research communications
Synthesis,
and Hirshfeld surface analysis of sulfamethoxazolium methylsulfate monohydrateaInstituto de Química Rosario (IQUIR, CONICET-UNR) and Facultad de Ciencias, Bioquímicas y Farmacéuticas, Universidad Nacional de Rosario. Suipacha 531, 2000 Rosario, Argentina, and bDepartamento Física de la Materia Condensada, Gerencia de Investigación y, Aplicaciones, Centro Atómico Constituyentes, Comisión Nacional de Energía, Atómica, Av. Gral. Paz 1499, B1650KNA, San Martín, Buenos Aires, Argentina
*Correspondence e-mail: kaufman@iquir-conicet.gov.ar, calvo@iquir-conicet.gov.ar
The molecular salt sulfamethoxazolium {or 4-[(5-methyl-1,2-oxazol-3-yl)sulfamoyl]anilinium methyl sulfate monohydrate}, C10H12N3O3S+·CH3O4S−·H2O, was prepared by the reaction of sulfamethoxazole and H2SO4 in methanol and crystallized from methanol–ether–water. Protonation takes place at the nitrogen atom of the primary amino group. In the crystal, N—H⋯O hydrogen bonds (water and methylsulfate anion) and intermolecular N—H⋯N interactions involving the sulfonamide and isoxazole nitrogen atoms, link the components into a tri-dimensional network, additional cohesion being provided by face-to-face π–π interactions between the phenyl rings of adjacent molecules. A Hirshfeld surface analysis was used to verify the contributions of the different intermolecular interactions, showing that the three most important contributions for the crystal packing are from H⋯O (54.1%), H⋯H (29.2%) and H⋯N (5.0%) interactions.
CCDC reference: 2385280
1. Chemical context
Sulfamethoxazole {SMX or 4-[(5-methylisoxazol-3-yl)aminosulfonyl]aniline} is a widely employed sulfa drug that is effective against Gram-negative and Gram-positive bacteria, and active against some protozoans and fungi (Manyando et al., 2013). Being structurally similar to para-aminobenzoic acid (PABA), it acts as a dihydrofolate reductase inhibitor (Cushion & Walzer, 2009); it also competitively inhibits the enzyme dihydropteroate synthase, preventing the biosynthesis of dihydropteroic acid, a precursor of folic acid that is required for bacterial growth (Khalil et al., 2003).
SMX has both low solubility and permeability; therefore, it is a Class IV drug in the Biopharmaceutical Classification System (BCS). The poor solubility of SMX has elicited continuous interest in finding alternative forms of the drug with improved pharmacological profiles. As a result, several polymorphs (Price et al., 2005), hydrates (Alsubaie et al., 2018; Takasuka & Nakai, 2001), metal complexes (Habila et al., 2021), co-crystals [including that with trimethoprim (Bettinetti & Giordano, 1988), with which it forms a useful pharmaceutical association], and salts (de Moura Oliveira et al., 2019) of SMX have been reported. In connection with our research program on the characterization of new solid phases derived from poorly soluble active pharmaceutical ingredients, herein we report on the and the supramolecular packing pattern of the acid methylsulfate monohydrate salt of SMX (SMXHMeSO4·H2O). Acid methylsulfate monohydrate salts of other active pharmaceutical ingredients have been reported (Gutiérrez et al., 2020); among them is neostigmine methylsulfate, a cholinesterase inhibitor used in the treatment of myasthenia gravis and to reverse the effects of muscle relaxants (Papich, 2021) and pralidoxime methylsulfate, a widely agent used to treat organophosphate poisoning (Thompson et al., 1987).
2. Structural commentary
The crystals of the title monohydrate salt SMXHMeSO4·H2O, (I), appear as small white rods under white light that display birefringence under polarized light (Fig. 1) and have a melting point 374.5–375.5 K. The title compound crystallizes in the triclinic P with one of each component (sulfamethoxazolium cation, methylsulfate anion, and water) in the (Fig. 2).
The sulfamethoxazolium cation, which undergoes protonation at the primary amino nitrogen, is L-shaped. The C6—C5—S8—N11 torsion angle is 96.4 (2)°, while the dihedral angle between the planes formed by the aromatic rings is 88.83 (13)° and the S8—N11—C12—N16 torsion angle is 162.5 (2)°.
