research communications
Redetermination and new description of the 6Mg(SO4)4
of vanthoffite, NaaUniversity of Copenhagen, Department of Geosciences, Denmark, and bDepartment of Geosciences, University of Padova, Italy
*Correspondence e-mail: toncib@ign.ku.dk
The 6Mg(SO4)4, was solved in the year 1964 on a synthetic sample [Fischer & Hellner (1964). Acta Cryst. 17, 1613]. Here we report a redetermination of its on a mineral sample with improved precision. It was refined in the P21/c from a crystal originating from Surtsey, Iceland. The unique Mg (site symmetry ) and the two S atoms are in usual, only slightly distorted octahedral and tetrahedral coordinations, respectively. The three independent Na atoms are in a distorted octahedral coordination (1×) and distorted 7-coordinations intermediate between a `split octahedron' and a pentagonal bipyramid (2×). [MgO6] coordination polyhedra interchange with one half of the sulfate tetrahedra in <011> chains forming a (100) meshed layer, with dimers formed by edge-sharing [NaO7] polyhedra filling the interchain spaces. The other [NaO7] polyhedra are organized in a parallel layer formed by [010] and [001] chains united through edge sharing and bonds to the remaining half of sulfate groups and to [NaO6] octahedra. The two types of layers interconnect through tight bonding, which explains the lack of morphological characteristics typical of layered structures.
of vanthoffite {hexasodium magnesium tetrakis[sulfate(VI)]}, NaKeywords: crystal structure; vanthoffite; Na-Mg sulfate; atomic coordinations; redetermination.
CCDC reference: 1999656
1. Chemical context
Vanthoffite is an evaporitic mineral that occurs worldwide in various salt, potash and sulfate marine deposits. It is also reported from the fumaroles of Kamchatka (Pekov et al., 2015) and Iceland (Balić-Žunić et al., 2016). Fischer & Hellner (1964) solved its giving the parameters, and atomic coordinates with isotropic atomic displacement parameters. To the best of our knowledge the only other determination and of an isostructural compound is for Na6Mn(SO4)4 (Sharma et al., 2017).
Here we report a redetermination and ) because of the capabilities of modern X-ray diffraction equipment based on a hybrid photon-counting detector. The obtained R factor for the observed reflection data is 3.2% compared to 6.4% for the previous and the standard deviations of the atomic coordinates and displacement parameters are three to five times smaller. Consequently, the standard deviations of bond lengths and angles are generally ten or more times smaller than previously reported. Comparing our results with those of Fischer & Hellner (1964), we conclude that no differences of substantial character can be observed, and this pays a special credit to the latter work done with significantly more effort than needed for the present one. The improvement in precision that we obtained, however, allows us to evaluate important structural details that were until now lacking for vanthoffite.
of the of vanthoffite, complete with anisotropic displacement parameters and provide a more detailed description. The precision of the present results is significantly better compared to the previous data of Fischer & Hellner (19642. Structural commentary
In this work, we use three distortion parameters for the description of deviations of atomic coordinations from an ideal geometrical arrangement, viz. asphericity, eccentricity and volume distortion, as defined by Balić-Žunić & Makovicky (1996), and Makovicky & Balić-Žunić (1998). Numerical values of these parameters are collated in Table 1. They are useful because they clearly define the type and reason for distortion (in the case of a Jahn–Teller effect or the presence of lone electron pairs), and at the same time define the closest type of the coordination polyhedron.
2.1. Coordination polyhedra of Mg and S atoms
The unique Mg atom is located on a symmetry centre and is octahedrally coordinated by O atoms, whereas the two independent S atoms form tetrahedral sulfate groups with oxygen atoms (Fig. 1). The coordinations of Mg and S show very small distortions from the ideal octahedral and tetrahedral arrangements, respectively. As can be seen from Table 1, both S coordination polyhedra have very similar parameters. They are slightly eccentric; the longest bonds are to the O atoms that they share with Mg. This is plausible, because Mg has a larger and a higher charge than Na. The Mg is even less distorted than those of S. The eccentricity is zero, in accordance with the site being on a symmetry centre and the other two distortion parameters are very low. The anisotropy of the displacement parameters of oxygen atoms bonded to S and Mg, with the overall oblate character of their ellipsoids and the longest diameters approximately perpendicular to the bonding directions, suggests, together with a low anisotropy of S and Mg displacement parameters, a rotational displacement of the coordination polyhedra around their centres (Fig. 1). Each of the vertices of an [MgO6] octahedron is shared with one sulfate tetrahedron, in an arrangement known as a pinwheel structure (Moore, 1973).
