research communications
Structure of 2,3,5-triphenyltetrazol-3-ium chloride hemipentahydrate
aDepartment of Environmental Toxicology, Southern University and A&M College, Baton Rouge, LA 70813, USA, and bDepartment of Chemistry, Louisiana State University, Baton Rouge, LA 70803, USA
*Correspondence e-mail: rao_uppu@subr.edu
The title hydrated molecular salt, C19H15N4+·Cl−·2.5H2O, has two triphenyltetrazolium cations, two chloride anions and five water molecules in the The cations differ in the conformations of the phenyl rings with respect to the heterocyclic core, most notably for the C-bonded phenyl ring, for which the N—C—C—C torsion angles differ by 36.4 (3)°. This is likely a result of one cation accepting an O—H⋯N hydrogen bond from a water molecule [O⋯N = 3.1605 (15) Å], while the other cation accepts no hydrogen bonds. In the extended structure, the water molecules are involved in centrosymmetric (H2O)2Cl2 rings as well as (H2O)4 chains. An unusual O—H⋯π interaction and weak C—H⋯O and C—H⋯Cl hydrogen bonds are also observed.
CCDC reference: 2314756
1. Chemical context
2,3,5-Triphenyltetrazolium chloride, commonly known as tetrazolium red or TTC, is a versatile redox indicator extensively used in biochemical experiments, especially for evaluating cellular viability (Rich et al., 2001) and seed quality control in various crops (França-Neto & Krzyzanowski, 2019). Beyond these applications, TTC demonstrates inducible antagonistic activity in the Bacillales effective against a host of microbes including R. solanacearum, E. coli, and Staphylococcus sp (Sierra-Zapata et al., 2020). Furthermore, the utility of TTC extends to infarct (localized dead tissue) measurement of the brain and heart in experimental animal studies (Sanchez-Bezanilla et al., 2021), validation of automated colony counting systems (Frost et al., 2016), and studying heat tolerance in cotton (Jaconis et al., 2021), as well as assessing fine-root vitality in coniferous forest stands (Clemensson-Lindell, 1994). Despite its widespread use, the crystallographic aspects of TTC have been relatively unexplored, and we now describe the of the title hydrated molecular salt, C19H15N4+ Cl−·2.5H2O (I),
This is important, because the nuances in the conformations of the pendant tetrazolium rings may influence the transport mechanisms of TTC across biological membranes and its reduction by mitochondrial NADH: ubiquinone oxidoreductase (Complex 1) or other cellular sites (Ling et al., 1957; Rich et al., 2001). Exploring these structural intricacies is expected to deepen our comprehension of the various applications of TTC, ranging from assessing cell viability to seed testing, measuring infarcts, and exploring its antimicrobial quorum-sensing properties.
2. Structural commentary
The is shown in Fig. 1. The central N—N distance in the heterocycle is 1.3341 (14) Å in the N1 molecule and 1.3324 (14) Å in the N5 molecule, while the other heterocyclic N—N distances are in the range 1.3066 (15) to 1.3137 (15) Å. The heterocyclic C—N distances are in the range 1.3442 (16) to 1.3500 (16) Å over the two cations. The two independent tetrazolium cations differ somewhat in their phenyl group conformations, one having N—N—C—C torsion angles about the N—C(phenyl) bond of 48.25 (18)° for N3—N2—C8—C13 and 50.30 (18)° for N2—N3—C14—C15 and the other having corresponding torsion angles of 57.24 (17)° for N7—N6—C27—C28 and 61.37 (17)° for N6—N7—C33—C34. The C-bound phenyl group also differs in conformation, having an N1—C1—C2—C3 torsion angle of 12.26 (19)° in one cation and N5—C20—C21—C22 = −24.14 (19)° in the other. These conformational differences are apparent in the overlay plot, Fig. 2 (Macrae et al., 2020). They may result from the fact that the N1 cation accepts a hydrogen bond from a water molecule with an O⋯N distance of 3.1605 (15) Å (Table 1), while the other does not.
of (I)3. Supramolecular features
The hydrogen bonding is illustrated in Fig. 3 and the unit-cell packing is shown in Fig. 4. As mentioned in the Structural commentary, one of the two independent cations accepts no hydrogen bonds, while the other accepts an O—H⋯N hydrogen bond from a water molecule. The remaining water molecules and chloride ions form arrays with chains propagating in the [011] direction, consisting of four hydrogen-bonded water molecules, linked by two independent centrosymmetric (H2O)2Cl2 rings having graph-set notation (Etter et al., 1990) R42(8). The O4⋯Cl1 distances in one ring are 3.1687 (14) and 3.12008 (14) Å and the O2⋯Cl2 distances in the other ring are 3.1302 (12) and 3.1740 (12) Å. The O⋯O distances in the four-water molecule chain are in the range 2.7503 (17) to 3.0040 (17) Å. The water molecule (O1) that donates a hydrogen bond to a tetrazolium N atom also donates one to an (H2O)2Cl2 ring, with an O1⋯Cl2 distance of 3.1483 (12) Å. Atom O5 forms an unusual O—H⋯π bond to the C21–C26 benzene ring and various weak C—H⋯O and C—H⋯Cl hydrogen bonds are also observed (Table 1). The O—H⋯π contact (Allen et al., 1996; Di Mino et al., 2023) involves the only water hydrogen atom (H10W) that does not donate a conventional hydrogen bond. The H⋯Cg distance is 2.76 (2) Å, the O⋯Cg distance is 3.4646 (14) Å, and the angle about H is 140.8 (18)°.
4. Database survey
We deposited the structure of (I) to the Cambridge Structural Database (CSD, version 5.45, Update 1, March 2024, Groom et al., 2016) recently as refcode ROJSUI (Chikkula et al., 2023). A search of the CSD for other salts of the same cation revealed that the structures of 2,3,5-triphenyltetrazolium chloride as the acetonitrile solvate (LAWXUD), ethanol solvate (LAWYEO) and monohydrate (LAWYAK) have been reported by Golovanov et al. (2005). In addition, the bromide salt ethanol solvate (LEGNUI; Fun et al., 2012a) and iodide salt (QECKEQ; Fun et al., 2012b) have been described. These structures have a wide range of N—N—C—C torsion angle magnitudes to the N-bound phenyl groups (41.3–86.5°), but a much smaller range of N—C—C—C torsion angle magnitudes to the C-bound phenyl group (2.2–12.6°).
