research communications
Synthesis,
and Hirshfeld surface analysis of 1-(12-bromododecyl)indoline-2,3-dioneaLaboratory of Applied Organic Chemistry, Faculty of Science and Technology, University of Sidi Mohamed Ben Abdellah BP 2202, Fez, Morocco, bDepartment of Chemistry, Tulane University, New Orleans, LA 70118, USA, cDepartment of Physics, Hacettepe University, 06800 Beytepe, Ankara, Türkiye, dUniversity of Lille, CNRS, UAR 3290, MSAP, Miniaturization for Synthesis, Analysis and Proteomics, F-59000 Lille, France, eLaboratory of Organic and physical Chemistry, Applied Bioorganic Chemistry Team, Faculty of Sciences, Ibnou Zohr University, Agadir, Morocco, and fLaboratory of Heterocyclic Organic Chemistry, Medicines Science Research Center, Pharmacochemistry Competence Center, Mohammed V University in Rabat, Faculty of Sciences, Morocco
*Correspondence e-mail: Nohaila.rharmili@usmba.ac.ma
This article is part of a collection of articles to commemorate the founding of the African Crystallographic Association and the 75th anniversary of the IUCr.
In the title compound, C20H28BrNO2, the indoline portion is almost planar and the 12-bromododecyl chain adopts an all-trans conformation apart from the gauche terminal C—C—C—Br fragment. A micellar-like structure is generated in the crystal by C—H⋯O hydrogen bonds and π-stacking interactions between indolinedione head groups and intercalation of the 12-bromododecyl tails. The Hirshfeld surface analysis of the indicates that the most important contributions for the crystal packing are from H⋯H (58.9%), H⋯O/O⋯H (17.9%) and H⋯Br/Br⋯H (9.5%) contacts. A density functional theory (DFT) optimized structure at the B3LYP/ 6–311 G(d,p) level shows good agreement with the experimentally determined molecular structure in the solid state.
Keywords: crystal structure; indoline-2,3-dione; hydrogen bond; dodecyl; π stacking; intercalation.
CCDC reference: 2301451
1. Chemical context
The chemistry of isatin (1H-indole-2,3-dione; C8H5NO2) and its derivatives has been studied extensively owing to its broad array of uses, particularly within the realms of organic synthesis and medicinal chemistry. The initial reports detailing the synthesis of isatin and its derivatives can be traced back to the early 19th century (Rharmili et al., 2023; Sonam & Kakkar, 2019). Nearly two centuries after the publication of these pioneering works, a comprehensive review highlighted the remarkable adaptability of this molecular fragment (Borad et al., 2014). Isatin derivatives have received much attention due to their properties such as anti-microbial (Pakravan et al., 2013), anti-mycobacterial (Li et al., 2018), anti-cancer (Khan et al., 2015) and corrosion-inhibitory activities (Verma et al., 2023). As a continuation of our studies in this area (Rharmili et al., 2023), we now report the synthesis, structure and Hirshfeld surface analysis and DFT computations of the title compound, C20H28BrNO2 (I).
2. Structural commentary
As expected, the C1–C8/N1 bicyclic portion of (I) is almost planar (r.m.s. deviation of fitted atoms = 0.007 Å), with C8 showing the largest deviation from the mean plane, by 0.0130 (12) Å. The C10–C20 portion of the dodecyl chain is in an all-trans conformation (Fig. 1), as indicated by the moduli of the torsion angles involving these atoms being within 6° of 180° while the terminal C18—C19—C20—Br1 torsion angle is −70.41 (19)°, indicating a gauche conformation. The sum of the bond angles about N1 is 359.9°, suggesting sp2 and involvement of the N lone pair in π bonding with the benzene ring. This is manifested in the C8—N1 bond length of 1.3595 (19) Å as compared with the C1—N1 distance of 1.4113 (19) Å.
