research communications
tert-butyl-4-hydroxyphenyl)methanediyl]bis(3-hydroxy-5,5-dimethylcyclohex-2-en-1-one)
and Hirshfeld surface analysis of 2,2′-[(3,5-di-a"Composite Materials" Scientific Research Center, Azerbaijan State Economic University (UNEC), H. Aliyev str. 135, Az 1063, Baku, Azerbaijan, bDepartment of Chemistry, Baku State University, Z. Khalilov str. 23, Az, 1148, Baku, Azerbaijan, cPeoples' Friendship University of Russia (RUDN University), Miklukho-Maklay St.6, Moscow, 117198, Russian Federation, dN. D. Zelinsky Institute of Organic Chemistry RAS, Leninsky Prosp. 47, Moscow, 119991, Russian Federation, eDepartment of Physics, Faculty of Sciences, Erciyes University, 38039 Kayseri, Türkiye, and fDepartment of Chemistry, M.M.A.M.C (Tribhuvan University) Biratnagar, Nepal
*Correspondence e-mail: ajaya.bhattarai@mmamc.tu.edu.np
In the title compound, C31H44O5, molecules are connected by O—H⋯O and C—H⋯O hydrogen bonds, forming hydrogen-bonded zigzag chains running along the b axis and parallel to the (001) plane. The molecular packing is stabilized by van der Waals interactions between these chains along the a and c axes. The intermolecular interactions in the were quantified and analysed using Hirshfeld surface analysis.
Keywords: crystal structure; hydrogen bonds; hydrogen-bonded zigzag chains; van der Waals interactions; 1,8-dioxo-octahydroxanthene; Hirshfeld surface analysis.
CCDC reference: 2254247
1. Chemical context
The various carbon–carbon bond-formation techniques play important roles in organic chemistry (Celik et al., 2023; Chalkha et al., 2023; Tapera et al., 2022). Xanthene derivatives have broad applications in medicine as a result of their anti-inflammatory, antibacterial, antiviral, antifungal, anti-depressant, antiplasmodial and anti-malarial activity (Maia et al., 2021). They are a special class of oxygen-incorporating tricyclic systems. The xanthene moiety is also found in various natural compounds and has a wide spectrum of therapeutic and pharmacological properties. Aside from medicinal applications, have been used for diagnostic and imaging applications (Khan & Sekar, 2022; Majumdar et al., 2022; Lakhrissi et al., 2022).
Thus, in the framework of our ongoing structural studies (Zubkov et al., 2018; Gurbanov et al., 2020; Maharramov et al., 2021, 2022), we report the and Hirshfeld surface analysis of the title compound, 2,2′-[(3,5-di-tert-butyl-4-hydroxyphenyl)methanediyl]bis(3-hydroxy-5,5-dimethylcyclohex-2-en-1-one).
2. Structural commentary
As seen in Fig. 1, each of the cyclohexenone rings (C2–C7 and C10–C15) of the title compound adopts an The puckering parameters (Cremer & Pople, 1975) are QT = 0.5027 (12) Å, θ = 63.26 (14)°, φ = 179.78 (16)° for the C2–C7 ring, and QT = 0.4920 (11) Å, θ = 67.89 (13)°, φ = 167.63 (14)° for the C10–C15 ring. The mean planes [maximum deviations are 0.353 (1) Å for C5 and 0.332 (1) Å for C13] of the cyclohexane rings C2–C7 and C10–C15 subtend a dihedral angle of 39.59 (5)°, and they form dihedral angles of 56.25 (5) and 50.23 (5)°, respectively, with the benzene ring (C18–C23) of the 3,5-di-tert-butyl-4-hydroxyphenyl moiety. The bond lengths and angles in the title compound are within normal ranges. The orientation of the hydroxy and carbonyl O atoms permits the formation of two intramolecular O—H⋯O hydrogen bonds as they face one another (Fig. 1, Table 1).
3. Supramolecular features and Hirshfeld surface analysis
In the crystal, O—H⋯O and C—H⋯O hydrogen bonds (Table 1) link the molecules, forming zigzag chains running along the [010] direction and parallel to the (001) plane (Figs. 2 and 3). The molecular packing is stabilized by van der Waals interactions between these chains along the a and c axes.
To quantify the intermolecular interactions, a Hirshfeld surface analysis was performed and CrystalExplorer17 (Turner et al., 2017) was used to obtain the accompanying two-dimensional fingerprint plots. Fig. 4 shows the Hirshfeld surface mapped onto dnorm using a common surface resolution and a constant color scale of −0.4467 (red) to 1.6498 (blue) a.u. On the Hirshfeld surface, shorter and longer contacts are indicated by red and blue spots, respectively, and contacts with lengths about equal to the sum of the van der Waals radii are indicated by white spots. The O—H⋯O and C—H⋯O interactions are represented by the two most significant red spots on the dnorm surface (Tables 1 and 2).
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Fig. 5 depicts the two-dimensional fingerprint plots of (di, de) points from all the contacts contributing to the Hirshfeld surface analysis in normal mode for all atoms. The most important intermolecular interactions are H⋯H contacts, contributing 76.8% to the overall crystal packing. Other interactions and their respective contributions are O⋯H/H⋯O (15.2%), C⋯H/H⋯C (6.9%) and O⋯O (1.0%). The Hirshfeld surface study verifies the significance of H-atom interactions in the packing formation. The significant frequency of H⋯H and O⋯H/H⋯O interactions implies that van der Waals interactions and hydrogen bonding are important in crystal packing (Hathwar et al., 2015).