5. Synthesis and crystallization
TTC was obtained from Sigma-Aldrich (CAS 298-96-4; purity >98% by HPLC) and was used without purification. Single crystals were prepared by slow cooling of a nearly Ω cm−1).
of TTC in boiling distilled water (resistance: 18.2 M6. Refinement
Crystal data, data collection and structure . All H atoms were located in difference maps, and those on C were treated as riding in geometrically idealized positions having C—H = 0.95 Å and Uiso(H) = 1.2Ueq of the parent C atom. Coordinates of water H atoms were refined with all O—H distances restrained to be approximately equal. Their Uiso values were set to 1.5Ueq times their attached O atom.
details are summarized in Table 2
|
Supporting information
CCDC reference: 2314756
https://doi.org/10.1107/S205698902400940X/hb8107sup1.cif
contains datablocks I, global. DOI:Supporting information file. DOI: https://doi.org/10.1107/S205698902400940X/hb8107Isup3.cml
Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S205698902400940X/hb8107Isup3.hkl
Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S205698902400940X/hb8107Isup3.hkl
C19H15N4+·Cl−·2.5H2O | Z = 4 |
Mr = 379.84 | F(000) = 796 |
Triclinic, P1 | Dx = 1.332 Mg m−3 |
a = 9.5599 (4) Å | Ag Kα radiation, λ = 0.56086 Å |
b = 11.8056 (5) Å | Cell parameters from 9994 reflections |
c = 17.5322 (7) Å | θ = 2.6–26.3° |
α = 94.808 (2)° | µ = 0.12 mm−1 |
β = 104.562 (2)° | T = 100 K |
γ = 95.408 (2)° | Fragment, colourless |
V = 1894.70 (14) Å3 | 0.32 × 0.28 × 0.25 mm |
Bruker D8 Venture DUO with Photon III C14 diffractometer | 13259 reflections with I > 2σ(I) |
Radiation source: IµS 3.0 microfocus | Rint = 0.084 |
φ and ω scans | θmax = 26.4°, θmin = 2.1° |
Absorption correction: multi-scan (SADABS; Krause et al., 2015) | h = −15→15 |
Tmin = 0.944, Tmax = 0.970 | k = −18→18 |
125520 measured reflections | l = −27→27 |
15816 independent reflections |
Refinement on F2 | Primary atom site location: dual |
Least-squares matrix: full | Hydrogen site location: mixed |
R[F2 > 2σ(F2)] = 0.063 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.141 | w = 1/[σ2(Fo2) + (0.0502P)2 + 1.073P] where P = (Fo2 + 2Fc2)/3 |
S = 1.16 | (Δ/σ)max = 0.001 |
15816 reflections | Δρmax = 0.63 e Å−3 |
508 parameters | Δρmin = −0.67 e Å−3 |
45 restraints |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
x | y | z | Uiso*/Ueq | ||
Cl1 | 0.70828 (4) | 0.44966 (3) | 0.10654 (2) | 0.02287 (8) | |
Cl2 | 0.36722 (5) | 0.81273 (4) | 0.47669 (2) | 0.03148 (10) | |
N1 | 1.06087 (12) | 0.41493 (9) | 0.30022 (7) | 0.01281 (18) | |
N2 | 1.01796 (12) | 0.51703 (9) | 0.29532 (6) | 0.01148 (18) | |
N3 | 0.91361 (12) | 0.52776 (9) | 0.33271 (6) | 0.01127 (18) | |
N4 | 0.88812 (12) | 0.43342 (9) | 0.36428 (7) | 0.01265 (18) | |
C1 | 0.98037 (13) | 0.36431 (10) | 0.34357 (7) | 0.0119 (2) | |
C2 | 0.99419 (14) | 0.24860 (10) | 0.36518 (7) | 0.0127 (2) | |
C3 | 1.11278 (15) | 0.19497 (12) | 0.35379 (8) | 0.0168 (2) | |
H3 | 1.184221 | 0.234181 | 0.333244 | 0.020* | |
C4 | 1.12526 (17) | 0.08350 (12) | 0.37282 (9) | 0.0207 (3) | |
H4 | 1.206066 | 0.046687 | 0.365849 | 0.025* | |
C5 | 1.01958 (19) | 0.02616 (12) | 0.40200 (9) | 0.0226 (3) | |
H5 | 1.027171 | −0.050537 | 0.413628 | 0.027* | |
C6 | 0.90284 (18) | 0.08019 (12) | 0.41429 (8) | 0.0204 (3) | |
H6 | 0.831886 | 0.040812 | 0.435081 | 0.025* | |
C7 | 0.88968 (15) | 0.19187 (11) | 0.39619 (8) | 0.0154 (2) | |
H7 | 0.810327 | 0.229196 | 0.404859 | 0.019* | |
C8 | 1.08402 (13) | 0.60275 (10) | 0.25710 (7) | 0.0118 (2) | |
C9 | 1.10553 (15) | 0.56581 (12) | 0.18416 (8) | 0.0153 (2) | |
H9 | 1.070334 | 0.490211 | 0.159463 | 0.018* | |