3. Supramolecular features
In the crystal, chains of molecules extending along the c-axis direction are formed by C2—H2⋯O2 and C9—H9A⋯O2 hydrogen bonds (Table 1) and connected into layers parallel to (201) by C3—H3⋯O1 hydrogen bonds (Table 1 and Fig. 2). Pairs of layers are connected head-to-head by C5—H5⋯O1 hydrogen bonds (Table 1) and slipped π-stacking interactions between the five- and six-membered rings [centroid–centroid = 3.6003 (11) Å, dihedral angle = 0.39 (9)°, slippage = 1.35 Å] and these units form a micellar-like structure by intercalation of the 12-bromodecyl chains aided by C20—H20A⋯O2 hydrogen bonds (Table 1 and Fig. 3).
4. Hirshfeld surface analysis and DFT calculations
To further visualize the intermolecular interactions in the crystal of (I), a Hirshfeld surface (HS) analysis was carried out by using Crystal Explorer 17.5 (Turner et al., 2017) (Fig. 4). The red spots indicate their roles as the respective donors and/or acceptors noted above. The overall two-dimensional fingerprint plot, Fig. 5a, and those delineated into different contact types are illustrated in Fig. 5 b–m, respectively, together with their relative contributions to the Hirshfeld surface. The most important interaction is H⋯H contributing 58.9% to the overall crystal packing, which is reflected in Fig. 5b as widely scattered points of high density due to the large hydrogen content of the molecule with the tip at de = di = 0.98 Å. The H⋯O/O⋯H contacts contribute 17.9% to the HS, as may be seen in Fig. 5c, where the symmetric pair of spikes is observed with the tips at de + di = 2.34 Å. The wings of H⋯Br/Br⋯H contacts (Fig. 5d) are observed with the tips at de + di = 2.88 Å, and a contribution of 9.5% to the HS. In the presence of C—H⋯π interactions, the pair of characteristic wings in the fingerprint plot delineated into H⋯C/C⋯H contacts, Fig. 5e, has a 6.9% contribution to the HS with the tips at de + di = 3.08 Å. The C⋯C contacts (Fig. 5f), appearing as a bullet-shaped distribution of points, have a contribution of 3.0% to the HS with the tip at de = di = 1.64 Å. The tiny wing pair of C⋯Br/Br⋯C contacts (Fig. 5g) with a 2.0% contribution to the HS has the tips at de + di = 3.54 Å. Other contact types make a negligible contribution to the HS.
The theoretical structure of (I) was optimized in a gas-phase environment using density functional theory (DFT), using the B3LYP functional and 6-311G(d,p) basis-set calculations (Becke, 1992), giving an acceptable agreement between observed and calculated geometry (supplementary Table 1): the R2 values of the bond lengths and bond angles of (I) were calculated to be 0.998 and 0.991, respectively. The terminal C18—C19—C20—Br1 grouping has observed and calculated torsion angles of −70.41 (19) and 69.06°, respectively. The of (I) are depicted in supplementary Fig. 1 and the HOMO–LUMO gap of the molecule is about 3.57 eV (supplementary Table 2).
5. Database survey
A search conducted in the Cambridge Structural Database (CSD; Version 5.42, last updated in May 2023; Groom et al., 2016) targeting N-substituted isatin derivatives yielded a total of 58 results. Among these, there were five reports on the structure of isatin itself and four instances of the structure of N-methylisatin. Thirteen of these structures featured an alkyl chain consisting of two or more carbon atoms. The compound most closely related to the title compound is 1-(3-bromopropyl)-1H-indole-2,3-dione (CSD refcode AKOBIN; Qachchachi et al., 2016), which also features a gauche terminal C—C—C—Br grouping.
6. Synthesis and crystallization
To a solution of 1H-indoline-2,3-dione (2.0 mmol), potassium carbonate (4.0 mmol) and tetra-n-butylammoniumbromide (0.20 mmol) in dimethylformamide (20 ml) was added 1,12-dibromododecane (2.2 mmol) and the mixture was then left to stir for 18 h at room temperature. Following salt filtration, the solvent was evaporated at low pressure, and the resulting residue was dissolved in dichloromethane. The organic phase was then dried over Na2SO4 and concentrated. The resulting mixture was chromatographed using a silica gel column with hexane/ethylacetate as the (3/1). Single crystals of the title compound suitable for X-ray analysis were obtained by slow evaporation of an ethanol solution.