4. Database survey
The ten most similar compounds found in a search of the Cambridge Structural Database (CSD, Version 5.42, update of September 2021; Groom et al., 2016) for the 2,2′-(ethane-1,1-diyl)bis(3-hydroxy-5,5-dimethylcyclohex-2-en-1-one) moiety are 2,2′-[(4-ethoxyphenyl)methylene]bis(3-hydroxy-5,5-dimethylcyclohex-2-en-1- one) (I; Sureshbabu & Sughanya, 2012), 2,2′-[(3-bromo-4-hydroxy-5-methoxyphenyl)methylidene]bis(3-hydroxy-5,5-dimethylcyclohex-2-en-1-one) (II; Sughanya & Sureshbabu, 2012), 2,2′-[(1E)-3-phenylprop-2-ene-1,1-diyl]bis(3-hydroxy-5,5-dimethylcyclohex-2-en-1-one) (III; Zhu et al., 2011), (E)-2,2′-[3-(4-chlorophenyl)prop-2-ene-1,1-diyl]bis(3-hydroxy-5,5-dimethylcyclohex-2-en-1-one) (IV; Cha et al., 2013a), (E)-2,2′-[3-(4-fluorophenyl)prop-2-ene-1,1-diyl]bis(3-hydroxy-5,5-dimethylcyclohex-2-en-1-one) (V; Cha et al., 2013b), (E)-2,2′-[3-(2-nitrophenyl)prop-2-ene-1,1-diyl]bis(3-hydroxy-5,5-dimethylcyclohex- 2-en-1-one) (VI; Cha et al., 2011), 2,2′-[(E)-3-(4-nitrophenyl)prop-2-ene-1,1-diyl]bis(3-hydroxy-5,5-dimethylcyclohex-2-en-1-one) (VII; Cha et al., 2012), bis(2- hydroxy-4,4-dimethyl-6-oxo-1-cyclohexenyl)phenylmethane (VIII; Bolte et al., 1997a), 2,2′-[(2-nitrophenyl)methylene]bis(3-hydroxy-5,5-dimethylcyclohex-2-enone) (IX; Steiger et al., 2020) and 2,2′-[(3-hydroxyphenyl)methylene]bis(3-hydroxy-5,5-dimethyl-2-cyclohexen-1-one) (X; Bolte et al., 2001b).
In I, II, III, IV, VIII, IX and X, the two cyclohexane rings adopt an while in VI and VII they exhibit a half-chair conformation. In all of these crystals, molecules are connected via O—H⋯O hydrogen bonds. In X, there are also O—H⋯O hydrogen bonds involving the water molecules. In III, IV, V, VI, VII and IX, C—H⋯O hydrogen bonds also contribute to the cohesion of the crystal structure.
5. Synthesis and crystallization
To a solution of 3,5-di-tert-butyl-4-hydroxybenzaldehyde (1 g, 4.3 mmol) and 5,5-dimethylcyclohexane-1,3-dione (1.2 g, 8.6 mmol) in ethanol (15 mL), piperidine (2–3 drops) was added and the mixture was refluxed for 3 h. Then 10 mL of ethanol was removed from the reaction mixture, which was left overnight. The precipitated crystals were separated by filtration and recrystallized from an ethanol/water (4:1) solution (yield 65%; m.p. 465–466 K).
1H NMR (300 MHz, CDCl3, ppm): 1.05 (s, 6H, 2CH3), 1.08 (s, 6H, 2CH3), 1.41 (s, 18H, 6CH3), 2.05–2.35 (m, 8H, 4CH2), 5.39 (s, 1H, CH), 5.69 (s, 1H, OH), 6.65 (s, 2H, arom.), 11.21 (s, 2H, 2OH); 13C NMR (75 MHz, CDCl3, ppm): 26.4, 28.7, 30.8, 31.7, 32.6, 36.5, 45.3, 51.8, 111.6, 122.9, 13.8, 136.8, 153.2, 176.4, 202.3.
6. Refinement
Crystal data, data collection and structure . All C-bound H atoms were placed at calculated positions and refined using a riding model, with C—H = 0.95–1.00 Å, and with Uiso(H) = 1.2 or 1.5Ueq(C). The O-bound H atoms were located in a difference-Fourier map and were freely refined.
