research communications
Syntheses and crystal structures of the 2,6.08,10]dodec-11-ene-3,5-dione
4-(2-phenylethyl)- and 4-[2-(4-hydroxyphenyl)ethyl]-4-azatetracyclo[5.3.2.0aDepartment of Chemistry, Grand Valley State University, Allendale, MI 49401, USA, and bCenter for Crystallographic Research, Department of Chemistry, Michigan State University, East Lansing, MI 48824, USA
*Correspondence e-mail: biross@gvsu.edu
The syntheses and characterization (NMR and XRD) of two substituted [2.2.2]bicyclooctene ring systems are described here. The cyclohexene rings of these systems adopt a nearly perfect boat conformation according to analysis using Cremer–Pople parameters. Both structures contain a nearly planar imide ring that is oriented endo relative to a bridgehead cyclopropyl ring. 4-(2-Phenylethyl)-4-azatetracyclo[5.3.2.02,6.08,10]dodec-11-ene-3,5-dione, C19H19NO2, is substituted with a phenylethyl group that hosts C—H⋯π interactions in the crystal. 4-[2-(4-Hydroxyphenyl)ethyl]-4-azatetracyclo[5.3.2.02,6.08,10]dodec-11-ene-3,5-dione, C19H19NO3, bears a 4-hydroxyphenylethyl group on the imide ring and contains O—H⋯O and C—H⋯O hydrogen bonds.
Keywords: crystal structure; imide; tricylic compound; C—H⋯O hydrogen bond; C—H⋯π interaction.
1. Chemical context
Diels–Alder adduct a was first reported in 1939 (Fig. 1; Kohler et al., 1939), however its structure was not unambiguously determined until nearly 15 years later (Alder & Jacobs, 1953). In 2020, Winchester and co-workers reported the of a in this journal (Hulsman et al., 2020). Anhydride a can be easily modified to give the corresponding b by heating with a primary amine. Previous work has shown that this rigid, tricyclic structure can serve as a scaffold for the design of new compounds with antiviral activity. One interesting imide derivative is compound c, Tecovirimat (Bailey et al., 2007; Hughes 2019), which has been approved as a treatment for smallpox.
Our interest in this chemistry is the use of this series of reactions in an upper-level undergraduate advanced organic chemistry laboratory course (Kurtz & Johnson, 1989). The tricyclic Diels–Alder adduct a is pedagogically useful for in-depth analysis by NMR spectroscopy, and the b are easily prepared and have turned out to be crystalline. In this context, we report here the syntheses, NMR characterizations and crystal structures of two of these I, C19H19NO2, and II, C19H19NO3.
2. Structural commentary
The molecular structure of compound I is shown in Fig. 2 along with its atom-labeling scheme. The imide ring (–N1–C1–C3–C4–C2–) is nearly planar with a Cremer–Pople τ value of 1.8 (Cremer & Pople, 1975) and is oriented endo relative to the bridgehead cyclopropyl ring (–C9—C10—C11–). The carbonyl groups of the imide rings have bond lengths of 1.216 (2) and 1.214 (2) Å, with C—N bond lengths of 1.383 (2) and 1.390 (2) Å in the ring. The phenylethyl substituent on the imide nitrogen N1 is oriented in a nearly perfect anti conformation around the C12—C13 bond with an N1—C12—C13—C14 torsion angle of −177.61 (13)°. The N1—C12 bond is slightly longer than the N—C(O) bond at 1.458 (2) Å. The cyclopropane ring has C—C bond lengths ranging from 1.507 (3) to 1.515 (2) Å with C—C—C bond angles ranging from 59.71 (12) to 60.29 (12)°. The cyclohexene ring system (-C3–C8–C7–C6–C5–C4-) has Cremer–Pople puckering parameters of 90.46 (13) and 299.31 (13)° for θ and φ, respectively, indicating that this ring is in a nearly perfect boat conformation. The alkene group (C6=C7) of this cyclohexene ring has a bond length of 1.329 (2) Å.
The molecular structure of compound II (Fig. 3) is, unsurprisingly, very similar to that of compound I. The imide ring (–N1–C1–C3–C4–C2–) again is planar and oriented endo relative to the cyclopropyl bridgehead carbon atoms C9 and C10. The key bond lengths and angles of this compound are nearly identical (within error) to those described above for compound I. The 2-ethyl-(4-hydroxyphenyl) substituent bonded to the imide nitrogen atom N1 again adopts an anti conformation around the ethyl C12—C13 bond with an N1—C12—C13—C14 torsion angle of −176.50 (10)°. The hydrogen atom of the phenol group (H3) is nearly coplanar with the atoms of the aromatic ring C14–C19 with a H3—O3—C17–C18 torsion angle of −1.4 (15)°.
