research communications
Crystal structures of Zn(cyclam)I2 (second monoclinic polymorph) and Zn(cyclam)I(I3)
aL.V. Pisarzhevskii Institute of Physical Chemistry of the National Academy of Sciences of Ukraine, Prospekt Nauki 31, Kyiv 03028, Ukraine, and b"Petru Poni" Institute of Macromolecular Chemistry, Department of Inorganic, Polymers, Aleea Grigore Ghica Voda 41A, RO-700487 Iasi, Romania
*Correspondence e-mail: lampeka@adamant.net
The κ4N1,N4,N8,N11)zinc(II) iodide, [ZnI(C10H24N4)]I, I, consists of the zinc–cyclam macrocyclic cation with one iodide anion coordinated to the metal ion [Zn—I = 2.6619 (5) Å] and the second present as a counter-ion. The of the second title compound iodido(1,4,8,11-tetraazacyclotetradecane-κ4N1,N4,N8,N11)zinc(II) triiodide, [ZnI(C10H24N4)]I3, II, consists of half of the centrosymmetric macrocyclic cation, in which the ZnII ion coordinated to an iodide anion [Zn—I = 2.766 (2) Å] is disordered over two positions [Zn⋯Zn = 0.810 (3) Å], and of the two halves of the crystallographically non-equivalent, non-coordinated, centrosymmetric triiodide anions. In both compounds, the N,N,N,N-tetradentate macrocyclic ligand is present in the most energetically favored trans-III conformation. In the crystals of I, the [Zn(C10H24N4)I]+ cations and the non-coordinated iodide anions are linked by N—H⋯I and bifurcated N—H⋯(I,I) hydrogen bonds, resulting in the formation of two-dimensional networks lying parallel to the (001) and (101) planes. In contrast, the crystals of II are built up from infinite chains of the five-coordinate macrocyclic units arranged along the b-axis direction and perpendicular sheets formed of the triiodide counter-ions without significant hydrogen bonding between them.
of the first title compound iodido(1,4,8,11-tetraazacyclotetradecane-Keywords: crystal structure; polymorph; cyclam; zinc; iodide; triiodide; hydrogen bonds.
1. Chemical context
The 14-membered tetraazamacrocycle 1,4,8,11-tetraazacyclotetradecane (C10H24N4, cyclam, L) is one of the most useful and widely studied ligands because of a number of unique properties, such as exceptionally high thermodynamic stability, kinetic inertness and unusual redox properties inherent to its complexes with transition-metal ions (Melson, 1979; Yatsimirskii & Lampeka, 1985). Typically, cyclam coordinates to the metal ion by its four N atoms in a planar manner, leaving two vacant trans binding sites in the coordination sphere for additional ligands, including halide anions as an important class. To date, a number of complexes of [M(L)]2+ cations (M = CuII, NiII, ZnII) with halides X− (X = Cl, Br, I) have been reported (Ito et al., 1984; Adam et al., 1991; Porai-Koshits et al., 1994; Chen et al., 1996; Makhaev et al., 1996; Ha, 2017; Horii et al., 2020).
Typically, the compounds under consideration are prepared by the direct reaction of MX2 salts with L. We were interested in the development of alternative methods of synthesizing zinc(II) iodide compounds by starting from the initially formed acetate or nitrate species. It was found in the course of this investigation that precipitation of Zn(L)I2 from the in situ formed acetate complex by potassium iodide in methanol solution occurs slowly (over several days) and results in the formation of the colorless compound I, the structure of which is different from that described previously (Porai-Koshits et al., 1994). When the metathesis reaction was carried out in aqueous solution, a small amount of the iodide/triiodide salt (compound II) was obtained in the form of intensely colored brown crystals. The lattice parameters for this compound were reported by Heinlein & Tebbe (1985) in an alternate setting of the (see Database Survey) but no atomic coordinates were established. Here, we report the crystal structures of these two compounds, namely, iodido-(1,4,8,11-tetraazacyclotetradecane-κ4N1N4N8N11)zinc(II) iodide, [ZnI(L)]I, I and iodido-(1,4,8,11-tetraazacyclotetradecane-κ4N1N4N8N11)zinc(II) triiodide, [ZnI(L)]I3, II.
2. Structural commentary
The molecular structure of I is shown in Fig. 1. It represents the square-pyramidal macrocyclic [Zn(L)I]+ cation with one iodide anion coordinated in the axial position of the zinc(II) ion, while the second iodide anion acts as a counter-ion.
Thus, I belongs to a rather limited family of [Zn(L)] compounds in which the ZnII ion is five-coordinated. Other distinct examples are complexes with thiolate (Notni et al., 2006) and hexacyanoferrate(3–) (Colacio et al., 2001) axial ligands. In the majority of compounds, the ZnII ion is six-coordinated. Analogously to these complexes, the macrocyclic ligand in I adopts the most energetically favorable trans-III (R,R,S,S) conformation (Bosnich et al., 1965).
