |
C4—C5 | 1.388 (8) | C11—C12 | 1.384 (9) |
C4—S1 | 1.773 (5) | C11—H11 | 0.9300 |
C5—C6 | 1.392 (8) | C12—C13 | 1.395 (10) |
C5—H5 | 0.9300 | C12—H12 | 0.9300 |
C6—H6 | 0.9300 | C13—C14 | 1.378 (9) |
C7—O1 | 1.414 (8) | C13—H13 | 0.9300 |
C7—H7A | 0.9600 | C14—C15 | 1.369 (10) |
C7—H7C | 0.9600 | C14—H14 | 0.9300 |
C7—H7B | 0.9600 | C15—H15 | 0.9300 |
C8—O1 | 1.375 (6) | ||
C6—C1—C2 | 121.8 (5) | O1—C8—H8 | 108.7 |
C6—C1—Br1 | 118.9 (5) | C9—C8—H8 | 108.7 |
C2—C1—Br1 | 119.3 (5) | S1—C8—H8 | 108.7 |
C1—C2—C3 | 118.9 (7) | O2—C9—C10 | 119.5 (5) |
C1—C2—H2 | 120.5 | O2—C9—C8 | 119.6 (5) |
C3—C2—H2 | 120.5 | C10—C9—C8 | 120.8 (5) |
C4—C3—C2 | 120.4 (6) | C11—C10—C15 | 118.0 (6) |
C4—C3—H3 | 119.8 | C11—C10—C9 | 118.1 (5) |
C2—C3—H3 | 119.8 | C15—C10—C9 | 123.8 (5) |
C3—C4—C5 | 119.4 (5) | C12—C11—C10 | 120.9 (6) |
C3—C4—S1 | 120.3 (5) | C12—C11—H11 | 119.5 |
C5—C4—S1 | 120.2 (5) | C10—C11—H11 | 119.5 |
C4—C5—C6 | 120.1 (6) | C11—C12—C13 | 120.1 (6) |
C4—C5—H5 | 120.0 | C11—C12—H12 | 119.9 |
C6—C5—H5 | 120.0 | C13—C12—H12 | 119.9 |
C1—C6—C5 | 119.3 (6) | C14—C13—C12 | 118.9 (6) |
C1—C6—H6 | 120.4 | C14—C13—H13 | 120.6 |
C5—C6—H6 | 120.4 | C12—C13—H13 | 120.6 |
O1—C7—H7A | 109.5 | C15—C14—C13 | 120.8 (7) |
O1—C7—H7C | 109.5 | C15—C14—H14 | 119.6 |
H7A—C7—H7C | 109.5 | C13—C14—H14 | 119.6 |
O1—C7—H7B | 109.5 | C14—C15—C10 | 121.3 (7) |
H7A—C7—H7B | 109.5 | C14—C15—H15 | 119.4 |
H7C—C7—H7B | 109.5 | C10—C15—H15 | 119.4 |
O1—C8—C9 | 108.4 (4) | C8—O1—C7 | 114.6 (5) |
O1—C8—S1 | 114.0 (4) | C4—S1—C8 | 101.3 (3) |
C9—C8—S1 | 108.1 (4) | ||
C6—C1—C2—C3 | −0.2 (10) | O2—C9—C10—C15 | −176.3 (6) |
Br1—C1—C2—C3 | −179.8 (5) | C8—C9—C10—C15 | 1.9 (8) |
C1—C2—C3—C4 | 0.6 (10) | C15—C10—C11—C12 | 1.2 (9) |
C2—C3—C4—C5 | −0.5 (9) | C9—C10—C11—C12 | 179.2 (5) |
C2—C3—C4—S1 | 176.7 (5) | C10—C11—C12—C13 | −0.4 (9) |
C3—C4—C5—C6 | −0.1 (9) | C11—C12—C13—C14 | 0.2 (10) |
S1—C4—C5—C6 | −177.2 (5) | C12—C13—C14—C15 | −0.7 (11) |
C2—C1—C6—C5 | −0.3 (9) | C13—C14—C15—C10 | 1.6 (11) |
Br1—C1—C6—C5 | 179.3 (4) | C11—C10—C15—C14 | −1.7 (10) |
C4—C5—C6—C1 | 0.5 (9) | C9—C10—C15—C14 | −179.6 (6) |
O1—C8—C9—O2 | −20.8 (7) | C9—C8—O1—C7 | −163.5 (5) |
S1—C8—C9—O2 | 103.2 (5) | S1—C8—O1—C7 | 76.1 (6) |
O1—C8—C9—C10 | 160.9 (4) | C3—C4—S1—C8 | 102.0 (5) |
S1—C8—C9—C10 | −75.0 (5) | C5—C4—S1—C8 | −80.9 (5) |
O2—C9—C10—C11 | 5.7 (8) | O1—C8—S1—C4 | 63.5 (4) |
C8—C9—C10—C11 | −176.0 (5) | C9—C8—S1—C4 | −57.1 (4) |
D—H···A | D—H | H···A | D···A | D—H···A |
C7—H7A···O2i | 0.96 | 2.47 | 3.296 (9) | 144 |
