Jerry P. Jasinski tribute
Synthesis and R)-2-(benzylselanyl)-1-phenylethanaminium hydrogen sulfate monohydrate: and Hirshfeld surface analyses
of (aDepartment of Chemistry, University College of Science, Tumkur University, Tumkur-572 103, Karnataka, India, and bDepartment of Chemistry, Howard University, 525 College Street NW, Washington, DC, 20059, USA
*Correspondence e-mail: raghukp1@gmail.com
A hydrogen sulfate salt, C15H18NSe+·HSO4−·H2O or [BnSeCH2CH(Ph)NH3+](HSO4−), of a chiral selenated amine (R)-2-(benzylselanyl)-1-phenylethanamine (BnSeCH2CH(Ph)NH2) has been synthesized and characterized by elemental analysis,1H and 13C{1H} NMR, FT–IR analysis, and single-crystal X-ray diffraction studies. The title salt crystallizes in the monohydrate form in the non-centrosymmetric monoclinic P21 The cation is somewhat W shaped with the dihedral angle between the two aromatic rings being 60.9 (4)°. The carbon atom attached to the amine nitrogen atom is chiral and in the R configuration, and, the –C—C– bond of the –CH2—CH– fragment has a In the two HSO4− anions and two water molecules form an R44(12) tetrameric type of assembly comprised of alternating HSO4− anions and water molecules via discrete D(2) O—H⋯O hydrogen bonds. This tetrameric assembly aggregates along the b-axis direction as an infinite one-dimensional tape. Adjacent tapes are interconnected via discrete D(2) N—H⋯O hydrogen bonds between the three amino hydrogen atoms of the cation sandwiched between the two tapes and the three HSO4− anions of the nearest asymmetric units, resulting in a complex two-dimensional sheet along the ab plane. The pendant arrangement of the cations is stabilized by C—H⋯π interactions between adjacent cations running as chains down the [010] axis. Secondary Se⋯O [3.1474 (4) Å] interactions are also observed in the A Hirshfeld surface analysis, including dnorm, shape-index and fingerprint plots of the cation, anion and solvent molecule, was carried out to confirm the presence of various interactions in the crystal structure.
Keywords: crystal structure; chiral; absolute structure; selenium; SBIs; Hirshfeld surface.
CCDC reference: 2114403
1. Chemical context
Selenium is an important bio-element (Schwarz et al., 1957; Papp et al., 2007). The hypervalent nature of selenium results in interesting secondary bonding interactions (SBIs), also known as non-bonded interactions, in organoselenium compounds (Musher et al., 1969; Raghavendra Kumar et al., 2006; Chivers & Laitinen, 2015; Bleiholder et al., 2006). These structural aspects are worth exploring as weak SBIs (Iwaoka et al., 2001, 2002a,b) in the compounds of heavy chalcogens (Se and Te) are ascribed important roles in structural chemistry, such as the stabilization of otherwise unstable organo-chalcogen compounds and supramolecular associations (Tiekink & Zukerman-Schpector, 2010; Werz et al., 2002) and possessing biological activities (Reich et al., 2016; Bartolini et al., 2017; Engman et al.,1992; Mukherjee et al., 2010). Some organoselenated alkyl/arylamines have been synthesized (Singh & Srivastava, 1990; Srivastava et al., 1994; Revanna et al., 2015), but further investigations on their single-crystal X-ray structures, especially of chiral derivatives, are limited (Musher et al.,1969; Raghavendra Kumar et al., 2006; Chivers & Laitinen, 2015; Bleiholder et al., 2006, Prabhu Kumar et al., 2019). Therefore, the synthesis and discussions on the single-crystal structural features of (R)-2-(benzylselanyl)-1-phenylethanaminium hydrogen sulfate monohydrate, [BnSeCH2CH(Ph)NH3+](HSO4−), are the subject of the present paper.