The L)I]+ cation in I is characterized by a large deviation [0.4412 (14) Å] of the metal ion from the mean N4 plane of donor atoms toward the coordinated iodide ion and this results in conformational peculiarities, distinguishing it from planar tetra- or hexa-coordinated species. In particular, this deviation results in non-equivalence of the six-membered chelate rings in chair conformations with syn and anti directivity of the NH-hydrogen atoms with respect to the displacement of the metal ion. In the first case, the ring becomes more flattened at the Zn side, and in the second more puckered. Simultaneously, the five-membered rings in I adopt gauche–envelope conformations (one of the carbon atoms lies almost in the N—Zn—N plane) in contrast to the symmetric gauche conformations in planar structures.
of the [Zn(As expected, the bite angles in the five-membered chelate rings in I (ca 82.6°, Table 1) are reduced compared to the typical value of ca 85° in planar structures. At the same time, a considerable decrease in the bite angle occurs only in the `anti' six-membered chelate ring [88.94 (11)° versus ca 95° in planar structures].
The molecular structure of compound II is shown in Fig. 2. In this case the [Zn(L)] unit is centrosymmetric but the zinc(II) ion is disordered over two positions with site occupancies of 50% constrained by symmetry with a Zn1⋯Zn1i distance of 0.810 (3) Å [symmetry code: (i) −x + , −y + , −z + ]. Two crystallographically non-equivalent, non-coordinated centrosymmetric triiodide anions serve as counter-ions, with I2 and I4 occupying the inversion centers.
The structural characteristics of the [Zn(L)I]+ unit in II are in general agreement with those described above for I, with the deviation of the zinc(II) ion from the mean N4 plane being 0.381 (2) Å. The `syn' and `anti' six-membered chelate rings are characterized by even higher divergences in their bite angles as compared to I (10.5° and 6.8°, respectively, Table 1). The five-membered rings in II are also present in gauche–envelope conformations. A notable distinction in II is the considerable difference of the Zn—N bond lengths in the `syn' and `anti' six-membered chelate rings [average values = 2.01 (1) and 2.20 (2) Å, respectively], while in I this difference is only 0.015 Å.
3. Supramolecular features
The crystals of I have dual lamellar structure. The layers parallel to the ab plane are readily discernible (Fig. 3). They are composed of zigzag chains propagating along the b-axis direction, in which the links between the [Zn(L)I]+ units occur via N—H⋯I hydrogen bonds between the secondary amino groups of the macrocyclic ligands (N1—H1, N2—H2 and N3—H3) as the donors and the non-coordinated I2 anions as the acceptors (Table 2). These chains are linked in the perpendicular (a-axis) direction through weak N3—H3⋯ I1 bonds (Fig. 4). At the same time, paired hydrogen-bond contacts involving the coordinated iodide anions I1 and the N4–H4 groups of neighboring macrocycles lead to the formation of another two-dimensional network (Fig. 5). Since the existence of such hydrogen-bonded layers parallel to the (101) plane is not so evident, one of these sheets in Figs. 3 and 4 is highlighted in dark green.
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The disordered [Zn(L)I]+ cations in the crystal of II are arranged in parallel chains running along the b-axis direction (Fig. 6). The peculiarity of this structure is that all of the iodine atoms, both coordinated (I1) and those of the triiodide anions [I3/I2/I3i and I5/I4/I5ii; symmetry codes (i) −x + 2, y, −z + 1; (ii) −x + 1, y, −z + 1] lie strictly in crystallographic planes parallel to the ac plane, thus forming `purely iodide' layers separated by half of the b unit-cell length (Fig. 7). As can be seen, all of the I3—I2—I3 triiodide anions are parallel, as well as the I5—I4—I5 ones, and they form an angle of 71.5 (3)° to each other. The shortest distance between the coordinated iodide and the triiodide anion is 4.803 (3) Å (I1⋯I5), while the shortest distance between triiodide anions is 4.949 (3) Å [I3⋯I3iii; symmetry code: (iii) −x + 1, y, −z + 1]. Surprisingly, there are no hydrogen-bonding interactions in the crystal of II so its three-dimensional structure is based on weak ionic and van der Waals interactions.
4. Database survey
A search of the Cambridge Structural Database (CSD, version 5.40, last update February 2019; Groom et al., 2016) indicated that a number of compounds of the composition [M(L)]X2 have been characterized structurally. They include complexes of nickel(II) [refcodes TAZDNC01 (Ito et al., 1984); TAZDNC02–08 (Horii et al., 2020); RAPKAX (Ha, 2017); JIZTUH (Adam et al., 1991); JIZTUH01–04 (Horii et al., 2020)], copper(II) [TEGPOK (Chen et al., 1996); TUCQEN (Makhaev et al., 1996)] and zinc(II) [VUSDUI10, HEGNEM and HEGNOW (Porai-Koshits et al., 1994)] cyclam cations with the full series (except for CuLCl2) of halide anions (X = Cl, Br, I).