The nitrogen atom of the sulfonamide has sp2 character, as a result of conjugation; the S8—N11—C12 angle is 125.09 (17)° and the N—H moiety is almost coplanar with the isoxazole ring, with the H11—N11—C12—N16 torsion angle being −17°. The cation and the anion in the are linked by the N1—H1B⋯O18 hydrogen bond (Fig. 3 and Table 1). The methyl group of the anion occupies the hydrophobic pocket formed by the aromatic rings of the cation, with H23C located 2.96 Å from the centroid of the phenyl ring and H23A 2.81 Å from the centroid of the isoxazole ring. The N1—H1C⋯O24 hydrogen bond links the water molecule to the cation. Both sulfur atoms exhibit slightly distorted tetrahedral geometries; the O9—S8—O10 and O18—S21—O20 angles have values of 119.97 (12) and 115.06 (14)°, respectively, presenting the maximum deviations from the expected ones.
3. Supramolecular features
The salt structure is consolidated by a three-dimensional network of hydrogen bonds between the anions, cations, and water molecules, as well as by π–π interactions between aromatic rings (Fig. 3, Tables 1 and 2). Among the salient features, each water molecule establishes hydrogen bonds with SMXH+ units, acting through O24 as an acceptor with H1C (protonated primary amino group, x, y, z) and through H24A as a donor with both, O10 (sulfonamide, −x + 1, −y + 1, −z + 1) and O15 (isoxazole, x − 1, y, z + 1) in a bifurcated interaction. An additional hydrogen bond relates H24B with O19 of the methylsulfate anion (−x, −y, −z + 1).
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Each methylsulfate anion establishes four interactions; two of them are hydrogen bonds O18⋯H1B (x, y, z) and O19⋯H1A (−x + 1, −y, −z + 1) with slightly different lengths (1.944 and 1.913 Å, respectively), that bridge a pair of adjacent SMX molecules through their protonated amino moieties, while the third hydrogen bond is an interaction with a water molecule (O19⋯H24B). The fourth is a C—H⋯O intermolecular interaction between H23B and O20 of a neighboring methylsulfate anion (x + 1, y, z), which results in a chain of methylsulfate anions running along the a-axis direction.
In addition, the SMXH+ units are also directly connected through pairs of N11—H11⋯N16 hydrogen bonds (−x + 1, −y + 1, −z), which involve the isoxazole nitrogen atom (N16) and the sulfonamide N—H moiety (N11—H11).
The structure also features face-to-face π–π interactions between the phenyl rings of adjacent molecules, which adopt an antiparallel arrangement, in parallel planes. In one of them (1 − x, 1 − y, 1 − z), the planes are 3.5674 (10) Å apart (Table 2), and the stacked aromatic rings are slipped by 2.535 Å. This aromatic ring displacement (slippage) is the distance between the perpendicular projection of the centroid of one ring on the other and the centroid of the latter. In addition, the mean slippage angle (sa, the angle subtended by the inter-centroid vector to the plane normal) is 35.4°, whereas the distance between centroids is 4.3764 (14) Å. Face-to-face π–π interactions are also observed between the isoxazole rings (2 − x, 1 − y, −z), which are also arranged in an antiparallel fashion. The interplanar distance is 3.5028 (10) Å while the intercentroid distance is 4.8490 (16) Å, resulting in a slippage angle of 43.7° and a slippage of 3.353 Å. Considering the geometrical requirements for interactions between aromatic rings (Hunter & Sanders, 1990), the parameters of both slipped packings correspond to attractive interactions.
The π–π interactions between aromatic rings play an important role in controlling the packing or assembly of molecules. Usually, they take the form of an offset or slipped stacking, where the rings are parallel displaced a certain distance (slippage, aromatic ring displacement). These interactions between aromatic rings of adjacent molecules seem to be one of the characteristic features of the sulfamethoxazolium derivatives, being found in several congeners of the title compound (Table 2).
The formation of antiparallel π-stacking interactions in these compounds may contribute to the cohesion of the crystal, considering that the phenyl ring has an electron-poor region at the sulfonamide side, opposite to a more electron-rich zone on the protonated amino region. In addition, the positively charged atom contributes to the attractive π–σ interaction due to the induced σ polarization.
4. Hirshfeld surface analysis
The three-dimensional Hirshfeld surface (McKinnon et al., 2007) with a dnorm (normalized contact distance) plot (Fig. 4) and two-dimensional fingerprint plots (Spackman & McKinnon, 2002) were generated with Crystal Explorer 17.5 (Spackman et al., 2021). This analysis was carried out to verify the presence of intermolecular interactions and hydrogen bonds in the and assess the contributions from the different intermolecular interactions in the title compound.