2. Structural commentary
The title salt (Fig. 1) is formed by the transfer of a proton from sulfuric acid to the chiral selenated amine C15H17SeN. The of the structure consists of one (C15H18SeN)+ cation, one HSO4− anion and a solvent water molecule with no direct hydrogen-bonding interactions between them. In the HSO4− ion, three of the S—O bond lengths are almost the same, falling in the range of 1.447 (4)–1.452 (5) Å, while the fourth is slightly elongated at 1.527 (5) Å. This suggests that the three nearly identical S—O bonds have partial double-bond character owing to resonance, while the fourth S—O bond has single-bond character. This validates the formation of the salt via single proton transfer from sulfuric acid to the amine. The title salt crystallizes in the monohydrate form in the non-centrosymmetric monoclinic P21 The cation is somewhat W shaped (Fig. 1) with the dihedral angle between the two aromatic rings being 60.9 (4)°. The carbon atom attached to the amine nitrogen atom is a chiral atom with an R configuration and the –C—C– bond of the –CH2—CH– fragment has a staggered conformation.
3. Supramolecular features
The S)-1-(benzylselanyl)-3-phenylpropan-2-amine (Prabhu Kumar et al., 2019). The general rule that all strong hydrogen-bond donors participate in hydrogen bonding with strong hydrogen-bond acceptors is totally satisfied in this salt, with all the strong donors and acceptors in the cation, anion and the solvent being involved in at least one hydrogen bond. In the two HSO4− anions and two water molecules are interconnected to form a tetrameric type of assembly comprising of alternating HSO4− anions and water molecules via discrete D(2) O1—H1D⋯O2, O1—H1E⋯O5 and O3—H3A⋯O1 hydrogen bonds (Fig. 2, Table 1), with the O1—H1E⋯O5 hydrogen bond appearing twice. This tetrameric type of assembly having a R44(12) graph-set notation aggregates along the b-axis direction as an infinite one dimensional tape, with adjacent tetrameric units in the tape glued to each other through the common O1—H1E⋯O5 hydrogen bonds (Fig. 2). The O1—H1D⋯O2 and O1—H1E⋯O5 hydrogen bonds have structure-directing features along the [010] axis. Adjacent tapes, which are 5.2133 (4) Å apart (i.e. half of the unit-cell length a) along the a axis, are interconnected via discrete D(2) N1—H1A⋯O4, N1—H1B⋯O4 and N1—H1C⋯O2 hydrogen bonds (Fig. 3, Table 1) between the three amino hydrogen atoms of the cation sandwiched between the two tapes and the three HSO4− anions of the nearest asymmetric units (two HSO4− anions belong to one tape and two to the other), resulting in a complex two-dimensional sheet along the ab plane (Fig. 3). The cations serve as pendants to the complex sheet. The N1—H1A⋯O4, N1—H1B⋯O4 and N1—H1C⋯O2 interactions are not structure-directing hydrogen bonds of themselves, but structure-directional characteristics are induced to them via the O1—H1D⋯O2 and O1—H1E⋯O5 hydrogen bonds. The pendant-type arrangement of cations is stabilized by C15—H15⋯π (π electrons of the C1–C6 ring) interactions between adjacent cations running as chains down the [010] axis. Secondary Se1⋯O4(x − 1, y, z) [3.1474 (4) Å] interactions are also observed in the crystal structure.