details are summarized in Table 3Supporting information
CCDC reference: 2254247
https://doi.org/10.1107/S2056989023003171/zn2027sup1.cif
contains datablock I. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S2056989023003171/zn2027Isup2.hkl
Supporting information file. DOI: https://doi.org/10.1107/S2056989023003171/zn2027Isup3.cml
Data collection: CrysAlis PRO 1.171.42.72a (Rigaku OD, 2022); cell
CrysAlis PRO 1.171.42.72a (Rigaku OD, 2022); data reduction: CrysAlis PRO 1.171.42.72a (Rigaku OD, 2022); program(s) used to solve structure: SHELXT2014/5 (Sheldrick, 2015a); program(s) used to refine structure: SHELXL2018/3 (Sheldrick, 2015b); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012); software used to prepare material for publication: PLATON (Spek, 2020).C31H44O5 | F(000) = 1080 |
Mr = 496.66 | Dx = 1.189 Mg m−3 |
Monoclinic, P21/c | Cu Kα radiation, λ = 1.54184 Å |
a = 12.40591 (9) Å | Cell parameters from 41183 reflections |
b = 10.98934 (10) Å | θ = 3.6–77.8° |
c = 20.58063 (17) Å | µ = 0.63 mm−1 |
β = 98.4293 (7)° | T = 100 K |
V = 2775.50 (4) Å3 | Prism, colourless |
Z = 4 | 0.33 × 0.21 × 0.18 mm |
XtaLAB Synergy, Dualflex, HyPix diffractometer | 5540 reflections with I > 2σ(I) |
Radiation source: micro-focus sealed X-ray tube | Rint = 0.047 |
φ and ω scans | θmax = 77.9°, θmin = 3.6° |
Absorption correction: gaussian (CrysAlisPro; Rigaku OD, 2022) | h = −13→15 |
Tmin = 0.362, Tmax = 1.000 | k = −13→13 |
61789 measured reflections | l = −26→26 |
5870 independent reflections |
Refinement on F2 | Primary atom site location: difference Fourier map |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.039 | Hydrogen site location: mixed |
wR(F2) = 0.104 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.03 | w = 1/[σ2(Fo2) + (0.0581P)2 + 0.9674P] where P = (Fo2 + 2Fc2)/3 |
5870 reflections | (Δ/σ)max = 0.001 |
347 parameters | Δρmax = 0.27 e Å−3 |
0 restraints | Δρmin = −0.26 e Å−3 |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
x | y | z | Uiso*/Ueq | ||
O1 | 0.67352 (6) | 0.68092 (7) | 0.79581 (4) | 0.02223 (17) | |
H1O | 0.7151 (15) | 0.6706 (16) | 0.7621 (9) | 0.046 (5)* | |
O2 | 0.39003 (6) | 0.48506 (8) | 0.65828 (4) | 0.02641 (18) | |
O3 | 0.47791 (6) | 0.57142 (7) | 0.55974 (4) | 0.02175 (17) | |
H3O | 0.4532 (15) | 0.5356 (17) | 0.5969 (9) | 0.049 (5)* | |
O4 | 0.79022 (6) | 0.69306 (7) | 0.69970 (3) | 0.01951 (16) | |
O5 | 0.99582 (6) | 0.26695 (8) | 0.81386 (4) | 0.02279 (17) | |
H5O | 1.0464 (15) | 0.2572 (16) | 0.7907 (9) | 0.041 (4)* | |
C1 | 0.61903 (8) | 0.51072 (9) | 0.68241 (5) | 0.0160 (2) | |
H1 | 0.5758 | 0.4455 | 0.6566 | 0.019* | |
C2 | 0.54278 (8) | 0.56043 (9) | 0.72776 (5) | 0.0171 (2) | |
C3 | 0.57463 (8) | 0.63356 (9) | 0.78073 (5) | 0.0186 (2) | |
C4 | 0.50033 (9) | 0.66692 (11) | 0.82932 (6) | 0.0245 (2) | |
H4A | 0.4701 | 0.7491 | 0.8186 | 0.029* | |
H4B | 0.5435 | 0.6707 | 0.8737 | 0.029* | |
C5 | 0.40583 (9) | 0.57748 (10) | 0.83053 (5) | 0.0217 (2) | |
C6 | 0.35058 (9) | 0.56319 (12) | 0.75965 (6) | 0.0265 (2) | |
H6A | 0.2947 | 0.4985 | 0.7579 | 0.032* | |
