research communications
Synthesis and N,N-bis(2-hydroxyethyl)amino]methyl}-5-{[(4,6-dimethylpyridin-2-yl)amino]methyl}-2,4,6-triethylbenzene
of 1,3-bis{[aInstitut für Organische Chemie, Technische Universität Bergakademie Freiberg, Leipziger Str. 29, 09599 Freiberg/Sachsen, Germany
*Correspondence e-mail: monika.mazik@chemie.tu-freiberg.de
In the 30H50N4O4, the two bis(hydroxyethyl)amino moieties and the 2,4-dimethylpyridinylamino unit of the molecule are located on one side of the central benzene ring, while the ethyl substituents are oriented in the opposite direction. The dihedral angle between the planes of the aromatic rings is 73.6 (1)°. The conformation of the molecule is stabilized by intramolecular O—H⋯O (1.86–2.12 Å) and C—H⋯N (2.40, 2.54 Å) hydrogen bonds. Dimers of inversion-related molecules represent the basic supramolecular entities of the They are further connected via O—H⋯O hydrogen bonding into undulating layers extending parallel to the crystallographic bc plane. Interlayer interaction is accomplished by weak C—H⋯π contacts.
of the title compound, CCCDC reference: 2191249
1. Chemical context
The 1,3,5-trisubstituted 2,4,6-trialkylbenzene scaffold has shown to be valuable for the construction of various artificial receptors (Hennrich & Anslyn, 2002). In the course of our research work, we have successfully used this molecular scaffold in the design of acyclic and macrocyclic receptors for neutral (Mazik, 2009, 2012; Lippe & Mazik, 2015; Lippe et al., 2015; Amrhein et al., 2016; Koch et al., 2016; Amrhein & Mazik, 2021; Köhler et al., 2020, 2021) and ionic substrates (Geffert et al., 2013; Stapf et al., 2015; Schulze et al., 2018). Our studies on the molecular recognition of have shown that the participation of different types of recognition groups in the complexation of the substrate favourably influences the binding process (Stapf et al., 2020a,b; Kaiser et al., 2019). Such a combination of two types of recognition units, namely heterocyclic and hydroxy groups, is realised in the triethylbenzene-based title compound 1 (see also Stapf et al., 2020a). The design of the receptors consisting of the aforementioned recognition units was inspired by the nature of the protein binding sites involved in the interactions stabilizing the crystalline protein–carbohydrate complexes (Quiocho, 1989). For example, 2-aminopyridine can be considered as a heterocyclic analogue of the asparagine/glutamine primary amide side chain. Furthermore, it should be noted that the formation of intramolecular interactions is also one of the factors influencing the binding properties of a receptor molecule (Rosien et al., 2013). Intramolecular interactions can also be observed in the of 1.
2. Structural commentary
In the title molecule, the structure of which is shown in Fig. 1, the functionalized side arms are arranged on one side of the central benzene ring, while the ethyl substituents are oriented in the opposite direction. One of the bis(hydroxyethyl)amino moieties is disordered over two positions [s.o.f. 0.879 (2)/0.121 (2)]. The interplanar angle between the aromatic rings is 73.6 (1)°. Within the molecule, three hydroxy groups create a continuous pattern of O—H⋯O hydrogen bonds [d(H⋯O) 1.86–2.12 Å]. The amino nitrogen atoms N3 and N4 are involved in intramolecular C—H⋯N hydrogen bonding [d(H⋯N) 2.40, 2.54 Å]. The contains four potentially solvent-accessible voids with a total volume of 110 Å3 per (Spek, 2015). The void volume of 27.5 Å3 and the maximum residual electron density of 0.55 e Å−3 indicate that the voids could be partially occupied by water molecules.
3. Supramolecular features
As depicted in Fig. 2 and Fig. 3, the is constructed of inversion-symmetric molecular dimers held together by O—H⋯N and N—H⋯O hydrogen bonding [d(H⋯N) 1.89 (2) Å; d(H⋯O) 2.19 (2) Å; graph set R22(6) (Etter, 1990; Bernstein et al., 1995)]. These dimers are further assembled via O—H⋯O [d(H⋯O) 1.99 (2) Å] and C—H⋯O [d(H⋯O) 2.45 Å] bonds (Desiraju & Steiner, 1999) into layers extending parallel to the crystallographic bc plane (Fig. 4). As the layer surfaces are defined by the ethyl groups of the molecules, interlayer association is restricted to weak C—H⋯π contacts (Nishio et al., 1995). Information regarding non-covalent bonding present in the crystal is found in Table 1.
4. Database survey
A search in the Cambridge Structural Database (CSD, Version 5.43, update November 2021; Groom et al., 2016) for 2,4,6-triethylbenzene derivatives bearing the (4,6-dimethylpyridin-2-yl)aminomethyl unit gave eight hits. In the crystal structures of the monohydrate and the methanol solvate of {1-[(3,5-bis{[(4,6-dimethylpyridin-2-yl)amino]methyl}-2,4,6-triethylbenzyl)amino]cyclopentyl}methanol (CADTAG, CADTEK; Stapf et al., 2020a), the host molecules reveal similar geometries with an alternating arrangement of the substituents above and below the plane of the central benzene ring. The crystals of these solvates are composed of inversion-symmetric dimers of 1:1 host–guest complexes held together by O—H⋯N and N—H⋯O hydrogen bonds.
In the case of the ethanol solvate of 1,3,5-tris[(4,6-dimethylpyridin-2-yl)aminomethyl]-2,4,6-triethylbenzene (RAJZAE; Mazik et al., 2004), dimers of host–guest units stabilized by O—H⋯Npyr and N—H⋯O bonds represent the basic supramolecular aggregates. The latter compound is also capable of forming crystalline complexes with methyl β-D-glucopyranoside (LAJZOP; Köhler et al., 2020). This (acetonitrile tetrasolvate monohydrate) contains two structurally different 2:1 receptor-carbohydrate complexes in which the sugar substrate is located in a cavity formed by the functionalized side arms of a pair of receptor molecules.