features, by virtue of its salt form, several strong-to-moderate hydrogen bonds, which are not seen to the same extent in the reported freebase structure of the closely related compound (4. Hirshfeld surface analyses
The Hirshfeld surfaces including dnorm and shape-index and fingerprint (FP) analyses of the cation, anion and the solvent are shown in Figs. 4 and 5. In the dnorm surface of the cation (highlighting O⋯H/H⋯O contacts only; Fig. 4a), dark-red spots in the proximity of three amino hydrogen atoms are a result of strong N1—H1A⋯O4, N1—H1B⋯O4 and N1—H1C⋯O2 hydrogen bonds between the cation and HSO4− anions. Further, the Hirshfeld surface of the cation mapped over shape-index (highlighting C⋯H/H⋯C contacts only; Fig. 4b) shows a dark-red spot close to the centroid of the C1–C6 ring facing the H15 hydrogen atom, which is due to the C15—H15⋯π (π electrons of the C1–C6 ring) interactions observed between adjacent cations. The overall FP plot and those decomposed to individual atom⋯atom contacts contributing to the Hirshfeld surfaces of the cation are shown in Fig. 4c, 4d , 4e and 4f, respectively. The highest contribution to the Hirshfeld surface is from H⋯H dispersions, which contribute 48.4%, followed by C⋯H/H⋯C (26%), O⋯H/H⋯O (17.8%), Se⋯H/H⋯Se (5.7%) and others (2.1%). The symmetry about the di = de axis passing through the origin observed in the FP plots for the H⋯H and C⋯H/H⋯C contacts suggests that these interactions exist only between the cationic species and not between cation–anion or cation–water. The asymmetric nature of the FP of the O⋯H/H⋯O contacts about the di = de axis suggests that the O⋯H interactions are between unlike species, which is in agreement with the observed N—H⋯O interactions between cations and anions. A single spike observed in the FP of O⋯H/H⋯O contacts is characteristic of a strong or a moderate hydrogen bond. The spike observed at di + de ∼1.9 Å is very close to the H1C⋯O2 distance of 1.92 Å (Table 1), thus supporting the participation of the cations in various N—H⋯O hydrogen bonds. Two blunt spikes (a characteristic of a weak interaction between like species) observed in the FP of C⋯H/H⋯C contacts at di + de ∼2.8 Å is very close to the H15⋯Cg distance of 2.75 Å (Table 1), thereby confirming the presence of C—H⋯π interactions between the cations. Thus, the Hirshfeld surface analysis provides adequate and reliable evidence, both qualitatively (in terms of pictorial depiction) and quantitatively, for the various interactions in which the cations participate. Analysis of the Hirshfeld surfaces of the anion and the solvent molecule gives similar results (Fig. 5). In the case of the anion, the highest contribution to the Hirshfeld surface is from O⋯H/H⋯O contacts, contributing 88.6%, while for the Hirshfeld surface of water, 61.6% is from O⋯H/H⋯O contacts and the remaining 38.4% is from H⋯H dispersions.
5. Database survey
The cation of the reported structure is somewhat similar to that observed in a closely related structure, (S)-1-(benzylselanyl)-3-phenylpropan-2-amine (Prabhu Kumar et al., 2019), which is homologous to the cation of the title salt with one additional –CH2– group between the chiral carbon atom and its nearest aromatic ring. The configurations of the chiral carbon atom are different in the two structures. The dihedral angle between the aromatic rings in the related molecule is 66.49 (12)°, which is very similar to that observed in the title structure. No intramolecular N—H⋯Se interaction is observed in the molecular cation of the present structure, unlike in the related molecule where one is observed. In the crystal of the related amine, the molecules are linked by weak N—H⋯N interactions, generating chains along the [100] direction.
6. Synthesis and crystallization
6.1. Materials and methods
Chemical reagents were purchased from Sigma–Aldrich (India) and used without further purification unless stated otherwise. For chemical synthesis, reactions were carried out in distilled water or in laboratory-grade solvents at room temperature. Melting points were determined in capillary tubes closed at one end and were reported uncorrected. IR spectra were recorded on a Jasco FT–IR-4100 spectrometer. Specific optical rotations (SOR) were measured on a Rudolph Autopol-I automatic polarimeter using a cell of 100 mm path length. 1H and 13C{1H} NMR spectra were recorded on an AVANCE-II Bruker 400 MHz spectrometer. (R)-1-(Benzylselanyl)-2-phenylethan-2-amine was synthesized according to our reported literature procedure (Revanna et al., 2015).