C10 | 1.18016 (16) | 0.64285 (13) | 0.14837 (8) | 0.0186 (2) | |
H10 | 1.197734 | 0.619924 | 0.098701 | 0.022* | |
C11 | 1.22917 (15) | 0.75340 (13) | 0.18512 (9) | 0.0195 (3) | |
H11 | 1.279070 | 0.806102 | 0.160079 | 0.023* | |
C12 | 1.20566 (15) | 0.78746 (12) | 0.25834 (9) | 0.0177 (2) | |
H12 | 1.239657 | 0.863305 | 0.282850 | 0.021* | |
C13 | 1.13283 (14) | 0.71156 (11) | 0.29605 (8) | 0.0145 (2) | |
H13 | 1.117314 | 0.733548 | 0.346380 | 0.017* | |
C14 | 0.83772 (14) | 0.62624 (10) | 0.33853 (7) | 0.0122 (2) | |
C15 | 0.77717 (15) | 0.67406 (12) | 0.27005 (8) | 0.0160 (2) | |
H15 | 0.786806 | 0.643983 | 0.219891 | 0.019* | |
C16 | 0.70196 (16) | 0.76752 (13) | 0.27755 (9) | 0.0210 (3) | |
H16 | 0.661365 | 0.803899 | 0.232134 | 0.025* | |
C17 | 0.68564 (17) | 0.80833 (13) | 0.35140 (10) | 0.0233 (3) | |
H17 | 0.632602 | 0.871611 | 0.355801 | 0.028* | |
C18 | 0.74620 (18) | 0.75730 (13) | 0.41848 (9) | 0.0228 (3) | |
H18 | 0.733652 | 0.785380 | 0.468421 | 0.027* | |
C19 | 0.82497 (16) | 0.66550 (12) | 0.41304 (8) | 0.0176 (2) | |
H19 | 0.868633 | 0.630747 | 0.458692 | 0.021* | |
N5 | 0.34121 (12) | 0.77429 (9) | 0.78463 (6) | 0.01196 (18) | |
N6 | 0.45974 (12) | 0.72436 (9) | 0.79383 (6) | 0.01103 (17) | |
N7 | 0.54655 (11) | 0.75476 (9) | 0.86647 (6) | 0.01081 (17) | |
N8 | 0.48642 (12) | 0.82506 (9) | 0.90686 (6) | 0.01171 (18) | |
C20 | 0.35971 (13) | 0.83685 (10) | 0.85526 (7) | 0.01125 (19) | |
C21 | 0.25809 (14) | 0.91367 (11) | 0.87263 (7) | 0.0126 (2) | |
C22 | 0.16689 (15) | 0.95904 (12) | 0.81057 (8) | 0.0167 (2) | |
H22 | 0.168326 | 0.937903 | 0.757308 | 0.020* | |
C23 | 0.07367 (18) | 1.03559 (13) | 0.82727 (10) | 0.0233 (3) | |
H23 | 0.011239 | 1.067061 | 0.785300 | 0.028* | |
C24 | 0.07175 (18) | 1.06608 (14) | 0.90525 (10) | 0.0257 (3) | |
H24 | 0.007532 | 1.117997 | 0.916441 | 0.031* | |
C25 | 0.16344 (17) | 1.02088 (13) | 0.96690 (9) | 0.0214 (3) | |
H25 | 0.161744 | 1.042165 | 1.020099 | 0.026* | |
C26 | 0.25762 (15) | 0.94473 (12) | 0.95119 (8) | 0.0164 (2) | |
H26 | 0.320861 | 0.914190 | 0.993332 | 0.020* | |
C27 | 0.49263 (13) | 0.64728 (11) | 0.73433 (7) | 0.0121 (2) | |
C28 | 0.52080 (14) | 0.53771 (11) | 0.75180 (8) | 0.0153 (2) | |
H28 | 0.517685 | 0.512997 | 0.801599 | 0.018* | |
C29 | 0.55378 (15) | 0.46552 (13) | 0.69343 (9) | 0.0200 (3) | |
H29 | 0.573212 | 0.389835 | 0.703092 | 0.024* | |
C30 | 0.55841 (16) | 0.50361 (15) | 0.62116 (9) | 0.0237 (3) | |
H30 | 0.582347 | 0.454021 | 0.582032 | 0.028* | |
C31 | 0.52840 (17) | 0.61350 (15) | 0.60550 (8) | 0.0224 (3) | |
H31 | 0.530920 | 0.638198 | 0.555610 | 0.027* | |
C32 | 0.49462 (15) | 0.68766 (13) | 0.66259 (8) | 0.0169 (2) | |
H32 | 0.473763 | 0.762990 | 0.652720 | 0.020* | |
C33 | 0.69328 (13) | 0.72747 (11) | 0.89345 (7) | 0.01130 (19) | |
C34 | 0.79458 (14) | 0.76919 (12) | 0.85529 (8) | 0.0147 (2) | |
H34 | 0.767638 | 0.812168 | 0.811542 | 0.018* | |
C35 | 0.93677 (14) | 0.74586 (13) | 0.88334 (8) | 0.0176 (2) | |
H35 | 1.008994 | 0.772656 | 0.858364 | 0.021* | |
C36 | 0.97440 (15) | 0.68333 (13) | 0.94797 (8) | 0.0184 (2) | |
H36 | 1.072249 | 0.668184 | 0.966914 | 0.022* | |
C37 | 0.86978 (15) | 0.64294 (13) | 0.98493 (8) | 0.0181 (2) | |
H37 | 0.896309 | 0.600303 | 1.028887 | 0.022* | |
C38 | 0.72645 (14) | 0.66494 (12) | 0.95758 (8) | 0.0149 (2) | |
H38 | 0.653676 | 0.637922 | 0.982119 | 0.018* | |
O1 | 0.83271 (13) | 0.41876 (10) | 0.53365 (6) | 0.0209 (2) | |
H1W | 0.780 (2) | 0.3554 (14) | 0.5308 (14) | 0.031* | |
H2W | 0.828 (3) | 0.430 (2) | 0.4856 (9) | 0.031* | |
O2 | 0.53149 (13) | 0.99355 (10) | 0.61966 (6) | 0.0212 (2) | |
H3W | 0.484 (2) | 0.9458 (17) | 0.5819 (11) | 0.032* | |
H4W | 0.558 (3) | 1.0481 (16) | 0.5968 (13) | 0.032* | |