In the N-(1,10-phenanthrolin-2-ylcarbonyl)amino]methyl}-3,5-bis{[(4,6-dimethylpyridin-2-yl)amino]methyl}-2,4,6-triethylbenzene (ROKJEH; Mazik et al., 2008), three water molecules are accommodated in the binding pocket created by the heterocyclic units (one phenanthrolinyl and two pyridinyl groups) of the host molecule. This host–water aggregate is stabilized by O—H⋯O, N—H⋯O and O—H⋯N hydrogen bonds. In a similar way, two water molecules and one ethanol molecule are accommodated in the binding pocket of 1,3-bis{[N-(1,10-phenanthrolin-2-ylcarbonyl)amino]methyl}-5-{[(4,6-dimethylpyridin-2-yl)amino]methyl}-2,4,6-triethylbenzene (TUGVEX; Mazik et al., 2009), containing one pyridinyl and two phenanthrolinyl groups.
of 1-{[5. Synthesis and crystallization
A mixture of diethanolamine (0.18 mL, 0.20 g, 1.88 mmol), THF (10 mL) and potassium carbonate (86 mg, 0.62 mmol) was stirred at room temperature for 30 minutes. After that, a solution of 1,3-bis(bromomethyl)-5-{[(4,6-dimethylpyridin-2-yl)amino]methyl}-2,4,6-triethylbenzene (150 mg, 0.31 mmol) in 10 mL of THF/CH3CN (1:1) was added dropwise and the resulting mixture was stirred at room temperature and under light exclusion (the progress of the reaction was monitored by TLC). After filtration, the solvents were removed under reduced pressure and the residual yellow oil was treated with a THF/water mixture. Then the THF was evaporated and the resulting oil was separated from the water. The oil was again dissolved in THF and dried over MgSO4. By addition of n-hexane, the product was precipitated as a white solid (58% yield, 95 mg, 0.18 mmol). Analysis data: m.p. = 408 K; 1H NMR (500 MHz, CDCl3) δ 1.14 (t, J = 7.5 Hz, 3H, CH3), 1.19 (t, J = 7.5 Hz, 6H, CH3), 2.29 (s, 3H, CH3), 2.35 (s, 3H, CH3), 2.63 (t, J = 5.0 Hz, 8H, CH2), 2.80 (q, J = 7.5 Hz, 4H, CH2), 3.26 (q, J = 7.5 Hz, 2H, CH2), 3.50 (t, J = 5.0 Hz, 8H, CH2), 3.77 (s, 4H, CH2), 4.22 (d, J = 4.0 Hz, 2H, CH2), 4.60 (br, 1H, NH), 6.17 (s, 1H, ArH), 6.38 (s, 1H, ArH); 13C NMR (126 MHz, CDCl3) δ 15.7, 16.5, 21.2, 21.3, 22.9, 23.8, 40.8, 52.3, 55.2, 59.7, 102.7, 114.1, 131.6, 132.6, 143.5, 145.8, 149.7, 156.2, 158.0; MS (ESI): m/z calculated for C30H51N4O4: 531.4 [M + H]+, found 531.4; Rf = 0.50 (Al2O3, CHCl3/CH3OH 7:1). Crystals of the title compound suitable for X-ray analysis were obtained as colourless blocks by diffusion of n-hexane into a solution of the compound in THF.
6. Refinement
Crystal data, data collection and structure . Carbon-bound hydrogen atoms and protons of the minor (12%) positions of the disordered OH groups (H1A, H2A) were positioned geometrically and allowed to ride on their respective parent atoms, with C—H = 0.95 Å (aromatic) and 0.99 Å (methylene) and Uiso(H) = 1.2 Ueq(C), and O—H = 0.84 Å (OH) and C—H = 0.98 Å (methyl) and Uiso(H) = 1.5 Ueq(C,O), respectively. The protons of the N—H and O—H (undisordered or the main positions) were located from the residual and refined with Uiso(H) bound to the parent atom (1.2, for NH and 1.5 for OH) with distance restraints for the OH bonds (SADI). The of the disordered N(CH2CH2OH)2 group was performed using geometry (SAME) and Uij (SIMU, RIGU) restrains implemented in SHELXL (Sheldrick, 2015). The refined proportion of the two positions is 88:12%. The maximum residual peak of 0.55 e Å−3 is located inside a 27.5 Å3 void and can be refined as a partially occupied water molecule (∼6%); however, due to the low occupancy, it was not included in the final refinement.
details are summarized in Table 2
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Supporting information
CCDC reference: 2191249
https://doi.org/10.1107/S2056989022007411/jq2019sup1.cif
