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Synthesis and crystal structures of two related Co and Mn complexes: a celebration of collaboration between the universities of Dakar and Southampton

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aNational Crystallography Service (NCS), Department of Chemistry, University of Southampton, SO17 1BJ, United Kingdom, and bLaboratoire de Chimie de Coordination Organique (LCCO), Department of Chemistry, University of Dakar, PB 5005 Dakar, Senegal
*Correspondence e-mail: S.J.Coles@soton.ac.uk

Edited by J. Ellena, Universidade de Sâo Paulo, Brazil (Received 24 October 2023; accepted 9 November 2023; online 16 November 2023)

This article is part of a collection of articles to commemorate the founding of the African Crystallographic Association and the 75th anniversary of the IUCr.

We report the synthesis and structures of two transition-metal complexes involving 2-(2-hy­droxy­phen­yl)benzimidazole (2hpbi – a ligand of inter­est for its photoluminescent applications), with cobalt, namely, bis­[μ-2-(1H-1,3-benzo­diazol-2-yl)phenolato]bis­[ethanol(thio­cyanato)­cobalt(II)], [Co2(C13H9N2O)2(NCS)2(C2H6O)2], (1), and manganese, namely, bis­[μ-2-(1H-1,3-benzo­diazol-2-yl)phenolato]bis­{[2-(1H-1,3-benzo­diazol-2-yl)phenolato](thio­cyanato)­mang­an­ese(III)} dihydrate, [Mn2(C13H9N2O)4(NCS)2]·2H2O, (2). These structures are two recent examples of a fruitful collaboration between researchers at the Laboratoire de Chimie de Coordination Organique/Organic Coordination Chemistry Laboratory (LCCO), University of Dakar, Senegal and the National Crystallography Service (NCS), School of Chemistry, University Southampton, UK. This productive partnership was forged through meeting at Pan-African Conferences on Crystallography and quickly grew as the plans for the AfCA (African Crystallographic Association) developed. This article therefore also showcases this productive partnership, in celebration of the IUCr's 75 year anniversary and the recent inclusion of AfCA as a Regional Associate of the IUCr.

1. Chemical context

One of the conclusions from the Pan African Summit meeting (15–17th October 2014, University of the Free State, Bloemfontein, South Africa; Roodt et al., 2014[Roodt, A., Zema, M. & International Union of Crystallography (2014). IUCr Newsl. https://www.iucr.org/news/newsletter/etc/legacy-αrticles?issue=95273&result_138864_result_page=6]) held during the Inter­national Year of Crystallography, IYCr2014, was the lack of convenient crystallographic facilities across the continent. It was also recognised that crystallography is not well developed or studied in most of Africa and that opportunities for crystallographic researchers to inter­act with each other, as well as to those outside of the continent, are sparse. As a result, teaching activities are quite rare and the chance to develop new skills, competencies and capabilities, remained low.

To foster the progress of both practical and theoretical expertise within and around crystallography, programmes such as the IUCr Crystallography in Africa Initiative (Lecomte et al., 2014[Lecomte, C., Van Meervelt, L., Ngome, J. P., Roodt, A., Thalal, A., Merazig, H., Kenfack, P., Murenzi, R., Zema, M. & International Union of Crystallography (2014). Crystallography in Africa. https://www.iucr.org/iucr/sponsorship/crystallography-in-africa]) aim to promote and develop crystallography (both teaching and research), throughout the continent. A primary goal is to create and support the operation of at least one national crystallography centre per country, ultimately to enable each of these to become independent hub of research in fields related to crystallography and the structural sciences. As part of the Inter­national Year of Crystallography activities, the IUCr–UNESCO OpenLab network was launched. This was a global activity to provide a network of functioning laboratories across developing nations, thereby enabling access to crystallographic instrumentation to a much broader range of researchers. In Africa, OpenLab was operated within the framework of the IUCr Crystallography in Africa initiative and acted as a starting point for a much wider range of researchers to fully engage with crystallographic experimentation.

Establishing the first Pan-African Crystallography Conference (PCCr1: Dschang, Cameroon, 2016) was a notable milestone towards the goal of coalescing crystallography-based research in Africa. In fact, its successes went much further than this, placing African crystallography on the world stage and attracting a notable number of delegates from further afield. Of particular success was the promotion of networking between delegates, both from within Africa and to those attending from all around the world. Subsequently PCCr2 and PCCr3 have been held in Accra, Ghana (2019) and Nairobi, Kenya (2023), respectively, have built on the platform established by PCCr1, resulting in far greater mobility, collaboration and empowerment for African crystallographers.

The Laboratoire de Chimie de Coordination Organique (LCCO) is a research unit linked to the Department of Chemistry at the University of Dakar, Senegal. It opened in 1995, under the guidance of Prof. Abdou Salam Sall (the former Rector of the University of Dakar) and Prof. Mohamed Lamine Gaye with a focus on structural chemistry, inorganic chemical synthesis, anti­oxidant activity, X-ray diffraction and spectroscopic characterization. Since its inception, over 20 students have successfully completed their PhD programs. It also continues to ramp up its research capacity, by expanding its complement of staff, both locally and with some based at other universities within Senegal. This expansion reflects the wider University strategy, which has seen the University of Dakar being declared the best university in Francophone Sub-Saharan Africa and the top-rated higher education institution in Senegal (by several independent online metric-based ranking sites, such as edurank.org, webmetrics.info etc.).

Over its 40+ year history (Hursthouse et al., 2014[Hursthouse, M. B. & Coles, S. J. (2014). Crystallogr. Rev. 20, 117-154.]), the National Crystallography Service (NCS) has provided access, primarily for UK researchers, to advanced crystallographic facilities and expertise to support those lacking facilities or to those with very challenging samples. With a strong history championing and investing into diffraction technology innovations, the NCS supports users from a wide variety of disciplines from over 30 different academic institutions in addition to several commercial clients. It also holds several teaching and outreach events each year, to promote science in general, and crystallography in particular. It is therefore well-placed to contribute (in part) to the development of African crystallography, by making some of these opportunities available. NCS has therefore been very fortunate to be involved in some of the significant development activities and has relished the opportunities that have since arisen, to collaborate closely with a range of new colleagues across Africa.