O3 | 0.57974 (15) | 0.96751 (10) | 0.78259 (7) | 0.0254 (2) | |
H5W | 0.564 (3) | 0.980 (2) | 0.7343 (9) | 0.038* | |
H6W | 0.556 (3) | 1.0222 (17) | 0.8094 (13) | 0.038* | |
O4 | 0.46846 (15) | 0.62378 (11) | 0.07228 (8) | 0.0277 (2) | |
H7W | 0.420 (3) | 0.605 (2) | 0.0242 (9) | 0.041* | |
H8W | 0.533 (2) | 0.5782 (19) | 0.0806 (15) | 0.041* | |
O5 | 0.49505 (13) | 1.14221 (10) | 0.89204 (7) | 0.0219 (2) | |
H9W | 0.502 (3) | 1.2147 (12) | 0.9044 (14) | 0.033* | |
H10W | 0.435 (2) | 1.1154 (19) | 0.9169 (13) | 0.033* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cl1 | 0.02495 (17) | 0.01712 (15) | 0.02952 (18) | −0.00068 (12) | 0.01420 (14) | 0.00123 (12) |
Cl2 | 0.0403 (2) | 0.0297 (2) | 0.01840 (16) | −0.01646 (17) | 0.00415 (15) | 0.00281 (13) |
N1 | 0.0144 (5) | 0.0092 (4) | 0.0156 (5) | 0.0019 (3) | 0.0053 (4) | 0.0011 (3) |
N2 | 0.0119 (4) | 0.0099 (4) | 0.0132 (4) | 0.0011 (3) | 0.0047 (3) | 0.0006 (3) |
N3 | 0.0112 (4) | 0.0095 (4) | 0.0137 (4) | 0.0012 (3) | 0.0044 (3) | 0.0010 (3) |
N4 | 0.0132 (5) | 0.0093 (4) | 0.0157 (5) | 0.0009 (3) | 0.0041 (4) | 0.0019 (3) |
C1 | 0.0115 (5) | 0.0101 (5) | 0.0136 (5) | 0.0010 (4) | 0.0031 (4) | 0.0003 (4) |
C2 | 0.0143 (5) | 0.0089 (5) | 0.0141 (5) | 0.0014 (4) | 0.0024 (4) | 0.0008 (4) |
C3 | 0.0162 (6) | 0.0147 (5) | 0.0191 (6) | 0.0041 (4) | 0.0034 (4) | 0.0001 (4) |
C4 | 0.0234 (7) | 0.0164 (6) | 0.0212 (6) | 0.0087 (5) | 0.0017 (5) | 0.0005 (5) |
C5 | 0.0344 (8) | 0.0123 (6) | 0.0197 (6) | 0.0065 (5) | 0.0023 (6) | 0.0040 (5) |
C6 | 0.0301 (7) | 0.0132 (5) | 0.0172 (6) | −0.0009 (5) | 0.0055 (5) | 0.0033 (4) |
C7 | 0.0182 (6) | 0.0128 (5) | 0.0148 (5) | 0.0005 (4) | 0.0039 (4) | 0.0014 (4) |
C8 | 0.0110 (5) | 0.0104 (5) | 0.0141 (5) | −0.0001 (4) | 0.0035 (4) | 0.0027 (4) |
C9 | 0.0155 (6) | 0.0155 (5) | 0.0151 (5) | 0.0002 (4) | 0.0051 (4) | 0.0013 (4) |
C10 | 0.0174 (6) | 0.0224 (6) | 0.0176 (6) | 0.0010 (5) | 0.0071 (5) | 0.0057 (5) |
C11 | 0.0141 (6) | 0.0202 (6) | 0.0249 (6) | −0.0008 (5) | 0.0053 (5) | 0.0094 (5) |
C12 | 0.0153 (6) | 0.0126 (5) | 0.0240 (6) | −0.0014 (4) | 0.0036 (5) | 0.0031 (5) |
C13 | 0.0131 (5) | 0.0121 (5) | 0.0171 (5) | 0.0004 (4) | 0.0025 (4) | 0.0008 (4) |
C14 | 0.0113 (5) | 0.0095 (5) | 0.0155 (5) | 0.0017 (4) | 0.0028 (4) | 0.0001 (4) |
C15 | 0.0141 (5) | 0.0162 (5) | 0.0168 (5) | 0.0031 (4) | 0.0017 (4) | 0.0026 (4) |
C16 | 0.0168 (6) | 0.0173 (6) | 0.0272 (7) | 0.0054 (5) | 0.0001 (5) | 0.0053 (5) |
C17 | 0.0188 (6) | 0.0154 (6) | 0.0339 (8) | 0.0072 (5) | 0.0036 (6) | −0.0023 (5) |
C18 | 0.0247 (7) | 0.0195 (6) | 0.0238 (7) | 0.0064 (5) | 0.0067 (5) | −0.0054 (5) |
C19 | 0.0198 (6) | 0.0168 (6) | 0.0162 (5) | 0.0057 (5) | 0.0041 (5) | −0.0012 (4) |
N5 | 0.0105 (4) | 0.0126 (4) | 0.0125 (4) | 0.0020 (3) | 0.0026 (3) | 0.0003 (3) |
N6 | 0.0102 (4) | 0.0119 (4) | 0.0098 (4) | 0.0003 (3) | 0.0012 (3) | −0.0002 (3) |
N7 | 0.0093 (4) | 0.0126 (4) | 0.0097 (4) | −0.0001 (3) | 0.0022 (3) | −0.0008 (3) |
N8 | 0.0100 (4) | 0.0132 (4) | 0.0118 (4) | 0.0004 (3) | 0.0037 (3) | −0.0005 (3) |
C20 | 0.0104 (5) | 0.0112 (5) | 0.0121 (5) | −0.0004 (4) | 0.0037 (4) | 0.0006 (4) |
C21 | 0.0112 (5) | 0.0115 (5) | 0.0146 (5) | 0.0005 (4) | 0.0036 (4) | −0.0014 (4) |
C22 | 0.0182 (6) | 0.0145 (5) | 0.0170 (5) | 0.0042 (4) | 0.0037 (5) | 0.0005 (4) |
C23 | 0.0243 (7) | 0.0189 (6) | 0.0261 (7) | 0.0102 (5) | 0.0037 (6) | 0.0000 (5) |
C24 | 0.0239 (7) | 0.0206 (7) | 0.0320 (8) | 0.0076 (5) | 0.0079 (6) | −0.0086 (6) |
C25 | 0.0191 (6) | 0.0226 (7) | 0.0216 (6) | 0.0007 (5) | 0.0078 (5) | −0.0085 (5) |
C26 | 0.0138 (5) | 0.0192 (6) | 0.0147 (5) | −0.0001 (4) | 0.0034 (4) | −0.0031 (4) |