2.2. Coordination polyhedra of Na atoms
The coordination environment for Na atoms is distorted octahedral in the case of Na1 and split-octahedral with a and 3). We consider only the O atoms closer than 3 Å to be bonded to Na. There are further O atoms in the neighbourhood of Na, listed by Fischer & Hellner (1964), but we note that the distance gap to these additional O atoms is significant and their bonding contribution negligible according to bond-valence calculations. The volume distortions of the coordination polyhedra around Na2 and Na3 lie between those of an ideal pentagonal bipyramid (0) and an ideal `split octahedron' (0.1333). The latter type of coordination was described in detail by Edenharter (1976) and Makovicky & Balić-Žunić (1998). The of Na2 (Fig. 2) can either be described as a pentagonal bipyramid with O4 and O6 as polar vertices, or as a split octahedron with O5 and O8 as a split vertex. Likewise, the of Na3 (Fig. 3) can either be described as a distorted pentagonal bipyramid with O2 and O6 as polar vertices, or as a split octahedron with the second O2 and O5 as a split vertex. It can, furthermore, be seen from Figs. 2 and 3 that coordination polyhedra of Na2 and Na3 each share two edges with sulfate tetrahedra. Edges O5–O8 and O6–O8 of [Na2O7] are shared with two [S2O4] tetrahedra, whereas edges O2–O3 and O5–O7 of [Na3O7] are shared with a S1 and a S2 coordination tetrahedron, respectively.
(CN) of 7 for the other two independent Na sites (Figs. 22.3. Description of the as an arrangement of coordination polyhedra of cations
The A and B (Figs. 4 and 5). Layer A is centred on the (0, y, z) plane and built of coordination polyhedra of Mg, S1 and Na3 (Fig. 6). [MgO6] octahedra share four vertices with four [S1O4] tetrahedra. They form intersecting chains running along the <011> directions. Sharma et al. (2017) described the of the vanthoffite type as having an infinite two-dimensional framework of Mg coordination polyhedra and sulphate groups in the bc plane (which we confirm), but describe this framework as being composed of interconnected chains parallel to [010], which is an obvious mistake, as can be seen from Fig. 6. In layer A, [Na3O7] coordination polyhedra are arranged in pairs that share a common edge (O2–O2′). If we consider the coordination polyhedra of Mg and Na3 alone, they form chains parallel to [001] in which the Mg and Na coordination polyhedra also share edges (O1–O3). The chains interconnect through common O7 vertices, belonging to both the Mg and Na3 coordination polyhedra. The [Na3O7] polyhedron also shares its O2–O3 edge with an [S1O4] tetrahedron as mentioned above, plus an O1 vertex with another [S1O4] tetrahedron.
of vanthoffite can be described as an interchange of two types of layers parallel to {100}, here labelledLayer B is centred on the (1/2, y, z) plane and built of coordination polyhedra of Na1, Na2 and S2 (Fig. 7). [Na2O7] coordination polyhedra form chains around the c symmetry planes, by sharing O4 vertices. These chains run along [001]. They also form chains along [010] and around 21 axes by sharing O8 vertices. The two types of chains interconnect by sharing O6–O6′ edges, in the middle of which are situated symmetry centres. As mentioned above, [S2O4] tetrahedra, located in this layer, share two edges (O5–O8 and O6–O8) with [Na2O7] polyhedra. Na1 atoms lie in distorted octahedral holes formed between neighbouring A and B layers. The corresponding [Na1O6] octahedra share O4–O8 and O5–O8 edges with [Na2O7] and O2–O5 edges with [Na3O7]. There are further interconnections between the two types of layers (O5–O6 edges shared by Na3 and Na2, O5–O7 edges shared by Na3 and S2, plus several shared vertices).