3. Supramolecular features
The predominant intermolecular forces present in the crystal of compound I are C—H⋯π interactions between C11(H11A) and C12(H12B) and the centroid (Cg) of aromatic ring C14–C19 (Fig. 4, Table 1). Molecules of compound I are arranged into supramolecular sheets that lie in the ab plane.
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The crystal of compound II contains classical O—H⋯O and non-classical C—H⋯O hydrogen bonds (Sutor, 1962, 1963; Steiner, 1996) with the carbonyl oxygen atoms O1 and O2 as acceptors (Table 2). The classical O—H⋯O hydrogen bond has expectedly shorter H—A and D⋯A distances than the C—H⋯O hydrogen bonds. The hydrogen bonds between atoms H3 and O1 form centrosymmetric dimers in the crystal of compound II. These dimers are linked into columns via the H13A⋯O2 interactions that run along the a-axis direction (Fig. 5). These columns are then connected into a complex tri-periodic network via C—H⋯O interactions between H6 and O1.
4. Database survey
A search of the Cambridge Structural Database (CSD, version 5.45, updates through June 2024, Groom et al., 2016) for structures containing the tricyclic ring system shared by compounds I and II and substituted with carbonyl groups at the appropriate positions returned 16 hits. These hits include anhydride a (HOKRIK and HOKRIK01; White & Goh, 2014; Hulsman et al., 2020) along with two b where the substituents are a p-bromophenyl ring (NUTTEE; Hulsman et al., 2020) and an isoxazolidine ring (LULVUM; Efremova et al., 2020). Also found in this of crystal structures is tecovirimat c (UPUDOZ; Zhou et al., 2010) along with a derivative of c where the –CF3 group has been replaced with a –Br atom (SOKVIY; Bailey et al., 2007). An interesting hit is VONCEG (Menzek et al., 1991), which bears a substituted cycloheptatriene ring fused to the tricyclic core of anhydride a.
5. Synthesis and crystallization
Synthesis of I and II: Diels–Alder anhydride adduct a (50 mg, 0.26 mmol) was dissolved in 0.5 ml of xylenes in a small vial at ambient temperature. In a separate small vial at ambient temperature, an equimolar amount of either phenethylamine (for I) or tyramine (for II) was dissolved in 0.5 ml of xylenes and then transferred dropwise to the solution of the anhydride. The reaction mixture was heated to reflux with stirring for 30 minutes and then allowed to cool to room temperature. The stir bar was removed, and the reaction mixture was diluted with slow addition of 5 ml of hexanes. The product imide crystallized out of solution upon standing overnight.
I: 1H-NMR (400 MHz, chloroform-d) δ 7.26 (m, 2H), 7.19 (m, 3H), 5.59 (m, 2H), 3.62 (m, 2H), 3.33 (m, 2H), 2.90 (m, 2H), 2.76 (t, J = 8.0 Hz, 2H), 1.05 (m, 2H), 0.24 (m, 1H), 0.19 (m, 1H); 13C-NMR (100 MHz, chloroform-d) δ 178.5, 137.9, 129.0, 128.5, 127.6, 126.6, 45.3, 39.5, 33.6, 33.5, 9.9, 4.8.
II: 1H-NMR (400 MHz, DMSO-d6) δ 9.19 (s, 1H, –OH), 6.88 (d, J = 8.4 Hz, 2H), 6.60 (d, J = 8.4 Hz, 2H), 5.55 (m, 2H), 3.37 (m, 2H), 3.13 (m, 2H), 2.94 (m, 2H), 2.49 (m, 2H), 1.06 (m, 2H), 0.17 (m, 1H), −0.02 (m, 1H); 13C-NMR (100 MHz, DMSO-d6) δ 178.5, 156.3, 130.1, 128.5, 127.8, 115.6, 45.1, 40.6, 33.4, 32.6, 10.0, 4.9.