6.2. Synthesis of (1R)-2-(benzylselanyl)-1-phenylethan-1-ammoniumhydrogensulfate
The chiral selenated amine (R)-2-(benzylselanyl)-1-phenylethanamine was synthesized by a sequence of reactions shown in the reaction scheme starting from (2R)-2-amino-2-phenylethan-1-ol [derived from amino acid (R)-phenylglycinal] as per the literature procedure (Revanna et al., 2015). The title salt of the above amine was obtained by treating it with sulfuric acid (5 M) in methanol under ice-cold conditions. To an ice-cold methanolic (5 mL) solution of (2R)-1-(benzylselanyl)-2-phenylethan-2-amine (0.291 g, 1 mmol) was added 5 M of H2SO4 (2 mL) under stirring. The resulting precipitate was stirred for a further hour at the same temperature. Then the precipitate was filtered and washed twice with cold methanol (10 mL × 2). The white solid obtained was recrystallized from hot methanol (10 mL), which afforded colourless crystals of the title salt. The salt is soluble in water, dimethyl formamide (DMF) and dimethyl sulfoxide (DMSO), but insoluble in methanol, chloroform, dichloromethane, ether, tetrahydrofuran (THF) and hydrocarbon solvents such as n-hexane, benzene and toluene.
Yield: 92%; m.p. 469–472 K; (c 1.0 in MeOH). Elemental analysis: found C, 46.51; H, 4.88; N, 3.54. Calculated for C15H19NO4SSe: C, 46.39; H, 4.93; N, 3.61%. FT–IR (KBr, ν cm−1): 3452, 3027, 2925, 1615, 1537, 1361, 1186, 699, 556, 477; 1H NMR (DMSO-d6, 400.233 MHz, δ ppm): 2.867–3.060 (dd, 2H, J = 9.2, 6.0 Hz, CH2Se), 3.648 (s, 2H, SeCH2), 4.329–4.351 (m, 1H, CH), 7.166–7.288 (m, 5H, ArH), 7.373–7.440 (m, 5H, ArH), 8.412 (bs, 3H, NH3);13C{1H} NMR (DMSO-d6, 100.638 MHz, δ ppm): 26.99 (CH2Se), 27.15 (SeCH2), 54.75 (CH), 126.89 (C-7), 127.73 (C-13), 128.63 (C-11, C-15), 128.89 (C-6, C-8), 128.99 (C-12, C-14), 129.09 (C-5, C-9), 137.11 (C-4), 139.25 (C-10).
7. Refinement
Crystal data, data collection and structure . The C-bound H atoms were positioned with idealized geometry and refined using a riding model: C—H = 0.93 Å and Uiso(H) = 1.2Ueq(C) for aromatic H atoms, C—H = 0.97 Å and Uiso(H) = 1.2Ueq(C) for methylene H atoms and C—H = 0.98 Å and Uiso(H) = 1.2Ueq(C) for methine H atoms. The amino H atoms and O-bound H atoms were also positioned geometrically and refined as riding: N—H = 0.89 Å with Uiso(H) = 1.2Ueq(N); Owater—H = 0.85 Å with Uiso(H) = 1.5Ueq(Owater); Oanion—H = 0.82 Å with Uiso(H) = 1.5Ueq(Oanion).
details are summarized in Table 2
|
Supporting information
CCDC reference: 2114403
https://doi.org/10.1107/S2056989021010409/yy2003sup1.cif