H6B | 0.3127 | 0.6401 | 0.7454 | 0.032* | |
C7 | 0.42799 (9) | 0.53188 (10) | 0.71194 (5) | 0.0211 (2) | |
C8 | 0.32572 (10) | 0.62886 (12) | 0.87359 (6) | 0.0307 (3) | |
H8A | 0.3632 | 0.6401 | 0.9185 | 0.046* | |
H8B | 0.2650 | 0.5719 | 0.8739 | 0.046* | |
H8C | 0.2977 | 0.7073 | 0.8559 | 0.046* | |
C9 | 0.44652 (10) | 0.45389 (12) | 0.85835 (6) | 0.0304 (3) | |
H9A | 0.4965 | 0.4189 | 0.8307 | 0.046* | |
H9B | 0.3844 | 0.3991 | 0.8590 | 0.046* | |
H9C | 0.4848 | 0.4646 | 0.9031 | 0.046* | |
C10 | 0.64598 (8) | 0.60075 (9) | 0.63062 (5) | 0.0162 (2) | |
C11 | 0.57732 (8) | 0.61877 (9) | 0.57293 (5) | 0.0176 (2) | |
C12 | 0.60567 (8) | 0.69745 (10) | 0.51805 (5) | 0.0197 (2) | |
H12A | 0.5757 | 0.7800 | 0.5224 | 0.024* | |
H12B | 0.5709 | 0.6634 | 0.4756 | 0.024* | |
C13 | 0.72887 (8) | 0.70697 (10) | 0.51767 (5) | 0.0192 (2) | |
C14 | 0.78192 (8) | 0.74319 (10) | 0.58701 (5) | 0.0193 (2) | |
H14A | 0.8614 | 0.7292 | 0.5905 | 0.023* | |
H14B | 0.7707 | 0.8315 | 0.5926 | 0.023* | |
C15 | 0.74074 (8) | 0.67709 (9) | 0.64281 (5) | 0.0169 (2) | |
C16 | 0.75463 (10) | 0.80530 (11) | 0.46958 (6) | 0.0266 (2) | |
H16A | 0.7221 | 0.8826 | 0.4804 | 0.040* | |
H16B | 0.7244 | 0.7814 | 0.4247 | 0.040* | |
H16C | 0.8338 | 0.8148 | 0.4728 | 0.040* | |
C17 | 0.77368 (9) | 0.58492 (10) | 0.49695 (5) | 0.0231 (2) | |
H17A | 0.8532 | 0.5899 | 0.5002 | 0.035* | |
H17B | 0.7422 | 0.5667 | 0.4515 | 0.035* | |
H17C | 0.7543 | 0.5202 | 0.5259 | 0.035* | |
C18 | 0.72031 (8) | 0.44419 (9) | 0.71819 (5) | 0.0169 (2) | |
C19 | 0.80443 (8) | 0.41235 (9) | 0.68346 (5) | 0.0176 (2) | |
H19 | 0.7982 | 0.4341 | 0.6384 | 0.021* | |
C20 | 0.89755 (8) | 0.34983 (9) | 0.71204 (5) | 0.0174 (2) | |
C21 | 0.90520 (8) | 0.32072 (9) | 0.77939 (5) | 0.0177 (2) | |
C22 | 0.82019 (8) | 0.34622 (9) | 0.81580 (5) | 0.0175 (2) | |
C23 | 0.72883 (8) | 0.40755 (9) | 0.78330 (5) | 0.0177 (2) | |
H23 | 0.6702 | 0.4248 | 0.8068 | 0.021* | |
C24 | 0.98864 (9) | 0.31798 (10) | 0.67141 (5) | 0.0206 (2) | |
C25 | 0.95624 (10) | 0.35071 (13) | 0.59845 (5) | 0.0307 (3) | |
H25A | 0.8885 | 0.3087 | 0.5811 | 0.046* | |
H25B | 1.0142 | 0.3255 | 0.5738 | 0.046* | |
H25C | 0.9454 | 0.4388 | 0.5941 | 0.046* | |
C26 | 1.09148 (9) | 0.39337 (11) | 0.69613 (6) | 0.0249 (2) | |
H26A | 1.0742 | 0.4803 | 0.6916 | 0.037* | |
H26B | 1.1491 | 0.3734 | 0.6700 | 0.037* | |
H26C | 1.1164 | 0.3743 | 0.7424 | 0.037* | |
C27 | 1.01253 (9) | 0.17986 (11) | 0.67306 (6) | 0.0249 (2) | |
H27A | 1.0304 | 0.1529 | 0.7188 | 0.037* | |
H27B | 1.0742 | 0.1632 | 0.6496 | 0.037* | |
H27C | 0.9481 | 0.1359 | 0.6519 | 0.037* | |
C28 | 0.82892 (9) | 0.31386 (10) | 0.88945 (5) | 0.0190 (2) | |
C29 | 0.72191 (9) | 0.33977 (11) | 0.91629 (5) | 0.0248 (2) | |
H29A | 0.7048 | 0.4267 | 0.9118 | 0.037* | |
H29B | 0.7299 | 0.3167 | 0.9628 | 0.037* | |
H29C | 0.6628 | 0.2924 | 0.8914 | 0.037* | |
C30 | 0.85384 (9) | 0.17769 (10) | 0.90225 (5) | 0.0221 (2) | |
H30A | 0.7966 | 0.1284 | 0.8769 | 0.033* | |
H30B | 0.8564 | 0.1604 | 0.9492 | 0.033* | |
H30C | 0.9244 | 0.1578 | 0.8888 | 0.033* | |