Although a connection had already been made, a strong collaboration between the LCCO and the NCS grew out of meeting face-to-face at PCCr2. Later in 2019, Dr Thiam undertook a two-week secondment to the NCS in Southampton, which cemented the basis of the collaboration. This visit was a valuable training opportunity covering crystallographic instrumentation and software, sample selection and handling, screening, collection strategy, data processing, structure solution and publication preparation. During the visit, over 20 full datasets were collected. This activity enabled considerable knowledge transfer to LCCO and subsequently, more than 70 further sample analyses have been successfully completed. Many novel and inter­esting structures have been characterized and have resulted in eleven joint publications in a range of journals, between 2018 and 2023 (Gaye et al., 2018, 2020[Gaye, M., Seck, T. M., Faye, D. F., Gaye, A. A., Thiam, E. I., Diouf, O., Orton, J. B. & Coles, S. J. (2020). IOSR-JAC, 11, 31-39.]; Gaye, Fall et al., 2023[Gaye, M., Fall, N., Traore, B., Ndiaye-Gueye, M., Diouf, O., Thiam, E. I., Orton, J. B. & Coles, S. J. (2023). Sci. J. Chem. 11, 18-25.]; Gaye, Sarr et al., 2023[Gaye, M., Sarr, M., Traoré, B., Thiam, E. I., Diouf, O., Orton, J. B. & Coles, S. J. (2023). IOSR-JAC, 16, 01-07.]; Gaye, Ndoye et al., 2021[Gaye, M., Ndoye, C., Diome, B., Sow, M. M., Gaye, P. H., Thiam, E. I., Diouf, O., Excoffier, G., Orton, J. B. & Coles, S. J. (2021). IOSR-JAC, 7, 01-16.]; Gaye, Kebe et al., 2021[Gaye, M., Kebe, M., Diop, A., Thiam, E. I., Mbossé, N.-G., Retailleau, P., Orton, J. B. & Coles, S. J. (2021). IOSR-JAC, 12, 04-15.]; Sokhna et al., 2023[Sokhna, S., Seck, I., Thiam, I. E. H., Presset, M., Ndoye, S. F., Ba, L. A., Samb, I., Coles, S., Orton, J., Seck, M., Le Gall, E. & Gaye, M. (2023). Acta Cryst. E79, 74-78.]); Diallo et al., 2022[Diallo, A. S., Thiam, I. E., Gueye-Ndiaye, M., Dieng, M., Orton, J., Simon, C. & Gaye, M. (2022). Acta Cryst. E78, 349-353.]; Diop et al., 2019[Diop, A., Sarr, M., Diop, M., Thiam, I. E., Barry, A. H., Coles, S., Orton, J. B. & Gaye, M. (2019). Transit. Met. Chem. 44, 415-423.]; Faye et al., 2020[Faye, F., Sylla-Gueye, R., Elhadji Thiam, I., Orton, J., Coles, S. & Gaye, M. (2020). Sci. J. Chem. 8, 131-135.]; Sarr et al., 2018[Sarr, M., Diop, M., Thiam, E. I., Gaye, M., Barry, A. H., Orton, J. B. & Coles, S. J. (2018). Acta Cryst. E74, 1862-1866.]; Sylla-Gueye et al., 2020[Sylla-Gueye, R., Thiam, I. E., Orton, J., Coles, S. & Gaye, M. (2020). Acta Cryst. E76, 660-663.]). Recent samples originated from more than a dozen current doctoral students from within the LCCO itself, the wider Department of Chemistry or from two additional joint projects with the University of Bambey, Senegal and Gaston Berger University of Saint-Louis, Senegal.

The volume of crystal structures being produced via this collaboration is significant, particularly for an African-based group. This means it is not possible, or necessary, to publish all these in the primary literature. Accordingly, we have made over 20 CSD Communications (see https://www.ccdc.cam.ac.uk/community/access-deposit-structures/deposit-a-structure/csd-communications/), as part of an ongoing exercise.

2-(2-Hy­droxy­phen­yl)benzimidazoles are of inter­est for their photoluminescence properties and how the optical properties are effected by chelation to various metal centres has been previously reported (Zheng et al., 2003[Zheng, S. L., Zhang, J. P., Chen, X. M., Huang, Z.-L., Lin, Z.-Y. & Wong, W.-T. (2003). Chem. Eur. J. 9, 3888-3896.]; Tong et al., 2005a[Tong, Y., Zheng, S. & Chen, X. (2005a). Eur. J. Inorg. Chem. pp. 3734-3741.],b[Tong, Y. P., Zheng, S. L. & Chen, X. M. (2005b). Inorg. Chem. 44, 4270-4275.]). Exploration of these systems, particularly how the choice of metal centre and how modification of the coordination sphere may effect both crystal packing and the photoluminescence response, is of ongoing inter­est. Herein we report two recent structures resulting from this study.

[Scheme 1]

2. Structural commentary

Complex 1 is a Z = 0.5 structure in P21/c, comprised of a discrete μ2 oxo-bridged bi-nuclear complex of CoII ions [Co⋯Co = 3.1326 (6) Å], with each metal centre being five-coordinate (trigonal bipyramidal), with a trigonality (or Addison) index of τ = 0.82 (Addison et al., 1984[Addison, A. W., Rao, T. N., Reedijk, J., van Rijn, J. & Verschoor, G. C. (1984). J. Chem. Soc. Dalton Trans. pp. 1349-1356.]) denoting a slight deformation away from an idealized geometry (further details given in the supporting information). Their coordination spheres (related through an inversion centre), include one SCN, one EtOH and a 2hpbi ligand, through its N1 and O1 (bridging) atoms, as shown in Fig. 1[link].

[Figure 1]
Figure 1
Bi-nuclear CoII complex of 1, ellipsoids shown at 50% probability.

Similarly, 2 is also a Z = 0.5 structure, although in this case in the space group C2/c. The complex also comprises a discrete μ2 oxo-bridged bi-nuclear complex; however, the metal centres have undergone oxidation (during formation, in air), from MnII to MnIII [Mn⋯Mn = 3.3769 (7) Å]. Both Mn ions are six-coordinate (octa­hedral) and their coordination spheres are related by rotational symmetry. Each MnIII coordinates to one SCN and two 2hpbi ligands, one via atoms N1 and O1 (bridging) and the other through atoms N3 and O2 (Fig. 2[link]).

[Figure 2]
Figure 2
Bi-nuclear MnIII complex of 2, ellipsoids shown at 50% probability and with symmetry-equivalent atoms ghosted.

3. Supra­molecular features

Packing in 1 is directed by a 2-D network of N—H⋯S and O—H⋯S hydrogen bonds (Table 1[link]), depicted in Fig. 3[link]. Comparison with similar examples (CSD-Materials – CSD v5.44, Apr 2023; Macrae et al., 2020[Macrae, C. F., Sovago, I., Cottrell, S. J., Galek, P. T. A., McCabe, P., Pidcock, E., Platings, M., Shields, G. P., Stevens, J. S., Towler, M. & Wood, P. A. (2020). J. Appl. Cryst. 53, 226-235.]) confirmed that these inter­actions were typical of their type (summarized in S1; for further details, see supporting information section SI-1).

Table 1
Hydrogen-bond geometry (Å, °) for 1[link]

D—H⋯A D—H H⋯A DA D—H⋯A
N2—H2⋯S1i 0.78 (3) 2.63 (3) 3.3843 (17) 162 (2)
O2—H2A⋯S1ii 0.84 (3) 2.42 (3) 3.2498 (15) 174 (2)
Symmetry codes: (i) [-x+1, -y+1, -z+1]; (ii) [x-1, y, z].
[Figure 3]
Figure 3
Hydrogen-bonding network within 1, ellipsoids shown at 50% probability.

Analysis of the Hirshfeld surface and associated fingerprint plots (Spackman et al., 2021[Spackman, P. R., Turner, M. J., McKinnon, J. J., Wolff, S. K., Grimwood, D. J., Jayatilaka, D. & Spackman, M. A. (2021). J. Appl. Cryst. 54, 1006-1011.]) of complex 1 provide further evidence for these contacts. Fig. 4[link] shows the Hirshfeld surface mapped over dnorm (normalized contact distance) in the range −0.4413 Å (red) to 1.4142 Å (blue), where donors and acceptors of these contacts are the bright-red areas. Two-dimensional fingerprint plots are shown in Fig. 5[link], with characteristic sharp features arising from hydrogen bonding being present.

[Figure 4]
Figure 4
Hirshfeld surfaces for 1 mapped over dnorm in the range −0.44 Å (red) to 1.41 Å (blue).
[Figure 5]
Figure 5
Two-dimensional fingerprint plots of 1.

The contacts directing the crystal packing in 2 identified a more complex mixture of hydrogen bonds: O—H⋯O and O—H⋯N involving the included solvent water and an N—H⋯S contact, of type similar to that seen in 1. These collectively form a 1D chain-like array, Fig. 6[link], summarized in Table 2[link] and with further details in supporting information section SI-2.

Table 2
Hydrogen-bond geometry (Å, °) for 2[link]

D—H⋯A D—H H⋯A DA D—H⋯A
N2—H2⋯O3i 0.85 (2) 2.11 (2) 2.893 (3) 152 (2)
N4—H4A⋯S1ii 0.85 (2) 2.64 (2) 3.4147 (19) 152 (2)
O3—H3A⋯O2 0.83 (4) 2.17 (4) 2.987 (2) 173 (3)
O3—H3B⋯S1iii 0.89 (4) 2.94 (4) 3.799 (2) 163 (3)
Symmetry codes: (i) [-x+1, -y+1, -z+1]; (ii) [-x+1, -y, -z+1]; (iii) [-x+1, y, -z+{\script{1\over 2}}].
[Figure 6]
Figure 6
Hydrogen bonding network within 2, ellipsoids shown at 50% probability.