7. Refinement
Crystal data, data collection and structure . H atoms attached to carbon were placed in calculated positions (C—H = 0.95–0.99 Å). All were included as riding contributions with isotropic displacement parameters 1.2–1.5 times those of the attached atoms.
details are summarized in Table 2
|
Supporting information
CCDC reference: 2301451
https://doi.org/10.1107/S2056989023009052/hb8077sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S2056989023009052/hb8077Isup2.hkl
Supporting information file. DOI: https://doi.org/10.1107/S2056989023009052/hb8077Isup3.cdx
HOMO-LUMO diagram. DOI: https://doi.org/10.1107/S2056989023009052/hb8077sup4.pdf
supplementary Fig. 1. DOI: https://doi.org/10.1107/S2056989023009052/hb8077sup5.png
Supporting information file. DOI: https://doi.org/10.1107/S2056989023009052/hb8077Isup6.cml
C20H28BrNO2 | F(000) = 824 |
Mr = 394.34 | Dx = 1.309 Mg m−3 |
Monoclinic, P21/c | Cu Kα radiation, λ = 1.54178 Å |
a = 20.5385 (5) Å | Cell parameters from 9620 reflections |
b = 8.1977 (2) Å | θ = 6.6–74.7° |
c = 12.3185 (3) Å | µ = 2.88 mm−1 |
β = 105.231 (1)° | T = 150 K |
V = 2001.19 (8) Å3 | Column, yellow |
Z = 4 | 0.23 × 0.07 × 0.05 mm |
Bruker D8 VENTURE PHOTON 3 CPAD diffractometer | 4091 independent reflections |
Radiation source: INCOATEC IµS micro—-focus source | 3810 reflections with I > 2σ(I) |
Mirror monochromator | Rint = 0.038 |
Detector resolution: 7.3910 pixels mm-1 | θmax = 74.7°, θmin = 5.8° |
φ and ω scans | h = −25→25 |
Absorption correction: multi-scan (SADABS; Krause et al., 2015) | k = −10→10 |
Tmin = 0.74, Tmax = 0.87 | l = −15→15 |
42466 measured reflections |
Refinement on F2 | Primary atom site location: dual |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.030 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.084 | H-atom parameters constrained |
S = 1.06 | w = 1/[σ2(Fo2) + (0.0459P)2 + 0.8387P] where P = (Fo2 + 2Fc2)/3 |
4091 reflections | (Δ/σ)max = 0.001 |
217 parameters | Δρmax = 0.44 e Å−3 |
0 restraints | Δρmin = −0.66 e Å−3 |
Experimental. The diffraction data were obtained from 14 sets of frames, each of width 0.5° in ω or φ, collected with scan parameters determined by the "strategy" routine in APEX4. The scan time was θ-dependent and ranged from 3 to 12 sec/frame. |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. H-atoms attached to carbon were placed in calculated positions (C—H = 0.95 - 0.99 Å). All were included as riding contributions with isotropic displacement parameters 1.2 - 1.5 times those of the attached atoms. |