The Hirshfeld surface was plotted over the range −0.6318 (red) to +1.4441 (blue) a.u. The red spots on the top left of the surface indicate the sites of the N11—H11⋯N16 interactions (−x + 1, −y + 1, −z) between the sulfonamide N—H moiety and the nitrogen atom of the isoxazole, while at the top right, the place of the O⋯H interaction between the sulfonamide and the isoxazole with water can be observed.
A C4—H4⋯O24 (x, y, z) interaction site with water is also visible on top. In addition, the sites of interaction of H2O with oxygen atoms of the neighbouring methylsulfate anion O24—H24B⋯O19 (−x, −y, −z + 1) are shown on the top right and the same interaction can be observed at the bottom right. The 2D fingerprint plots (Fig. 5) revealed that the greatest contributions to the total intermolecular interactions (Fig. 5A) are from H⋯O/O⋯H contacts (54.1%), which appear in the middle of the scattered points of the 2D fingerprint plot, along with two symmetrical broad wings (Fig. 5B), followed by H⋯H contacts observed in the middle of the scattered points in the plot (29.2%, Fig. 5C), and H⋯N/N⋯H contacts (5.0%, Fig. 5D), which result from the interactions between the sulfonamide N—H moiety and the nitrogen atom of the isoxazole to form a dimer, and are present as sharp symmetrical spikes at diagonal axes.
The proportions of these contributions are the expected ones due to the significant hydrogen content, which is present in the three components of the salt, and the fact that many of them are attached to heteroatoms. These interactions suggest that hydrogen bonding plays a major role in the crystal packing. The contributions to the Hirshfeld surface from other interatomic interactions include H⋯C/C⋯H, which are displayed as bump symmetrical spikes at diagonal axes (5.0%, Fig. 5E), C⋯O/O⋯C (2.6%) and C⋯N/N⋯C contacts (1.0%, Fig. 5F). In comparison, N⋯O/O⋯N (1.1%), C⋯S/S⋯C (0.1%), and H⋯S/S⋯H (0.1%) contacts represent additional, minor participations.
5. Database survey
A simple search in the Cambridge Structural Database (CSD, accessed via WebCSD on September 19, 2024; Groom et al., 2016) with the keyword ‘sulfamethoxazole’ gave 73 hits, of which only six involved the sulfamethoxazolium ion, and included the following salts: chloride (SIMJEE, Subashini et al., 2007), bromide (GAGLAS, de Moura Oliveira et al., 2019), nitrate (GOGLEW, de Moura Oliveira et al., 2019), pentaiodide monohydrate (CIDDAY, de Moura Oliveira et al., 2019), 3,5-dinitrosalicylate (TUJPEV, Malathy et al., 2015), and the metallic complex catena-[bis(sulfamethoxazolium)(μ2-chloridotrichloridocadmium(II) monohydrate] (RISZAV, Subashini et al., 2008). A more in-depth search of the database, using the keyword ‘sulfamethoxazolium’ uncovered the metallic complex trichloro-{4-[(5-methyl-1,2-oxazol-3-yl)sulfamoyl]anilinium}zinc (AWARIC, Habila et al., 2021) as the seventh member of this family of compounds.
In all cases, the structure of the protonated form of SMX is L-shaped, displaying dihedral angles between the mean planes of the phenyl ring and the isoxazole unit of 58° (SIMJEE), 75° (GAGLAS), 87° (GOGLEW), 87° (CIDDAY), 82° (TUJPEV), 88.3° (RISZAV) and 89.2° (AWARIC). The simple halide salts (chloride and bromide) displayed the smallest values for the dihedral angle between the planes containing the isoxazole and anilinium rings. The S8—N11—C12—N16 torsion angles of the compounds presented the following values: −57.2 (4)° (SIMJEE), −25.3 (4)° (GAGLAS), −26.38 (1)° (CIDDAY), −152.4 (4)/151.5 (4)° (GOGLEW), −164.3 (2)° (AWARIC), 164.49 (14)° (TUJPEV) and 158.6 (3)° (RISZAV). Accordingly, salts in this series could be grouped in two sets; on one side the halides, with a small torsion angle, measuring less than 60°, and the remaining compounds including SMXHMeSO4·H2O on the other, with large torsions, where the angles are above 150°. This suggests that the isoxazole ring in these compounds adopts two main orientations.
6. Synthesis and crystallization
A sample of sulfamethoxazole (250 mg, 0.99 mmol) was dissolved in methanol (25 mL) at room temperature and treated with a methanolic solution of H2SO4 (0.507 M, 1.95 mL, 0.99 mmol). After stirring for 30 min, the solution was allowed to concentrate to 12 mL (3 days) at room temperature, when Et2O (54 mL) containing water (0.1%, 0.054 mL, 3 mmol) was added. The system was left to stand at room temperature and crystals (15 mg) were collected after 6 d.