contains datablock I. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S2056989021010409/yy2003Isup2.hkl
Supporting information file. DOI: https://doi.org/10.1107/S2056989021010409/yy2003Isup3.cml
Data collection: APEX2 (Bruker, 2009); cell
APEX2 and SAINT-Plus (Bruker, 2009); data reduction: SAINT-Plus and XPREP (Bruker, 2009); program(s) used to solve structure: SHELXT2016/4 (Sheldrick, 2015a); program(s) used to refine structure: SHELXL2016/4 (Sheldrick, 2015b); molecular graphics: Mercury (Macrae et al., 2020); software used to prepare material for publication: SHELXL2016/4 (Sheldrick, 2015b).C15H18NSe+·HSO4−·H2O | F(000) = 416 |
Mr = 406.35 | Prism |
Monoclinic, P21 | Dx = 1.504 Mg m−3 |
Hall symbol: P 2yb | Mo Kα radiation, λ = 0.71073 Å |
a = 10.4266 (4) Å | Cell parameters from 1021 reflections |
b = 6.0539 (2) Å | θ = 2.4–27.5° |
c = 14.2168 (7) Å | µ = 2.23 mm−1 |
β = 90.261 (4)° | T = 293 K |
V = 897.38 (6) Å3 | Prism, colourless |
Z = 2 | 0.22 × 0.18 × 0.16 mm |
Bruker APEXII CCD area diffractometer | 3088 independent reflections |
Radiation source: sealed X-ray tube | 2624 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.035 |
phi and φ scans | θmax = 27.5°, θmin = 2.4° |
Absorption correction: multi-scan (SADABS; Bruker, 2009) | h = −12→13 |
Tmin = 0.624, Tmax = 0.700 | k = −6→7 |
4255 measured reflections | l = −16→18 |
Refinement on F2 | Hydrogen site location: mixed |
Least-squares matrix: full | H-atom parameters constrained |
R[F2 > 2σ(F2)] = 0.044 | w = 1/[σ2(Fo2) + (0.0556P)2] where P = (Fo2 + 2Fc2)/3 |
wR(F2) = 0.113 | (Δ/σ)max < 0.001 |
S = 0.99 | Δρmax = 0.40 e Å−3 |
3088 reflections | Δρmin = −0.48 e Å−3 |
213 parameters | Absolute structure: Flack x determined using 665 quotients [(I+)-(I-)]/[(I+)+(I-)] (Parsons et al., 2013) |
1 restraint | Absolute structure parameter: 0.002 (16) |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
x | y | z | Uiso*/Ueq | ||
O2 | 0.2505 (4) | −0.0248 (8) | −0.0946 (4) | 0.0611 (14) | |
C3 | −0.0762 (7) | −0.6548 (14) | −0.3497 (6) | 0.067 (2) | |
H3 | −0.038625 | −0.793146 | −0.342466 | 0.080* | |
C2 | −0.1040 (6) | −0.5295 (12) | −0.2720 (6) | 0.0556 (19) | |
H2 | −0.086191 | −0.584727 | −0.212284 | 0.067* | |
N1 | −0.5188 (4) | 0.2116 (9) | −0.1128 (3) | 0.0392 (13) | |
H1A | −0.531807 | 0.355694 | −0.104787 | 0.047* | |
H1B | −0.466298 | 0.161851 | −0.068113 | 0.047* | |
H1C | −0.593408 | 0.140600 | −0.109508 | 0.047* | |
O4 | 0.3706 (4) | −0.3492 (8) | −0.0578 (3) | 0.0476 (11) | |
O3 | 0.1539 (5) | −0.3689 (10) | −0.1198 (4) | 0.0627 (14) | |