x | y | z | Uiso*/Ueq | ||
Br1 | 0.23573 (2) | 0.63104 (3) | −0.09416 (2) | 0.04517 (9) | |
O1 | 0.94289 (6) | 0.56654 (16) | 1.23349 (9) | 0.0368 (3) | |
O2 | 0.85863 (7) | 0.82935 (15) | 1.10434 (10) | 0.0389 (3) | |
N1 | 0.86491 (7) | 0.66570 (16) | 0.95494 (10) | 0.0284 (3) | |
C1 | 0.89366 (8) | 0.51288 (19) | 0.94215 (12) | 0.0279 (3) | |
C2 | 0.89087 (9) | 0.4326 (2) | 0.84263 (13) | 0.0342 (3) | |
H2 | 0.868176 | 0.478183 | 0.771913 | 0.041* | |
C3 | 0.92292 (10) | 0.2814 (2) | 0.85063 (15) | 0.0408 (4) | |
H3 | 0.921145 | 0.221844 | 0.783763 | 0.049* | |
C4 | 0.95722 (11) | 0.2157 (2) | 0.95316 (17) | 0.0441 (4) | |
H4 | 0.978553 | 0.112444 | 0.955471 | 0.053* | |
C5 | 0.96083 (9) | 0.2996 (2) | 1.05346 (15) | 0.0381 (4) | |
H5 | 0.984786 | 0.255493 | 1.123970 | 0.046* | |
C6 | 0.92842 (8) | 0.44880 (19) | 1.04685 (12) | 0.0291 (3) | |
C7 | 0.92153 (8) | 0.5672 (2) | 1.13243 (12) | 0.0295 (3) | |
C8 | 0.87763 (8) | 0.70783 (19) | 1.06527 (12) | 0.0288 (3) | |
C9 | 0.82336 (8) | 0.75912 (19) | 0.86123 (13) | 0.0305 (3) | |
H9A | 0.846127 | 0.762987 | 0.799706 | 0.037* | |
H9B | 0.819151 | 0.872468 | 0.886282 | 0.037* | |
C10 | 0.75317 (8) | 0.6868 (2) | 0.81630 (13) | 0.0331 (3) | |
H10A | 0.727660 | 0.697533 | 0.873860 | 0.040* | |
H10B | 0.756986 | 0.569283 | 0.800587 | 0.040* | |
C11 | 0.71523 (8) | 0.7737 (2) | 0.70892 (13) | 0.0341 (3) | |
H11A | 0.711684 | 0.890940 | 0.725920 | 0.041* | |
H11B | 0.741989 | 0.765068 | 0.653024 | 0.041* | |
C12 | 0.64480 (9) | 0.7080 (2) | 0.65650 (15) | 0.0368 (4) | |
H12A | 0.616860 | 0.722365 | 0.710190 | 0.044* | |
H12B | 0.647686 | 0.589718 | 0.642263 | 0.044* | |
C13 | 0.61065 (9) | 0.7937 (2) | 0.54628 (15) | 0.0383 (4) | |
H13A | 0.607081 | 0.911480 | 0.561449 | 0.046* | |
H13B | 0.639655 | 0.782183 | 0.494000 | 0.046* | |
C14 | 0.54078 (9) | 0.7290 (2) | 0.48892 (16) | 0.0417 (4) | |
H14A | 0.511876 | 0.738333 | 0.541513 | 0.050* | |
H14B | 0.544331 | 0.611842 | 0.471812 | 0.050* | |
C15 | 0.50706 (9) | 0.8189 (3) | 0.38039 (15) | 0.0409 (4) | |