Fischer & Hellner (1964) described the of vanthoffite as a distorted hexagonal close packing of sulfate groups, with Mg in ¼ of the octahedral holes. The authors did not specify the orientation of the close-packed sulfate layers. There are indeed approximately eutactic layers of sulfate groups parallel to the (001) plane. Their composition and stacking, however, deviate considerably from an ideal eutaxy. Moreover, considering the full framework of coordination polyhedra and chemical bonds, the structure is best described as layered parallel to (100) as in this work and in Hawthorne et al. (2000). Most of the previous authors essentially ignored the function of the [NaOx] coordination polyhedra in building the and just mentioned the placement of Na in the holes of the framework of the Mg and S coordination polyhedra. Only Fischer (1973) discussed the three Na coordination types in this structure in a conference abstract. Since Na is the dominating cation in vanthoffite, the structure-building role of the [NaOx] coordination polyhedra also needs to be considered, as we have tried to do in this article.
Vanthoffite is characterized by having six times as many Na atoms as Mg ones. The availability of Na coordination polyhedra in close contact, defining a three-dimensional framework, makes it a potential Na+ ionic conductor. Sharma et al. (2017) found a high Na+ conductivity only in the material obtained after the transition of vanthoffite-type Na6Mn(SO4)4 to a high-temperature phase. We hope that the present detailed description can help in understanding why Na+ conductivity is observed in the high-temperature form only (once its structure is known), but not in the vanthoffite structure itself.
3. Synthesis and crystallization
The crystal used for the
analysis originates from a sample from Surtsey, collected in 1971 by Dr Svein Peter Jakobsson from the Icelandic Institute of Natural History, four years after the end of eruption that formed this volcanic island. The sample number in the mineral collection of the Institute is IN7484.4. Refinement
Crystal data, data collection and structure . Atomic sites were labelled to correspond to the original description of the (Fischer & Hellner, 1964). A chemical analysis of the analysed crystal was not performed because of its very small size. As is typical for minerals from volcanic fumaroles, the mineral is fine grained and intimately mixed with several other phases, which makes an accurate chemical analysis extremely difficult, even on a larger sample. The correspondence of the current crystal-structure parameters to those of the synthetic compound and the results of structural indicate that the chemical composition is indeed very close to ideal without apparent influence from chemical impurities.