C27 | 0.0099 (5) | 0.0141 (5) | 0.0115 (5) | 0.0005 (4) | 0.0028 (4) | −0.0028 (4) |
C28 | 0.0120 (5) | 0.0148 (5) | 0.0178 (5) | 0.0012 (4) | 0.0026 (4) | −0.0010 (4) |
C29 | 0.0137 (6) | 0.0188 (6) | 0.0245 (6) | 0.0038 (5) | 0.0020 (5) | −0.0070 (5) |
C30 | 0.0152 (6) | 0.0338 (8) | 0.0194 (6) | 0.0061 (5) | 0.0030 (5) | −0.0111 (6) |
C31 | 0.0188 (6) | 0.0358 (8) | 0.0124 (5) | 0.0046 (6) | 0.0048 (5) | −0.0026 (5) |
C32 | 0.0150 (6) | 0.0224 (6) | 0.0124 (5) | 0.0022 (5) | 0.0029 (4) | 0.0004 (4) |
C33 | 0.0086 (5) | 0.0132 (5) | 0.0114 (5) | 0.0003 (4) | 0.0022 (4) | −0.0005 (4) |
C34 | 0.0129 (5) | 0.0172 (5) | 0.0133 (5) | −0.0023 (4) | 0.0041 (4) | 0.0002 (4) |
C35 | 0.0106 (5) | 0.0225 (6) | 0.0188 (6) | −0.0032 (4) | 0.0057 (4) | −0.0029 (5) |
C36 | 0.0105 (5) | 0.0223 (6) | 0.0201 (6) | 0.0021 (5) | 0.0019 (4) | −0.0032 (5) |
C37 | 0.0146 (6) | 0.0211 (6) | 0.0169 (6) | 0.0031 (5) | 0.0003 (4) | 0.0034 (5) |
C38 | 0.0124 (5) | 0.0176 (6) | 0.0148 (5) | 0.0010 (4) | 0.0037 (4) | 0.0033 (4) |
O1 | 0.0232 (5) | 0.0212 (5) | 0.0167 (4) | −0.0017 (4) | 0.0049 (4) | 0.0001 (4) |
O2 | 0.0286 (6) | 0.0174 (5) | 0.0175 (5) | 0.0028 (4) | 0.0063 (4) | 0.0006 (4) |
O3 | 0.0351 (6) | 0.0179 (5) | 0.0252 (5) | 0.0014 (4) | 0.0106 (5) | 0.0064 (4) |
O4 | 0.0305 (6) | 0.0227 (5) | 0.0326 (6) | 0.0015 (5) | 0.0165 (5) | −0.0037 (5) |
O5 | 0.0256 (5) | 0.0187 (5) | 0.0214 (5) | −0.0009 (4) | 0.0070 (4) | 0.0037 (4) |
N1—N2 | 1.3120 (15) | N7—C33 | 1.4395 (16) |
N1—C1 | 1.3455 (16) | N8—C20 | 1.3442 (16) |
N2—N3 | 1.3341 (14) | C20—C21 | 1.4586 (17) |
N2—C8 | 1.4415 (16) | C21—C22 | 1.3927 (19) |
N3—N4 | 1.3137 (15) | C21—C26 | 1.3965 (18) |
N3—C14 | 1.4370 (16) | C22—C23 | 1.391 (2) |
N4—C1 | 1.3500 (16) | C22—H22 | 0.9500 |
C1—C2 | 1.4569 (17) | C23—C24 | 1.389 (2) |
C2—C7 | 1.3966 (18) | C23—H23 | 0.9500 |
C2—C3 | 1.3979 (18) | C24—C25 | 1.389 (2) |
C3—C4 | 1.393 (2) | C24—H24 | 0.9500 |
C3—H3 | 0.9500 | C25—C26 | 1.389 (2) |
C4—C5 | 1.389 (2) | C25—H25 | 0.9500 |
C4—H4 | 0.9500 | C26—H26 | 0.9500 |
C5—C6 | 1.390 (2) | C27—C32 | 1.3858 (18) |
C5—H5 | 0.9500 | C27—C28 | 1.3893 (19) |
C6—C7 | 1.3914 (19) | C28—C29 | 1.3927 (19) |
C6—H6 | 0.9500 | C28—H28 | 0.9500 |
C7—H7 | 0.9500 | C29—C30 | 1.389 (2) |
C8—C13 | 1.3835 (17) | C29—H29 | 0.9500 |
C8—C9 | 1.3870 (18) | C30—C31 | 1.390 (2) |
C9—C10 | 1.3886 (19) | C30—H30 | 0.9500 |
C9—H9 | 0.9500 | C31—C32 | 1.3934 (19) |
C10—C11 | 1.389 (2) | C31—H31 | 0.9500 |
C10—H10 | 0.9500 | C32—H32 | 0.9500 |
C11—C12 | 1.391 (2) | C33—C38 | 1.3834 (18) |
C11—H11 | 0.9500 | C33—C34 | 1.3854 (17) |
C12—C13 | 1.3922 (19) | C34—C35 | 1.3866 (19) |
C12—H12 | 0.9500 | C34—H34 | 0.9500 |
C13—H13 | 0.9500 | C35—C36 | 1.394 (2) |
C14—C15 | 1.3859 (18) | C35—H35 | 0.9500 |
C14—C19 | 1.3877 (18) | C36—C37 | 1.391 (2) |
C15—C16 | 1.387 (2) | C36—H36 | 0.9500 |
C15—H15 | 0.9500 | C37—C38 | 1.3902 (19) |
C16—C17 | 1.394 (2) | C37—H37 | 0.9500 |
C16—H16 | 0.9500 | C38—H38 | 0.9500 |
C17—C18 | 1.387 (2) | O1—H1W | 0.851 (14) |
C17—H17 | 0.9500 | O1—H2W | 0.853 (14) |
C18—C19 | 1.387 (2) | O2—H3W | 0.836 (14) |
C18—H18 | 0.9500 | O2—H4W | 0.838 (14) |
C19—H19 | 0.9500 | O3—H5W | 0.849 (14) |
N5—N6 | 1.3066 (15) | O3—H6W | 0.849 (14) |
N5—C20 | 1.3498 (16) | O4—H7W | 0.852 (14) |
N6—N7 | 1.3324 (14) | O4—H8W | 0.849 (14) |
N6—C27 | 1.4404 (16) | O5—H9W | 0.857 (14) |
N7—N8 | 1.3103 (14) | O5—H10W | 0.854 (14) |
N2—N1—C1 | 103.93 (10) | N7—N6—C27 | 124.54 (10) |
N1—N2—N3 | 110.20 (10) | N8—N7—N6 | 110.23 (10) |
N1—N2—C8 | 122.11 (10) | N8—N7—C33 | 124.23 (10) |
N3—N2—C8 | 127.63 (10) | N6—N7—C33 | 125.03 (10) |
N4—N3—N2 | 109.93 (10) | N7—N8—C20 | 103.56 (10) |
N4—N3—C14 | 123.73 (10) | N8—C20—N5 | 112.38 (11) |