C8—H8···O2i | 0.98 | 2.44 | 3.331 (6) | 150 |
Symmetry code: (i) −x+1, −y+1, z+1/2. |
Contact | Distance | Symmetry operation |
(I) | ||
H7B···H14 | 2.15 | 1 - x, - y, -1/2 + z |
H7C···C6 | 2.74 | 1 - x, 2 - y, 1/2 + z |
H12···Br1 | 3.02 | 1/2 - x, -1 + y, 1/2 + z |
C6···C9 | 3.355 (8) | 1 - x, 1 - y, -1/2 + z |
(II) | ||
H7B···H14 | 2.10 | 1 - x, - y, 1/2 + z |
H7B···C14 | 2.76 | 1 - x, - y, 1/2 + z |
H7C···C6 | 2.73 | 1 - x, 1 - y, 1/2 + z |
C6···C9 | 3.334 (9) | 1 - x, - y, 1/2 + z |
Notes: (a) The interatomic distances are calculated in Crystal Explorer (Turner et al., 2017) whereby the X—H bond lengths are adjusted to their neutron values. |
Contact | Percentage contribution | |
(I), X = Br | (II), X = Cl | |
H···H | 39.3 | 39.1 |
O···H/H···O | 11.0 | 10.7 |
C···H/H···C | 23.2 | 23.0 |
X···H/H···X | 12.8 | 13.3 |
S···H/H···S | 4.4 | 4.3 |
X···S/S···X | 2.1 | 2.3 |
X···O/O···X | 2.1 | 2.1 |
C···O/O···C | 1.5 | 1.5 |
C···X/X···C | 1.5 | 1.8 |
C···S/S···C | 1.2 | 1.1 |
C···C | 0.6 | 0.6 |
Contact | R (Å) | Eele | Epol | Edis | Erep | Etot |
(I) | ||||||
C7—H7A···O2i + | ||||||
C8—H8···O2i + | ||||||
H7B···H14i + | ||||||
C6···C9i | 6.40 | -20.0 | -12.1 | -53.2 | 34.0 | -48.0 |
H7C···C6ii | 8.75 | -7.0 | -1.2 | -16.7 | 9.3 | -15.4 |
H12···Br1ii | 10.83 | -4.1 | -0.9 | -12.9 | 6.4 | -11.2 |
(II) | ||||||
C7—H7A···O2iii + | ||||||
C8—H8···O2iii + | ||||||
H7B···H14iii + | ||||||
C6···C9iii + | ||||||
H7B···C14iii | 6.13 | -19.5 | -11.8 | -52.7 | 35.1 | -46.6 |
H7C···C6iv | 9.06 | -6.6 | -1.4 | -14.5 | 8.2 | -14.0 |
Notes: Symmetry operations: (i) 1 - x, 1 - y, -1/2 + z; (ii) 1 - x, 2 - y, 1/2 + z; (iii) 1 - x, - y, 1/2 + z; (iv) 1 - x, 1 - y, 1/2 + z. |
Footnotes
‡Additional correspondence author, e-mail: edwardt@sunway.edu.my.
Acknowledgements
Professor Regina H. A. Santos from IQSC-USP for the X-ray data collection.
Funding information
The Brazilian agencies São Paulo Research Foundation (FAPESP), for financial support of this research, Coordination for the Improvement of Higher Education Personnel, for a scholarship to to HJT (CAPES 3300201191P0 and Finance Code 001), and the National Council for Scientific and Technological Development, for fellowships (CNPq: 308480/2016–3 to IC; 303207/2017–5 to JZ-S; 301180/2013–0 to PRO), are gratefully acknowledged. Crystallographic research at Sunway University is supported by Sunway University Sdn Bhd (grant. No. STR-RCTR-RCCM-001–2019).
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