6. Refinement
Crystal data, data collection and structure . All hydrogen atoms bonded to carbon atoms were placed in calculated positions and refined as riding: C—H = 0.95–1.00 Å with Uiso(H) = 1.2Ueq(C) for methylene, methine, aromatic and alkene groups. In the structure of compound II, hydrogen atom H3 (which is part of the hydroxy group) was located using electron-density difference maps and refined freely.
details are summarized in Table 3Supporting information
https://doi.org/10.1107/S2056989024011253/wm5740sup1.cif
contains datablocks I, II. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S2056989024011253/wm5740Isup2.hkl
Structure factors: contains datablock II. DOI: https://doi.org/10.1107/S2056989024011253/wm5740IIsup3.hkl
Supporting information file. DOI: https://doi.org/10.1107/S2056989024011253/wm5740Isup4.cml
Supporting information file. DOI: https://doi.org/10.1107/S2056989024011253/wm5740IIsup5.cml
C19H19NO2 | F(000) = 624 |
Mr = 293.35 | Dx = 1.311 Mg m−3 |
Monoclinic, P21/n | Cu Kα radiation, λ = 1.54184 Å |
a = 6.1340 (2) Å | Cell parameters from 5833 reflections |
b = 21.2794 (8) Å | θ = 4.1–76.8° |
c = 11.4373 (3) Å | µ = 0.67 mm−1 |
β = 95.625 (3)° | T = 100 K |
V = 1485.70 (8) Å3 | Irregular, colourless |
Z = 4 | 0.28 × 0.07 × 0.03 mm |
XtaLAB Synergy, Dualflex, HyPix diffractometer | 3094 independent reflections |
Radiation source: micro-focus sealed X-ray tube, PhotonJet (Cu) X-ray Source | 2481 reflections with I > 2σ(I) |
Mirror monochromator | Rint = 0.068 |
Detector resolution: 10.0000 pixels mm-1 | θmax = 77.2°, θmin = 4.2° |
ω scans | h = −7→7 |
Absorption correction: gaussian (CrysAlisPro; Rigaku OD, 2023) | k = −26→26 |
Tmin = 0.816, Tmax = 1.000 | l = −14→13 |
11251 measured reflections |
Refinement on F2 | Primary atom site location: dual |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.052 | H-atom parameters constrained |
wR(F2) = 0.149 | w = 1/[σ2(Fo2) + (0.0696P)2 + 0.6093P] where P = (Fo2 + 2Fc2)/3 |
S = 1.05 | (Δ/σ)max < 0.001 |
3094 reflections | Δρmax = 0.28 e Å−3 |
199 parameters | Δρmin = −0.32 e Å−3 |
0 restraints |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
x | y | z | Uiso*/Ueq | ||
O1 | 0.1032 (2) | 0.67788 (7) | 0.42612 (11) | 0.0319 (3) | |
O2 | 0.7405 (2) | 0.66698 (6) | 0.66530 (11) | 0.0330 (3) | |
N1 | 0.4237 (2) | 0.65809 (7) | 0.54138 (12) | 0.0245 (3) | |
C1 | 0.2421 (3) | 0.69384 (8) | 0.50360 (14) | 0.0241 (4) | |
C2 | 0.5649 (3) | 0.68831 (8) | 0.62579 (15) | 0.0256 (4) | |
C3 | 0.2536 (3) | 0.75512 (8) | 0.56981 (14) | 0.0236 (4) | |
H3 | 0.123802 | 0.759793 | 0.615613 | 0.028* | |
C4 | 0.4672 (3) | 0.75100 (8) | 0.65382 (14) | 0.0231 (4) | |
H4 | 0.433452 | 0.752250 | 0.737575 | 0.028* | |
C5 | 0.6221 (3) | 0.80617 (8) | 0.62777 (15) | 0.0246 (4) | |
H5 | 0.763479 | 0.804214 | 0.679197 | 0.030* | |
C6 | 0.6582 (3) | 0.80049 (9) | 0.49988 (15) | 0.0261 (4) | |