H15A | 0.502037 | 0.935261 | 0.398112 | 0.049* | |
H15B | 0.536913 | 0.813268 | 0.329128 | 0.049* | |
C16 | 0.43816 (10) | 0.7513 (3) | 0.31976 (16) | 0.0441 (4) | |
H16A | 0.409126 | 0.750231 | 0.372436 | 0.053* | |
H16B | 0.443516 | 0.637118 | 0.297345 | 0.053* | |
C17 | 0.40299 (9) | 0.8494 (2) | 0.21510 (16) | 0.0407 (4) | |
H17A | 0.396679 | 0.962919 | 0.237824 | 0.049* | |
H17B | 0.432541 | 0.852711 | 0.163291 | 0.049* | |
C18 | 0.33462 (9) | 0.7797 (2) | 0.15255 (15) | 0.0401 (4) | |
H18A | 0.341349 | 0.670770 | 0.122508 | 0.048* | |
H18B | 0.306601 | 0.765498 | 0.206143 | 0.048* | |
C19 | 0.29721 (10) | 0.8881 (2) | 0.05611 (17) | 0.0414 (4) | |
H19A | 0.292143 | 0.998012 | 0.086216 | 0.050* | |
H19B | 0.324937 | 0.899538 | 0.001841 | 0.050* | |
C20 | 0.22811 (10) | 0.8256 (2) | −0.00592 (17) | 0.0439 (4) | |
H20A | 0.203421 | 0.911798 | −0.056606 | 0.053* | |
H20B | 0.202084 | 0.798731 | 0.048907 | 0.053* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Br1 | 0.04657 (13) | 0.04566 (14) | 0.04404 (13) | −0.00114 (8) | 0.01324 (9) | −0.01268 (8) |
O1 | 0.0439 (6) | 0.0442 (7) | 0.0219 (5) | −0.0049 (5) | 0.0078 (4) | 0.0027 (5) |
O2 | 0.0566 (7) | 0.0320 (6) | 0.0324 (6) | 0.0056 (5) | 0.0192 (5) | −0.0036 (5) |
N1 | 0.0378 (7) | 0.0268 (6) | 0.0222 (6) | 0.0072 (5) | 0.0106 (5) | 0.0020 (5) |
C1 | 0.0337 (7) | 0.0273 (7) | 0.0249 (7) | 0.0043 (6) | 0.0116 (6) | 0.0020 (6) |
C2 | 0.0437 (9) | 0.0350 (8) | 0.0255 (7) | 0.0052 (7) | 0.0120 (6) | −0.0016 (6) |
C3 | 0.0544 (10) | 0.0344 (9) | 0.0381 (9) | 0.0054 (8) | 0.0202 (8) | −0.0067 (7) |
C4 | 0.0571 (11) | 0.0319 (9) | 0.0494 (10) | 0.0138 (8) | 0.0246 (9) | 0.0036 (7) |
C5 | 0.0446 (9) | 0.0365 (9) | 0.0360 (8) | 0.0110 (7) | 0.0153 (7) | 0.0110 (7) |
C6 | 0.0351 (7) | 0.0303 (8) | 0.0239 (7) | 0.0034 (6) | 0.0114 (6) | 0.0041 (6) |
C7 | 0.0346 (7) | 0.0314 (8) | 0.0243 (7) | −0.0012 (6) | 0.0109 (6) | 0.0033 (6) |
C8 | 0.0374 (8) | 0.0285 (7) | 0.0229 (7) | 0.0006 (6) | 0.0124 (6) | 0.0004 (6) |
C9 | 0.0374 (8) | 0.0297 (7) | 0.0255 (7) | 0.0056 (6) | 0.0103 (6) | 0.0067 (6) |
C10 | 0.0368 (8) | 0.0338 (8) | 0.0302 (7) | 0.0029 (6) | 0.0113 (6) | 0.0063 (6) |
C11 | 0.0339 (8) | 0.0383 (8) | 0.0306 (8) | 0.0028 (6) | 0.0096 (6) | 0.0071 (6) |
C12 | 0.0353 (8) | 0.0396 (9) | 0.0365 (8) | 0.0003 (7) | 0.0114 (7) | 0.0037 (7) |