7. Refinement
Table 3 summarizes crystal data, data collection, and structure details. The H atoms were positioned geometrically and refined using a riding model: O—H = 0.82 Å, N—H = 0.86–0.89 Å, and C—H = 0.93–0.96 Å with Uiso(H) = 1.5Ueq(C,O,N) for methyl and ammonium H atoms and 1.2Ueq(C,N) for aromatic and other H atoms. Water H atoms were found in difference-Fourier maps and refined independently.
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Supporting information
CCDC reference: 2385280
https://doi.org/10.1107/S2056989024009204/ex2088sup1.cif
contains datablock I. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S2056989024009204/ex2088Isup2.hkl
Supporting information file. DOI: https://doi.org/10.1107/S2056989024009204/ex2088Isup3.cml
C10H12N3O3S+·CH3O4S−·H2O | Z = 2 |
Mr = 383.39 | F(000) = 400 |
Triclinic, P1 | Dx = 1.556 Mg m−3 |
a = 5.8838 (8) Å | Mo Kα radiation, λ = 0.71073 Å |
b = 11.6532 (15) Å | Cell parameters from 1942 reflections |
c = 12.3276 (16) Å | θ = 2.3–26.2° |
α = 84.722 (6)° | µ = 0.37 mm−1 |
β = 78.442 (5)° | T = 298 K |
γ = 81.940 (5)° | Needle, colourless |
V = 818.14 (19) Å3 | 1.00 × 0.35 × 0.12 mm |
Bruker D8 Quest ECO diffractometer | 2716 reflections with I > 2σ(I) |
Radiation source: Sealed tube | Rint = 0.047 |
ω scan | θmax = 26.4°, θmin = 3.4° |
Absorption correction: multi-scan (SADABS; Krause et al., 2015) | h = −7→7 |
Tmin = 0.854, Tmax = 0.956 | k = −14→14 |
18938 measured reflections | l = −15→15 |
3318 independent reflections |
Refinement on F2 | 0 restraints |
Least-squares matrix: full | Hydrogen site location: mixed |
R[F2 > 2σ(F2)] = 0.043 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.100 | w = 1/[σ2(Fo2) + (0.0142P)2 + 1.0486P] where P = (Fo2 + 2Fc2)/3 |
S = 1.06 | (Δ/σ)max < 0.001 |
3318 reflections | Δρmax = 0.33 e Å−3 |
226 parameters | Δρmin = −0.32 e Å−3 |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
x | y | z | Uiso*/Ueq | ||
C3 | 0.3075 (4) | 0.3673 (2) | 0.4655 (2) | 0.0359 (5) | |
H3 | 0.152494 | 0.384591 | 0.500421 | 0.043* | |
C4 | 0.4132 (4) | 0.4451 (2) | 0.3856 (2) | 0.0375 (5) | |
H4 | 0.330192 | 0.515477 | 0.366393 | 0.045* | |
C6 | 0.7715 (4) | 0.3127 (2) | 0.3633 (2) | 0.0368 (5) | |
H6 | 0.926915 | 0.295236 | 0.329032 | 0.044* | |
C7 | 0.6653 (4) | 0.2354 (2) | 0.4430 (2) | 0.0367 (5) | |
H7 | 0.748077 | 0.165273 | 0.462965 | 0.044* | |
C13 | 0.9869 (5) | 0.3140 (2) | 0.0578 (2) | 0.0475 (6) | |
H13 | 1.096502 | 0.312564 | 0.102944 | 0.057* | |
N1 | 0.3214 (3) | 0.18050 (16) | 0.57383 (16) | 0.0334 (4) | |
H1A | 0.418354 | 0.149870 | 0.618726 | 0.050* | |
H1B | 0.284132 | 0.124328 | 0.538887 | 0.050* | |