C31 | 0.91838 (9) | 0.39252 (10) | 0.92908 (5) | 0.0235 (2) | |
H31A | 0.9879 | 0.3783 | 0.9130 | 0.035* | |
H31B | 0.9254 | 0.3705 | 0.9757 | 0.035* | |
H31C | 0.8987 | 0.4787 | 0.9237 | 0.035* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.0206 (4) | 0.0269 (4) | 0.0198 (4) | −0.0059 (3) | 0.0049 (3) | −0.0048 (3) |
O2 | 0.0183 (4) | 0.0367 (5) | 0.0231 (4) | −0.0052 (3) | −0.0008 (3) | −0.0003 (3) |
O3 | 0.0160 (4) | 0.0296 (4) | 0.0183 (4) | −0.0029 (3) | −0.0017 (3) | −0.0008 (3) |
O4 | 0.0183 (4) | 0.0242 (4) | 0.0154 (3) | −0.0040 (3) | 0.0005 (3) | −0.0014 (3) |
O5 | 0.0179 (4) | 0.0335 (4) | 0.0168 (3) | 0.0085 (3) | 0.0021 (3) | 0.0044 (3) |
C1 | 0.0152 (5) | 0.0165 (5) | 0.0156 (4) | −0.0006 (4) | 0.0002 (3) | −0.0001 (4) |
C2 | 0.0156 (5) | 0.0178 (5) | 0.0178 (5) | 0.0016 (4) | 0.0017 (4) | 0.0031 (4) |
C3 | 0.0178 (5) | 0.0184 (5) | 0.0196 (5) | 0.0007 (4) | 0.0030 (4) | 0.0029 (4) |
C4 | 0.0252 (6) | 0.0245 (5) | 0.0254 (5) | −0.0009 (4) | 0.0093 (4) | −0.0035 (4) |
C5 | 0.0180 (5) | 0.0250 (5) | 0.0231 (5) | 0.0034 (4) | 0.0061 (4) | 0.0048 (4) |
C6 | 0.0157 (5) | 0.0384 (7) | 0.0255 (6) | 0.0018 (4) | 0.0034 (4) | 0.0043 (5) |
C7 | 0.0175 (5) | 0.0236 (5) | 0.0215 (5) | 0.0004 (4) | 0.0008 (4) | 0.0044 (4) |
C8 | 0.0269 (6) | 0.0366 (7) | 0.0312 (6) | 0.0074 (5) | 0.0129 (5) | 0.0055 (5) |
C9 | 0.0268 (6) | 0.0315 (6) | 0.0352 (6) | 0.0062 (5) | 0.0124 (5) | 0.0131 (5) |
C10 | 0.0162 (5) | 0.0165 (5) | 0.0157 (4) | 0.0008 (4) | 0.0015 (4) | −0.0007 (3) |
C11 | 0.0169 (5) | 0.0182 (5) | 0.0173 (5) | 0.0016 (4) | 0.0009 (4) | −0.0022 (4) |
C12 | 0.0198 (5) | 0.0221 (5) | 0.0161 (5) | 0.0021 (4) | −0.0007 (4) | 0.0009 (4) |
C13 | 0.0203 (5) | 0.0225 (5) | 0.0145 (5) | 0.0002 (4) | 0.0015 (4) | 0.0016 (4) |
C14 | 0.0191 (5) | 0.0210 (5) | 0.0177 (5) | −0.0030 (4) | 0.0022 (4) | 0.0002 (4) |
C15 | 0.0165 (5) | 0.0180 (5) | 0.0159 (4) | 0.0018 (4) | 0.0016 (4) | −0.0009 (4) |
C16 | 0.0274 (6) | 0.0315 (6) | 0.0210 (5) | −0.0006 (5) | 0.0033 (4) | 0.0075 (4) |
C17 | 0.0234 (5) | 0.0273 (6) | 0.0185 (5) | 0.0028 (4) | 0.0033 (4) | −0.0015 (4) |
C18 | 0.0160 (5) | 0.0163 (5) | 0.0177 (5) | 0.0002 (4) | 0.0005 (4) | 0.0001 (4) |
C19 | 0.0189 (5) | 0.0190 (5) | 0.0147 (4) | 0.0002 (4) | 0.0015 (4) | 0.0004 (4) |
C20 | 0.0165 (5) | 0.0188 (5) | 0.0166 (5) | 0.0005 (4) | 0.0017 (4) | −0.0007 (4) |
C21 | 0.0167 (5) | 0.0184 (5) | 0.0170 (5) | 0.0018 (4) | −0.0003 (4) | 0.0011 (4) |
C22 | 0.0193 (5) | 0.0175 (5) | 0.0155 (5) | 0.0004 (4) | 0.0017 (4) | 0.0007 (4) |
C23 | 0.0168 (5) | 0.0183 (5) | 0.0182 (5) | 0.0012 (4) | 0.0036 (4) | 0.0004 (4) |
C24 | 0.0178 (5) | 0.0278 (6) | 0.0164 (5) | 0.0046 (4) | 0.0032 (4) | 0.0019 (4) |
C25 | 0.0249 (6) | 0.0499 (8) | 0.0182 (5) | 0.0127 (5) | 0.0067 (4) | 0.0051 (5) |
C26 | 0.0192 (5) | 0.0281 (6) | 0.0279 (5) | 0.0018 (4) | 0.0048 (4) | 0.0071 (4) |
C27 | 0.0223 (5) | 0.0286 (6) | 0.0235 (5) | 0.0050 (4) | 0.0024 (4) | −0.0053 (4) |
C28 | 0.0211 (5) | 0.0209 (5) | 0.0151 (5) | 0.0025 (4) | 0.0029 (4) | 0.0012 (4) |