C13 | 0.0327 (8) | 0.0468 (10) | 0.0357 (8) | 0.0007 (7) | 0.0098 (7) | 0.0031 (7) |
C14 | 0.0365 (9) | 0.0459 (10) | 0.0413 (9) | −0.0022 (7) | 0.0079 (7) | 0.0006 (8) |
C15 | 0.0333 (8) | 0.0515 (10) | 0.0379 (9) | −0.0005 (8) | 0.0093 (7) | 0.0002 (8) |
C16 | 0.0389 (9) | 0.0501 (10) | 0.0401 (9) | −0.0043 (8) | 0.0050 (7) | −0.0003 (8) |
C17 | 0.0367 (9) | 0.0468 (10) | 0.0377 (9) | −0.0005 (7) | 0.0084 (7) | −0.0011 (7) |
C18 | 0.0384 (9) | 0.0433 (9) | 0.0367 (9) | −0.0009 (7) | 0.0067 (7) | −0.0011 (7) |
C19 | 0.0449 (10) | 0.0335 (8) | 0.0429 (9) | 0.0040 (7) | 0.0062 (8) | −0.0043 (7) |
C20 | 0.0440 (10) | 0.0399 (9) | 0.0442 (10) | 0.0116 (8) | 0.0050 (8) | −0.0084 (8) |
Br1—C20 | 1.9593 (18) | C12—C13 | 1.526 (2) |
O1—C7 | 1.2064 (19) | C12—H12A | 0.9900 |
O2—C8 | 1.214 (2) | C12—H12B | 0.9900 |
N1—C8 | 1.3595 (19) | C13—C14 | 1.519 (2) |
N1—C1 | 1.4113 (19) | C13—H13A | 0.9900 |
N1—C9 | 1.4593 (19) | C13—H13B | 0.9900 |
C1—C2 | 1.379 (2) | C14—C15 | 1.524 (3) |
C1—C6 | 1.402 (2) | C14—H14A | 0.9900 |
C2—C3 | 1.395 (2) | C14—H14B | 0.9900 |
C2—H2 | 0.9500 | C15—C16 | 1.521 (3) |
C3—C4 | 1.384 (3) | C15—H15A | 0.9900 |
C3—H3 | 0.9500 | C15—H15B | 0.9900 |
C4—C5 | 1.399 (3) | C16—C17 | 1.530 (3) |
C4—H4 | 0.9500 | C16—H16A | 0.9900 |
C5—C6 | 1.385 (2) | C16—H16B | 0.9900 |
C5—H5 | 0.9500 | C17—C18 | 1.524 (2) |
C6—C7 | 1.467 (2) | C17—H17A | 0.9900 |
C7—C8 | 1.560 (2) | C17—H17B | 0.9900 |
C9—C10 | 1.522 (2) | C18—C19 | 1.521 (3) |
C9—H9A | 0.9900 | C18—H18A | 0.9900 |
C9—H9B | 0.9900 | C18—H18B | 0.9900 |
C10—C11 | 1.524 (2) | C19—C20 | 1.514 (3) |
C10—H10A | 0.9900 | C19—H19A | 0.9900 |
C10—H10B | 0.9900 | C19—H19B | 0.9900 |
C11—C12 | 1.519 (2) | C20—H20A | 0.9900 |
C11—H11A | 0.9900 | C20—H20B | 0.9900 |
C11—H11B | 0.9900 | ||
C8—N1—C1 | 111.16 (12) | H12A—C12—H12B | 107.9 |
C8—N1—C9 | 125.20 (13) | C14—C13—C12 | 114.24 (15) |
C1—N1—C9 | 123.53 (13) | C14—C13—H13A | 108.7 |
C2—C1—C6 | 122.08 (14) | C12—C13—H13A | 108.7 |
C2—C1—N1 | 127.01 (14) | C14—C13—H13B | 108.7 |
C6—C1—N1 | 110.90 (13) | C12—C13—H13B | 108.7 |
C1—C2—C3 | 116.91 (15) | H13A—C13—H13B | 107.6 |
C1—C2—H2 | 121.5 | C13—C14—C15 | 113.28 (16) |
C3—C2—H2 | 121.5 | C13—C14—H14A | 108.9 |
C4—C3—C2 | 121.89 (16) | C15—C14—H14A | 108.9 |
C4—C3—H3 | 119.1 | C13—C14—H14B | 108.9 |