details are summarized in Table 2
|
Supporting information
CCDC reference: 1999656
https://doi.org/10.1107/S2056989020005873/wm5553sup1.cif
contains datablock I. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S2056989020005873/wm5553Isup2.hkl
Supporting information file. DOI: https://doi.org/10.1107/S2056989020005873/wm5553Isup3.cml
Data collection: CrysAlis PRO (Rigaku OD, 2019); cell
CrysAlis PRO (Rigaku OD, 2019); data reduction: CrysAlis PRO (Rigaku OD, 2019); program(s) used to solve structure: Superflip (Oszlányi & Sütő, 2004; Palatinus & Chapuis, 2007); program(s) used to refine structure: Jana2006 (Petříček et al., 2014); molecular graphics: ATOMS (Dowty, 2005).Na6Mg(SO4)4 | F(000) = 540 |
Mr = 546.5 | Dx = 2.682 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ycb | Cell parameters from 3897 reflections |
a = 9.7761 (6) Å | θ = 2.3–31.7° |
b = 9.1998 (4) Å | µ = 1.04 mm−1 |
c = 8.2040 (5) Å | T = 296 K |
β = 113.518 (7)° | Plate, colourless |
V = 676.56 (7) Å3 | 0.03 × 0.02 × 0.004 mm |
Z = 2 |
SuperNova Rigaku Oxford Diffraction diffractometer with Pilatus200K detector | 2211 independent reflections |
Radiation source: micro-focus sealed X-ray tube, SuperNova (Mo) X-ray Source | 1432 reflections with I > 3σ(I) |
Mirror monochromator | Rint = 0.087 |
Detector resolution: 5.8140 pixels mm-1 | θmax = 31.9°, θmin = 2.3° |
ω scans | h = −14→14 |
Absorption correction: multi-scan (CrysAlisPro; Rigaku OD, 2019) | k = −13→13 |
Tmin = 0.860, Tmax = 1.000 | l = −12→11 |
18695 measured reflections |
Refinement on F | 0 restraints |
R[F2 > 2σ(F2)] = 0.032 | 0 constraints |
wR(F2) = 0.037 | Weighting scheme based on measured s.u.'s w = 1/(σ2(F) + 0.0001F2) |
S = 1.29 | (Δ/σ)max = 0.047 |
2211 reflections | Δρmax = 0.61 e Å−3 |
124 parameters | Δρmin = −0.67 e Å−3 |
x | y | z | Uiso*/Ueq | ||
S1 | 0.14002 (6) | 0.30539 (6) | 0.22425 (8) | 0.01023 (19) | |
S2 | 0.66143 (6) | 0.35283 (6) | 0.34685 (8) | 0.01116 (19) | |
Mg1 | 0 | 0 | 0 | 0.0097 (4) | |
Na1 | 0.31120 (11) | 0.01426 (11) | 0.46772 (12) | 0.0173 (4) | |
Na2 | 0.44443 (12) | 0.15141 (12) | 0.09037 (14) | 0.0262 (4) | |
Na3 | 0.88822 (12) | 0.13860 (11) | 0.31627 (14) | 0.0231 (4) | |
O1 | 0.03029 (18) | 0.18470 (18) | 0.1553 (2) | 0.0153 (6) | |
O2 | 0.13531 (19) | 0.39708 (19) | 0.0752 (2) | 0.0169 (6) | |
O3 | 0.0954 (2) | 0.39427 (19) | 0.3441 (2) | 0.0197 (7) | |
O4 | 0.28894 (18) | 0.24382 (19) | 0.3187 (2) | 0.0198 (7) | |
O5 | 0.66765 (19) | 0.19352 (18) | 0.3593 (2) | 0.0175 (6) | |
O6 | 0.6464 (2) | 0.4160 (2) | 0.5023 (2) | 0.0208 (7) | |
O7 | 0.80007 (17) | 0.40614 (19) | 0.3324 (2) | 0.0154 (6) | |