C29 | 0.0258 (6) | 0.0315 (6) | 0.0184 (5) | 0.0060 (4) | 0.0072 (4) | 0.0039 (4) |
C30 | 0.0265 (5) | 0.0211 (5) | 0.0186 (5) | 0.0018 (4) | 0.0028 (4) | 0.0031 (4) |
C31 | 0.0272 (6) | 0.0237 (5) | 0.0189 (5) | 0.0006 (4) | 0.0011 (4) | −0.0018 (4) |
O1—C3 | 1.3268 (13) | C14—H14B | 0.9900 |
O1—H1O | 0.930 (19) | C16—H16A | 0.9800 |
O2—C7 | 1.2466 (14) | C16—H16B | 0.9800 |
O3—C11 | 1.3293 (13) | C16—H16C | 0.9800 |
O3—H3O | 0.950 (19) | C17—H17A | 0.9800 |
O4—C15 | 1.2521 (12) | C17—H17B | 0.9800 |
O5—C21 | 1.3720 (12) | C17—H17C | 0.9800 |
O5—H5O | 0.848 (19) | C18—C23 | 1.3882 (14) |
C1—C2 | 1.5241 (14) | C18—C19 | 1.3931 (14) |
C1—C10 | 1.5270 (14) | C19—C20 | 1.3977 (14) |
C1—C18 | 1.5442 (13) | C19—H19 | 0.9500 |
C1—H1 | 1.0000 | C20—C21 | 1.4121 (14) |
C2—C3 | 1.3654 (15) | C20—C24 | 1.5414 (14) |
C2—C7 | 1.4479 (14) | C21—C22 | 1.4085 (14) |
C3—C4 | 1.5015 (14) | C22—C23 | 1.4014 (14) |
C4—C5 | 1.5329 (15) | C22—C28 | 1.5453 (13) |
C4—H4A | 0.9900 | C23—H23 | 0.9500 |
C4—H4B | 0.9900 | C24—C25 | 1.5390 (14) |
C5—C6 | 1.5262 (16) | C24—C26 | 1.5436 (16) |
C5—C9 | 1.5305 (15) | C24—C27 | 1.5459 (16) |
C5—C8 | 1.5329 (15) | C25—H25A | 0.9800 |
C6—C7 | 1.5104 (15) | C25—H25B | 0.9800 |
C6—H6A | 0.9900 | C25—H25C | 0.9800 |
C6—H6B | 0.9900 | C26—H26A | 0.9800 |
C8—H8A | 0.9800 | C26—H26B | 0.9800 |
C8—H8B | 0.9800 | C26—H26C | 0.9800 |
C8—H8C | 0.9800 | C27—H27A | 0.9800 |
C9—H9A | 0.9800 | C27—H27B | 0.9800 |
C9—H9B | 0.9800 | C27—H27C | 0.9800 |
C9—H9C | 0.9800 | C28—C29 | 1.5373 (14) |
C10—C11 | 1.3703 (14) | C28—C31 | 1.5423 (15) |
C10—C15 | 1.4361 (14) | C28—C30 | 1.5429 (14) |
C11—C12 | 1.5044 (14) | C29—H29A | 0.9800 |
C12—C13 | 1.5332 (14) | C29—H29B | 0.9800 |
C12—H12A | 0.9900 | C29—H29C | 0.9800 |
C12—H12B | 0.9900 | C30—H30A | 0.9800 |
C13—C16 | 1.5305 (15) | C30—H30B | 0.9800 |
C13—C14 | 1.5338 (14) | C30—H30C | 0.9800 |
C13—C17 | 1.5360 (15) | C31—H31A | 0.9800 |
C14—C15 | 1.5098 (14) | C31—H31B | 0.9800 |
C14—H14A | 0.9900 | C31—H31C | 0.9800 |
C3—O1—H1O | 111.9 (11) | H16A—C16—H16B | 109.5 |
C11—O3—H3O | 113.4 (11) | C13—C16—H16C | 109.5 |
C21—O5—H5O | 112.4 (12) | H16A—C16—H16C | 109.5 |
C2—C1—C10 | 114.48 (8) | H16B—C16—H16C | 109.5 |
C2—C1—C18 | 114.35 (8) | C13—C17—H17A | 109.5 |
C10—C1—C18 | 113.17 (8) | C13—C17—H17B | 109.5 |
C2—C1—H1 | 104.4 | H17A—C17—H17B | 109.5 |
C10—C1—H1 | 104.4 | C13—C17—H17C | 109.5 |
C18—C1—H1 | 104.4 | H17A—C17—H17C | 109.5 |
C3—C2—C7 | 117.84 (9) | H17B—C17—H17C | 109.5 |
C3—C2—C1 | 124.54 (9) | C23—C18—C19 | 117.75 (9) |
C7—C2—C1 | 117.58 (9) | C23—C18—C1 | 122.62 (9) |
O1—C3—C2 | 124.54 (9) | C19—C18—C1 | 119.51 (9) |
O1—C3—C4 | 112.67 (9) | C18—C19—C20 | 122.87 (9) |
C2—C3—C4 | 122.78 (10) | C18—C19—H19 | 118.6 |
C3—C4—C5 | 113.58 (9) | C20—C19—H19 | 118.6 |
C3—C4—H4A | 108.9 | C19—C20—C21 | 117.18 (9) |
C5—C4—H4A | 108.9 | C19—C20—C24 | 120.65 (9) |
C3—C4—H4B | 108.9 | C21—C20—C24 | 122.14 (9) |
C5—C4—H4B | 108.9 | O5—C21—C22 | 115.54 (9) |
H4A—C4—H4B | 107.7 | O5—C21—C20 | 122.49 (9) |
C6—C5—C9 | 110.09 (10) | C22—C21—C20 | 121.96 (9) |