In the overwhelming majority of cases, these complexes form monoclinic (space group P21/c or P21/n) molecular crystals with the same structural motif: the complex moieties form infinite chains, in which they are joined by the pairs of N—H⋯X hydrogen bonds between the NH group of the macrocycle and the coordinated halide ion. On the other hand, in the case of the nickel(II), two other polymorphs of the iodide salt are known. These are also chain structures; however, one of the iodide anions is not coordinated [CAFHUM (Prasad & McAuley, 1983) and JIZTUH05–08 (Horii et al., 2020)]. The peculiarity, characteristic only of zinc(II) complexes, is that quite similar to the situation observed in II, the metal ion is disordered over two positions. It should also be noted that a degree of pyramidalization of the Zn(N4) chromophore progressively increases on going from Cl to I (the deviation of the ZnII ion from the mean N4 plane is 0.237, 0.322 and 0.385 Å, respectively) and the conformations of the chelate rings and their bite angles demonstrate systematic trends consistent with this variation. The structure of the complex [Zn(L)I]I3 is also mentioned (DEHVOB; Heinlein & Tebbe, 1985), but without atomic coordinates. The reported unit-cell parameters (space group C2/m; a = 19.189, b = 12.615, c = 10.072 Å; β = 120.65°) represent an alternative setting of the I2/m found here for II: the matrix 0 0 1 / 0 1 0 / −1 0 1 transforms the DEHVOB cell to that of II.
5. Synthesis and crystallization
All chemicals and solvents used in this work were purchased from Sigma–Aldrich and were used without further purification.
To prepare I, a solution of 48 mg (0.240 mmol) of cyclam in 2 ml of MeOH was added to a solution of 50 mg (0.228 mmol) of Zn(CH3CO2)2·2H2O in 2 ml of MeOH and the mixture was heated at ca 333 K for 10 h. After cooling, a solution of 0.6 g of KI in 4 ml of MeOH was added and the mixture was left at room temperature. After one week, colorless prismatic crystals formed were filtered off, washed with MeOH and dried in air. Yield: 79 mg (67%). Analysis calculated for C10H24N4Zn1I2: C 23.12; H 4.66; N 10.78%. Found: C 22.98; H 4.72; N 10.63%. Single crystals of I in the form of colorless prisms suitable for X-ray were picked from the sample resulting from the synthesis.
Crystals of II were obtained in an experiment when the precipitation of the product was attempted in aqueous solution. After addition of the solution of 0.5 g of KI in 0.5 ml of H2O to the solution of the nitrate salt of the macrocyclic cation [obtained in situ from 50 mg (0.25 mmol) of cyclam and 75 mg (0.25 mmol) of Zn(NO3)2·6H2O] in 2 ml of H2O, a white precipitate formed (ca 92 mg), which was filtered off and the mother liquor was left exposed to the air. After several days, a small quantity of brown crystals of II had formed, which were picked for crystallographic investigation.
6. Refinement
Crystal data, data collection and structure . All of the H atoms in I and II were placed in geometrically idealized positions and constrained to ride on their parent atoms, with C—H = 0.97 Å and N—H = 0.98 Å with Uiso(H) values of 1.2Ueq of the parent atoms.