Fig. 7[link] shows the Hirshfeld surface of complex 2, mapped over dnorm range −0.4884 Å (red) to 1.5602 Å (blue), again highlighting the hydrogen bonding present. Two-dimensional fingerprint plots are shown in Fig. 8[link], which, when compared to similar contacts in the CSD, provide further insight into the crystal packing. The strongest and sharpest features corres­pond to the O—H⋯O(water) contacts, which are now both the strongest hydrogen-bond donor and acceptor in the structure. The N—H⋯S features are noticeably weaker than in structure 1, reflected in both its relative lengthening (0.3 Å) and being further perturbed from a linear geometry (163 to 152°).

[Figure 7]
Figure 7
Hirshfeld surfaces for 2 mapped over dnorm in the range −0.49 Å (red) to 1.56 Å (blue).
[Figure 8]
Figure 8
Two-dimensional fingerprint plots of 2.

Also of minor note, the second hydrogen (H3B) of the solvent water (containing O3) is orientated towards atom S1 of an adjacent complex as though to form a hydrogen bond. The distance, however (3.8 Å), is much longer than the bulk of comparable contacts in the CSD (3.2–3.4 Å) and its position is simply optimized for steric packing.

4. Database survey

A CSD search (v5.44, Apr 2023; Groom et al., 2016[Groom, C. R., Bruno, I. J., Lightfoot, M. P. & Ward, S. C. (2016). Acta Cryst. B72, 171-179.]) for complexes involving the (unfunctionalized) 2hpbi ligand returned 69 hits, nine of which are coordinated by Co or Mn and none containing thio­cyanates. Eight of these Co or Mn complex species consist of a single metal centre, with the remaining structure, PULGUZ (Duan et al., 2010[Duan, M., Li, J., Xi, Y., Lü, X.-F., Liu, J.-Z., Mele, G. & Zhang, F.-X. (2010). J. Coord. Chem. 63, 90-98.]), forming a bi-nuclear complex, though quite dissimilar in structure to 2. PULGUZ contains two six-coordinate MnIV centres, each chelated by two 2hpbi ligands then bridged by two O2− ions [Mn⋯Mn = 2.7772 (9) Å].

5. Synthesis and crystallisation

The 2hpbi ligand, [2-(1H-benzimidazol-2-yl)phenol (C13H10N2O)], prepared by the slow addition (∼2 h, via dropping funnel) of 2-hy­droxy­benzaldehyde (30mmol, in ethanol) into a flask containing ortho­phenyldi­amine (30mmol, in ethanol), in the presence of few drops of glacial acetic acid. On cooling, no precipitate was observed and the reaction mixture was evaporated to dryness, to give a yellow oil. A yellow precipitate was obtained on the addition of diethyl ether, which was separated and thoroughly washed with further ether, then dried over P4O10. FT–IR and NMR spectra for the 2hpbi ligand are consistent to those reported (values below, further details in supporting information section SI-3), yield 93%.

FT–IR (ν, cm-1): (C=N) 1605, (C—O) 1278, (OH) 3431, (NH) 3344, (C=C)ar 1528, 1460, 1489. 1H NMR (300 MHz, δ (ppm), Acetone-d6): 7.85 (s, 1H, –NH), 7.82 (s, 1H, –OH), 6,91–7.51 (m, 8H, Har). 13C NMR (75 MHz, δ (ppm), Acetone-d6): 205.93 (C-11), 159.79 (C-8), 152.88 (C-4 & C-5), 132.56 (C-13 & C-15), 126.52 (C-1 & C-2), 123.86 (C-14), 119.82 (C-3 & C-12), 118.28 (C-6), 113.48 (C-10). 13C NMR DEPT-135 (75 MHz, δ (ppm), Acetone-d6) disappearance of signals: 205.93 (C-11), 159.79 (C-8), 152.88 (C-4 et C-5), 113.48 (C-10).

Crystallization from ethanol and slow evaporation led to the formation of crystals suitable for single crystal X-ray diffraction, after ∼1 week. Transition-metal complexes 1 and 2 were synthesized by first suspending the respective metal salt: CoCl2·2H2O (0.042g, 0.25mmol) or MnCl2·2H2O (0.040g, 0.25mmol) with NH4SCN (0.038g, 0.5mmol) in ethanol (and a few drops of water). These mixtures were then filtered and added to ethanol solutions of ligand 2-(1H-benzimidazol-2-yl)phenol (0.053g, 0.25mmol), subsequently stirred for 1 h, then filtered and allowed to slowly evaporate (1 week). In both cases, crystals suitable for scXRD were produced, dark-red crystals of the cobalt complex 1 (m.p. = 495 K) and pale-brown crystals of the manganese complex 2 (m.p. > 533 K). Crystallographic analysis identified 1 as the complex [Co2(C13H9N2O)2(NSC)2(CH3CH2OH)2] and 2 as the complex [Mn2(C13H9N2O)4(NSC)2]·2H2O.

6. Refinement

Details of the crystal data, data collection and structure refinement are summarized in Table 3[link].

Table 3
Experimental details

  1 2
Crystal data
Chemical formula [Co2(C13H9N2O)2(NCS)2(C2H6O)2] [Mn2(C13H9N2O)4(NCS)2]·2H2O
Mr 744.60 1098.96
Crystal system, space group Monoclinic, P21/c Monoclinic, C2/c
Temperature (K) 100 100
a, b, c (Å) 7.74843 (10), 19.2895 (3), 10.69753 (11) 21.8914 (6), 16.3110 (4), 13.5260 (4)
β (°) 93.3777 (10) 100.163 (2)
V3) 1596.11 (4) 4754.0 (2)
Z 2 4
Radiation type Cu Kα Cu Kα
μ (mm−1) 9.76 5.69
Crystal size (mm) 0.12 × 0.1 × 0.1 0.07 × 0.05 × 0.02
 
Data collection
Diffractometer Rigaku 007HF diffractometer with HF Varimax confocal mirrors, an UG2 goniometer and HyPix Arc-100 detector Rigaku 007HF diffractometer with HF Varimax confocal mirrors, an UG2 goniometer and HyPix Arc-100 detector
Absorption correction Analytical (CrysAlis PRO; Rigaku OD, 2023[Rigaku OD (2023). CrysAlis PRO. Rigaku Oxford Diffraction, Yarnton, England.]) Gaussian (CrysAlis PRO; Rigaku OD, 2023[Rigaku OD (2023). CrysAlis PRO. Rigaku Oxford Diffraction, Yarnton, England.])
Tmin, Tmax 0.785, 0.826 0.940, 1.000
No. of measured, independent and observed [I > 2σ(I)] reflections 46610, 3248, 3113 34537, 4776, 3991
Rint 0.037 0.043
 
Refinement
R[F2 > 2σ(F2)], wR(F2), S 0.029, 0.079, 1.08 0.039, 0.107, 1.05
No. of reflections 3248 4776
No. of parameters 215 346
No. of restraints 0 2
H-atom treatment H atoms treated by a mixture of independent and constrained refinement H atoms treated by a mixture of independent and constrained refinement
Δρmax, Δρmin (e Å−3) 0.32, −0.47 1.24, −0.48
Computer programs: CrysAlis PRO (Rigaku OD, 2023[Rigaku OD (2023). CrysAlis PRO. Rigaku Oxford Diffraction, Yarnton, England.]), SHELXT2018/2 (Sheldrick, 2015a[Sheldrick, G. M. (2015a). Acta Cryst. A71, 3-8.]), SHELXT2018/2 (Sheldrick, 2015b[Sheldrick, G. M. (2015b). Acta Cryst. C71, 3-8.]), SHELXL2018/3 (Sheldrick, 2015b[Sheldrick, G. M. (2015b). Acta Cryst. C71, 3-8.]), SHELXL2018/3 (Sheldrick, 2015a[Sheldrick, G. M. (2015a). Acta Cryst. A71, 3-8.]) and OLEX2 (Dolomanov et al., 2009[Dolomanov, O. V., Bourhis, L. J., Gildea, R. J., Howard, J. A. K. & Puschmann, H. (2009). J. Appl. Cryst. 42, 339-341.]).