contains datablock I. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S2056989022007411/jq2019Isup2.hkl
Supporting information file. DOI: https://doi.org/10.1107/S2056989022007411/jq2019Isup3.cml
Data collection: APEX2 (Bruker, 2008); cell
SAINT (Bruker, 2008); data reduction: SAINT (Bruker, 2008); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL2018/3 (Sheldrick, 2015); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).C30H50N4O4 | F(000) = 1160 |
Mr = 530.74 | Dx = 1.153 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
a = 14.2508 (3) Å | Cell parameters from 5468 reflections |
b = 15.3046 (4) Å | θ = 2.7–28.2° |
c = 15.2593 (3) Å | µ = 0.08 mm−1 |
β = 113.3107 (13)° | T = 100 K |
V = 3056.43 (12) Å3 | Rod, colourless |
Z = 4 | 0.20 × 0.13 × 0.12 mm |
Bruker Kappa APEXII with CCD area detector diffractometer | Rint = 0.031 |
Radiation source: fine-focus sealed X-Ray tube | θmax = 27.4°, θmin = 3.1° |
phi and ω scans | h = −18→17 |
22458 measured reflections | k = −19→12 |
6881 independent reflections | l = −19→19 |
4968 reflections with I > 2σ(I) |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.049 | Hydrogen site location: mixed |
wR(F2) = 0.144 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.03 | w = 1/[σ2(Fo2) + (0.0773P)2 + 0.7833P] where P = (Fo2 + 2Fc2)/3 |
6881 reflections | (Δ/σ)max = 0.001 |
431 parameters | Δρmax = 0.55 e Å−3 |
290 restraints | Δρmin = −0.26 e Å−3 |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
O3 | 0.06213 (10) | 0.37633 (9) | 0.20622 (9) | 0.0317 (3) | |
H3 | 0.0307 (19) | 0.4220 (14) | 0.1746 (17) | 0.066 (8)* | |
O4 | 0.14319 (11) | 0.36916 (9) | 0.41431 (9) | 0.0344 (3) | |
H4 | 0.133 (2) | 0.3843 (18) | 0.3569 (14) | 0.075 (9)* | |
N1 | 0.27113 (11) | 0.44288 (9) | −0.07113 (9) | 0.0208 (3) | |
H1N | 0.2143 (16) | 0.4558 (13) | −0.0622 (13) | 0.031 (5)* | |
N2 | 0.15327 (11) | 0.43433 (8) | −0.22623 (9) | 0.0228 (3) | |
N4 | 0.27759 (10) | 0.34248 (8) | 0.32090 (9) | 0.0205 (3) | |
C1 | 0.35480 (12) | 0.49260 (10) | 0.09155 (10) | 0.0187 (3) | |
C2 | 0.31562 (12) | 0.57360 (10) | 0.10358 (11) | 0.0194 (3) | |
C3 | 0.30179 (12) | 0.59065 (9) | 0.18829 (11) | 0.0181 (3) | |
C4 | 0.32351 (11) | 0.52609 (10) | 0.25834 (10) | 0.0173 (3) | |
C5 | 0.35813 (12) | 0.44317 (9) | 0.24358 (10) | 0.0174 (3) | |
C6 | 0.37449 (11) | 0.42637 (10) | 0.16047 (10) | 0.0177 (3) | |
C7 | 0.36773 (12) | 0.47485 (11) | −0.00056 (11) | 0.0221 (3) | |
H7A | 0.387939 | 0.529168 | −0.023767 | 0.027* | |
H7B | 0.421962 | 0.430698 | 0.010295 | 0.027* | |
C8 | 0.25215 (12) | 0.43984 (9) | −0.16689 (11) | 0.0193 (3) | |
C9 | 0.12953 (14) | 0.42942 (11) | −0.32090 (12) | 0.0267 (4) | |
C10 | 0.20380 (14) | 0.43045 (11) | −0.35800 (12) | 0.0275 (4) | |
H10 | 0.185041 | 0.427754 | −0.425011 | 0.033* | |
C11 | 0.30622 (14) | 0.43547 (11) | −0.29619 (12) | 0.0273 (4) | |
C12 | 0.33091 (13) | 0.43981 (10) | −0.19916 (11) | 0.0233 (3) | |
H12 | 0.400235 | 0.442732 | −0.155317 | 0.028* | |
C13 | 0.01792 (15) | 0.42276 (15) | −0.38339 (14) | 0.0410 (5) | |
H13A | 0.009330 | 0.414806 | −0.449864 | 0.062* | |
H13B | −0.016851 | 0.476413 | −0.377828 | 0.062* | |
H13C | −0.011639 | 0.372699 | −0.363317 | 0.062* | |
C14 | 0.38925 (17) | 0.43524 (14) | −0.33408 (15) | 0.0413 (5) | |
H14A | 0.396002 | 0.376396 | −0.356233 | 0.062* | |
H14B | 0.454117 | 0.452731 | −0.283249 | 0.062* | |
H14C | 0.371554 | 0.476451 | −0.387372 | 0.062* | |
C15 | 0.28910 (15) | 0.64292 (11) | 0.02668 (12) | 0.0301 (4) | |
H15A | 0.232164 | 0.678992 | 0.028352 | 0.036* | |
H15B | 0.265364 | 0.614087 | −0.036485 | 0.036* | |
C16 | 0.37980 (19) | 0.70256 (13) | 0.03842 (16) | 0.0468 (6) | |
H16A | 0.435285 | 0.667612 | 0.033810 | 0.070* | |