C6—C5—C4 | 106.73 (9) | C23—C22—C21 | 117.25 (9) |
C9—C5—C4 | 111.35 (9) | C23—C22—C28 | 120.95 (9) |
C6—C5—C8 | 110.61 (9) | C21—C22—C28 | 121.73 (9) |
C9—C5—C8 | 108.47 (9) | C18—C23—C22 | 122.82 (9) |
C4—C5—C8 | 109.60 (10) | C18—C23—H23 | 118.6 |
C7—C6—C5 | 113.92 (9) | C22—C23—H23 | 118.6 |
C7—C6—H6A | 108.8 | C25—C24—C20 | 111.64 (9) |
C5—C6—H6A | 108.8 | C25—C24—C26 | 106.33 (9) |
C7—C6—H6B | 108.8 | C20—C24—C26 | 109.60 (9) |
C5—C6—H6B | 108.8 | C25—C24—C27 | 105.83 (9) |
H6A—C6—H6B | 107.7 | C20—C24—C27 | 111.38 (9) |
O2—C7—C2 | 121.33 (10) | C26—C24—C27 | 111.91 (9) |
O2—C7—C6 | 118.45 (10) | C24—C25—H25A | 109.5 |
C2—C7—C6 | 120.18 (10) | C24—C25—H25B | 109.5 |
C5—C8—H8A | 109.5 | H25A—C25—H25B | 109.5 |
C5—C8—H8B | 109.5 | C24—C25—H25C | 109.5 |
H8A—C8—H8B | 109.5 | H25A—C25—H25C | 109.5 |
C5—C8—H8C | 109.5 | H25B—C25—H25C | 109.5 |
H8A—C8—H8C | 109.5 | C24—C26—H26A | 109.5 |
H8B—C8—H8C | 109.5 | C24—C26—H26B | 109.5 |
C5—C9—H9A | 109.5 | H26A—C26—H26B | 109.5 |
C5—C9—H9B | 109.5 | C24—C26—H26C | 109.5 |
H9A—C9—H9B | 109.5 | H26A—C26—H26C | 109.5 |
C5—C9—H9C | 109.5 | H26B—C26—H26C | 109.5 |
H9A—C9—H9C | 109.5 | C24—C27—H27A | 109.5 |
H9B—C9—H9C | 109.5 | C24—C27—H27B | 109.5 |
C11—C10—C15 | 117.13 (9) | H27A—C27—H27B | 109.5 |
C11—C10—C1 | 121.77 (9) | C24—C27—H27C | 109.5 |
C15—C10—C1 | 120.93 (8) | H27A—C27—H27C | 109.5 |
O3—C11—C10 | 124.11 (9) | H27B—C27—H27C | 109.5 |
O3—C11—C12 | 112.55 (8) | C29—C28—C31 | 107.37 (9) |
C10—C11—C12 | 123.32 (9) | C29—C28—C30 | 106.28 (9) |
C11—C12—C13 | 112.71 (8) | C31—C28—C30 | 110.04 (9) |
C11—C12—H12A | 109.1 | C29—C28—C22 | 111.71 (8) |
C13—C12—H12A | 109.0 | C31—C28—C22 | 109.34 (8) |
C11—C12—H12B | 109.0 | C30—C28—C22 | 111.97 (8) |
C13—C12—H12B | 109.1 | C28—C29—H29A | 109.5 |
H12A—C12—H12B | 107.8 | C28—C29—H29B | 109.5 |
C16—C13—C12 | 110.75 (9) | H29A—C29—H29B | 109.5 |
C16—C13—C14 | 108.46 (9) | C28—C29—H29C | 109.5 |
C12—C13—C14 | 107.76 (8) | H29A—C29—H29C | 109.5 |
C16—C13—C17 | 108.58 (9) | H29B—C29—H29C | 109.5 |
C12—C13—C17 | 110.09 (9) | C28—C30—H30A | 109.5 |
C14—C13—C17 | 111.20 (8) | C28—C30—H30B | 109.5 |
C15—C14—C13 | 115.84 (9) | H30A—C30—H30B | 109.5 |
C15—C14—H14A | 108.3 | C28—C30—H30C | 109.5 |
C13—C14—H14A | 108.3 | H30A—C30—H30C | 109.5 |
C15—C14—H14B | 108.3 | H30B—C30—H30C | 109.5 |
C13—C14—H14B | 108.3 | C28—C31—H31A | 109.5 |
H14A—C14—H14B | 107.4 | C28—C31—H31B | 109.5 |
O4—C15—C10 | 121.45 (9) | H31A—C31—H31B | 109.5 |
O4—C15—C14 | 118.02 (9) | C28—C31—H31C | 109.5 |
C10—C15—C14 | 120.51 (9) | H31A—C31—H31C | 109.5 |
C13—C16—H16A | 109.5 | H31B—C31—H31C | 109.5 |
C13—C16—H16B | 109.5 | ||
C10—C1—C2—C3 | −80.31 (12) | C11—C10—C15—O4 | 159.09 (10) |
C18—C1—C2—C3 | 52.59 (13) | C1—C10—C15—O4 | −16.20 (15) |
C10—C1—C2—C7 | 97.16 (11) | C11—C10—C15—C14 | −19.37 (14) |
C18—C1—C2—C7 | −129.95 (9) | C1—C10—C15—C14 | 165.34 (9) |
C7—C2—C3—O1 | −170.29 (10) | C13—C14—C15—O4 | 171.74 (9) |
C1—C2—C3—O1 | 7.17 (16) | C13—C14—C15—C10 | −9.75 (14) |
C7—C2—C3—C4 | 10.96 (15) | C2—C1—C18—C23 | 14.42 (14) |
C1—C2—C3—C4 | −171.58 (9) | C10—C1—C18—C23 | 147.93 (10) |