Diffraction data were collected using a Rigaku 007HF diffractometer with graphite monochromatized Cu Kα radiation equipped with Varimax confocal mirrors, a UG2 Universal goniometer, a HyPix Arc-100 detector and an Oxford Cryosystems low-temperature device operating at 100 (2) K. Cell parameters, collection strategy, data reduction (corrected for Lorentz and polarization effects), data integration and adsorption corrections were performed using CrysAlis PRO v1.171.42.80a (Rigaku OD, 2023[Rigaku OD (2023). CrysAlis PRO. Rigaku Oxford Diffraction, Yarnton, England.]). The structure was solved with the SHELXT2018/2 (Sheldrick, 2015a[Sheldrick, G. M. (2015a). Acta Cryst. A71, 3-8.]) solution program using dual methods within the OLEX2 1.5 suite of programs (Dolomanov et al. 2009[Dolomanov, O. V., Bourhis, L. J., Gildea, R. J., Howard, J. A. K. & Puschmann, H. (2009). J. Appl. Cryst. 42, 339-341.]). The model was refined with SHELXL2018/3 (Sheldrick, 2015b[Sheldrick, G. M. (2015b). Acta Cryst. C71, 3-8.]) using full-matrix least-squares minimization on F2.

C-bound H atoms were positioned geometrically (0.95–0.98 Å) and refined as riding with Uiso(H) = 1.2Ueq(C). Other H atoms were refined with Uiso(H) = 1.2Ueq(N) or 1.5Ueq(O). In 2, the restraint N2—H2 = N4—H4A = 0.88±(2) Å was applied.

7. Reflections and Future Work

This collaboration between the universities of Dakar and Southampton is just one of the many ways in which the initiatives promoting crystallography and related fields across African nations are helping to raise the profile of African research. The number of new compounds and crystals produced by LCCO is impressive and the value of these outputs are greatly increased via access to crystallographic facilities. The benefits for both institutions are clear when considering the number of new crystal structures generated and that the publication rate averages over two articles per year. The NCS benefits from a number of such collaborations, most of which have stemmed from networking at Pan-African conferences and related events and so we encourage researchers from outside the continent to attend these and engage with the wealth of science being conducted. The outputs from projects supported by the collaboration and the secondment to Southampton both contributed strongly to the recent promotion of Dr Thiam to the rank of Professor.

Finally, the NCS is launching a service for single-crystal structure analysis by Electron Diffraction to complement its established state-of-the-art X-ray facilities. This technique is on the verge of becoming more routine and provides many opportunities for new structural chemistry research and the ability to examine nanocrystals not only extends the capabilities of X-rays, but also opens up our technique to areas of chemistry that could not previously benefit. The NCS is currently exploring routes by which it can make these capabilities available to colleagues in Africa.

Supporting information


Computing details top

Bis[µ-2-(1H-1,3-benzodiazol-2-yl)phenolato]bis[ethanol(thiocyanato)cobalt(II)] (Struct-1) top
Crystal data top
[Co2(C13H9N2O)2(NCS)2(C2H6O)2]F(000) = 764
Mr = 744.60Dx = 1.549 Mg m3
Monoclinic, P21/cCu Kα radiation, λ = 1.54178 Å
a = 7.74843 (10) ÅCell parameters from 12655 reflections
b = 19.2895 (3) Åθ = 4.6–74.2°
c = 10.69753 (11) ŵ = 9.76 mm1
β = 93.3777 (10)°T = 100 K
V = 1596.11 (4) Å3(cut) block, dark_red
Z = 20.12 × 0.1 × 0.1 mm
Data collection top
Rigaku 007HF
diffractometer with HF Varimax confocal mirrors, an UG2 goniometer and HyPix Arc-100 detector
3248 independent reflections
Radiation source: Rotating anode, Rigaku 007 HF3113 reflections with I > 2σ(I)
HF Varimax focusing mirrors monochromatorRint = 0.037
Detector resolution: 10 pixels mm-1θmax = 74.5°, θmin = 4.6°
profile data from ω–scansh = 99
Absorption correction: analytical
(CrysAlisPro; Rigaku OD, 2023)
k = 2424
Tmin = 0.785, Tmax = 0.826l = 139
46610 measured reflections
Refinement top
Refinement on F2Primary atom site location: dual
Least-squares matrix: fullHydrogen site location: mixed
R[F2 > 2σ(F2)] = 0.029H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.079 w = 1/[σ2(Fo2) + (0.0428P)2 + 1.1982P]
where P = (Fo2 + 2Fc2)/3
S = 1.08(Δ/σ)max = 0.001
3248 reflectionsΔρmax = 0.32 e Å3
215 parametersΔρmin = 0.47 e Å3
0 restraints
Special details top

Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/Ueq
C10.3063 (2)0.52949 (10)0.66344 (16)0.0155 (3)
C20.2850 (2)0.59244 (9)0.73665 (16)0.0162 (3)
C30.3522 (2)0.59966 (9)0.86219 (16)0.0160 (3)
C40.3285 (2)0.66357 (10)0.92215 (17)0.0191 (4)
H40.3747180.6695941.0056960.023*
C50.2404 (3)0.71778 (10)0.86349 (18)0.0214 (4)
H50.2258740.7601340.9069710.026*
C60.1726 (3)0.71056 (10)0.74058 (19)0.0243 (4)
H60.1116570.7476970.6997980.029*
C70.1954 (3)0.64873 (10)0.67909 (17)0.0205 (4)
H70.1493540.6438860.5952680.025*
C80.3772 (2)0.42614 (10)0.60066 (16)0.0160 (3)
C90.2867 (2)0.45834 (9)0.49991 (17)0.0171 (4)
C100.2497 (3)0.42482 (10)0.38593 (17)0.0221 (4)
H100.1877680.4471690.3180400.027*
C110.3079 (3)0.35727 (11)0.37699 (18)0.0240 (4)
H110.2849630.3324790.3010940.029*
C120.4001 (3)0.32444 (10)0.47743 (18)0.0218 (4)
H120.4390850.2781800.4674810.026*
C130.4355 (2)0.35798 (10)0.59071 (17)0.0198 (4)
H130.4969740.3355300.6587030.024*
C140.8273 (2)0.40481 (9)0.76185 (17)0.0172 (4)
C150.2158 (3)0.35669 (11)1.00665 (18)0.0237 (4)
H15A0.3044620.3444541.0734360.028*
H15B0.1456700.3147810.9869000.028*
C160.1014 (3)0.41258 (12)1.05322 (19)0.0273 (4)
H16A0.0119580.4240870.9879510.041*
H16B0.1708350.4539161.0740400.041*
H16C0.0467440.3962711.1281120.041*
Co10.48673 (4)0.45310 (2)0.88029 (3)0.01554 (10)
N10.38704 (19)0.47189 (8)0.70165 (14)0.0156 (3)
N20.2446 (2)0.52316 (8)0.54190 (14)0.0172 (3)
H20.191 (3)0.5513 (13)0.504 (2)0.021*
N30.7117 (2)0.41951 (9)0.82031 (15)0.0208 (3)
O10.43735 (17)0.54921 (6)0.92620 (12)0.0176 (3)
O20.30061 (18)0.37837 (7)0.89578 (13)0.0216 (3)
H2A0.226 (4)0.3794 (14)0.836 (3)0.032*
S10.99084 (6)0.38539 (2)0.67772 (4)0.01919 (12)
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
C10.0154 (8)0.0185 (8)0.0126 (8)0.0021 (7)0.0002 (6)0.0019 (7)
C20.0166 (8)0.0154 (8)0.0164 (8)0.0003 (7)0.0000 (7)0.0007 (7)
C30.0166 (8)0.0152 (8)0.0162 (8)0.0002 (6)0.0000 (7)0.0018 (6)
C40.0212 (9)0.0185 (9)0.0172 (9)0.0007 (7)0.0031 (7)0.0008 (7)
C50.0256 (10)0.0163 (9)0.0219 (9)0.0016 (7)0.0017 (7)0.0016 (7)
C60.0303 (10)0.0183 (9)0.0234 (10)0.0054 (8)0.0046 (8)0.0026 (7)
C70.0240 (9)0.0204 (9)0.0165 (9)0.0033 (7)0.0042 (7)0.0019 (7)
C80.0156 (8)0.0187 (9)0.0136 (8)0.0021 (7)0.0016 (6)0.0006 (7)
C90.0190 (9)0.0174 (9)0.0151 (9)0.0020 (7)0.0010 (7)0.0006 (7)
C100.0294 (10)0.0232 (10)0.0133 (8)0.0015 (8)0.0019 (7)0.0004 (7)
C110.0325 (11)0.0232 (10)0.0163 (9)0.0036 (8)0.0006 (8)0.0044 (7)
C120.0258 (10)0.0179 (9)0.0217 (9)0.0007 (7)0.0024 (7)0.0030 (7)
C130.0206 (9)0.0197 (9)0.0189 (9)0.0003 (7)0.0001 (7)0.0011 (7)
C140.0187 (9)0.0169 (8)0.0154 (8)0.0011 (7)0.0042 (7)0.0021 (7)
C150.0244 (10)0.0276 (10)0.0192 (9)0.0038 (8)0.0018 (7)0.0051 (8)
C160.0238 (10)0.0365 (12)0.0213 (9)0.0016 (9)0.0011 (8)0.0031 (8)
Co10.01633 (16)0.01559 (16)0.01441 (16)0.00107 (11)0.00140 (11)0.00038 (10)
N10.0162 (7)0.0163 (7)0.0141 (7)0.0007 (6)0.0006 (6)0.0006 (6)
N20.0224 (8)0.0152 (7)0.0137 (7)0.0009 (6)0.0029 (6)0.0022 (6)
N30.0196 (8)0.0241 (8)0.0184 (8)0.0017 (6)0.0019 (6)0.0021 (6)
O10.0216 (7)0.0160 (6)0.0147 (6)0.0018 (5)0.0031 (5)0.0002 (5)
O20.0202 (7)0.0285 (7)0.0157 (6)0.0041 (6)0.0018 (5)0.0016 (5)
S10.0169 (2)0.0248 (2)0.0158 (2)0.00064 (16)0.00012 (16)0.00111 (16)
Geometric parameters (Å, º) top
C1—C21.460 (2)C11—H110.9500
C1—N11.328 (2)C11—C121.405 (3)
C1—N21.364 (2)C12—H120.9500
C2—C31.418 (2)C12—C131.387 (3)
C2—C71.410 (3)C13—H130.9500
C3—C41.407 (3)C14—N31.158 (3)
C3—O11.341 (2)C14—S11.6402 (19)
C4—H40.9500C15—H15A0.9900
C4—C51.380 (3)C15—H15B0.9900
C5—H50.9500C15—C161.499 (3)
C5—C61.394 (3)C15—O21.451 (2)
C6—H60.9500C16—H16A0.9800
C6—C71.378 (3)C16—H16B0.9800
C7—H70.9500C16—H16C0.9800
C8—C91.396 (3)Co1—N12.0509 (15)
C8—C131.396 (3)Co1—N32.0002 (17)
C8—N11.393 (2)Co1—O1i2.1189 (13)
C9—C101.395 (3)Co1—O11.9612 (13)
C9—N21.374 (2)Co1—O22.0527 (14)
C10—H100.9500N2—H20.78 (3)
C10—C111.384 (3)O2—H2A0.84 (3)
N1—C1—C2126.68 (16)C12—C13—H13121.4