H1C | 0.192294 | 0.216536 | 0.613491 | 0.050* | |
C2 | 0.4356 (4) | 0.26394 (19) | 0.49225 (18) | 0.0293 (5) | |
C5 | 0.6438 (4) | 0.41640 (19) | 0.33507 (18) | 0.0301 (5) | |
S8 | 0.77327 (11) | 0.51495 (5) | 0.23174 (5) | 0.03585 (16) | |
O9 | 0.6651 (4) | 0.63011 (15) | 0.25416 (15) | 0.0480 (5) | |
O10 | 1.0205 (3) | 0.48770 (17) | 0.21978 (15) | 0.0489 (5) | |
N11 | 0.6972 (4) | 0.48975 (18) | 0.11723 (16) | 0.0389 (5) | |
H11 | 0.595794 | 0.540280 | 0.092239 | 0.047* | |
C12 | 0.7835 (4) | 0.3928 (2) | 0.05656 (18) | 0.0357 (5) | |
C14 | 0.9881 (5) | 0.2412 (2) | −0.0204 (2) | 0.0488 (7) | |
O15 | 0.7978 (4) | 0.27161 (17) | −0.06734 (15) | 0.0530 (5) | |
N16 | 0.6641 (4) | 0.36926 (19) | −0.01609 (18) | 0.0452 (5) | |
C17 | 1.1508 (7) | 0.1406 (3) | −0.0656 (3) | 0.0721 (10) | |
H17A | 1.196861 | 0.090255 | −0.005591 | 0.108* | |
H17B | 1.286665 | 0.167607 | −0.112248 | 0.108* | |
H17C | 1.074268 | 0.098765 | −0.108343 | 0.108* | |
O18 | 0.2313 (5) | 0.0622 (2) | 0.40614 (18) | 0.0788 (8) | |
O19 | 0.3568 (3) | −0.09508 (15) | 0.28979 (18) | 0.0516 (5) | |
O20 | −0.0403 (3) | −0.00330 (17) | 0.30985 (18) | 0.0548 (5) | |
S21 | 0.19689 (10) | 0.01013 (5) | 0.31111 (5) | 0.03422 (16) | |
O22 | 0.2620 (4) | 0.09783 (18) | 0.20879 (18) | 0.0594 (6) | |
C23 | 0.4913 (6) | 0.1348 (3) | 0.1905 (3) | 0.0656 (9) | |
H23A | 0.538503 | 0.158159 | 0.113494 | 0.098* | |
H23B | 0.600925 | 0.071669 | 0.211404 | 0.098* | |
H23C | 0.487101 | 0.199088 | 0.234604 | 0.098* | |
O24 | −0.1063 (3) | 0.28881 (17) | 0.67780 (16) | 0.0431 (4) | |
H24A | −0.102 (5) | 0.317 (3) | 0.730 (3) | 0.052* | |
H24B | −0.199 (5) | 0.242 (3) | 0.696 (2) | 0.052* |
U11 | U22 | U33 | U12 | U13 | U23 | |
C3 | 0.0297 (11) | 0.0353 (12) | 0.0408 (13) | −0.0011 (9) | −0.0058 (10) | 0.0009 (10) |
C4 | 0.0379 (13) | 0.0318 (12) | 0.0416 (13) | −0.0005 (10) | −0.0101 (11) | 0.0037 (10) |
C6 | 0.0303 (12) | 0.0414 (13) | 0.0354 (12) | −0.0026 (10) | −0.0007 (10) | 0.0000 (10) |
C7 | 0.0348 (12) | 0.0320 (12) | 0.0390 (13) | 0.0026 (10) | −0.0031 (10) | 0.0021 (10) |
C13 | 0.0503 (16) | 0.0525 (16) | 0.0381 (14) | 0.0032 (13) | −0.0121 (12) | −0.0013 (12) |
N1 | 0.0324 (10) | 0.0298 (10) | 0.0361 (10) | −0.0043 (8) | −0.0029 (8) | 0.0005 (8) |
C2 | 0.0331 (11) | 0.0284 (11) | 0.0277 (11) | −0.0075 (9) | −0.0062 (9) | −0.0021 (8) |
C5 | 0.0359 (12) | 0.0309 (11) | 0.0262 (11) | −0.0089 (9) | −0.0101 (9) | −0.0003 (9) |
S8 | 0.0424 (3) | 0.0375 (3) | 0.0309 (3) | −0.0151 (3) | −0.0095 (2) | 0.0020 (2) |
O9 | 0.0693 (13) | 0.0306 (9) | 0.0461 (10) | −0.0144 (8) | −0.0106 (9) | −0.0014 (8) |
O10 | 0.0410 (10) | 0.0654 (12) | 0.0441 (10) | −0.0233 (9) | −0.0105 (8) | 0.0070 (9) |