H16B | 0.403792 | 0.731212 | 0.100914 | 0.070* | |
H16C | 0.358268 | 0.746977 | −0.011954 | 0.070* | |
C17 | 0.25925 (12) | 0.67846 (10) | 0.20094 (12) | 0.0220 (3) | |
H17A | 0.275654 | 0.688014 | 0.269611 | 0.026* | 0.879 (2) |
H17B | 0.292937 | 0.725243 | 0.179147 | 0.026* | 0.879 (2) |
H17C | 0.295174 | 0.699548 | 0.267252 | 0.026* | 0.121 (2) |
H17D | 0.268160 | 0.722174 | 0.157027 | 0.026* | 0.121 (2) |
N3 | 0.14881 (13) | 0.68479 (11) | 0.14808 (13) | 0.0210 (4) | 0.879 (2) |
C18 | 0.09000 (15) | 0.61856 (13) | 0.17436 (13) | 0.0257 (4) | 0.879 (2) |
H18A | 0.067231 | 0.643267 | 0.222641 | 0.031* | 0.879 (2) |
H18B | 0.134482 | 0.567761 | 0.203334 | 0.031* | 0.879 (2) |
C19 | −0.0016 (2) | 0.5886 (3) | 0.0894 (3) | 0.0291 (8) | 0.879 (2) |
H19A | −0.050599 | 0.637513 | 0.064946 | 0.035* | 0.879 (2) |
H19B | 0.019809 | 0.569992 | 0.037941 | 0.035* | 0.879 (2) |
O1 | −0.04980 (13) | 0.51746 (9) | 0.11566 (11) | 0.0291 (4) | 0.879 (2) |
H1 | −0.0746 (19) | 0.5386 (16) | 0.1552 (16) | 0.044* | 0.879 (2) |
C20 | 0.11081 (16) | 0.77397 (12) | 0.14305 (16) | 0.0307 (5) | 0.879 (2) |
H20A | 0.035285 | 0.772108 | 0.111954 | 0.037* | 0.879 (2) |
H20B | 0.135047 | 0.808013 | 0.100913 | 0.037* | 0.879 (2) |
C21 | 0.1402 (2) | 0.82323 (15) | 0.2360 (2) | 0.0441 (6) | 0.879 (2) |
H21A | 0.215140 | 0.831891 | 0.264051 | 0.053* | 0.879 (2) |
H21B | 0.107765 | 0.881661 | 0.222582 | 0.053* | 0.879 (2) |
O2 | 0.11150 (16) | 0.78077 (12) | 0.30323 (13) | 0.0529 (5) | 0.879 (2) |
H2 | 0.0511 (16) | 0.801 (2) | 0.292 (2) | 0.088 (12)* | 0.879 (2) |
N3A | 0.1503 (6) | 0.6654 (8) | 0.1793 (8) | 0.028 (3) | 0.121 (2) |
C18A | 0.0841 (8) | 0.6365 (8) | 0.0834 (7) | 0.022 (2) | 0.121 (2) |
H18C | 0.119291 | 0.590229 | 0.062551 | 0.026* | 0.121 (2) |
H18D | 0.071014 | 0.686176 | 0.038571 | 0.026* | 0.121 (2) |
C19A | −0.0162 (11) | 0.6017 (19) | 0.0800 (16) | 0.025 (4) | 0.121 (2) |
H19C | −0.061027 | 0.650470 | 0.081917 | 0.030* | 0.121 (2) |
H19D | −0.051601 | 0.568134 | 0.020504 | 0.030* | 0.121 (2) |
O1A | 0.0064 (10) | 0.5463 (9) | 0.1615 (10) | 0.051 (3) | 0.121 (2) |
H1A | −0.040111 | 0.550860 | 0.181942 | 0.076* | 0.121 (2) |
C20A | 0.1121 (12) | 0.7331 (9) | 0.2246 (10) | 0.050 (3) | 0.121 (2) |
H20C | 0.152433 | 0.732286 | 0.294424 | 0.060* | 0.121 (2) |
H20D | 0.039976 | 0.720561 | 0.213106 | 0.060* | 0.121 (2) |
C21A | 0.1192 (18) | 0.8226 (10) | 0.1859 (13) | 0.066 (5) | 0.121 (2) |
H21C | 0.106339 | 0.867512 | 0.226497 | 0.079* | 0.121 (2) |
H21D | 0.189389 | 0.831435 | 0.189293 | 0.079* | 0.121 (2) |
O2A | 0.0491 (14) | 0.8342 (12) | 0.0907 (11) | 0.087 (5) | 0.121 (2) |
H2A | −0.010553 | 0.825947 | 0.087201 | 0.130* | 0.121 (2) |
C22 | 0.31398 (13) | 0.54528 (10) | 0.35242 (11) | 0.0229 (3) | |
H22A | 0.299154 | 0.490307 | 0.378670 | 0.027* | |
H22B | 0.256090 | 0.585763 | 0.340778 | 0.027* | |
C23 | 0.41152 (14) | 0.58586 (11) | 0.42515 (11) | 0.0261 (4) | |
H23A | 0.469352 | 0.546753 | 0.435284 | 0.039* | |
H23B | 0.404018 | 0.594612 | 0.485670 | 0.039* | |
H23C | 0.423840 | 0.642269 | 0.401207 | 0.039* | |
C24 | 0.37421 (12) | 0.37309 (10) | 0.31879 (11) | 0.0205 (3) | |
H24A | 0.410543 | 0.322946 | 0.305591 | 0.025* | |
H24B | 0.417870 | 0.396841 | 0.382251 | 0.025* | |
C25 | 0.21403 (13) | 0.29319 (11) | 0.23560 (11) | 0.0246 (4) | |
H25A | 0.182595 | 0.243188 | 0.255098 | 0.029* | |
H25B | 0.258086 | 0.269381 | 0.204862 | 0.029* | |
C26 | 0.13072 (13) | 0.34762 (11) | 0.16397 (12) | 0.0265 (4) | |
H26A | 0.160910 | 0.398788 | 0.145041 | 0.032* | |
H26B | 0.093041 | 0.312534 | 0.106152 | 0.032* | |
C27 | 0.29400 (14) | 0.29730 (11) | 0.41001 (12) | 0.0264 (4) | |
H27A | 0.344684 | 0.330023 | 0.463986 | 0.032* | |