O1—C3—C4—C5 | −156.69 (9) | C2—C1—C18—C19 | −169.61 (9) |
C2—C3—C4—C5 | 22.20 (15) | C10—C1—C18—C19 | −36.10 (13) |
C3—C4—C5—C6 | −51.77 (12) | C23—C18—C19—C20 | −2.46 (15) |
C3—C4—C5—C9 | 68.40 (12) | C1—C18—C19—C20 | −178.62 (9) |
C3—C4—C5—C8 | −171.58 (9) | C18—C19—C20—C21 | −1.08 (15) |
C9—C5—C6—C7 | −69.22 (12) | C18—C19—C20—C24 | −179.42 (10) |
C4—C5—C6—C7 | 51.76 (13) | C19—C20—C21—O5 | −175.48 (9) |
C8—C5—C6—C7 | 170.91 (10) | C24—C20—C21—O5 | 2.84 (16) |
C3—C2—C7—O2 | 166.72 (10) | C19—C20—C21—C22 | 3.91 (15) |
C1—C2—C7—O2 | −10.92 (15) | C24—C20—C21—C22 | −177.77 (10) |
C3—C2—C7—C6 | −10.86 (15) | O5—C21—C22—C23 | 176.38 (9) |
C1—C2—C7—C6 | 171.50 (9) | C20—C21—C22—C23 | −3.06 (15) |
C5—C6—C7—O2 | 159.86 (10) | O5—C21—C22—C28 | −0.72 (14) |
C5—C6—C7—C2 | −22.50 (15) | C20—C21—C22—C28 | 179.85 (9) |
C2—C1—C10—C11 | −82.41 (12) | C19—C18—C23—C22 | 3.40 (15) |
C18—C1—C10—C11 | 144.14 (9) | C1—C18—C23—C22 | 179.43 (9) |
C2—C1—C10—C15 | 92.66 (11) | C21—C22—C23—C18 | −0.72 (15) |
C18—C1—C10—C15 | −40.79 (12) | C28—C22—C23—C18 | 176.40 (10) |
C15—C10—C11—O3 | −167.64 (9) | C19—C20—C24—C25 | −6.12 (15) |
C1—C10—C11—O3 | 7.61 (15) | C21—C20—C24—C25 | 175.62 (10) |
C15—C10—C11—C12 | 10.77 (15) | C19—C20—C24—C26 | 111.43 (11) |
C1—C10—C11—C12 | −173.97 (9) | C21—C20—C24—C26 | −66.83 (13) |
O3—C11—C12—C13 | −155.18 (9) | C19—C20—C24—C27 | −124.18 (10) |
C10—C11—C12—C13 | 26.24 (14) | C21—C20—C24—C27 | 57.56 (13) |
C11—C12—C13—C16 | −169.61 (9) | C23—C22—C28—C29 | 8.36 (14) |
C11—C12—C13—C14 | −51.12 (11) | C21—C22—C28—C29 | −174.66 (10) |
C11—C12—C13—C17 | 70.30 (11) | C23—C22—C28—C31 | −110.35 (11) |
C16—C13—C14—C15 | 163.76 (9) | C21—C22—C28—C31 | 66.63 (12) |
C12—C13—C14—C15 | 43.82 (12) | C23—C22—C28—C30 | 127.43 (10) |
C17—C13—C14—C15 | −76.92 (11) | C21—C22—C28—C30 | −55.59 (13) |
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1O···O4 | 0.930 (19) | 1.711 (19) | 2.6201 (11) | 164.7 (17) |
O3—H3O···O2 | 0.950 (19) | 1.68 (2) | 2.6174 (11) | 170.3 (17) |
O5—H5O···O4i | 0.848 (19) | 2.128 (18) | 2.8285 (11) | 139.7 (16) |
C14—H14A···O5ii | 0.99 | 2.48 | 3.1912 (12) | 128 |
Symmetry codes: (i) −x+2, y−1/2, −z+3/2; (ii) −x+2, y+1/2, −z+3/2. |
H4B···H16B | 2.39 | x, 3/2 - y, 1/2 + z |
H4A···H1 | 2.31 | 1 - x, 1/2 + y, 3/2 - z |
H17B···O2 | 2.65 | 1 - x, 1 - y, 1 - z |
O4···H5O | 2.12 | 2 - x, 1/2 + y, 3/2 - z |
C17···H30B | 3.10 | x, 1/2 - y, -1/2 + z |
H26C···H6A | 2.58 | 1 + x, y, z |
H25B···H17A | 2.57 | 2 - x, 1 - y, 1 - z |
Acknowledgements
Authors' contributions are as follows. Conceptualization, ANK and IGM; methodology, ANK and IGM; investigation, ANK, MA and AB; writing (original draft), MA and ANK; writing (review and editing of the manuscript), MA and ANK; visualization, MA, ANK and IGM; funding acquisition, VNK, AB and ANK; resources, AB, VNK, RMR and LVA; supervision, ANK and MA.
Funding information
This paper was supported by Baku State University, UNEC and the RUDN University Strategic Academic Leadership Program.
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