O8 | 0.53693 (18) | 0.39792 (19) | 0.1825 (2) | 0.0190 (6) |
U11 | U22 | U33 | U12 | U13 | U23 | |
S1 | 0.0103 (3) | 0.0099 (3) | 0.0103 (3) | −0.0010 (2) | 0.0039 (2) | −0.0008 (2) |
S2 | 0.0109 (3) | 0.0099 (3) | 0.0126 (3) | 0.0001 (2) | 0.0046 (2) | 0.0006 (2) |
Mg1 | 0.0096 (5) | 0.0090 (6) | 0.0101 (5) | 0.0002 (4) | 0.0034 (4) | −0.0002 (4) |
Na1 | 0.0195 (5) | 0.0154 (5) | 0.0181 (5) | −0.0002 (4) | 0.0088 (4) | 0.0005 (4) |
Na2 | 0.0266 (6) | 0.0187 (6) | 0.0259 (6) | −0.0064 (4) | 0.0026 (5) | −0.0002 (5) |
Na3 | 0.0257 (6) | 0.0206 (6) | 0.0305 (6) | 0.0040 (4) | 0.0190 (5) | 0.0039 (5) |
O1 | 0.0156 (8) | 0.0149 (9) | 0.0167 (9) | −0.0076 (7) | 0.0077 (7) | −0.0072 (7) |
O2 | 0.0222 (9) | 0.0155 (9) | 0.0159 (9) | 0.0009 (7) | 0.0105 (7) | 0.0041 (7) |
O3 | 0.0267 (10) | 0.0184 (10) | 0.0189 (10) | −0.0037 (8) | 0.0145 (8) | −0.0073 (8) |
O4 | 0.0118 (8) | 0.0182 (10) | 0.0251 (10) | 0.0011 (7) | 0.0028 (7) | 0.0031 (8) |
O5 | 0.0223 (9) | 0.0111 (9) | 0.0195 (9) | 0.0010 (7) | 0.0088 (7) | 0.0027 (7) |
O6 | 0.0270 (10) | 0.0198 (10) | 0.0219 (10) | −0.0028 (8) | 0.0165 (8) | −0.0052 (8) |
O7 | 0.0095 (8) | 0.0208 (9) | 0.0144 (9) | −0.0026 (7) | 0.0031 (7) | 0.0005 (7) |
O8 | 0.0113 (8) | 0.0231 (10) | 0.0174 (9) | 0.0007 (7) | 0.0003 (7) | 0.0061 (8) |
S1—O1 | 1.4897 (17) | Na1—O8i | 2.516 (2) |
S1—O2 | 1.4710 (19) | Na1—O8vii | 2.3504 (17) |
S1—O3 | 1.472 (2) | Na1—O4 | 2.406 (2) |
S1—O4 | 1.4630 (16) | Na3—O7 | 2.628 (2) |
S2—O7 | 1.490 (2) | Na3—O1viii | 2.305 (2) |
S2—O5 | 1.4687 (18) | Na3—O5 | 2.374 (2) |
S2—O8 | 1.4703 (15) | Na3—O2i | 2.438 (2) |
S2—O6 | 1.461 (2) | Na3—O2ix | 2.5219 (18) |
Mg1—O7i | 2.0765 (15) | Na3—O3i | 2.641 (2) |
Mg1—O7ii | 2.0765 (15) | Na3—O6v | 2.7595 (18) |
Mg1—O1 | 2.0732 (17) | Na2—O5 | 2.4368 (18) |
Mg1—O1iii | 2.0732 (17) | Na2—O8 | 2.447 (2) |
Mg1—O3iv | 2.099 (2) | Na2—O8i | 2.945 (2) |
Mg1—O3v | 2.099 (2) | Na2—O4 | 2.969 (3) |
Na1—O7i | 2.4691 (19) | Na2—O4v | 2.3460 (19) |
Na1—O5vi | 2.340 (2) | Na2—O6i | 2.349 (2) |
Na1—O2vii | 2.369 (2) | Na2—O6v | 2.438 (3) |
O1—S1—O2 | 109.45 (9) | O7—Na3—O1viii | 98.11 (7) |
O1—S1—O3 | 107.87 (11) | O7—Na3—O5 | 57.17 (6) |
O1—S1—O4 | 109.04 (10) | O7—Na3—O2i | 138.97 (9) |
O2—S1—O3 | 108.49 (11) | O7—Na3—O2ix | 107.61 (6) |
O2—S1—O4 | 110.90 (12) | O7—Na3—O3i | 155.25 (6) |
O3—S1—O4 | 111.03 (10) | O7—Na3—O6v | 92.37 (6) |
O7—S2—O5 | 108.68 (11) | O1viii—Na3—O5 | 146.76 (7) |
O7—S2—O8 | 106.29 (11) | O1viii—Na3—O2i | 122.88 (8) |
O7—S2—O6 | 110.50 (11) | O1viii—Na3—O2ix | 85.01 (7) |
O5—S2—O8 | 109.97 (9) | O1viii—Na3—O3i | 72.61 (7) |
O5—S2—O6 | 110.59 (11) | O1viii—Na3—O6v | 89.22 (7) |
O8—S2—O6 | 110.70 (11) | O5—Na3—O2i | 85.18 (7) |
O7i—Mg1—O7ii | 180 | O5—Na3—O2ix | 121.59 (8) |