H27B | 0.322171 | 0.238398 | 0.408799 | 0.032* | |
C28 | 0.19565 (15) | 0.28872 (12) | 0.42530 (13) | 0.0320 (4) | |
H28A | 0.150549 | 0.245962 | 0.379068 | 0.038* | |
H28B | 0.211491 | 0.265817 | 0.490291 | 0.038* | |
C29 | 0.41588 (13) | 0.33905 (10) | 0.14462 (12) | 0.0246 (4) | |
H29A | 0.389151 | 0.326780 | 0.075312 | 0.029* | |
H29B | 0.391172 | 0.292370 | 0.175083 | 0.029* | |
C30 | 0.53240 (14) | 0.33718 (12) | 0.18528 (13) | 0.0336 (4) | |
H30A | 0.555528 | 0.279991 | 0.172831 | 0.050* | |
H30B | 0.559255 | 0.347470 | 0.254260 | 0.050* | |
H30C | 0.557266 | 0.382886 | 0.154862 | 0.050* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O3 | 0.0266 (7) | 0.0379 (7) | 0.0313 (7) | 0.0018 (6) | 0.0122 (6) | 0.0082 (6) |
O4 | 0.0409 (8) | 0.0418 (8) | 0.0244 (7) | 0.0039 (6) | 0.0170 (6) | 0.0003 (6) |
N1 | 0.0216 (7) | 0.0258 (7) | 0.0169 (7) | −0.0023 (6) | 0.0096 (6) | −0.0033 (5) |
N2 | 0.0267 (8) | 0.0207 (7) | 0.0218 (7) | 0.0009 (5) | 0.0103 (6) | 0.0008 (5) |
N4 | 0.0258 (7) | 0.0192 (6) | 0.0153 (6) | −0.0026 (5) | 0.0068 (6) | 0.0014 (5) |
C1 | 0.0180 (7) | 0.0219 (7) | 0.0168 (7) | −0.0045 (6) | 0.0077 (6) | −0.0025 (6) |
C2 | 0.0188 (8) | 0.0188 (7) | 0.0194 (8) | −0.0033 (6) | 0.0063 (6) | 0.0013 (6) |
C3 | 0.0167 (7) | 0.0153 (7) | 0.0221 (8) | −0.0014 (6) | 0.0075 (6) | −0.0011 (6) |
C4 | 0.0169 (7) | 0.0172 (7) | 0.0188 (7) | −0.0023 (6) | 0.0084 (6) | −0.0027 (6) |
C5 | 0.0178 (7) | 0.0169 (7) | 0.0168 (7) | −0.0005 (6) | 0.0062 (6) | 0.0000 (6) |
C6 | 0.0167 (7) | 0.0182 (7) | 0.0183 (7) | −0.0008 (6) | 0.0069 (6) | −0.0036 (6) |
C7 | 0.0215 (8) | 0.0286 (8) | 0.0180 (8) | −0.0041 (7) | 0.0096 (7) | −0.0028 (6) |
C8 | 0.0261 (8) | 0.0147 (7) | 0.0185 (7) | 0.0000 (6) | 0.0104 (7) | 0.0001 (6) |
C9 | 0.0325 (10) | 0.0221 (8) | 0.0232 (8) | −0.0002 (7) | 0.0088 (7) | −0.0002 (6) |
C10 | 0.0395 (10) | 0.0268 (9) | 0.0174 (8) | −0.0027 (7) | 0.0127 (8) | −0.0005 (6) |
C11 | 0.0360 (10) | 0.0255 (8) | 0.0261 (9) | −0.0049 (7) | 0.0184 (8) | −0.0036 (7) |
C12 | 0.0246 (9) | 0.0254 (8) | 0.0210 (8) | −0.0029 (7) | 0.0101 (7) | −0.0038 (6) |
C13 | 0.0350 (11) | 0.0513 (12) | 0.0294 (10) | 0.0004 (9) | 0.0047 (9) | 0.0011 (9) |
C14 | 0.0483 (13) | 0.0514 (12) | 0.0367 (11) | −0.0127 (10) | 0.0301 (10) | −0.0116 (9) |
C15 | 0.0458 (11) | 0.0221 (8) | 0.0234 (8) | −0.0009 (8) | 0.0145 (8) | 0.0052 (7) |
C16 | 0.0773 (17) | 0.0288 (10) | 0.0509 (13) | −0.0146 (10) | 0.0429 (13) | −0.0012 (9) |
C17 | 0.0218 (8) | 0.0189 (7) | 0.0255 (8) | 0.0010 (6) | 0.0093 (7) | −0.0014 (6) |
N3 | 0.0214 (9) | 0.0169 (8) | 0.0247 (9) | 0.0047 (6) | 0.0092 (7) | 0.0066 (7) |
C18 | 0.0249 (10) | 0.0268 (10) | 0.0260 (10) | 0.0008 (8) | 0.0109 (8) | 0.0009 (8) |
C19 | 0.0286 (13) | 0.0305 (17) | 0.0260 (13) | 0.0004 (12) | 0.0085 (10) | 0.0001 (10) |
O1 | 0.0237 (8) | 0.0311 (8) | 0.0342 (8) | 0.0008 (6) | 0.0130 (7) | −0.0026 (6) |
C20 | 0.0276 (11) | 0.0183 (9) | 0.0487 (13) | 0.0081 (8) | 0.0178 (10) | 0.0071 (9) |
C21 | 0.0336 (14) | 0.0276 (11) | 0.0711 (18) | 0.0065 (10) | 0.0207 (14) | −0.0135 (12) |
O2 | 0.0628 (13) | 0.0487 (10) | 0.0471 (10) | 0.0246 (9) | 0.0218 (10) | −0.0080 (8) |
N3A | 0.025 (5) | 0.018 (5) | 0.035 (5) | −0.001 (4) | 0.006 (4) | −0.002 (4) |
C18A | 0.013 (4) | 0.020 (5) | 0.027 (5) | 0.003 (4) | 0.002 (4) | −0.004 (4) |
C19A | 0.019 (6) | 0.021 (7) | 0.033 (7) | −0.005 (5) | 0.008 (5) | −0.014 (5) |
O1A | 0.026 (6) | 0.069 (8) | 0.053 (7) | 0.011 (6) | 0.011 (5) | 0.021 (6) |
C20A | 0.046 (6) | 0.042 (5) | 0.054 (6) | 0.008 (5) | 0.010 (5) | −0.012 (5) |
C21A | 0.060 (8) | 0.047 (7) | 0.077 (8) | 0.007 (6) | 0.013 (7) | 0.004 (6) |
O2A | 0.077 (10) | 0.096 (11) | 0.080 (8) | 0.027 (8) | 0.023 (7) | 0.017 (7) |