N11 | 0.0472 (12) | 0.0394 (11) | 0.0315 (10) | −0.0008 (9) | −0.0142 (9) | −0.0012 (8) |
C12 | 0.0431 (13) | 0.0385 (13) | 0.0244 (11) | −0.0097 (10) | −0.0045 (10) | 0.0059 (9) |
C14 | 0.0604 (17) | 0.0471 (15) | 0.0342 (13) | −0.0007 (13) | −0.0039 (12) | 0.0015 (11) |
O15 | 0.0699 (13) | 0.0505 (11) | 0.0399 (10) | −0.0009 (10) | −0.0138 (9) | −0.0115 (9) |
N16 | 0.0529 (13) | 0.0470 (13) | 0.0366 (11) | −0.0016 (10) | −0.0116 (10) | −0.0070 (10) |
C17 | 0.087 (3) | 0.063 (2) | 0.0548 (19) | 0.0158 (18) | −0.0010 (17) | −0.0110 (16) |
O18 | 0.0975 (18) | 0.1011 (19) | 0.0486 (12) | −0.0523 (15) | −0.0010 (12) | −0.0284 (12) |
O19 | 0.0400 (10) | 0.0333 (9) | 0.0801 (14) | 0.0002 (8) | −0.0135 (10) | 0.0011 (9) |
O20 | 0.0323 (10) | 0.0514 (11) | 0.0801 (15) | −0.0074 (8) | −0.0105 (9) | 0.0018 (10) |
S21 | 0.0355 (3) | 0.0317 (3) | 0.0360 (3) | −0.0073 (2) | −0.0072 (2) | 0.0005 (2) |
O22 | 0.0530 (12) | 0.0613 (13) | 0.0628 (13) | −0.0149 (10) | −0.0189 (10) | 0.0302 (10) |
C23 | 0.0603 (19) | 0.066 (2) | 0.069 (2) | −0.0264 (16) | −0.0070 (16) | 0.0193 (16) |
O24 | 0.0424 (10) | 0.0425 (11) | 0.0451 (11) | −0.0108 (8) | −0.0041 (9) | −0.0080 (8) |
C3—C2 | 1.378 (3) | S8—N11 | 1.626 (2) |
C3—C4 | 1.388 (3) | N11—C12 | 1.391 (3) |
C3—H3 | 0.9300 | N11—H11 | 0.8600 |
C4—C5 | 1.384 (3) | C12—N16 | 1.312 (3) |
C4—H4 | 0.9300 | C14—O15 | 1.351 (3) |
C6—C5 | 1.385 (3) | C14—C17 | 1.481 (4) |
C6—C7 | 1.385 (3) | O15—N16 | 1.412 (3) |
C6—H6 | 0.9300 | C17—H17A | 0.9600 |
C7—C2 | 1.374 (3) | C17—H17B | 0.9600 |
C7—H7 | 0.9300 | C17—H17C | 0.9600 |
C13—C14 | 1.340 (4) | O18—S21 | 1.429 (2) |
C13—C12 | 1.405 (4) | O19—S21 | 1.4472 (18) |
C13—H13 | 0.9300 | O20—S21 | 1.4291 (18) |
N1—C2 | 1.463 (3) | S21—O22 | 1.5689 (19) |
N1—H1A | 0.8900 | O22—C23 | 1.442 (3) |
N1—H1B | 0.8900 | C23—H23A | 0.9600 |
N1—H1C | 0.8900 | C23—H23B | 0.9600 |
C5—S8 | 1.763 (2) | C23—H23C | 0.9600 |
S8—O10 | 1.4253 (19) | O24—H24A | 0.76 (3) |
S8—O9 | 1.4285 (19) | O24—H24B | 0.81 (3) |
C2—C3—C4 | 119.0 (2) | N11—S8—C5 | 106.22 (10) |
C2—C3—H3 | 120.5 | C12—N11—S8 | 125.09 (17) |
C4—C3—H3 | 120.5 | C12—N11—H11 | 117.5 |
C5—C4—C3 | 119.0 (2) | S8—N11—H11 | 117.5 |
C5—C4—H4 | 120.5 | N16—C12—N11 | 117.4 (2) |
C3—C4—H4 | 120.5 | N16—C12—C13 | 112.3 (2) |
C5—C6—C7 | 119.3 (2) | N11—C12—C13 | 130.3 (2) |
C5—C6—H6 | 120.4 | C13—C14—O15 | 109.8 (2) |
C7—C6—H6 | 120.4 | C13—C14—C17 | 134.3 (3) |
C2—C7—C6 | 118.9 (2) | O15—C14—C17 | 115.9 (3) |
C2—C7—H7 | 120.5 | C14—O15—N16 | 108.66 (19) |
C6—C7—H7 | 120.5 | C12—N16—O15 | 104.5 (2) |
C14—C13—C12 | 104.7 (2) | C14—C17—H17A | 109.5 |
C14—C13—H13 | 127.6 | C14—C17—H17B | 109.5 |