H3A | 0.136250 | −0.489162 | −0.096649 | 0.094* | |
O1 | 0.0666 (5) | −0.7188 (11) | −0.0553 (7) | 0.097 (2) | |
H1D | 0.114172 | −0.832572 | −0.058680 | 0.145* | |
H1E | −0.007149 | −0.769210 | −0.041900 | 0.145* | |
SE1 | −0.35634 (5) | −0.25057 (7) | −0.14135 (4) | 0.04370 (19) | |
S1 | 0.24573 (11) | −0.2451 (4) | −0.05445 (9) | 0.0386 (3) | |
O5 | 0.1938 (3) | −0.2455 (14) | 0.0397 (3) | 0.0577 (11) | |
C6 | −0.1847 (6) | −0.239 (2) | −0.3707 (5) | 0.0576 (17) | |
H6 | −0.218500 | −0.097722 | −0.378626 | 0.069* | |
C10 | −0.5289 (5) | 0.3042 (9) | −0.2820 (4) | 0.0377 (16) | |
C15 | −0.4578 (6) | 0.3885 (12) | −0.3559 (5) | 0.0449 (15) | |
H15 | −0.370318 | 0.359532 | −0.359223 | 0.054* | |
C4 | −0.1034 (7) | −0.5772 (18) | −0.4374 (7) | 0.077 (3) | |
H4 | −0.084348 | −0.662521 | −0.489933 | 0.092* | |
C1 | −0.1588 (5) | −0.3192 (11) | −0.2815 (5) | 0.0463 (16) | |
C9 | −0.4594 (5) | 0.1722 (10) | −0.2082 (4) | 0.0360 (13) | |
H9 | −0.370076 | 0.222507 | −0.205826 | 0.043* | |
C12 | −0.7151 (7) | 0.4805 (15) | −0.3469 (6) | 0.068 (2) | |
H12 | −0.802097 | 0.513070 | −0.342967 | 0.081* | |
C14 | −0.5161 (7) | 0.5156 (13) | −0.4248 (5) | 0.0546 (18) | |
H14 | −0.467590 | 0.568783 | −0.474659 | 0.066* | |
C8 | −0.4598 (6) | −0.0755 (10) | −0.2284 (5) | 0.0404 (14) | |
H8A | −0.428439 | −0.099360 | −0.291714 | 0.048* | |
H8B | −0.547581 | −0.128372 | −0.226248 | 0.048* | |
C11 | −0.6591 (6) | 0.3503 (14) | −0.2794 (5) | 0.0573 (19) | |
H11 | −0.708984 | 0.292124 | −0.231368 | 0.069* | |
C13 | −0.6443 (7) | 0.5641 (14) | −0.4206 (5) | 0.061 (2) | |
H13 | −0.682844 | 0.651632 | −0.466410 | 0.073* | |
C7 | −0.1873 (6) | −0.1864 (11) | −0.1955 (5) | 0.0531 (19) | |
H7A | −0.183063 | −0.030709 | −0.211244 | 0.064* | |
H7B | −0.121754 | −0.215704 | −0.148436 | 0.064* | |
C5 | −0.1593 (8) | −0.3717 (18) | −0.4485 (6) | 0.075 (3) | |
H5 | −0.180219 | −0.321648 | −0.508514 | 0.090* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O2 | 0.050 (3) | 0.044 (3) | 0.089 (4) | 0.003 (2) | 0.009 (3) | 0.018 (3) |
C3 | 0.048 (4) | 0.058 (5) | 0.094 (7) | 0.000 (4) | 0.012 (4) | −0.013 (5) |
C2 | 0.044 (4) | 0.048 (4) | 0.074 (5) | 0.005 (3) | −0.001 (3) | 0.001 (4) |
N1 | 0.050 (2) | 0.034 (4) | 0.033 (2) | 0.002 (2) | −0.0048 (19) | −0.002 (2) |
O4 | 0.038 (2) | 0.052 (3) | 0.053 (3) | 0.012 (2) | 0.0011 (19) | 0.001 (2) |
O3 | 0.057 (3) | 0.068 (3) | 0.064 (3) | −0.017 (3) | −0.014 (3) | 0.002 (3) |
O1 | 0.050 (3) | 0.044 (4) | 0.197 (7) | 0.001 (3) | 0.022 (4) | 0.008 (4) |