C22 | 0.0326 (9) | 0.0182 (7) | 0.0236 (8) | −0.0005 (7) | 0.0174 (7) | −0.0018 (6) |
C23 | 0.0374 (10) | 0.0228 (8) | 0.0195 (8) | 0.0007 (7) | 0.0126 (7) | −0.0035 (6) |
C24 | 0.0243 (8) | 0.0183 (7) | 0.0173 (7) | 0.0015 (6) | 0.0066 (7) | 0.0012 (6) |
C25 | 0.0284 (9) | 0.0214 (8) | 0.0227 (8) | −0.0037 (7) | 0.0088 (7) | −0.0026 (6) |
C26 | 0.0259 (9) | 0.0329 (9) | 0.0197 (8) | −0.0065 (7) | 0.0077 (7) | −0.0001 (7) |
C27 | 0.0341 (10) | 0.0245 (8) | 0.0195 (8) | −0.0002 (7) | 0.0094 (7) | 0.0060 (6) |
C28 | 0.0398 (11) | 0.0338 (10) | 0.0249 (9) | −0.0032 (8) | 0.0153 (8) | 0.0042 (7) |
C29 | 0.0306 (9) | 0.0212 (8) | 0.0230 (8) | 0.0032 (7) | 0.0118 (7) | −0.0040 (6) |
C30 | 0.0323 (10) | 0.0331 (9) | 0.0348 (10) | 0.0130 (8) | 0.0128 (8) | −0.0021 (8) |
O3—C26 | 1.436 (2) | C18—C19 | 1.502 (4) |
O3—H3 | 0.867 (16) | C18—H18A | 0.9900 |
O4—C28 | 1.415 (2) | C18—H18B | 0.9900 |
O4—H4 | 0.863 (16) | C19—O1 | 1.427 (3) |
N1—C8 | 1.3775 (19) | C19—H19A | 0.9900 |
N1—C7 | 1.456 (2) | C19—H19B | 0.9900 |
N1—H1N | 0.89 (2) | O1—H1 | 0.873 (16) |
N2—C8 | 1.343 (2) | C20—C21 | 1.512 (3) |
N2—C9 | 1.349 (2) | C20—H20A | 0.9900 |
N4—C27 | 1.4595 (19) | C20—H20B | 0.9900 |
N4—C25 | 1.466 (2) | C21—O2 | 1.404 (3) |
N4—C24 | 1.467 (2) | C21—H21A | 0.9900 |
C1—C2 | 1.401 (2) | C21—H21B | 0.9900 |
C1—C6 | 1.407 (2) | O2—H2 | 0.865 (17) |
C1—C7 | 1.513 (2) | N3A—C18A | 1.461 (9) |
C2—C3 | 1.407 (2) | N3A—C20A | 1.466 (9) |
C2—C15 | 1.515 (2) | C18A—C19A | 1.507 (10) |
C3—C4 | 1.397 (2) | C18A—H18C | 0.9900 |
C3—C17 | 1.518 (2) | C18A—H18D | 0.9900 |
C4—C5 | 1.412 (2) | C19A—O1A | 1.433 (10) |
C4—C22 | 1.523 (2) | C19A—H19C | 0.9900 |
C5—C6 | 1.4010 (19) | C19A—H19D | 0.9900 |
C5—C24 | 1.521 (2) | O1A—H1A | 0.8400 |
C6—C29 | 1.518 (2) | C20A—C21A | 1.511 (10) |
C7—H7A | 0.9900 | C20A—H20C | 0.9900 |
C7—H7B | 0.9900 | C20A—H20D | 0.9900 |
C8—C12 | 1.393 (2) | C21A—O2A | 1.411 (10) |
C9—C10 | 1.384 (2) | C21A—H21C | 0.9900 |
C9—C13 | 1.500 (3) | C21A—H21D | 0.9900 |
C10—C11 | 1.392 (3) | O2A—H2A | 0.8400 |
C10—H10 | 0.9500 | C22—C23 | 1.526 (2) |
C11—C12 | 1.381 (2) | C22—H22A | 0.9900 |
C11—C14 | 1.509 (2) | C22—H22B | 0.9900 |
C12—H12 | 0.9500 | C23—H23A | 0.9800 |
C13—H13A | 0.9800 | C23—H23B | 0.9800 |
C13—H13B | 0.9800 | C23—H23C | 0.9800 |
C13—H13C | 0.9800 | C24—H24A | 0.9900 |
C14—H14A | 0.9800 | C24—H24B | 0.9900 |
C14—H14B | 0.9800 | C25—C26 | 1.507 (2) |
C14—H14C | 0.9800 | C25—H25A | 0.9900 |
C15—C16 | 1.534 (3) | C25—H25B | 0.9900 |
C15—H15A | 0.9900 | C26—H26A | 0.9900 |
C15—H15B | 0.9900 | C26—H26B | 0.9900 |
C16—H16A | 0.9800 | C27—C28 | 1.515 (2) |
C16—H16B | 0.9800 | C27—H27A | 0.9900 |
C16—H16C | 0.9800 | C27—H27B | 0.9900 |
C17—N3 | 1.460 (2) | C28—H28A | 0.9900 |
C17—N3A | 1.468 (8) | C28—H28B | 0.9900 |
C17—H17A | 0.9900 | C29—C30 | 1.526 (2) |
C17—H17B | 0.9900 | C29—H29A | 0.9900 |
C17—H17C | 0.9900 | C29—H29B | 0.9900 |
C17—H17D | 0.9900 | C30—H30A | 0.9800 |
N3—C20 | 1.459 (2) | C30—H30B | 0.9800 |
N3—C18 | 1.469 (2) | C30—H30C | 0.9800 |
C26—O3—H3 | 106.9 (18) | H19A—C19—H19B | 108.2 |
C28—O4—H4 | 102.7 (19) | C19—O1—H1 | 106.4 (17) |
C8—N1—C7 | 121.81 (13) | N3—C20—C21 | 117.25 (18) |
C8—N1—H1N | 111.1 (12) | N3—C20—H20A | 108.0 |
C7—N1—H1N | 117.4 (12) | C21—C20—H20A | 108.0 |
C8—N2—C9 | 118.51 (14) | N3—C20—H20B | 108.0 |
C27—N4—C25 | 113.46 (12) | C21—C20—H20B | 108.0 |
C27—N4—C24 | 111.47 (13) | H20A—C20—H20B | 107.2 |
C25—N4—C24 | 113.60 (12) | O2—C21—C20 | 113.70 (19) |
C2—C1—C6 | 120.77 (13) | O2—C21—H21A | 108.8 |
C2—C1—C7 | 118.81 (13) | C20—C21—H21A | 108.8 |
C6—C1—C7 | 120.24 (13) | O2—C21—H21B | 108.8 |
C1—C2—C3 | 119.50 (13) | C20—C21—H21B | 108.8 |