C12—C13—H13 | 127.6 | H17A—C17—H17B | 109.5 |
C2—N1—H1A | 109.5 | C14—C17—H17C | 109.5 |
C2—N1—H1B | 109.5 | H17A—C17—H17C | 109.5 |
H1A—N1—H1B | 109.5 | H17B—C17—H17C | 109.5 |
C2—N1—H1C | 109.5 | O18—S21—O20 | 115.06 (14) |
H1A—N1—H1C | 109.5 | O18—S21—O19 | 111.33 (15) |
H1B—N1—H1C | 109.5 | O20—S21—O19 | 113.41 (11) |
C7—C2—C3 | 122.3 (2) | O18—S21—O22 | 106.60 (14) |
C7—C2—N1 | 118.9 (2) | O20—S21—O22 | 103.29 (12) |
C3—C2—N1 | 118.9 (2) | O19—S21—O22 | 106.17 (12) |
C4—C5—C6 | 121.5 (2) | C23—O22—S21 | 117.03 (18) |
C4—C5—S8 | 118.33 (17) | O22—C23—H23A | 109.5 |
C6—C5—S8 | 120.15 (18) | O22—C23—H23B | 109.5 |
O10—S8—O9 | 119.97 (12) | H23A—C23—H23B | 109.5 |
O10—S8—N11 | 108.68 (11) | O22—C23—H23C | 109.5 |
O9—S8—N11 | 104.56 (11) | H23A—C23—H23C | 109.5 |
O10—S8—C5 | 107.58 (11) | H23B—C23—H23C | 109.5 |
O9—S8—C5 | 109.04 (11) | H24A—O24—H24B | 106 (3) |
C2—C3—C4—C5 | 0.2 (4) | O9—S8—N11—C12 | 172.3 (2) |
C5—C6—C7—C2 | −0.1 (4) | C5—S8—N11—C12 | −72.5 (2) |
C6—C7—C2—C3 | −0.4 (4) | S8—N11—C12—N16 | 162.55 (18) |
C6—C7—C2—N1 | 178.0 (2) | S8—N11—C12—C13 | −19.1 (4) |
C4—C3—C2—C7 | 0.4 (4) | C14—C13—C12—N16 | 1.1 (3) |
C4—C3—C2—N1 | −178.0 (2) | C14—C13—C12—N11 | −177.3 (2) |
C3—C4—C5—C6 | −0.7 (4) | C12—C13—C14—O15 | −0.4 (3) |
C3—C4—C5—S8 | 178.67 (18) | C12—C13—C14—C17 | 178.0 (3) |
C7—C6—C5—C4 | 0.7 (4) | C13—C14—O15—N16 | −0.4 (3) |
C7—C6—C5—S8 | −178.69 (18) | C17—C14—O15—N16 | −179.2 (2) |
C4—C5—S8—O10 | 160.72 (18) | N11—C12—N16—O15 | 177.28 (19) |
C6—C5—S8—O10 | −19.9 (2) | C13—C12—N16—O15 | −1.4 (3) |
C4—C5—S8—O9 | 29.1 (2) | C14—O15—N16—C12 | 1.1 (3) |
C6—C5—S8—O9 | −151.45 (19) | O18—S21—O22—C23 | 55.1 (3) |
C4—C5—S8—N11 | −83.0 (2) | O20—S21—O22—C23 | 176.7 (2) |
C6—C5—S8—N11 | 96.4 (2) | O19—S21—O22—C23 | −63.7 (3) |
O10—S8—N11—C12 | 43.0 (2) |
D—H···A | D—H | H···A | D···A | D—H···A |
C3—H3···O24 | 0.93 | 2.65 | 3.353 (3) | 133 |
C4—H4···O24i | 0.93 | 2.54 | 3.469 (3) | 177 |
C13—H13···O10 | 0.93 | 2.54 | 3.023 (3) | 113 |
N1—H1A···O19ii | 0.89 | 1.91 | 2.800 (3) | 175 |
N1—H1A···S21ii | 0.89 | 2.94 | 3.774 (2) | 156 |
N1—H1B···O18 | 0.89 | 1.95 | 2.761 (3) | 152 |
N1—H1C···O24 | 0.89 | 1.89 | 2.772 (3) | 170 |
N11—H11···N16iii | 0.86 | 2.07 | 2.912 (3) | 167 |
C23—H23B···O20iv | 0.96 | 2.65 | 3.506 (4) | 149 |
O24—H24A···O10v | 0.76 (3) | 2.54 (3) | 3.140 (3) | 137 (3) |
O24—H24A···O15vi | 0.76 (3) | 2.47 (3) | 3.072 (3) | 137 (3) |
O24—H24B···O19vii | 0.81 (3) | 2.03 (3) | 2.821 (3) | 163 (3) |
Symmetry codes: (i) −x, −y+1, −z+1; (ii) −x+1, −y, −z+1; (iii) −x+1, −y+1, −z; (iv) x+1, y, z; (v) −x+1, −y+1, −z+1; (vi) x−1, y, z+1; (vii) −x, −y, −z+1. |