details are summarized in Table 3
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Supporting information
https://doi.org/10.1107/S2056989021011166/hb7994sup1.cif
contains datablocks I, II. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S2056989021011166/hb7994Isup2.hkl
Structure factors: contains datablock II. DOI: https://doi.org/10.1107/S2056989021011166/hb7994IIsup3.hkl
For both structures, data collection: CrysAlis PRO (Rigaku OD, 2019); cell
CrysAlis PRO (Rigaku OD, 2019); data reduction: CrysAlis PRO (Rigaku OD, 2019); program(s) used to solve structure: SHELXT2018/2 (Sheldrick, 2015a); program(s) used to refine structure: SHELXL2018/3 (Sheldrick, 2015b); molecular graphics: Mercury (Macrae et al., 2020); software used to prepare material for publication: publCIF (Westrip, 2010).[ZnI(C10H24N4)]I | F(000) = 992 |
Mr = 519.50 | Dx = 2.104 Mg m−3 |
Monoclinic, P21/n | Mo Kα radiation, λ = 0.71073 Å |
a = 8.3837 (3) Å | Cell parameters from 3942 reflections |
b = 13.7570 (4) Å | θ = 2.1–27.3° |
c = 14.6478 (5) Å | µ = 5.25 mm−1 |
β = 103.852 (3)° | T = 293 K |
V = 1640.25 (9) Å3 | Prism, clear light colourless |
Z = 4 | 0.2 × 0.2 × 0.15 mm |
Xcalibur, Eos diffractometer | 3785 independent reflections |
Radiation source: fine-focus sealed X-ray tube, Enhance (Mo) X-ray Source | 2982 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.031 |
Detector resolution: 16.1593 pixels mm-1 | θmax = 29.1°, θmin = 2.1° |
ω scans | h = −10→10 |
Absorption correction: multi-scan (CrysAlisPro; Rigaku OD, 2019) | k = −17→11 |
Tmin = 0.650, Tmax = 1.000 | l = −18→19 |
10691 measured reflections |
Refinement on F2 | Hydrogen site location: inferred from neighbouring sites |
Least-squares matrix: full | H-atom parameters constrained |
R[F2 > 2σ(F2)] = 0.033 | w = 1/[σ2(Fo2) + (0.0145P)2] where P = (Fo2 + 2Fc2)/3 |
wR(F2) = 0.053 | (Δ/σ)max = 0.001 |
S = 1.02 | Δρmax = 0.57 e Å−3 |
3785 reflections | Δρmin = −0.83 e Å−3 |
155 parameters | Extinction correction: SHELXL2018/3 (Sheldrick 2015b), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
0 restraints | Extinction coefficient: 0.00134 (7) |
Primary atom site location: structure-invariant direct methods |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
x | y | z | Uiso*/Ueq | ||
I1 | 0.16199 (3) | 0.40650 (2) | 0.15018 (2) | 0.03711 (9) | |
Zn1 | 0.00746 (5) | 0.54540 (3) | 0.22192 (3) | 0.02665 (12) | |
N1 | −0.2241 (3) | 0.48210 (19) | 0.2122 (2) | 0.0272 (7) | |
H1 | −0.226473 | 0.423178 | 0.174250 | 0.033* | |
N2 | 0.0454 (3) | 0.5033 (2) | 0.36481 (19) | 0.0292 (7) | |
H2 | 0.003393 | 0.556139 | 0.397386 | 0.035* | |
N3 | 0.1933 (3) | 0.65217 (19) | 0.2632 (2) | 0.0282 (7) | |
H3 | 0.149659 | 0.704337 | 0.295758 | 0.034* | |
N4 | −0.0687 (3) | 0.63817 (19) | 0.1048 (2) | 0.0288 (7) | |
H4 | −0.054780 | 0.601213 | 0.050069 | 0.035* | |
C1 | −0.2327 (5) | 0.4485 (3) | 0.3069 (3) | 0.0371 (10) | |
H1A | −0.306512 | 0.393370 | 0.301155 | 0.044* | |
H1B | −0.275717 | 0.500177 | 0.339202 | 0.044* | |
C2 | −0.0644 (5) | 0.4196 (3) | 0.3632 (3) | 0.0384 (10) | |