C1—C2—C15 | 120.56 (13) | H21A—C21—H21B | 107.7 |
C3—C2—C15 | 119.94 (14) | C21—O2—H2 | 104 (2) |
C4—C3—C2 | 120.16 (13) | C18A—N3A—C20A | 118.3 (9) |
C4—C3—C17 | 120.50 (13) | C18A—N3A—C17 | 118.2 (8) |
C2—C3—C17 | 119.29 (13) | C20A—N3A—C17 | 110.8 (8) |
C3—C4—C5 | 119.95 (13) | N3A—C18A—C19A | 111.7 (11) |
C3—C4—C22 | 120.61 (13) | N3A—C18A—H18C | 109.3 |
C5—C4—C22 | 119.40 (13) | C19A—C18A—H18C | 109.3 |
C6—C5—C4 | 120.22 (13) | N3A—C18A—H18D | 109.3 |
C6—C5—C24 | 121.63 (13) | C19A—C18A—H18D | 109.3 |
C4—C5—C24 | 118.13 (12) | H18C—C18A—H18D | 107.9 |
C5—C6—C1 | 119.28 (13) | O1A—C19A—C18A | 107.1 (10) |
C5—C6—C29 | 121.33 (13) | O1A—C19A—H19C | 110.3 |
C1—C6—C29 | 119.37 (12) | C18A—C19A—H19C | 110.3 |
N1—C7—C1 | 108.68 (12) | O1A—C19A—H19D | 110.3 |
N1—C7—H7A | 110.0 | C18A—C19A—H19D | 110.3 |
C1—C7—H7A | 110.0 | H19C—C19A—H19D | 108.5 |
N1—C7—H7B | 110.0 | C19A—O1A—H1A | 109.5 |
C1—C7—H7B | 110.0 | N3A—C20A—C21A | 111.2 (12) |
H7A—C7—H7B | 108.3 | N3A—C20A—H20C | 109.4 |
N2—C8—N1 | 115.51 (13) | C21A—C20A—H20C | 109.4 |
N2—C8—C12 | 122.62 (14) | N3A—C20A—H20D | 109.4 |
N1—C8—C12 | 121.84 (15) | C21A—C20A—H20D | 109.4 |
N2—C9—C10 | 121.94 (16) | H20C—C20A—H20D | 108.0 |
N2—C9—C13 | 115.99 (15) | O2A—C21A—C20A | 112.8 (12) |
C10—C9—C13 | 122.07 (16) | O2A—C21A—H21C | 109.0 |
C9—C10—C11 | 119.35 (15) | C20A—C21A—H21C | 109.0 |
C9—C10—H10 | 120.3 | O2A—C21A—H21D | 109.0 |
C11—C10—H10 | 120.3 | C20A—C21A—H21D | 109.0 |
C12—C11—C10 | 118.89 (15) | H21C—C21A—H21D | 107.8 |
C12—C11—C14 | 120.34 (17) | C21A—O2A—H2A | 109.5 |
C10—C11—C14 | 120.76 (15) | C4—C22—C23 | 111.64 (13) |
C11—C12—C8 | 118.68 (16) | C4—C22—H22A | 109.3 |
C11—C12—H12 | 120.7 | C23—C22—H22A | 109.3 |
C8—C12—H12 | 120.7 | C4—C22—H22B | 109.3 |
C9—C13—H13A | 109.5 | C23—C22—H22B | 109.3 |
C9—C13—H13B | 109.5 | H22A—C22—H22B | 108.0 |
H13A—C13—H13B | 109.5 | C22—C23—H23A | 109.5 |
C9—C13—H13C | 109.5 | C22—C23—H23B | 109.5 |
H13A—C13—H13C | 109.5 | H23A—C23—H23B | 109.5 |
H13B—C13—H13C | 109.5 | C22—C23—H23C | 109.5 |
C11—C14—H14A | 109.5 | H23A—C23—H23C | 109.5 |
C11—C14—H14B | 109.5 | H23B—C23—H23C | 109.5 |
H14A—C14—H14B | 109.5 | N4—C24—C5 | 112.30 (13) |
C11—C14—H14C | 109.5 | N4—C24—H24A | 109.1 |
H14A—C14—H14C | 109.5 | C5—C24—H24A | 109.1 |
H14B—C14—H14C | 109.5 | N4—C24—H24B | 109.1 |
C2—C15—C16 | 112.70 (16) | C5—C24—H24B | 109.1 |
C2—C15—H15A | 109.1 | H24A—C24—H24B | 107.9 |
C16—C15—H15A | 109.1 | N4—C25—C26 | 113.08 (14) |
C2—C15—H15B | 109.1 | N4—C25—H25A | 109.0 |
C16—C15—H15B | 109.1 | C26—C25—H25A | 109.0 |
H15A—C15—H15B | 107.8 | N4—C25—H25B | 109.0 |
C15—C16—H16A | 109.5 | C26—C25—H25B | 109.0 |
C15—C16—H16B | 109.5 | H25A—C25—H25B | 107.8 |
H16A—C16—H16B | 109.5 | O3—C26—C25 | 108.92 (13) |
C15—C16—H16C | 109.5 | O3—C26—H26A | 109.9 |
H16A—C16—H16C | 109.5 | C25—C26—H26A | 109.9 |
H16B—C16—H16C | 109.5 | O3—C26—H26B | 109.9 |
N3—C17—C3 | 112.70 (14) | C25—C26—H26B | 109.9 |
N3A—C17—C3 | 106.9 (5) | H26A—C26—H26B | 108.3 |
N3—C17—H17A | 109.1 | N4—C27—C28 | 111.58 (14) |
C3—C17—H17A | 109.1 | N4—C27—H27A | 109.3 |
N3—C17—H17B | 109.1 | C28—C27—H27A | 109.3 |
C3—C17—H17B | 109.1 | N4—C27—H27B | 109.3 |
H17A—C17—H17B | 107.8 | C28—C27—H27B | 109.3 |
N3A—C17—H17C | 110.3 | H27A—C27—H27B | 108.0 |
C3—C17—H17C | 110.3 | O4—C28—C27 | 112.57 (14) |
N3A—C17—H17D | 110.3 | O4—C28—H28A | 109.1 |
C3—C17—H17D | 110.3 | C27—C28—H28A | 109.1 |
H17C—C17—H17D | 108.6 | O4—C28—H28B | 109.1 |
C20—N3—C17 | 112.80 (16) | C27—C28—H28B | 109.1 |
C20—N3—C18 | 114.82 (16) | H28A—C28—H28B | 107.8 |
C17—N3—C18 | 114.22 (15) | C6—C29—C30 | 112.38 (14) |
N3—C18—C19 | 111.71 (17) | C6—C29—H29A | 109.1 |
N3—C18—H18A | 109.3 | C30—C29—H29A | 109.1 |
C19—C18—H18A | 109.3 | C6—C29—H29B | 109.1 |