N1—C1—N2110.54 (16)N3—C14—S1178.93 (18)
N2—C1—C2122.77 (16)H15A—C15—H15B107.9
C3—C2—C1122.87 (16)C16—C15—H15A109.3
C7—C2—C1118.34 (16)C16—C15—H15B109.3
C7—C2—C3118.79 (17)O2—C15—H15A109.3
C4—C3—C2117.86 (16)O2—C15—H15B109.3
O1—C3—C2123.68 (16)O2—C15—C16111.68 (17)
O1—C3—C4118.47 (16)C15—C16—H16A109.5
C3—C4—H4119.0C15—C16—H16B109.5
C5—C4—C3122.09 (17)C15—C16—H16C109.5
C5—C4—H4119.0H16A—C16—H16B109.5
C4—C5—H5119.9H16A—C16—H16C109.5
C4—C5—C6120.15 (18)H16B—C16—H16C109.5
C6—C5—H5119.9N1—Co1—O1i169.03 (6)
C5—C6—H6120.5N1—Co1—O288.36 (6)
C7—C6—C5119.01 (18)N3—Co1—N192.62 (6)
C7—C6—H6120.5N3—Co1—O1i96.29 (6)
C2—C7—H7119.0N3—Co1—O2115.34 (6)
C6—C7—C2122.09 (17)O1—Co1—N189.89 (6)
C6—C7—H7119.0O1—Co1—N3124.97 (6)
C9—C8—C13120.67 (17)O1—Co1—O1i79.76 (5)
N1—C8—C9108.59 (16)O1—Co1—O2119.68 (6)
N1—C8—C13130.70 (17)O2—Co1—O1i93.57 (5)
C10—C9—C8122.45 (17)C1—N1—C8106.74 (15)
N2—C9—C8105.70 (16)C1—N1—Co1125.41 (12)
N2—C9—C10131.81 (18)C8—N1—Co1127.66 (12)
C9—C10—H10121.8C1—N2—C9108.43 (16)
C11—C10—C9116.47 (18)C1—N2—H2125.3 (18)
C11—C10—H10121.8C9—N2—H2126.2 (18)
C10—C11—H11119.2C14—N3—Co1165.77 (15)
C10—C11—C12121.63 (18)C3—O1—Co1130.96 (11)
C12—C11—H11119.2C3—O1—Co1i127.89 (11)
C11—C12—H12119.2Co1—O1—Co1i100.24 (5)
C13—C12—C11121.55 (18)C15—O2—Co1128.51 (12)
C13—C12—H12119.2C15—O2—H2A108.1 (19)
C8—C13—H13121.4Co1—O2—H2A112.0 (19)
C12—C13—C8117.23 (17)
C1—C2—C3—C4177.94 (17)C9—C10—C11—C120.3 (3)
C1—C2—C3—O11.7 (3)C10—C9—N2—C1177.3 (2)
C1—C2—C7—C6178.60 (18)C10—C11—C12—C130.7 (3)
C2—C1—N1—C8179.32 (17)C11—C12—C13—C80.6 (3)
C2—C1—N1—Co15.4 (3)C13—C8—C9—C100.3 (3)
C2—C1—N2—C9179.57 (16)C13—C8—C9—N2178.22 (16)
C2—C3—C4—C51.2 (3)C13—C8—N1—C1177.78 (19)
C2—C3—O1—Co13.7 (3)C13—C8—N1—Co12.6 (3)
C2—C3—O1—Co1i170.47 (13)C16—C15—O2—Co167.7 (2)
C3—C2—C7—C60.6 (3)N1—C1—C2—C30.5 (3)
C3—C4—C5—C60.6 (3)N1—C1—C2—C7179.66 (18)
C4—C3—O1—Co1176.65 (13)N1—C1—N2—C90.3 (2)
C4—C3—O1—Co1i9.8 (2)N1—C8—C9—C10177.63 (18)
C4—C5—C6—C70.1 (3)N1—C8—C9—N20.3 (2)
C5—C6—C7—C20.1 (3)N1—C8—C13—C12177.49 (18)
C7—C2—C3—C41.2 (3)N2—C1—C2—C3178.64 (17)
C7—C2—C3—O1179.14 (17)N2—C1—C2—C70.5 (3)
C8—C9—C10—C110.2 (3)N2—C1—N1—C80.1 (2)
C8—C9—N2—C10.4 (2)N2—C1—N1—Co1175.33 (12)
C9—C8—C13—C120.1 (3)N2—C9—C10—C11177.55 (19)
C9—C8—N1—C10.2 (2)O1—C3—C4—C5179.09 (17)
C9—C8—N1—Co1174.96 (12)
Symmetry code: (i) x+1, y+1, z+2.
Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
N2—H2···S1ii0.78 (3)2.63 (3)3.3843 (17)162 (2)
O2—H2A···S1iii0.84 (3)2.42 (3)3.2498 (15)174 (2)
Symmetry codes: (ii) x+1, y+1, z+1; (iii) x1, y, z.
Bis[µ-2-(1H-1,3-benzodiazol-2-yl)phenolato]bis{[2-(1H-1,3-benzodiazol-2-yl)phenolato](thiocyanato)manganese(III)} dihydrate (Struct-2) top
Crystal data top
[Mn2(C13H9N2O)4(NCS)2]·2H2OF(000) = 2256
Mr = 1098.96Dx = 1.535 Mg m3
Monoclinic, C2/cCu Kα radiation, λ = 1.54178 Å
a = 21.8914 (6) ÅCell parameters from 8754 reflections
b = 16.3110 (4) Åθ = 3.4–74.0°
c = 13.5260 (4) ŵ = 5.69 mm1
β = 100.163 (2)°T = 100 K
V = 4754.0 (2) Å3(cut) plate, pale-brown
Z = 40.07 × 0.05 × 0.02 mm
Data collection top
Rigaku 007HF
diffractometer with HF Varimax confocal mirrors, an UG2 goniometer and HyPix Arc-100 detector
4776 independent reflections
Radiation source: Rotating anode, Rigaku 007 HF3991 reflections with I > 2σ(I)
HF Varimax focusing mirrors monochromatorRint = 0.043
Detector resolution: 10 pixels mm-1θmax = 74.5°, θmin = 3.4°
profile data from ω–scansh = 2627
Absorption correction: gaussian
(CrysAlisPro; Rigaku OD, 2023)
k = 2016
Tmin = 0.940, Tmax = 1.000l = 1616
34537 measured reflections
Refinement top
Refinement on F2Primary atom site location: dual
Least-squares matrix: fullHydrogen site location: mixed
R[F2 > 2σ(F2)] = 0.039H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.107 w = 1/[σ2(Fo2) + (0.0594P)2 + 4.7168P]
where P = (Fo2 + 2Fc2)/3
S = 1.05(Δ/σ)max = 0.001
4776 reflectionsΔρmax = 1.24 e Å3
346 parametersΔρmin = 0.48 e Å3
2 restraints
Special details top

Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.

Refinement. The N-H bond lengths (N2-H2 and N4-H4a) have been restrained, otherwise they refined to unrealistic values. A peak of residual electron density (c.a. 1.2e-) at position (0.5, 0.264, 0.5 - close to atoms S1 and O3) remains unmodelled in the final refinement. During Structure development, a low occupancy water was modelled at this site (which also necessitated some disorder of the adjacent SCN ion). This arrangement gave rise to a chemically sensible hydrogen bond network and improved the refinement statistics; however, this arrangement freely refined to <8% occupancy and it has been omitted as this was deemed too low for reasonable certainty of the modelled disorder.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/Ueq
C10.45395 (11)0.41180 (13)0.62465 (15)0.0255 (4)
C20.39349 (11)0.37490 (13)0.62530 (16)0.0262 (5)
C30.38936 (10)0.29465 (13)0.66257 (16)0.0254 (4)
C40.33086 (11)0.26158 (14)0.66495 (17)0.0289 (5)
H40.3275110.2077190.6901750.035*
C50.27751 (11)0.30661 (15)0.63085 (18)0.0340 (5)
H50.2379270.2831140.6319710.041*
C60.28171 (12)0.38602 (16)0.59500 (19)0.0361 (5)
H60.2451090.4168900.5723690.043*
C70.33893 (11)0.41961 (14)0.59247 (17)0.0318 (5)
H70.3416160.4738870.5681360.038*
C80.55415 (11)0.43002 (13)0.63085 (16)0.0269 (5)
C90.52603 (12)0.50736 (14)0.62745 (16)0.0283 (5)
C100.56009 (12)0.58000 (14)0.63208 (17)0.0335 (5)
H100.5404990.6321100.6297600.040*
C110.62322 (13)0.57260 (14)0.64016 (18)0.0363 (6)
H110.6479920.6206780.6434930.044*
C120.65211 (12)0.49509 (14)0.64362 (17)0.0330 (5)
H120.6958970.4921750.6487970.040*
C130.61812 (11)0.42302 (14)0.63965 (17)0.0298 (5)
H130.6378160.3709460.6428230.036*
C140.56524 (10)0.08065 (13)0.63916 (15)0.0231 (4)
C150.62696 (10)0.11510 (13)0.64054 (16)0.0254 (4)
C160.63244 (10)0.19544 (13)0.60372 (16)0.0266 (5)
C170.69149 (11)0.22342 (15)0.59277 (17)0.0312 (5)
H170.6958070.2764290.5657130.037*
C180.74332 (11)0.17511 (16)0.62069 (17)0.0334 (5)
H180.7829690.1953720.6134170.040*
C190.73803 (11)0.09661 (16)0.65960 (18)0.0336 (5)
H190.7739130.0637910.6798090.040*
C200.68016 (11)0.06732 (14)0.66835 (17)0.0301 (5)
H200.6763900.0136130.6937820.036*
C210.46421 (10)0.06703 (13)0.61863 (15)0.0238 (4)
C220.48984 (10)0.01194 (13)0.62563 (15)0.0247 (4)
C230.45339 (11)0.08204 (13)0.61694 (16)0.0271 (5)
H230.4712260.1353020.6224490.032*
C240.38993 (11)0.07056 (14)0.59990 (16)0.0288 (5)
H240.3634150.1170750.5938480.035*
C250.36361 (11)0.00813 (14)0.59129 (16)0.0281 (5)
H250.3197200.0136200.5793690.034*
C260.40020 (10)0.07811 (13)0.59978 (16)0.0268 (5)
H260.3823040.1313210.5930150.032*
C270.41872 (11)0.21771 (13)0.40867 (17)0.0280 (5)
Mn10.50948 (2)0.24690 (2)0.62879 (2)0.02207 (11)
N10.50728 (8)0.37102 (11)0.62871 (13)0.0253 (4)
N20.46335 (10)0.49371 (11)0.62275 (14)0.0282 (4)
H20.4364 (10)0.5316 (14)0.623 (2)0.034*
N30.51284 (8)0.12376 (10)0.62987 (12)0.0231 (4)
N40.55341 (9)0.00065 (11)0.63934 (13)0.0250 (4)
H4A0.5802 (10)0.0389 (13)0.6434 (19)0.030*
N50.44756 (10)0.23983 (11)0.48419 (15)0.0309 (4)
O10.44065 (7)0.25005 (8)0.69943 (11)0.0240 (3)
O20.58367 (8)0.24520 (8)0.57549 (12)0.0275 (3)
O30.59279 (9)0.34515 (12)0.39364 (16)0.0419 (4)
H3A0.5869 (17)0.319 (2)0.444 (3)0.063*
H3B0.5904 (16)0.310 (2)0.343 (3)0.063*
S10.37974 (3)0.18737 (4)0.30045 (5)0.03899 (17)
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
C10.0363 (12)0.0218 (10)0.0181 (10)0.0027 (9)0.0041 (8)0.0014 (8)
C20.0338 (12)0.0237 (11)0.0215 (10)0.0026 (9)0.0060 (9)0.0008 (8)
C30.0311 (11)0.0234 (10)0.0220 (10)0.0047 (9)0.0054 (8)0.0011 (8)
C40.0328 (12)0.0275 (11)0.0264 (11)0.0011 (9)0.0058 (9)0.0000 (9)
C50.0300 (12)0.0369 (13)0.0350 (13)0.0032 (10)0.0052 (10)0.0008 (10)
C60.0345 (13)0.0376 (13)0.0349 (13)0.0110 (11)0.0027 (10)0.0016 (10)
C70.0414 (13)0.0273 (11)0.0265 (11)0.0088 (10)0.0058 (10)0.0033 (9)
C80.0400 (13)0.0207 (10)0.0207 (10)0.0045 (9)0.0069 (9)0.0018 (8)
C90.0429 (13)0.0233 (11)0.0187 (10)0.0010 (10)0.0051 (9)0.0017 (8)
C100.0488 (15)0.0201 (11)0.0318 (12)0.0028 (10)0.0073 (11)0.0038 (9)
C110.0505 (15)0.0259 (11)0.0323 (12)0.0111 (11)0.0072 (11)0.0016 (10)
C120.0400 (13)0.0300 (12)0.0294 (12)0.0075 (10)0.0074 (10)0.0005 (9)
C130.0383 (13)0.0257 (11)0.0260 (11)0.0028 (10)0.0078 (9)0.0004 (9)
C140.0306 (11)0.0216 (10)0.0172 (9)0.0018 (9)0.0048 (8)0.0007 (8)
C150.0313 (11)0.0252 (10)0.0205 (10)0.0005 (9)0.0064 (8)0.0028 (8)
C160.0319 (12)0.0256 (11)0.0235 (10)0.0010 (9)0.0078 (9)0.0024 (8)
C170.0361 (13)0.0292 (11)0.0295 (12)0.0025 (10)0.0089 (10)0.0011 (9)
C180.0311 (12)0.0381 (13)0.0326 (12)0.0046 (10)0.0101 (10)0.0028 (10)
C190.0313 (12)0.0379 (13)0.0313 (12)0.0047 (10)0.0050 (9)0.0010 (10)
C200.0350 (12)0.0271 (11)0.0284 (11)0.0018 (10)0.0058 (9)0.0000 (9)
C210.0333 (12)0.0197 (10)0.0193 (10)0.0023 (9)0.0073 (8)0.0001 (8)
C220.0323 (12)0.0235 (10)0.0186 (10)0.0013 (9)0.0053 (8)0.0008 (8)
C230.0372 (12)0.0199 (10)0.0248 (11)0.0014 (9)0.0074 (9)0.0004 (8)
C240.0388 (13)0.0266 (11)0.0220 (11)0.0076 (10)0.0080 (9)0.0027 (8)
C250.0300 (12)0.0299 (11)0.0246 (11)0.0022 (9)0.0055 (9)0.0021 (9)
C260.0323 (12)0.0233 (11)0.0251 (11)0.0007 (9)0.0056 (9)0.0007 (8)
C270.0311 (12)0.0204 (10)0.0333 (13)0.0039 (9)0.0082 (10)0.0012 (9)
Mn10.02793 (19)0.01535 (18)0.02377 (19)0.00071 (13)0.00685 (14)0.00080 (12)
N10.0340 (10)0.0187 (9)0.0239 (9)0.0003 (7)0.0067 (8)0.0021 (7)
N20.0403 (11)0.0185 (9)0.0264 (9)0.0031 (8)0.0072 (8)0.0025 (7)
N30.0298 (10)0.0181 (8)0.0217 (9)0.0011 (7)0.0054 (7)0.0004 (6)
N40.0315 (10)0.0192 (9)0.0248 (9)0.0021 (7)0.0065 (8)0.0001 (7)
N50.0400 (11)0.0235 (9)0.0283 (10)0.0036 (8)0.0037 (9)0.0030 (8)
O10.0281 (8)0.0200 (7)0.0238 (8)0.0007 (6)0.0038 (6)0.0022 (5)
O20.0325 (9)0.0217 (8)0.0295 (8)0.0009 (6)0.0085 (7)0.0035 (6)
O30.0521 (11)0.0348 (10)0.0406 (11)0.0063 (8)0.0130 (9)0.0089 (8)