SE1 | 0.0484 (3) | 0.0345 (3) | 0.0482 (3) | 0.0023 (4) | 0.0009 (2) | −0.0026 (4) |
S1 | 0.0342 (6) | 0.0356 (6) | 0.0460 (7) | 0.0004 (10) | 0.0002 (5) | 0.0031 (11) |
O5 | 0.048 (2) | 0.077 (3) | 0.049 (2) | 0.010 (3) | 0.0103 (18) | 0.004 (4) |
C6 | 0.050 (3) | 0.060 (4) | 0.064 (4) | −0.014 (5) | 0.011 (3) | 0.006 (6) |
C10 | 0.038 (3) | 0.037 (4) | 0.038 (3) | −0.002 (2) | 0.001 (2) | −0.001 (2) |
C15 | 0.045 (3) | 0.048 (4) | 0.041 (4) | −0.002 (3) | 0.002 (3) | 0.002 (3) |
C4 | 0.056 (5) | 0.089 (7) | 0.084 (7) | −0.011 (5) | 0.028 (5) | −0.032 (6) |
C1 | 0.034 (3) | 0.042 (4) | 0.062 (4) | −0.005 (3) | 0.007 (3) | −0.002 (3) |
C9 | 0.039 (3) | 0.032 (3) | 0.037 (3) | −0.001 (2) | 0.002 (2) | −0.001 (2) |
C12 | 0.044 (4) | 0.093 (7) | 0.065 (5) | 0.006 (4) | −0.014 (4) | 0.015 (5) |
C14 | 0.072 (5) | 0.055 (4) | 0.037 (4) | −0.005 (4) | 0.004 (3) | 0.009 (3) |
C8 | 0.044 (3) | 0.036 (3) | 0.041 (3) | −0.003 (3) | −0.003 (3) | −0.012 (3) |
C11 | 0.039 (3) | 0.079 (5) | 0.054 (4) | 0.000 (3) | 0.003 (3) | 0.009 (4) |
C13 | 0.065 (5) | 0.065 (5) | 0.053 (5) | 0.008 (4) | −0.017 (4) | 0.010 (4) |
C7 | 0.043 (3) | 0.051 (5) | 0.065 (4) | −0.004 (3) | 0.000 (3) | −0.011 (3) |
C5 | 0.060 (5) | 0.103 (7) | 0.063 (5) | −0.019 (5) | 0.012 (4) | 0.008 (5) |
O2—S1 | 1.452 (5) | C10—C11 | 1.386 (8) |
C3—C4 | 1.361 (13) | C10—C9 | 1.503 (8) |
C3—C2 | 1.373 (10) | C15—C14 | 1.384 (9) |
C3—H3 | 0.9300 | C15—H15 | 0.9300 |
C2—C1 | 1.402 (10) | C4—C5 | 1.383 (14) |
C2—H2 | 0.9300 | C4—H4 | 0.9300 |
N1—C9 | 1.512 (7) | C1—C7 | 1.495 (9) |
N1—H1A | 0.8900 | C9—C8 | 1.527 (8) |
N1—H1B | 0.8900 | C9—H9 | 0.9800 |
N1—H1C | 0.8900 | C12—C11 | 1.370 (10) |
O4—S1 | 1.447 (4) | C12—C13 | 1.380 (11) |
O3—S1 | 1.527 (5) | C12—H12 | 0.9300 |
O3—H3A | 0.8200 | C14—C13 | 1.370 (10) |
O1—H1D | 0.8500 | C14—H14 | 0.9300 |
O1—H1E | 0.8500 | C8—H8A | 0.9700 |
Se1—C8 | 1.951 (6) | C8—H8B | 0.9700 |
Se1—C7 | 1.965 (6) | C11—H11 | 0.9300 |
S1—O5 | 1.447 (4) | C13—H13 | 0.9300 |
C6—C1 | 1.384 (10) | C7—H7A | 0.9700 |
C6—C5 | 1.395 (13) | C7—H7B | 0.9700 |
C6—H6 | 0.9300 | C5—H5 | 0.9300 |
C10—C15 | 1.387 (8) | ||
C4—C3—C2 | 120.2 (8) | C2—C1—C7 | 119.5 (7) |
C4—C3—H3 | 119.9 | C10—C9—N1 | 110.1 (4) |
C2—C3—H3 | 119.9 | C10—C9—C8 | 112.9 (5) |
C3—C2—C1 | 120.8 (8) | N1—C9—C8 | 108.8 (5) |
C3—C2—H2 | 119.6 | C10—C9—H9 | 108.3 |
C1—C2—H2 | 119.6 | N1—C9—H9 | 108.3 |
C9—N1—H1A | 109.5 | C8—C9—H9 | 108.3 |
C9—N1—H1B | 109.5 | C11—C12—C13 | 120.9 (7) |
H1A—N1—H1B | 109.5 | C11—C12—H12 | 119.5 |
C9—N1—H1C | 109.5 | C13—C12—H12 | 119.5 |
H1A—N1—H1C | 109.5 | C13—C14—C15 | 120.9 (7) |