N2—N3—C14 | 126.34 (10) | N8—C20—C21 | 123.45 (11) |
N3—N4—C1 | 103.88 (10) | N5—C20—C21 | 124.09 (11) |
N1—C1—N4 | 112.03 (11) | C22—C21—C26 | 120.79 (12) |
N1—C1—C2 | 122.91 (11) | C22—C21—C20 | 119.33 (11) |
N4—C1—C2 | 125.05 (11) | C26—C21—C20 | 119.83 (12) |
C7—C2—C3 | 120.57 (12) | C23—C22—C21 | 119.41 (13) |
C7—C2—C1 | 120.39 (11) | C23—C22—H22 | 120.3 |
C3—C2—C1 | 119.04 (12) | C21—C22—H22 | 120.3 |
C4—C3—C2 | 119.40 (13) | C24—C23—C22 | 120.09 (15) |
C4—C3—H3 | 120.3 | C24—C23—H23 | 120.0 |
C2—C3—H3 | 120.3 | C22—C23—H23 | 120.0 |
C5—C4—C3 | 120.02 (13) | C25—C24—C23 | 120.21 (14) |
C5—C4—H4 | 120.0 | C25—C24—H24 | 119.9 |
C3—C4—H4 | 120.0 | C23—C24—H24 | 119.9 |
C4—C5—C6 | 120.46 (13) | C24—C25—C26 | 120.37 (13) |
C4—C5—H5 | 119.8 | C24—C25—H25 | 119.8 |
C6—C5—H5 | 119.8 | C26—C25—H25 | 119.8 |
C5—C6—C7 | 120.12 (14) | C25—C26—C21 | 119.12 (13) |
C5—C6—H6 | 119.9 | C25—C26—H26 | 120.4 |
C7—C6—H6 | 119.9 | C21—C26—H26 | 120.4 |
C6—C7—C2 | 119.40 (13) | C32—C27—C28 | 123.81 (12) |
C6—C7—H7 | 120.3 | C32—C27—N6 | 117.50 (12) |
C2—C7—H7 | 120.3 | C28—C27—N6 | 118.68 (11) |
C13—C8—C9 | 123.75 (12) | C27—C28—C29 | 117.38 (13) |
C13—C8—N2 | 120.11 (11) | C27—C28—H28 | 121.3 |
C9—C8—N2 | 115.91 (11) | C29—C28—H28 | 121.3 |
C8—C9—C10 | 117.88 (12) | C30—C29—C28 | 120.35 (14) |
C8—C9—H9 | 121.1 | C30—C29—H29 | 119.8 |
C10—C9—H9 | 121.1 | C28—C29—H29 | 119.8 |
C9—C10—C11 | 120.09 (13) | C29—C30—C31 | 120.68 (13) |
C9—C10—H10 | 120.0 | C29—C30—H30 | 119.7 |
C11—C10—H10 | 120.0 | C31—C30—H30 | 119.7 |
C10—C11—C12 | 120.44 (13) | C30—C31—C32 | 120.33 (14) |
C10—C11—H11 | 119.8 | C30—C31—H31 | 119.8 |
C12—C11—H11 | 119.8 | C32—C31—H31 | 119.8 |
C11—C12—C13 | 120.70 (13) | C27—C32—C31 | 117.43 (14) |
C11—C12—H12 | 119.7 | C27—C32—H32 | 121.3 |
C13—C12—H12 | 119.7 | C31—C32—H32 | 121.3 |
C8—C13—C12 | 117.14 (12) | C38—C33—C34 | 123.74 (12) |
C8—C13—H13 | 121.4 | C38—C33—N7 | 118.40 (11) |
C12—C13—H13 | 121.4 | C34—C33—N7 | 117.82 (11) |
C15—C14—C19 | 123.67 (12) | C33—C34—C35 | 117.50 (12) |
C15—C14—N3 | 118.95 (11) | C33—C34—H34 | 121.3 |
C19—C14—N3 | 117.34 (11) | C35—C34—H34 | 121.3 |
C14—C15—C16 | 117.46 (13) | C34—C35—C36 | 120.40 (12) |
C14—C15—H15 | 121.3 | C34—C35—H35 | 119.8 |
C16—C15—H15 | 121.3 | C36—C35—H35 | 119.8 |
C15—C16—C17 | 120.35 (14) | C37—C36—C35 | 120.51 (13) |
C15—C16—H16 | 119.8 | C37—C36—H36 | 119.7 |
C17—C16—H16 | 119.8 | C35—C36—H36 | 119.7 |
C18—C17—C16 | 120.54 (13) | C38—C37—C36 | 120.04 (13) |
C18—C17—H17 | 119.7 | C38—C37—H37 | 120.0 |
C16—C17—H17 | 119.7 | C36—C37—H37 | 120.0 |
C19—C18—C17 | 120.35 (14) | C33—C38—C37 | 117.80 (12) |
C19—C18—H18 | 119.8 | C33—C38—H38 | 121.1 |
C17—C18—H18 | 119.8 | C37—C38—H38 | 121.1 |
C18—C19—C14 | 117.61 (13) | H1W—O1—H2W | 105 (2) |
C18—C19—H19 | 121.2 | H3W—O2—H4W | 103 (2) |
C14—C19—H19 | 121.2 | H5W—O3—H6W | 110 (2) |
N6—N5—C20 | 103.54 (10) | H7W—O4—H8W | 105 (2) |
N5—N6—N7 | 110.29 (10) | H9W—O5—H10W | 103 (2) |
N5—N6—C27 | 125.17 (10) | ||
C1—N1—N2—N3 | −1.18 (13) | C20—N5—N6—N7 | 0.02 (13) |
C1—N1—N2—C8 | 176.26 (11) | C20—N5—N6—C27 | 179.94 (11) |
N1—N2—N3—N4 | 1.26 (14) | N5—N6—N7—N8 | 0.34 (14) |
C8—N2—N3—N4 | −175.99 (11) | C27—N6—N7—N8 | −179.58 (11) |
N1—N2—N3—C14 | −178.51 (11) | N5—N6—N7—C33 | −171.74 (11) |
C8—N2—N3—C14 | 4.2 (2) | C27—N6—N7—C33 | 8.34 (18) |
N2—N3—N4—C1 | −0.74 (13) | N6—N7—N8—C20 | −0.53 (13) |
C14—N3—N4—C1 | 179.04 (11) | C33—N7—N8—C20 | 171.62 (11) |
N2—N1—C1—N4 | 0.73 (14) | N7—N8—C20—N5 | 0.56 (14) |
N2—N1—C1—C2 | −178.88 (11) | N7—N8—C20—C21 | −176.25 (11) |
N3—N4—C1—N1 | 0.00 (14) | N6—N5—C20—N8 | −0.37 (14) |
N3—N4—C1—C2 | 179.60 (12) | N6—N5—C20—C21 | 176.42 (11) |