H2A | −0.068776 | 0.402191 | 0.426776 | 0.046* | |
H2B | −0.024607 | 0.363962 | 0.334543 | 0.046* | |
C3 | 0.2174 (5) | 0.4875 (3) | 0.4148 (3) | 0.0410 (10) | |
H3A | 0.264794 | 0.437386 | 0.382861 | 0.049* | |
H3B | 0.221722 | 0.465027 | 0.478124 | 0.049* | |
C4 | 0.3177 (5) | 0.5806 (3) | 0.4193 (3) | 0.0463 (11) | |
H4A | 0.262635 | 0.631620 | 0.445670 | 0.056* | |
H4B | 0.423918 | 0.570130 | 0.462252 | 0.056* | |
C5 | 0.3457 (4) | 0.6162 (3) | 0.3260 (3) | 0.0415 (10) | |
H5A | 0.426638 | 0.667933 | 0.337714 | 0.050* | |
H5B | 0.389197 | 0.563309 | 0.295420 | 0.050* | |
C6 | 0.2140 (5) | 0.6907 (3) | 0.1731 (3) | 0.0389 (10) | |
H6A | 0.260339 | 0.641125 | 0.139970 | 0.047* | |
H6B | 0.288015 | 0.745919 | 0.183961 | 0.047* | |
C7 | 0.0475 (5) | 0.7213 (3) | 0.1152 (3) | 0.0389 (10) | |
H7A | 0.006315 | 0.775097 | 0.145756 | 0.047* | |
H7B | 0.056870 | 0.742876 | 0.053664 | 0.047* | |
C8 | −0.2429 (4) | 0.6695 (3) | 0.0832 (3) | 0.0365 (9) | |
H8A | −0.267305 | 0.706063 | 0.024857 | 0.044* | |
H8B | −0.259879 | 0.712074 | 0.132732 | 0.044* | |
C9 | −0.3590 (4) | 0.5841 (3) | 0.0740 (3) | 0.0393 (10) | |
H9A | −0.323413 | 0.534611 | 0.036061 | 0.047* | |
H9B | −0.467479 | 0.605410 | 0.040333 | 0.047* | |
C10 | −0.3724 (4) | 0.5385 (3) | 0.1661 (3) | 0.0391 (10) | |
H10A | −0.389967 | 0.589381 | 0.208462 | 0.047* | |
H10B | −0.467193 | 0.495836 | 0.154407 | 0.047* | |
I2 | −0.15695 (4) | 0.73451 (2) | 0.37919 (2) | 0.04638 (10) |
U11 | U22 | U33 | U12 | U13 | U23 | |
I1 | 0.04629 (18) | 0.03129 (16) | 0.03725 (17) | 0.00582 (11) | 0.01687 (13) | −0.00334 (11) |
Zn1 | 0.0257 (2) | 0.0263 (2) | 0.0277 (3) | −0.00164 (17) | 0.00594 (19) | 0.00302 (18) |
N1 | 0.0295 (18) | 0.0244 (16) | 0.0288 (18) | −0.0045 (13) | 0.0095 (14) | −0.0032 (13) |
N2 | 0.0333 (18) | 0.0282 (17) | 0.0252 (18) | 0.0054 (13) | 0.0054 (14) | −0.0004 (13) |
N3 | 0.0252 (17) | 0.0267 (17) | 0.0320 (19) | −0.0028 (13) | 0.0054 (14) | −0.0032 (13) |
N4 | 0.0294 (17) | 0.0297 (17) | 0.0276 (18) | −0.0024 (13) | 0.0073 (14) | −0.0020 (13) |
C1 | 0.039 (2) | 0.037 (2) | 0.039 (3) | −0.0065 (18) | 0.019 (2) | −0.0012 (19) |
C2 | 0.048 (3) | 0.037 (2) | 0.032 (2) | −0.0008 (19) | 0.014 (2) | 0.0108 (18) |
C3 | 0.050 (3) | 0.039 (3) | 0.030 (2) | 0.0088 (19) | 0.001 (2) | 0.0068 (18) |
C4 | 0.039 (3) | 0.051 (3) | 0.039 (3) | 0.009 (2) | −0.010 (2) | −0.007 (2) |
C5 | 0.025 (2) | 0.040 (2) | 0.054 (3) | −0.0029 (17) | −0.002 (2) | −0.005 (2) |
C6 | 0.042 (3) | 0.029 (2) | 0.048 (3) | −0.0098 (18) | 0.016 (2) | −0.0040 (19) |
C7 | 0.050 (3) | 0.026 (2) | 0.042 (3) | −0.0054 (18) | 0.014 (2) | 0.0059 (18) |
C8 | 0.037 (2) | 0.036 (2) | 0.034 (2) | 0.0092 (17) | 0.0049 (18) | 0.0057 (18) |
C9 | 0.027 (2) | 0.048 (3) | 0.037 (3) | 0.0015 (18) | −0.0034 (18) | −0.0012 (19) |
C10 | 0.025 (2) | 0.047 (3) | 0.044 (3) | −0.0047 (18) | 0.0070 (19) | −0.003 (2) |
I2 | 0.04667 (19) | 0.03273 (17) | 0.0554 (2) | 0.00644 (12) | 0.00368 (14) | 0.00011 (13) |
I1—Zn1 | 2.6619 (5) | C3—H3A | 0.9700 |
Zn1—N1 | 2.101 (3) | C3—H3B | 0.9700 |
Zn1—N2 | 2.121 (3) | C3—C4 | 1.525 (5) |
Zn1—N3 | 2.121 (3) | C4—H4A | 0.9700 |