H1B—N1—H1C | 109.5 | C13—C14—H14 | 119.6 |
S1—O3—H3A | 109.5 | C15—C14—H14 | 119.6 |
H1D—O1—H1E | 104.5 | C9—C8—Se1 | 114.4 (4) |
C8—Se1—C7 | 98.0 (3) | C9—C8—H8A | 108.7 |
O5—S1—O4 | 111.7 (3) | Se1—C8—H8A | 108.7 |
O5—S1—O2 | 112.3 (4) | C9—C8—H8B | 108.7 |
O4—S1—O2 | 110.8 (3) | Se1—C8—H8B | 108.7 |
O5—S1—O3 | 109.0 (3) | H8A—C8—H8B | 107.6 |
O4—S1—O3 | 109.1 (3) | C12—C11—C10 | 120.8 (6) |
O2—S1—O3 | 103.6 (3) | C12—C11—H11 | 119.6 |
C1—C6—C5 | 119.1 (10) | C10—C11—H11 | 119.6 |
C1—C6—H6 | 120.4 | C14—C13—C12 | 118.7 (7) |
C5—C6—H6 | 120.4 | C14—C13—H13 | 120.6 |
C15—C10—C11 | 118.2 (6) | C12—C13—H13 | 120.6 |
C15—C10—C9 | 117.8 (5) | C1—C7—Se1 | 113.3 (4) |
C11—C10—C9 | 123.9 (5) | C1—C7—H7A | 108.9 |
C10—C15—C14 | 120.4 (6) | Se1—C7—H7A | 108.9 |
C10—C15—H15 | 119.8 | C1—C7—H7B | 108.9 |
C14—C15—H15 | 119.8 | Se1—C7—H7B | 108.9 |
C3—C4—C5 | 120.1 (9) | H7A—C7—H7B | 107.7 |
C3—C4—H4 | 120.0 | C4—C5—C6 | 120.7 (9) |
C5—C4—H4 | 120.0 | C4—C5—H5 | 119.7 |
C6—C1—C2 | 119.1 (8) | C6—C5—H5 | 119.7 |
C6—C1—C7 | 121.5 (7) | ||
C4—C3—C2—C1 | −0.9 (12) | C10—C15—C14—C13 | 1.2 (11) |
C11—C10—C15—C14 | 0.1 (10) | C10—C9—C8—Se1 | 174.2 (4) |
C9—C10—C15—C14 | −178.5 (6) | N1—C9—C8—Se1 | −63.2 (5) |
C2—C3—C4—C5 | −0.1 (13) | C13—C12—C11—C10 | 1.8 (13) |
C5—C6—C1—C2 | 2.0 (10) | C15—C10—C11—C12 | −1.7 (11) |
C5—C6—C1—C7 | −178.4 (6) | C9—C10—C11—C12 | 176.9 (7) |
C3—C2—C1—C6 | −0.1 (10) | C15—C14—C13—C12 | −1.1 (12) |
C3—C2—C1—C7 | −179.7 (6) | C11—C12—C13—C14 | −0.4 (13) |
C15—C10—C9—N1 | 145.4 (5) | C6—C1—C7—Se1 | 93.7 (6) |
C11—C10—C9—N1 | −33.1 (8) | C2—C1—C7—Se1 | −86.7 (7) |
C15—C10—C9—C8 | −92.7 (6) | C3—C4—C5—C6 | 2.1 (13) |
C11—C10—C9—C8 | 88.7 (7) | C1—C6—C5—C4 | −3.1 (11) |
Cg is the centroid of the C1–C6 aromatic ring. |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1A···O4i | 0.89 | 2.16 | 3.003 (7) | 157 |
N1—H1B···O4ii | 0.89 | 2.05 | 2.893 (6) | 159 |
N1—H1C···O2iii | 0.89 | 1.92 | 2.812 (6) | 176 |
O1—H1D···O2iv | 0.85 | 1.91 | 2.726 (8) | 161 |
O1—H1E···O5v | 0.85 | 1.95 | 2.730 (6) | 152 |
O3—H3A···O1 | 0.82 | 1.68 | 2.483 (9) | 167 |
C15—H15···Cgvi | 0.93 | 2.75 | 3.547 (7) | 144 |
Symmetry codes: (i) x−1, y+1, z; (ii) −x, y+1/2, −z; (iii) x−1, y, z; (iv) x, y−1, z; (v) −x, y−1/2, −z; (vi) x, y+1, z. |
Footnotes
‡These authors contributed equally.
Funding information
PRK thanks the Department of Science and Technology–SERB, New Delhi, India, for financial support in the form of project No. DST/SR/S1/IC-76/2010(G).
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