Structures with centroid–centroid separations < 6.0 Å and α < 20.00° according to PLATON (Spek, 2020). Cg1, Cg2, Cg3 and Cg4 are the centroids of the O15/N16/C12–C14, C2–C7, O15'/N16'/C12'–C14' and C2'–C7' rings, respectively. α is the dihedral angle between planes I and J; ccd is the distance between ring centroids, ipd is the mean interplanar distance (distance from one plane to the neighboring centroid), slippage is distance between Cg(I) and the perpendicular projection of Cg(J) on ring I and sa is the mean slippage angle (angle subtended by the inter-centroid vector to the plane normal). For additional details, see Janiak (2000). |
Refcode | Cg(I)···Cg(J) | α | ccd | ipd | slippage | sa |
(I) | Cg1···Cg1i | 0.02 (14) | 4.8490 (16) | 3.5028 (10) | 3.353 | 43.7 |
Cg2···Cg2ii | 0.03 (11) | 5.8838 (16) | 3.0064 (10) | 5.058 | 59.3 | |
Cg2···Cg2iii | 0.03 (11) | 4.3764 (14) | 3.5674 (10) | 2.535 | 35.4 | |
CIDDAY | Cg2···Cg2iv | 0 | 3.8532 | 3.5757 | 1.436 | 21.9 |
TUJPEV | Cg2···Cg2v | 0 | 5.9284 | 3.3032 | 4.923 | 56.1 |
GAGLAS | Cg1···Cg1vi | 17 | 5.4016 | 3.4095 | 4.190 | 50.9 |
Cg1···Cg2vii | 0 | 4.2924 | 3.8496 | 1.899 | 26.3 | |
RISZAV | Cg1···Cg1viii | 17 | 4.7430 | 3.8184 | 2.813 | 36.4 |
Cg1···Cg1ix | 17 | 4.7430 | 2.9750 | 3.694 | 51.2 | |
Cg1···Cg1x | 0 | 4.4550 | 3.2790 | 3.016 | 42.6 | |
Cg2···Cg2xi | 0 | 5.5620 | 3.0159 | 4.673 | 57.2 | |
GOGLEW | Cg1/Cg3xii | 0 | 3.8495 | 3.3844 | 1.834 | 28.5 |
Cg1···Cg3xiii | 0 | 3.9641 | 3.2582 | 2.258 | 34.7 | |
Cg2···Cg2iii | 0 | 5.3927 | 3.0874 | 4.421 | 55.1 | |
Cg4···Cg4xiv | 0 | 5.3927 | 3.0831 | 4.424 | 55.1 | |
AWARIC | Cg1···Cg1xv | 0 | 4.3792 | 4.1868 | 1.283 | 17.0 |
Cg2···Cg2xvi | 0 | 4.1198 | 3.4480 | 2.255 | 33.2 |
Symmetry codes: (i) 2 - x, 1 - y, -z; (ii) -1 + x, y, z; (iii) 1 - x, 1 - y, 1 - z; (iv) 1 - x, 2 - y, 1 - z; (v) 1 - x, 2 - y, 1 - z; (vi) 1 - x, y, 1/2 - z; (vii) 1 - x, -y, -z; (viii) 1/2 - x, -y, -1/2 + z; (ix) 1/2 - x, -y, 1/2 + z; (x) 1 - x, -y, 2 - z; (xi) x, y, -1 + z; (xii) 1 - x, 1/2 + y, 1 - z; (xiii) 1 - x, 1/2 + y, 2 - z; (xiv) 1 - x, y, z; (xv) 2 - x, -y, -z; (xvi) 1 - x, -y, -1 - z. |
Acknowledgements
Author contributions: Conceptualization, X-ray analysis and writing (manuscript editing and review), DRV, DFL, NLC, TSK, and ABM; synthesis, ABM, and TB; funding acquisition and supervision, NLC and TSK.
Funding information
Funding for this research was provided by: Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET) (grant No. PIP 2021-0765 to Teodoro S. Kaufman); Agencia Nacional de Promoción Científica y Tecnológica (ANPCyT) (grant No. PICT 2022-03-0139 to Natalia L. Calvo).
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