Zn1—N4 | 2.110 (3) | C4—H4B | 0.9700 |
N1—H1 | 0.9800 | C4—C5 | 1.522 (6) |
N1—C1 | 1.481 (4) | C5—H5A | 0.9700 |
N1—C10 | 1.483 (4) | C5—H5B | 0.9700 |
N2—H2 | 0.9800 | C6—H6A | 0.9700 |
N2—C2 | 1.471 (4) | C6—H6B | 0.9700 |
N2—C3 | 1.468 (4) | C6—C7 | 1.509 (5) |
N3—H3 | 0.9800 | C7—H7A | 0.9700 |
N3—C5 | 1.471 (4) | C7—H7B | 0.9700 |
N3—C6 | 1.470 (4) | C8—H8A | 0.9700 |
N4—H4 | 0.9800 | C8—H8B | 0.9700 |
N4—C7 | 1.486 (4) | C8—C9 | 1.510 (5) |
N4—C8 | 1.482 (4) | C9—H9A | 0.9700 |
C1—H1A | 0.9700 | C9—H9B | 0.9700 |
C1—H1B | 0.9700 | C9—C10 | 1.516 (5) |
C1—C2 | 1.507 (5) | C10—H10A | 0.9700 |
C2—H2A | 0.9700 | C10—H10B | 0.9700 |
C2—H2B | 0.9700 | ||
N1—Zn1—I1 | 101.81 (8) | N2—C3—H3B | 109.4 |
N1—Zn1—N2 | 82.64 (11) | N2—C3—C4 | 111.3 (3) |
N1—Zn1—N3 | 155.51 (11) | H3A—C3—H3B | 108.0 |
N1—Zn1—N4 | 95.77 (11) | C4—C3—H3A | 109.4 |
N2—Zn1—I1 | 102.79 (8) | C4—C3—H3B | 109.4 |
N2—Zn1—N3 | 88.94 (11) | C3—C4—H4A | 108.4 |
N3—Zn1—I1 | 102.47 (8) | C3—C4—H4B | 108.4 |
N4—Zn1—I1 | 101.21 (8) | H4A—C4—H4B | 107.4 |
N4—Zn1—N2 | 155.76 (11) | C5—C4—C3 | 115.7 (3) |
N4—Zn1—N3 | 82.61 (11) | C5—C4—H4A | 108.4 |
Zn1—N1—H1 | 105.9 | C5—C4—H4B | 108.4 |
C1—N1—Zn1 | 108.5 (2) | N3—C5—C4 | 111.9 (3) |
C1—N1—H1 | 105.9 | N3—C5—H5A | 109.2 |
C1—N1—C10 | 111.5 (3) | N3—C5—H5B | 109.2 |
C10—N1—Zn1 | 118.3 (2) | C4—C5—H5A | 109.2 |
C10—N1—H1 | 105.9 | C4—C5—H5B | 109.2 |
Zn1—N2—H2 | 107.0 | H5A—C5—H5B | 107.9 |
C2—N2—Zn1 | 104.6 (2) | N3—C6—H6A | 110.1 |
C2—N2—H2 | 107.0 | N3—C6—H6B | 110.1 |
C3—N2—Zn1 | 115.5 (2) | N3—C6—C7 | 108.2 (3) |
C3—N2—H2 | 107.0 | H6A—C6—H6B | 108.4 |
C3—N2—C2 | 115.3 (3) | C7—C6—H6A | 110.1 |
Zn1—N3—H3 | 108.1 | C7—C6—H6B | 110.1 |
C5—N3—Zn1 | 114.5 (2) | N4—C7—C6 | 109.7 (3) |
C5—N3—H3 | 108.1 | N4—C7—H7A | 109.7 |
C6—N3—Zn1 | 103.3 (2) | N4—C7—H7B | 109.7 |
C6—N3—H3 | 108.1 | C6—C7—H7A | 109.7 |
C6—N3—C5 | 114.3 (3) | C6—C7—H7B | 109.7 |
Zn1—N4—H4 | 106.2 | H7A—C7—H7B | 108.2 |
C7—N4—Zn1 | 108.6 (2) | N4—C8—H8A | 109.2 |
C7—N4—H4 | 106.2 | N4—C8—H8B | 109.2 |
C8—N4—Zn1 | 116.1 (2) | N4—C8—C9 | 112.0 (3) |
C8—N4—H4 | 106.2 | H8A—C8—H8B | 107.9 |
C8—N4—C7 | 112.7 (3) | C9—C8—H8A | 109.2 |
N1—C1—H1A | 109.6 | C9—C8—H8B | 109.2 |
N1—C1—H1B | 109.6 | C8—C9—H9A | 108.5 |
N1—C1—C2 | 110.3 (3) | C8—C9—H9B | 108.5 |
H1A—C1—H1B | 108.1 | C8—C9—C10 | 115.2 (3) |
C2—C1—H1A | 109.6 | H9A—C9—H9B | 107.5 |
C2—C1—H1B | 109.6 | C10—C9—H9A | 108.5 |
N2—C2—C1 | 107.6 (3) | C10—C9—H9B | 108.5 |
N2—C2—H2A | 110.2 | N1—C10—C9 | 112.9 (3) |
N2—C2—H2B | 110.2 | N1—C10—H10A | 109.0 |
C1—C2—H2A | 110.2 | N1—C10—H10B | 109.0 |
C1—C2—H2B | 110.2 | C9—C10—H10A | 109.0 |
H2A—C2—H2B | 108.5 | C9—C10—H10B | 109.0 |
N2—C3—H3A | 109.4 | H10A—C10—H10B | 107.8 |
Zn1—N1—C1—C2 | −30.6 (3) | N4—C8—C9—C10 | 76.8 (4) |
Zn1—N1—C10—C9 | 46.4 (4) | C1—N1—C10—C9 | 173.2 (3) |
Zn1—N2—C2—C1 | −50.4 (3) | C2—N2—C3—C4 | −175.4 (3) |
Zn1—N2—C3—C4 | 62.3 (4) | C3—N2—C2—C1 | −178.3 (3) |
Zn1—N3—C5—C4 | −63.1 (4) | C3—C4—C5—N3 | 69.4 (4) |
Zn1—N3—C6—C7 | 53.0 (3) | C5—N3—C6—C7 | 178.0 (3) |
Zn1—N4—C7—C6 | 27.4 (3) | C6—N3—C5—C4 | 178.0 (3) |
Zn1—N4—C8—C9 | −53.1 (4) | C7—N4—C8—C9 | −179.3 (3) |