N1—C1—C2—C7 | −167.19 (12) | N8—C20—C21—C22 | 152.30 (13) |
N4—C1—C2—C7 | 13.25 (19) | N5—C20—C21—C22 | −24.14 (19) |
N1—C1—C2—C3 | 12.26 (19) | N8—C20—C21—C26 | −24.95 (19) |
N4—C1—C2—C3 | −167.30 (13) | N5—C20—C21—C26 | 158.61 (12) |
C7—C2—C3—C4 | 0.7 (2) | C26—C21—C22—C23 | −0.4 (2) |
C1—C2—C3—C4 | −178.73 (12) | C20—C21—C22—C23 | −177.66 (13) |
C2—C3—C4—C5 | 0.7 (2) | C21—C22—C23—C24 | −0.1 (2) |
C3—C4—C5—C6 | −1.6 (2) | C22—C23—C24—C25 | 0.4 (3) |
C4—C5—C6—C7 | 1.0 (2) | C23—C24—C25—C26 | −0.1 (2) |
C5—C6—C7—C2 | 0.4 (2) | C24—C25—C26—C21 | −0.4 (2) |
C3—C2—C7—C6 | −1.3 (2) | C22—C21—C26—C25 | 0.7 (2) |
C1—C2—C7—C6 | 178.16 (12) | C20—C21—C26—C25 | 177.93 (12) |
N1—N2—C8—C13 | −128.71 (13) | N5—N6—C27—C32 | 57.53 (17) |
N3—N2—C8—C13 | 48.25 (18) | N7—N6—C27—C32 | −122.57 (13) |
N1—N2—C8—C9 | 45.93 (17) | N5—N6—C27—C28 | −122.66 (14) |
N3—N2—C8—C9 | −137.11 (13) | N7—N6—C27—C28 | 57.24 (17) |
C13—C8—C9—C10 | −0.1 (2) | C32—C27—C28—C29 | 0.5 (2) |
N2—C8—C9—C10 | −174.54 (12) | N6—C27—C28—C29 | −179.33 (12) |
C8—C9—C10—C11 | −0.8 (2) | C27—C28—C29—C30 | 0.3 (2) |
C9—C10—C11—C12 | 0.8 (2) | C28—C29—C30—C31 | −0.9 (2) |
C10—C11—C12—C13 | 0.0 (2) | C29—C30—C31—C32 | 0.7 (2) |
C9—C8—C13—C12 | 0.9 (2) | C28—C27—C32—C31 | −0.6 (2) |
N2—C8—C13—C12 | 175.12 (12) | N6—C27—C32—C31 | 179.15 (12) |
C11—C12—C13—C8 | −0.9 (2) | C30—C31—C32—C27 | 0.1 (2) |
N4—N3—C14—C15 | −129.44 (13) | N8—N7—C33—C38 | 68.04 (16) |
N2—N3—C14—C15 | 50.30 (18) | N6—N7—C33—C38 | −120.96 (13) |
N4—N3—C14—C19 | 48.26 (17) | N8—N7—C33—C34 | −109.63 (14) |
N2—N3—C14—C19 | −132.00 (13) | N6—N7—C33—C34 | 61.37 (17) |
C19—C14—C15—C16 | 1.1 (2) | C38—C33—C34—C35 | 0.3 (2) |
N3—C14—C15—C16 | 178.63 (12) | N7—C33—C34—C35 | 177.85 (11) |
C14—C15—C16—C17 | −1.8 (2) | C33—C34—C35—C36 | −0.5 (2) |
C15—C16—C17—C18 | 1.0 (2) | C34—C35—C36—C37 | 0.4 (2) |
C16—C17—C18—C19 | 0.6 (2) | C35—C36—C37—C38 | −0.1 (2) |
C17—C18—C19—C14 | −1.3 (2) | C34—C33—C38—C37 | −0.1 (2) |
C15—C14—C19—C18 | 0.4 (2) | N7—C33—C38—C37 | −177.58 (12) |
N3—C14—C19—C18 | −177.15 (13) | C36—C37—C38—C33 | −0.1 (2) |
Cg6 is the centroid of the C21–C26 ring. |
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1W···Cl2i | 0.85 (1) | 2.30 (1) | 3.1483 (12) | 178 (2) |
O1—H2W···N4 | 0.85 (1) | 2.34 (2) | 3.1605 (15) | 160 (2) |
O2—H3W···Cl2 | 0.84 (1) | 2.30 (1) | 3.1302 (12) | 176 (2) |
O2—H4W···Cl2ii | 0.84 (1) | 2.34 (1) | 3.1740 (12) | 175 (2) |
O3—H5W···O2 | 0.85 (1) | 1.98 (1) | 2.8246 (16) | 175 (2) |
O3—H6W···O5 | 0.85 (1) | 2.16 (2) | 3.0040 (17) | 171 (2) |
O4—H7W···Cl1iii | 0.85 (1) | 2.32 (2) | 3.1687 (14) | 179 (3) |
O4—H8W···Cl1 | 0.85 (1) | 2.35 (2) | 3.2008 (14) | 178 (2) |
O5—H9W···O4ii | 0.86 (1) | 1.90 (1) | 2.7503 (17) | 175 (2) |
O5—H10W···Cg6 | 0.85 (1) | 2.76 (2) | 3.4646 (14) | 141 (2) |
C4—H4···O2iv | 0.95 | 2.55 | 3.461 (2) | 160 |
C11—H11···O5v | 0.95 | 2.59 | 3.429 (2) | 147 |
C15—H15···Cl1 | 0.95 | 2.82 | 3.6219 (14) | 143 |
C16—H16···O5ii | 0.95 | 2.48 | 3.4084 (19) | 165 |
C17—H17···O2ii | 0.95 | 2.42 | 3.359 (2) | 168 |
C26—H26···O5vi | 0.95 | 2.50 | 3.4440 (19) | 173 |
Symmetry codes: (i) −x+1, −y+1, −z+1; (ii) −x+1, −y+2, −z+1; (iii) −x+1, −y+1, −z; (iv) −x+2, −y+1, −z+1; (v) −x+2, −y+2, −z+1; (vi) −x+1, −y+2, −z+2. |
Funding information
Research reported in this publication was supported by the National Science Foundation (NSF) under grant No. 1736136, CREST Center for Next Generation Multifunctional Composites (NextGen Composites Phase II). Purchase of the diffractometer was funded by NSF MRI award CHE-2215262. The contents of this article are solely the responsibility of authors and do not represent the official views of the NSF.