N3—C18—H18B | 109.3 | C30—C29—H29B | 109.1 |
C19—C18—H18B | 109.3 | H29A—C29—H29B | 107.9 |
H18A—C18—H18B | 107.9 | C29—C30—H30A | 109.5 |
O1—C19—C18 | 109.9 (2) | C29—C30—H30B | 109.5 |
O1—C19—H19A | 109.7 | H30A—C30—H30B | 109.5 |
C18—C19—H19A | 109.7 | C29—C30—H30C | 109.5 |
O1—C19—H19B | 109.7 | H30A—C30—H30C | 109.5 |
C18—C19—H19B | 109.7 | H30B—C30—H30C | 109.5 |
C6—C1—C2—C3 | 3.9 (2) | N2—C8—C12—C11 | 1.1 (2) |
C7—C1—C2—C3 | 179.11 (14) | N1—C8—C12—C11 | 179.13 (15) |
C6—C1—C2—C15 | −176.63 (15) | C1—C2—C15—C16 | −88.89 (19) |
C7—C1—C2—C15 | −1.5 (2) | C3—C2—C15—C16 | 90.55 (19) |
C1—C2—C3—C4 | −2.3 (2) | C4—C3—C17—N3 | −99.98 (17) |
C15—C2—C3—C4 | 178.26 (15) | C2—C3—C17—N3 | 77.67 (18) |
C1—C2—C3—C17 | −179.95 (14) | C4—C3—C17—N3A | −77.6 (6) |
C15—C2—C3—C17 | 0.6 (2) | C2—C3—C17—N3A | 100.1 (6) |
C2—C3—C4—C5 | −0.8 (2) | C3—C17—N3—C20 | −167.61 (15) |
C17—C3—C4—C5 | 176.79 (14) | C3—C17—N3—C18 | 58.88 (19) |
C2—C3—C4—C22 | 176.88 (14) | C20—N3—C18—C19 | 83.7 (3) |
C17—C3—C4—C22 | −5.5 (2) | C17—N3—C18—C19 | −143.8 (2) |
C3—C4—C5—C6 | 2.4 (2) | N3—C18—C19—O1 | 173.3 (2) |
C22—C4—C5—C6 | −175.35 (14) | C17—N3—C20—C21 | −52.4 (2) |
C3—C4—C5—C24 | −176.09 (14) | C18—N3—C20—C21 | 80.8 (2) |
C22—C4—C5—C24 | 6.2 (2) | N3—C20—C21—O2 | −56.8 (3) |
C4—C5—C6—C1 | −0.8 (2) | C3—C17—N3A—C18A | −61.6 (11) |
C24—C5—C6—C1 | 177.64 (14) | C3—C17—N3A—C20A | 157.2 (8) |
C4—C5—C6—C29 | 177.43 (14) | C20A—N3A—C18A—C19A | −58.0 (19) |
C24—C5—C6—C29 | −4.1 (2) | C17—N3A—C18A—C19A | 163.7 (14) |
C2—C1—C6—C5 | −2.4 (2) | N3A—C18A—C19A—O1A | −45 (3) |
C7—C1—C6—C5 | −177.49 (14) | C18A—N3A—C20A—C21A | −77.9 (15) |
C2—C1—C6—C29 | 179.35 (14) | C17—N3A—C20A—C21A | 63.2 (15) |
C7—C1—C6—C29 | 4.2 (2) | N3A—C20A—C21A—O2A | 70 (2) |
C8—N1—C7—C1 | 165.06 (14) | C3—C4—C22—C23 | −85.93 (18) |
C2—C1—C7—N1 | −85.21 (17) | C5—C4—C22—C23 | 91.81 (17) |
C6—C1—C7—N1 | 90.00 (17) | C27—N4—C24—C5 | −162.08 (12) |
C9—N2—C8—N1 | −178.75 (14) | C25—N4—C24—C5 | 68.22 (16) |
C9—N2—C8—C12 | −0.6 (2) | C6—C5—C24—N4 | −108.97 (16) |
C7—N1—C8—N2 | −161.06 (14) | C4—C5—C24—N4 | 69.50 (18) |
C7—N1—C8—C12 | 20.8 (2) | C27—N4—C25—C26 | 132.61 (15) |
C8—N2—C9—C10 | −0.4 (2) | C24—N4—C25—C26 | −98.70 (15) |
C8—N2—C9—C13 | 179.58 (15) | N4—C25—C26—O3 | −63.25 (17) |
N2—C9—C10—C11 | 0.9 (2) | C25—N4—C27—C28 | −66.62 (18) |
C13—C9—C10—C11 | −179.07 (17) | C24—N4—C27—C28 | 163.61 (13) |
C9—C10—C11—C12 | −0.4 (2) | N4—C27—C28—O4 | −50.53 (19) |
C9—C10—C11—C14 | 179.00 (16) | C5—C6—C29—C30 | −88.66 (18) |
C10—C11—C12—C8 | −0.6 (2) | C1—C6—C29—C30 | 89.57 (18) |
C14—C11—C12—C8 | −179.97 (15) |
D—H···A | D—H | H···A | D···A | D—H···A |
O2A—H2A···O4i | 0.84 | 1.99 | 2.763 (18) | 152 |
O1A—H1A···N2ii | 0.84 | 1.99 | 2.832 (12) | 178 |
C18A—H18D···O2A | 0.99 | 2.46 | 3.08 (2) | 120 |
O2—H2···O3i | 0.87 (2) | 1.99 (2) | 2.828 (2) | 162 (3) |
O1—H1···N2ii | 0.87 (2) | 1.89 (2) | 2.7449 (19) | 167 (3) |
N1—H1N···O1ii | 0.89 (2) | 2.19 (2) | 3.014 (2) | 152.0 (17) |
C22—H22A···N4 | 0.99 | 2.40 | 3.152 (2) | 132 |
C18—H18A···O2 | 0.99 | 2.39 | 3.106 (3) | 128 |
C15—H15A···N3 | 0.99 | 2.54 | 3.282 (3) | 131 |
C13—H13A···O2Aiii | 0.98 | 2.33 | 3.220 (14) | 151 |
C10—H10···O4iv | 0.95 | 2.45 | 3.365 (2) | 161 |
O4—H4···O3 | 0.86 (2) | 2.12 (2) | 2.9200 (18) | 155 (3) |
O3—H3···O1A | 0.87 (2) | 1.93 (2) | 2.727 (13) | 152 (3) |
O3—H3···O1 | 0.87 (2) | 1.86 (2) | 2.7156 (19) | 172 (3) |
Symmetry codes: (i) −x, y+1/2, −z+1/2; (ii) −x, −y+1, −z; (iii) −x, y−1/2, −z−1/2; (iv) x, y, z−1. |
Funding information
Open access funding by the Publication Fund of the Technische Universität Bergakademie Freiberg is gratefully acknowledged.
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