N1—C1—C2—N2 | 55.6 (4) | C8—N4—C7—C6 | 157.5 (3) |
N2—C3—C4—C5 | −68.4 (4) | C8—C9—C10—N1 | −72.4 (4) |
N3—C6—C7—N4 | −55.5 (4) | C10—N1—C1—C2 | −162.5 (3) |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1···I2i | 0.98 | 2.82 | 3.708 (3) | 151 |
N2—H2···I2 | 0.98 | 2.78 | 3.634 (3) | 146 |
N3—H3···I1ii | 0.98 | 3.20 | 3.819 (3) | 123 |
N3—H3···I2 | 0.98 | 3.13 | 3.897 (3) | 137 |
N4—H4···I1iii | 0.98 | 2.86 | 3.680 (3) | 142 |
Symmetry codes: (i) −x−1/2, y−1/2, −z+1/2; (ii) −x+1/2, y+1/2, −z+1/2; (iii) −x, −y+1, −z. |
[ZnI(C10H24N4)]I3 | F(000) = 1416 |
Mr = 773.30 | Dx = 2.448 Mg m−3 |
Monoclinic, I2/m | Mo Kα radiation, λ = 0.71073 Å |
a = 10.0629 (12) Å | Cell parameters from 2913 reflections |
b = 12.6263 (12) Å | θ = 2.0–26.7° |
c = 16.5133 (16) Å | µ = 7.05 mm−1 |
β = 90.921 (10)° | T = 293 K |
V = 2097.9 (4) Å3 | Prism, clear light red |
Z = 4 | 0.18 × 0.18 × 0.10 mm |
Xcalibur, Eos diffractometer | 1931 independent reflections |
Radiation source: fine-focus sealed X-ray tube, Enhance (Mo) X-ray Source | 1531 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.065 |
Detector resolution: 16.1593 pixels mm-1 | θmax = 25.0°, θmin = 2.0° |
ω scans | h = −11→11 |
Absorption correction: multi-scan (CrysAlisPro; Rigaku OD, 2019) | k = −14→15 |
Tmin = 0.563, Tmax = 1.000 | l = −19→19 |
1931 measured reflections |
Refinement on F2 | Primary atom site location: dual |
Least-squares matrix: full | Hydrogen site location: mixed |
R[F2 > 2σ(F2)] = 0.065 | H-atom parameters constrained |
wR(F2) = 0.209 | w = 1/[σ2(Fo2) + (0.1207P)2 + 24.1639P] where P = (Fo2 + 2Fc2)/3 |
S = 1.02 | (Δ/σ)max < 0.001 |
1931 reflections | Δρmax = 1.86 e Å−3 |
100 parameters | Δρmin = −2.20 e Å−3 |
0 restraints |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refined as a 2-component twin. |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
I1 | 0.75984 (13) | 1.000000 | 0.25422 (8) | 0.0546 (4) | |
Zn1 | 0.7426 (3) | 0.78147 (17) | 0.24844 (16) | 0.0313 (6) | 0.5 |
N1 | 0.5759 (11) | 0.7637 (8) | 0.3129 (7) | 0.054 (3) | |
H1 | 0.547169 | 0.831842 | 0.316695 | 0.065* | |
N2 | 0.6627 (11) | 0.7691 (9) | 0.1362 (6) | 0.052 (2) | |
H2 | 0.638693 | 0.836861 | 0.124367 | 0.062* | |
C1 | 0.5986 (19) | 0.7286 (12) | 0.3953 (8) | 0.071 (4) | |
H1A | 0.592616 | 0.652075 | 0.398272 | 0.085* | |
H1B | 0.532274 | 0.758792 | 0.430502 | 0.085* | |
C2 | 0.4593 (13) | 0.7157 (13) | 0.2742 (11) | 0.071 (4) | |
H2A | 0.382036 | 0.730667 | 0.306679 | 0.085* | |
H2B | 0.471137 | 0.639494 | 0.272985 | 0.085* | |
C3 | 0.4330 (15) | 0.7558 (16) | 0.1869 (12) | 0.088 (6) | |
H3A | 0.344086 | 0.734576 | 0.170108 | 0.106* | |
H3B | 0.435683 | 0.832586 | 0.187081 | 0.106* | |
C4 | 0.5303 (16) | 0.7154 (15) | 0.1257 (9) | 0.076 (5) | |
H4A | 0.541286 | 0.639577 | 0.132177 | 0.091* | |
H4B | 0.495758 | 0.728671 | 0.071478 | 0.091* | |
C5 | 0.7596 (16) | 0.7338 (12) | 0.0779 (7) | 0.063 (4) | |
H5A | 0.737529 | 0.762622 | 0.024916 | 0.076* | |
H5B | 0.757810 | 0.657158 | 0.074099 | 0.076* | |
I2 | 1.000000 | 0.500000 | 0.500000 | 0.0780 (7) | |
I3 | 0.7276 (2) | 0.500000 | 0.55899 (13) | 0.0992 (7) | |