C2—C3—H3 | 119.1 | C15—C14—H14B | 108.9 |
C3—C4—C5 | 120.73 (16) | H14A—C14—H14B | 107.7 |
C3—C4—H4 | 119.6 | C16—C15—C14 | 113.84 (16) |
C5—C4—H4 | 119.6 | C16—C15—H15A | 108.8 |
C6—C5—C4 | 117.98 (16) | C14—C15—H15A | 108.8 |
C6—C5—H5 | 121.0 | C16—C15—H15B | 108.8 |
C4—C5—H5 | 121.0 | C14—C15—H15B | 108.8 |
C5—C6—C1 | 120.39 (14) | H15A—C15—H15B | 107.7 |
C5—C6—C7 | 132.69 (15) | C15—C16—C17 | 113.24 (16) |
C1—C6—C7 | 106.93 (13) | C15—C16—H16A | 108.9 |
O1—C7—C6 | 131.37 (15) | C17—C16—H16A | 108.9 |
O1—C7—C8 | 123.61 (15) | C15—C16—H16B | 108.9 |
C6—C7—C8 | 105.03 (12) | C17—C16—H16B | 108.9 |
O2—C8—N1 | 127.38 (15) | H16A—C16—H16B | 107.7 |
O2—C8—C7 | 126.65 (14) | C18—C17—C16 | 113.39 (16) |
N1—C8—C7 | 105.96 (12) | C18—C17—H17A | 108.9 |
N1—C9—C10 | 112.60 (13) | C16—C17—H17A | 108.9 |
N1—C9—H9A | 109.1 | C18—C17—H17B | 108.9 |
C10—C9—H9A | 109.1 | C16—C17—H17B | 108.9 |
N1—C9—H9B | 109.1 | H17A—C17—H17B | 107.7 |
C10—C9—H9B | 109.1 | C19—C18—C17 | 112.64 (16) |
H9A—C9—H9B | 107.8 | C19—C18—H18A | 109.1 |
C9—C10—C11 | 110.67 (13) | C17—C18—H18A | 109.1 |
C9—C10—H10A | 109.5 | C19—C18—H18B | 109.1 |
C11—C10—H10A | 109.5 | C17—C18—H18B | 109.1 |
C9—C10—H10B | 109.5 | H18A—C18—H18B | 107.8 |
C11—C10—H10B | 109.5 | C20—C19—C18 | 114.25 (16) |
H10A—C10—H10B | 108.1 | C20—C19—H19A | 108.7 |
C12—C11—C10 | 114.56 (14) | C18—C19—H19A | 108.7 |
C12—C11—H11A | 108.6 | C20—C19—H19B | 108.7 |
C10—C11—H11A | 108.6 | C18—C19—H19B | 108.7 |
C12—C11—H11B | 108.6 | H19A—C19—H19B | 107.6 |
C10—C11—H11B | 108.6 | C19—C20—Br1 | 110.79 (13) |
H11A—C11—H11B | 107.6 | C19—C20—H20A | 109.5 |
C11—C12—C13 | 112.25 (14) | Br1—C20—H20A | 109.5 |
C11—C12—H12A | 109.2 | C19—C20—H20B | 109.5 |
C13—C12—H12A | 109.2 | Br1—C20—H20B | 109.5 |
C11—C12—H12B | 109.2 | H20A—C20—H20B | 108.1 |
C13—C12—H12B | 109.2 | ||
C8—N1—C1—C2 | −179.95 (16) | C9—N1—C8—O2 | −1.9 (3) |
C9—N1—C1—C2 | 3.8 (3) | C1—N1—C8—C7 | 1.52 (17) |
C8—N1—C1—C6 | −1.14 (19) | C9—N1—C8—C7 | 177.72 (14) |
C9—N1—C1—C6 | −177.41 (14) | O1—C7—C8—O2 | −1.5 (3) |
C6—C1—C2—C3 | 1.6 (3) | C6—C7—C8—O2 | 178.29 (16) |
N1—C1—C2—C3 | −179.68 (16) | O1—C7—C8—N1 | 178.80 (15) |
C1—C2—C3—C4 | −1.3 (3) | C6—C7—C8—N1 | −1.37 (16) |
C2—C3—C4—C5 | 0.1 (3) | C8—N1—C9—C10 | −101.92 (18) |
C3—C4—C5—C6 | 0.8 (3) | C1—N1—C9—C10 | 73.83 (19) |