O7i—Mg1—O1 | 93.89 (6) | O5—Na3—O3i | 119.63 (7) |
O7i—Mg1—O1iii | 86.11 (6) | O5—Na3—O6v | 71.75 (7) |
O7i—Mg1—O3iv | 86.17 (7) | O2i—Na3—O2ix | 76.82 (6) |
O7i—Mg1—O3v | 93.83 (7) | O2i—Na3—O3i | 55.92 (7) |
O7ii—Mg1—O1 | 86.11 (6) | O2i—Na3—O6v | 90.26 (6) |
O7ii—Mg1—O1iii | 93.89 (6) | O2ix—Na3—O3i | 94.63 (6) |
O7ii—Mg1—O3iv | 93.83 (7) | O2ix—Na3—O6v | 159.78 (7) |
O7ii—Mg1—O3v | 86.17 (7) | O3i—Na3—O6v | 65.16 (6) |
O1—Mg1—O1iii | 180 | O5—Na2—O8 | 59.06 (6) |
O1—Mg1—O3iv | 89.68 (7) | O5—Na2—O8i | 75.29 (6) |
O1—Mg1—O3v | 90.32 (7) | O5—Na2—O4 | 83.23 (7) |
O1iii—Mg1—O3iv | 90.32 (7) | O5—Na2—O4v | 143.28 (8) |
O1iii—Mg1—O3v | 89.68 (7) | O5—Na2—O6i | 121.73 (7) |
O3iv—Mg1—O3v | 180 | O5—Na2—O6v | 76.71 (7) |
O7i—Na1—O5vi | 99.95 (7) | O8—Na2—O8i | 128.07 (7) |
O7i—Na1—O2vii | 114.43 (7) | O8—Na2—O4 | 76.04 (7) |
O7i—Na1—O8i | 56.73 (6) | O8—Na2—O4v | 86.11 (6) |
O7i—Na1—O8vii | 142.59 (9) | O8—Na2—O6i | 179.16 (7) |
O7i—Na1—O4 | 86.12 (7) | O8—Na2—O6v | 94.82 (8) |
O5vi—Na1—O2vii | 87.54 (8) | O8i—Na2—O4 | 75.26 (6) |
O5vi—Na1—O8i | 91.31 (7) | O8i—Na2—O4v | 141.22 (7) |
O5vi—Na1—O8vii | 89.82 (6) | O8i—Na2—O6i | 52.75 (6) |
O5vi—Na1—O4 | 173.33 (8) | O8i—Na2—O6v | 97.65 (7) |
O2vii—Na1—O8i | 170.73 (6) | O4—Na2—O4v | 100.43 (7) |
O2vii—Na1—O8vii | 101.91 (7) | O4—Na2—O6i | 104.22 (8) |
O2vii—Na1—O4 | 87.42 (7) | O4—Na2—O6v | 159.86 (6) |
O8i—Na1—O8vii | 87.27 (7) | O4v—Na2—O6i | 93.06 (7) |
O8i—Na1—O4 | 94.35 (8) | O4v—Na2—O6v | 96.74 (8) |
O8vii—Na1—O4 | 86.94 (6) | O6i—Na2—O6v | 85.18 (8) |
Symmetry codes: (i) −x+1, y−1/2, −z+1/2; (ii) x−1, −y+1/2, z−1/2; (iii) −x, −y, −z; (iv) −x, y−1/2, −z+1/2; (v) x, −y+1/2, z−1/2; (vi) −x+1, −y, −z+1; (vii) x, −y+1/2, z+1/2; (viii) x+1, y, z; (ix) x+1, −y+1/2, z+1/2. |
Cation | CN | <d> (Å) | bvs | Vp (Å3) | vd | asp | ecc |
S1 | 4 | 1.474 | 6.002 | 1.643 (4) | 0.0003 | 0 | 0.0115 |
S2 | 4 | 1.473 | 6.027 | 1.637 (4) | 0.0006 | 0 | 0.0124 |
Mg | 6 | 2.083 | 2.094 | 11.99 (2) | 0.0046 | 0.0060 | 0 |
Na1 | 6 | 2.408 | 1.177 | 17.18 (2) | 0.0716 | 0.0119 | 0.0392 |
Na2 | 7 | 2.561 | 1.074 | 24.64 (4) | 0.0674 | 0.0586 | 0.0480 |
Na3 | 7 | 2.524 | 1.071 | 22.76 (3) | 0.0957 | 0.0602 | 0.1492 |
Notes: CN = coordination number; <d> = average bond length; bvs = bond valence sum, calculated using the exponential function of Brown & Altermatt (1985) with the parameters of Breese & O'Keeffe (1991); Vp = polyhedral volume; vd = volume distortion; asp = asphericity; ecc = eccentricity. |
Acknowledgements
We are indebted to the Icelandic Institute of Natural History and the late Dr Svein Peter Jakobsson for providing us with the sample containing vanthoffite crystals.
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