References
Allen, F. H., Howard, J. A. K., Hoy, V. J., Desiraju, G. R., Reddy, D. S. & Wilson, C. C. (1996). J. Am. Chem. Soc. 118, 4081–4084. CSD CrossRef CAS Web of Science Google Scholar
Bruker (2022). APEX4 and SAINT. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Chikkula, K. V., Hines, J. E. IIIrd, Babu, S., Fronczek, F. R. & Uppu, R. M. (2023). CSD Communication (No. 2314756). CCDC Cambridge, England. https://doi.org/10.5517/ccdc.csd.cc2hppkg Google Scholar
Clemensson-Lindell, A. (1994). Plant Soil, 159, 297–300. CAS Google Scholar
Di Mino, C., Seel, A. G., Clancy, A. J., Headen, T. F., Földes, T., Rosta, E., Sella, A. & Skipper, N. T. (2023). Nat. Commun. 14, 5900. CrossRef PubMed Google Scholar
Etter, M. C., MacDonald, J. C. & Bernstein, J. (1990). Acta Cryst. B46, 256–262. CrossRef ICSD CAS Web of Science IUCr Journals Google Scholar
França-Neto, J. D. & Krzyzanowski, F. C. (2019). J. Seed Sci. 41, 359–366. Google Scholar
Frost, H. R., Tsoi, S. K., Baker, C. A., Laho, D., Sanderson-Smith, M. L., Steer, A. C. & Smeesters, P. R. (2016). BMC Res. Notes, 9, 72. Google Scholar
Fun, H.-K., Chia, T. S., Mostafa, G. A. E., Abunassif, M. M. & Abdel-Aziz, H. A. (2012b). Acta Cryst. E68, o2621. CrossRef IUCr Journals Google Scholar
Fun, H.-K., Chia, T. S., Mostafa, G. A. E., Hefnawy, M. M. & Abdel-Aziz, H. A. (2012a). Acta Cryst. E68, o2566. CrossRef IUCr Journals Google Scholar
Golovanov, D. G., Perekalin, D. S., Yakovenko, A. A., Antipin, M. Y. & Lyssenko, K. A. (2005). Mendeleev Commun. 15, 237–239. CrossRef Google Scholar
Groom, C. R., Bruno, I. J., Lightfoot, M. P. & Ward, S. C. (2016). Acta Cryst. B72, 171–179. Web of Science CrossRef IUCr Journals Google Scholar
Jaconis, S. Y., Thompson, A. J. E., Smith, S. L., Trimarchi, C., Cottee, N. S., Bange, M. P. & Conaty, W. C. (2021). Sci. Rep. 11, 5419. CrossRef PubMed Google Scholar
Krause, L., Herbst-Irmer, R., Sheldrick, G. M. & Stalke, D. (2015). J. Appl. Cryst. 48, 3–10. Web of Science CSD CrossRef ICSD CAS IUCr Journals Google Scholar
Ling, K. H., Su, T. C. & Tung, T. C. (1957). Arch. Biochem. Biophys. 71, 126–129. CrossRef PubMed CAS Google Scholar
Macrae, C. F., Sovago, I., Cottrell, S. J., Galek, P. T. A., McCabe, P., Pidcock, E., Platings, M., Shields, G. P., Stevens, J. S., Towler, M. & Wood, P. A. (2020). J. Appl. Cryst. 53, 226–235. Web of Science CrossRef CAS IUCr Journals Google Scholar
Rich, P. R., Mischis, L. A., Purton, S. & Wiskich, J. T. (2001). FEMS Microbiol. Lett. 202, 181–187. CrossRef PubMed CAS Google Scholar
Sanchez-Bezanilla, S., Hood, R. J., Collins-Praino, L. E., Turner, R. J., Walker, F. R., Nilsson, M. & Ong, L. K. (2021). J. Cereb. Blood Flow Metab. 41, 2439–2455. CAS PubMed Google Scholar
Sheldrick, G. M. (2015a). Acta Cryst. A71, 3–8. Web of Science CrossRef IUCr Journals Google Scholar
Sheldrick, G. M. (2015b). Acta Cryst. C71, 3–8. Web of Science CrossRef IUCr Journals Google Scholar
Sierra-Zapata, L., Álvarez, J. C., Romero-Tabarez, M., Silby, M. W., Traxler, M. F., Behie, S. W., Pessotti, R. C. & Villegas-Escobar, V. (2020). Sci. Rep. 10, 5563. PubMed Google Scholar
Westrip, S. P. (2010). J. Appl. Cryst. 43, 920–925. Web of Science CrossRef CAS IUCr Journals Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.