S10.0398 (3)0.0360 (3)0.0373 (3)0.0049 (3)0.0040 (2)0.0100 (3)
Geometric parameters (Å, º) top
C1—C21.455 (3)C16—O21.342 (3)
C1—N11.336 (3)C17—H170.9500
C1—N21.353 (3)C17—C181.378 (4)
C2—C31.411 (3)C18—H180.9500
C2—C71.403 (3)C18—C191.397 (4)
C3—C41.395 (3)C19—H190.9500
C3—O11.357 (3)C19—C201.379 (3)
C4—H40.9500C20—H200.9500
C4—C51.388 (3)C21—C221.402 (3)
C5—H50.9500C21—C261.391 (3)
C5—C61.392 (4)C21—N31.398 (3)
C6—H60.9500C22—C231.387 (3)
C6—C71.373 (4)C22—N41.383 (3)
C7—H70.9500C23—H230.9500
C8—C91.401 (3)C23—C241.380 (3)
C8—C131.389 (3)C24—H240.9500
C8—N11.403 (3)C24—C251.403 (3)
C9—C101.395 (3)C25—H250.9500
C9—N21.380 (3)C25—C261.388 (3)
C10—H100.9500C26—H260.9500
C10—C111.372 (4)C27—N51.160 (3)
C11—H110.9500C27—S11.636 (2)
C11—C121.411 (4)Mn1—N12.0251 (18)
C12—H120.9500Mn1—N32.0099 (17)
C12—C131.387 (3)Mn1—N52.177 (2)
C13—H130.9500Mn1—O1i2.3869 (16)
C14—C151.460 (3)Mn1—O11.9219 (16)
C14—N31.332 (3)Mn1—O21.8898 (17)
C14—N41.351 (3)N2—H20.854 (17)
C15—C161.415 (3)N4—H4A0.851 (17)
C15—C201.397 (3)O3—H3A0.83 (4)
C16—C171.403 (3)O3—H3B0.89 (4)
N1—C1—C2125.64 (19)C20—C19—H19120.4
N1—C1—N2111.0 (2)C15—C20—H20119.4
N2—C1—C2123.4 (2)C19—C20—C15121.2 (2)
C3—C2—C1120.1 (2)C19—C20—H20119.4
C7—C2—C1120.5 (2)C26—C21—C22120.7 (2)
C7—C2—C3119.4 (2)C26—C21—N3131.1 (2)
C4—C3—C2118.9 (2)N3—C21—C22108.22 (19)
O1—C3—C2121.8 (2)C23—C22—C21122.3 (2)
O1—C3—C4119.20 (19)N4—C22—C21105.55 (18)
C3—C4—H4119.7N4—C22—C23132.1 (2)
C5—C4—C3120.7 (2)C22—C23—H23121.7
C5—C4—H4119.7C24—C23—C22116.7 (2)
C4—C5—H5119.8C24—C23—H23121.7
C4—C5—C6120.3 (2)C23—C24—H24119.2
C6—C5—H5119.8C23—C24—C25121.6 (2)
C5—C6—H6120.1C25—C24—H24119.2
C7—C6—C5119.8 (2)C24—C25—H25119.2
C7—C6—H6120.1C26—C25—C24121.5 (2)
C2—C7—H7119.5C26—C25—H25119.2
C6—C7—C2120.9 (2)C21—C26—H26121.4
C6—C7—H7119.5C25—C26—C21117.2 (2)
C9—C8—N1107.5 (2)C25—C26—H26121.4
C13—C8—C9120.5 (2)N5—C27—S1178.3 (2)
C13—C8—N1131.9 (2)N1—Mn1—N592.38 (7)
C10—C9—C8122.3 (2)N1—Mn1—O1i89.18 (6)
N2—C9—C8106.49 (19)N3—Mn1—N1179.23 (8)
N2—C9—C10131.1 (2)N3—Mn1—N588.27 (7)
C9—C10—H10121.6N3—Mn1—O1i90.26 (6)
C11—C10—C9116.8 (2)N5—Mn1—O1i168.77 (7)
C11—C10—H10121.6O1—Mn1—N187.30 (7)
C10—C11—H11119.3O1—Mn1—N393.10 (6)
C10—C11—C12121.4 (2)O1—Mn1—N591.70 (7)
C12—C11—H11119.3O1—Mn1—O1i77.26 (7)
C11—C12—H12119.2O2—Mn1—N192.09 (7)
C13—C12—C11121.6 (2)O2—Mn1—N387.43 (7)
C13—C12—H12119.2O2—Mn1—N595.58 (8)
C8—C13—H13121.3O2—Mn1—O1172.72 (7)
C12—C13—C8117.3 (2)O2—Mn1—O1i95.48 (6)
C12—C13—H13121.3C1—N1—C8106.84 (18)
N3—C14—C15125.27 (19)C1—N1—Mn1121.21 (15)
N3—C14—N4110.85 (19)C8—N1—Mn1131.94 (15)
N4—C14—C15123.69 (19)C1—N2—C9108.16 (19)
C16—C15—C14119.19 (19)C1—N2—H2127.4 (19)
C20—C15—C14120.96 (19)C9—N2—H2124.4 (19)
C20—C15—C16119.6 (2)C14—N3—C21106.70 (17)
C17—C16—C15118.4 (2)C14—N3—Mn1123.91 (14)
O2—C16—C15123.2 (2)C21—N3—Mn1129.36 (14)
O2—C16—C17118.3 (2)C14—N4—C22108.60 (18)
C16—C17—H17119.5C14—N4—H4A126.1 (18)
C18—C17—C16120.9 (2)C22—N4—H4A125.2 (18)
C18—C17—H17119.5C27—N5—Mn1164.52 (17)
C17—C18—H18119.7C3—O1—Mn1120.15 (13)
C17—C18—C19120.6 (2)C3—O1—Mn1i125.16 (12)
C19—C18—H18119.7Mn1—O1—Mn1i102.67 (7)
C18—C19—H19120.4C16—O2—Mn1126.48 (13)
C20—C19—C18119.2 (2)H3A—O3—H3B108 (3)
C1—C2—C3—C4178.2 (2)C20—C15—C16—C172.4 (3)
C1—C2—C3—O10.7 (3)C20—C15—C16—O2180.0 (2)
C1—C2—C7—C6178.5 (2)C21—C22—C23—C240.6 (3)
C2—C1—N1—C8177.4 (2)C21—C22—N4—C140.8 (2)
C2—C1—N1—Mn13.5 (3)C22—C21—C26—C251.8 (3)
C2—C1—N2—C9177.21 (19)C22—C21—N3—C142.3 (2)
C2—C3—C4—C50.3 (3)C22—C21—N3—Mn1179.52 (14)
C2—C3—O1—Mn1i91.4 (2)C22—C23—C24—C250.3 (3)
C2—C3—O1—Mn144.6 (2)C23—C22—N4—C14177.7 (2)
C3—C2—C7—C60.8 (3)C23—C24—C25—C260.2 (3)
C3—C4—C5—C60.9 (4)C24—C25—C26—C210.9 (3)
C4—C3—O1—Mn1137.83 (17)C26—C21—C22—C231.7 (3)
C4—C3—O1—Mn1i86.2 (2)C26—C21—C22—N4177.00 (18)
C4—C5—C6—C70.7 (4)C26—C21—N3—C14175.3 (2)
C5—C6—C7—C20.2 (4)C26—C21—N3—Mn12.8 (3)
C7—C2—C3—C40.5 (3)N1—C1—C2—C320.7 (3)
C7—C2—C3—O1177.02 (19)N1—C1—C2—C7161.7 (2)
C8—C9—C10—C110.0 (3)N1—C1—N2—C91.0 (2)
C8—C9—N2—C10.8 (2)N1—C8—C9—C10177.6 (2)
C9—C8—C13—C120.7 (3)N1—C8—C9—N20.4 (2)
C9—C8—N1—C10.2 (2)N1—C8—C13—C12177.3 (2)
C9—C8—N1—Mn1178.78 (15)N1—Mn1—O2—C16138.39 (17)
C9—C10—C11—C120.0 (4)N2—C1—C2—C3157.3 (2)
C10—C9—N2—C1176.9 (2)N2—C1—C2—C720.4 (3)
C10—C11—C12—C130.4 (4)N2—C1—N1—C80.8 (2)
C11—C12—C13—C80.8 (3)N2—C1—N1—Mn1178.37 (13)
C13—C8—C9—C100.3 (3)N2—C9—C10—C11177.5 (2)
C13—C8—C9—N2177.64 (19)N3—C14—C15—C1617.8 (3)
C13—C8—N1—C1176.6 (2)N3—C14—C15—C20168.5 (2)
C13—C8—N1—Mn14.4 (4)N3—C14—N4—C222.4 (2)
C14—C15—C16—C17171.4 (2)N3—C21—C22—C23179.65 (19)
C14—C15—C16—O26.2 (3)N3—C21—C22—N40.9 (2)
C14—C15—C20—C19173.0 (2)N3—C21—C26—C25179.2 (2)
C15—C14—N3—C21172.27 (19)N3—Mn1—O2—C1641.01 (17)
C15—C14—N3—Mn16.0 (3)N4—C14—C15—C16156.8 (2)
C15—C14—N4—C22172.89 (19)N4—C14—C15—C2017.0 (3)
C15—C16—C17—C182.4 (3)N4—C14—N3—C212.9 (2)
C15—C16—O2—Mn130.7 (3)N4—C14—N3—Mn1178.83 (13)
C16—C15—C20—C190.7 (3)N4—C22—C23—C24177.7 (2)
C16—C17—C18—C190.7 (4)N5—Mn1—O2—C16129.02 (17)
C17—C16—O2—Mn1151.68 (16)O1—C3—C4—C5177.9 (2)
C17—C18—C19—C201.0 (4)O1i—Mn1—O2—C1649.01 (17)
C18—C19—C20—C151.0 (4)O2—C16—C17—C18179.8 (2)
Symmetry code: (i) x+1, y, z+3/2.
Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
N2—H2···O3ii0.85 (2)2.11 (2)2.893 (3)152 (2)
N4—H4A···S1iii0.85 (2)2.64 (2)3.4147 (19)152 (2)
O3—H3A···O20.83 (4)2.17 (4)2.987 (2)173 (3)
O3—H3B···S1iv0.89 (4)2.94 (4)3.799 (2)163 (3)
Symmetry codes: (ii) x+1, y+1, z+1; (iii) x+1, y, z+1; (iv) x+1, y, z+1/2.
 

Acknowledgements

The authors would like to thank the UKRI/EPSRC for continued support and funding for the UK National Crystallography Service (EP/W02098X/1) and, in particular, for the recent funding to establish the National Electron Diffraction Facility (EP/X014444/1).

Funding information

Funding for this research was provided by: Engineering and Physical Sciences Research Council (grant No. EP/W02098X/1).

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