I4 | 0.500000 | 1.000000 | 0.500000 | 0.1262 (15) | |
I5 | 0.3190 (3) | 1.000000 | 0.3615 (2) | 0.1519 (13) |
U11 | U22 | U33 | U12 | U13 | U23 | |
I1 | 0.0706 (8) | 0.0283 (6) | 0.0650 (8) | 0.000 | 0.0056 (6) | 0.000 |
Zn1 | 0.0299 (11) | 0.0357 (16) | 0.0285 (10) | 0.0018 (15) | 0.0024 (8) | 0.0004 (15) |
N1 | 0.061 (6) | 0.032 (5) | 0.070 (7) | 0.005 (5) | 0.028 (5) | 0.001 (5) |
N2 | 0.067 (6) | 0.041 (6) | 0.048 (5) | −0.005 (5) | −0.008 (5) | 0.002 (4) |
C1 | 0.109 (12) | 0.056 (8) | 0.049 (7) | −0.003 (9) | 0.028 (8) | 0.002 (6) |
C2 | 0.036 (6) | 0.062 (9) | 0.115 (13) | −0.002 (6) | 0.017 (7) | 0.003 (9) |
C3 | 0.049 (8) | 0.084 (13) | 0.131 (16) | 0.014 (8) | −0.031 (10) | −0.002 (11) |
C4 | 0.084 (10) | 0.078 (11) | 0.064 (9) | −0.008 (9) | −0.034 (8) | 0.009 (8) |
C5 | 0.104 (11) | 0.056 (9) | 0.030 (6) | −0.004 (8) | 0.010 (7) | −0.004 (5) |
I2 | 0.1383 (19) | 0.0391 (10) | 0.0555 (10) | 0.000 | −0.0321 (11) | 0.000 |
I3 | 0.1264 (15) | 0.0671 (11) | 0.1039 (13) | 0.000 | −0.0103 (11) | 0.000 |
I4 | 0.124 (2) | 0.0324 (10) | 0.227 (4) | 0.000 | 0.123 (2) | 0.000 |
I5 | 0.1283 (19) | 0.0718 (13) | 0.258 (4) | 0.000 | 0.062 (2) | 0.000 |
I1—Zn1i | 2.766 (2) | N2—C4 | 1.502 (19) |
I1—Zn1 | 2.766 (2) | N2—C5 | 1.451 (17) |
Zn1—Zn1ii | 0.810 (4) | C1—C5ii | 1.56 (2) |
Zn1—N1ii | 2.179 (10) | C2—C3 | 1.55 (2) |
Zn1—N1 | 2.014 (10) | C3—C4 | 1.51 (3) |
Zn1—N2ii | 2.210 (10) | I2—I3iii | 2.924 (2) |
Zn1—N2 | 2.014 (10) | I2—I3 | 2.924 (2) |
N1—C1 | 1.444 (19) | I4—I5iv | 2.901 (4) |
N1—C2 | 1.458 (19) | I4—I5 | 2.901 (4) |
Zn1i—I1—Zn1 | 171.86 (12) | C1—N1—Zn1ii | 103.7 (9) |
Zn1ii—Zn1—I1 | 164.9 (4) | C1—N1—C2 | 113.5 (12) |
Zn1ii—Zn1—N1ii | 67.6 (4) | C2—N1—Zn1ii | 111.2 (9) |
Zn1ii—Zn1—N1 | 90.6 (5) | C2—N1—Zn1 | 119.1 (9) |
Zn1ii—Zn1—N2 | 93.0 (5) | Zn1—N2—Zn1ii | 21.47 (16) |
Zn1ii—Zn1—N2ii | 65.5 (4) | C4—N2—Zn1 | 118.8 (9) |
N1ii—Zn1—I1 | 103.0 (3) | C4—N2—Zn1ii | 109.8 (8) |
N1—Zn1—I1 | 98.3 (3) | C5—N2—Zn1ii | 101.5 (8) |
N1—Zn1—N1ii | 158.18 (16) | C5—N2—Zn1 | 111.8 (8) |
N1—Zn1—N2ii | 82.2 (5) | C5—N2—C4 | 112.9 (12) |
N1ii—Zn1—N2ii | 88.4 (4) | N1—C1—C5ii | 107.7 (11) |
N2ii—Zn1—I1 | 103.4 (3) | N1—C2—C3 | 113.4 (13) |
N2—Zn1—I1 | 97.6 (3) | C4—C3—C2 | 114.3 (13) |
N2—Zn1—N1 | 98.9 (5) | N2—C4—C3 | 110.8 (13) |
N2—Zn1—N1ii | 82.9 (5) | N2—C5—C1ii | 109.8 (10) |
N2—Zn1—N2ii | 158.53 (16) | I3iii—I2—I3 | 180.0 |
Zn1—N1—Zn1ii | 21.82 (16) | I5iv—I4—I5 | 180.0 |
C1—N1—Zn1 | 114.3 (10) |
Symmetry codes: (i) x, −y+2, z; (ii) −x+3/2, −y+3/2, −z+1/2; (iii) −x+2, −y+1, −z+1; (iv) −x+1, −y+2, −z+1. |
I | II | ||
Zn1—N1 | 2.101 (3) | Zn1—N1 | 2.014 (10) |
Zn1—N2 | 2.121 (3) | Zn1—N2 | 2.014 (10) |
Zn1—N3 | 2.121 (3) | Zn1—N1i | 2.179 (10) |
Zn1—N4 | 2.110 (3) | Zn1—N2i | 2.210 (10) |
Zn1—I1 | 2.6619 (5) | Zn1—I1 | 2.766 (2) |
N1—Zn1—N4 | 95.77 (11) | N1—Zn1—N2 | 98.9 (5) |
N2—Zn1—N3 | 88.94 (11) | N1i—Zn1—N2i | 88.4 (4) |
N1—Zn1—N2 | 82.64 (11) | N1i—Zn1—N2 | 82.9 (5) |
N3—Zn1—N4 | 82.61 (11) | N1—Zn1—N2i | 82.2 (5) |
Symmetry code: (i) -x + 3/2, -y + 3/2, -z + 1/2. |
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