C4—C5—C6—C1 | −0.5 (3) | N1—C9—C10—C11 | −172.10 (13) |
C4—C5—C6—C7 | 179.77 (18) | C9—C10—C11—C12 | 179.03 (14) |
C2—C1—C6—C5 | −0.8 (3) | C10—C11—C12—C13 | −177.09 (15) |
N1—C1—C6—C5 | −179.66 (15) | C11—C12—C13—C14 | 178.41 (15) |
C2—C1—C6—C7 | 179.05 (15) | C12—C13—C14—C15 | 178.72 (16) |
N1—C1—C6—C7 | 0.16 (18) | C13—C14—C15—C16 | 177.83 (17) |
C5—C6—C7—O1 | 0.3 (3) | C14—C15—C16—C17 | 176.30 (16) |
C1—C6—C7—O1 | −179.48 (17) | C15—C16—C17—C18 | 178.65 (16) |
C5—C6—C7—C8 | −179.49 (18) | C16—C17—C18—C19 | 174.02 (16) |
C1—C6—C7—C8 | 0.71 (16) | C17—C18—C19—C20 | −178.23 (16) |
C1—N1—C8—O2 | −178.14 (16) | C18—C19—C20—Br1 | −70.41 (19) |
Cg2 is the centroid of the C1–C6 benzene ring. |
D—H···A | D—H | H···A | D···A | D—H···A |
C2—H2···O2i | 0.95 | 2.56 | 3.441 (2) | 154 |
C3—H3···O1ii | 0.95 | 2.51 | 3.271 (2) | 137 |
C5—H5···O1iii | 0.95 | 2.51 | 3.424 (2) | 160 |
C9—H9A···O2i | 0.99 | 2.60 | 3.503 (2) | 152 |
C20—H20A···O2iv | 0.99 | 2.47 | 3.393 (2) | 156 |
C20—H20B···Cg2v | 0.99 | 2.96 | 3.756 (2) | 139 |
Symmetry codes: (i) x, −y+3/2, z−1/2; (ii) x, −y+1/2, z−1/2; (iii) −x+2, y−1/2, −z+5/2; (iv) −x+1, −y+2, −z+1; (v) −x+1, −y+1, −z+1. |
Bonds/angles | X-ray | B3LYP/6-311G(d,p) |
Br1-C20 | 1.9593 (18) | 2.001 |
O1-C7 | 1.2064 (19) | 1.2341 |
O2-C8 | 1.214 (2) | 1.236 |
N1-C8 | 1.3595 (19) | 1.391 |
N1-C1 | 1.4113 (19) | 1.417 |
N1-C9 | 1.4593 (19) | 1.465 |
C8-N1-C1 | 111.16 (12) | 110.94 |
C8-N1-C9 | 125.20 (13) | 124.87 |
C1-N1-C9 | 123.53 (13) | 122.98 |
C2-C1-C6 | 122.08 (14) | 122.69 |
C2-C1-N1 | 127.01 (14) | 128.00 |
C19-C20-Br1 | 110.79 (13) | 110.97 |
Molecular Energy (a.u.) (eV) | Compound (I) |
Total Energy TE (eV) | -96820.71 |
EHOMO (eV) | -6.62 |
ELUMO (eV) | -3.05 |
Gap ΔE (eV) | 3.57 |
Dipole moment µ (Debye) | 5.14 |
Ionisation potential I (eV) | 6.62 |
Electron affinity A | 3.05 |
Electronegativity χ | -4.83 |
Hardness η | -1.78 |
Softness σ | -0.56 |
Electrophilicity index ω | -6.53 |
Funding information
The support of NSF–MRI grant No. 1228232 for the purchase of the diffractometer and Tulane University for support of the Tulane Crystallography Laboratory are gratefully acknowledged. TH is grateful to Hacettepe University Scientific Research Project Unit (grant No. 013 D04 602 004).
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