H6 | 0.799403 | 0.795115 | 0.473882 | 0.031* | |
C7 | 0.4770 (3) | 0.80360 (8) | 0.42621 (15) | 0.0243 (4) | |
H7 | 0.478006 | 0.800593 | 0.343395 | 0.029* | |
C8 | 0.2696 (3) | 0.81229 (8) | 0.48505 (15) | 0.0236 (4) | |
H8 | 0.138189 | 0.815029 | 0.426211 | 0.028* | |
C9 | 0.2871 (3) | 0.86951 (8) | 0.56640 (15) | 0.0273 (4) | |
H9 | 0.150156 | 0.882946 | 0.600205 | 0.033* | |
C10 | 0.4937 (3) | 0.86586 (8) | 0.65038 (15) | 0.0269 (4) | |
H10 | 0.480218 | 0.877117 | 0.734259 | 0.032* | |
C11 | 0.4636 (3) | 0.91838 (9) | 0.56136 (16) | 0.0306 (4) | |
H11A | 0.434327 | 0.961057 | 0.590545 | 0.037* | |
H11B | 0.552811 | 0.917114 | 0.493804 | 0.037* | |
C12 | 0.4735 (3) | 0.59815 (8) | 0.48821 (15) | 0.0266 (4) | |
H12A | 0.335405 | 0.575070 | 0.466226 | 0.032* | |
H12B | 0.564550 | 0.572440 | 0.546295 | 0.032* | |
C13 | 0.5946 (3) | 0.60743 (9) | 0.37955 (16) | 0.0281 (4) | |
H13A | 0.506493 | 0.634553 | 0.322642 | 0.034* | |
H13B | 0.735919 | 0.628814 | 0.401942 | 0.034* | |
C14 | 0.6365 (3) | 0.54518 (8) | 0.32266 (14) | 0.0243 (4) | |
C15 | 0.8332 (3) | 0.51322 (9) | 0.34909 (16) | 0.0307 (4) | |
H15 | 0.945359 | 0.531513 | 0.401466 | 0.037* | |
C16 | 0.8672 (3) | 0.45473 (10) | 0.29953 (19) | 0.0388 (5) | |
H16 | 1.001862 | 0.433229 | 0.318270 | 0.047* | |
C17 | 0.7048 (4) | 0.42793 (10) | 0.22293 (19) | 0.0410 (5) | |
H17 | 0.727929 | 0.387999 | 0.189122 | 0.049* | |
C18 | 0.5090 (4) | 0.45915 (10) | 0.19556 (17) | 0.0381 (5) | |
H18 | 0.397671 | 0.440800 | 0.142784 | 0.046* | |
C19 | 0.4755 (3) | 0.51726 (9) | 0.24523 (16) | 0.0305 (4) | |
H19 | 0.340323 | 0.538453 | 0.226201 | 0.037* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.0239 (6) | 0.0413 (8) | 0.0283 (7) | −0.0053 (5) | −0.0082 (5) | −0.0036 (5) |
O2 | 0.0311 (7) | 0.0350 (7) | 0.0298 (7) | 0.0080 (5) | −0.0131 (5) | −0.0025 (5) |
N1 | 0.0244 (7) | 0.0273 (8) | 0.0207 (7) | 0.0002 (5) | −0.0035 (5) | −0.0007 (5) |
C1 | 0.0200 (7) | 0.0305 (9) | 0.0212 (8) | −0.0020 (6) | −0.0005 (6) | 0.0025 (6) |
C2 | 0.0266 (8) | 0.0297 (9) | 0.0189 (7) | 0.0011 (6) | −0.0061 (6) | −0.0003 (6) |
C3 | 0.0183 (7) | 0.0309 (9) | 0.0208 (7) | 0.0002 (6) | −0.0029 (6) | 0.0008 (6) |
C4 | 0.0222 (8) | 0.0279 (9) | 0.0180 (7) | 0.0015 (6) | −0.0043 (6) | 0.0000 (6) |
C5 | 0.0193 (7) | 0.0299 (9) | 0.0227 (8) | −0.0011 (6) | −0.0078 (6) | −0.0010 (6) |
C6 | 0.0201 (8) | 0.0313 (9) | 0.0266 (8) | −0.0003 (6) | 0.0002 (6) | −0.0007 (7) |
C7 | 0.0238 (8) | 0.0294 (9) | 0.0194 (7) | −0.0011 (6) | −0.0002 (6) | 0.0010 (6) |
C8 | 0.0177 (7) | 0.0295 (9) | 0.0223 (8) | 0.0012 (6) | −0.0043 (6) | 0.0018 (6) |
C9 | 0.0255 (8) | 0.0305 (9) | 0.0251 (8) | 0.0042 (7) | −0.0021 (7) | 0.0009 (7) |
C10 | 0.0276 (8) | 0.0291 (9) | 0.0226 (8) | 0.0004 (7) | −0.0046 (7) | −0.0021 (6) |
C11 | 0.0347 (9) | 0.0272 (9) | 0.0284 (9) | 0.0006 (7) | −0.0040 (7) | 0.0001 (7) |
C12 | 0.0294 (8) | 0.0267 (8) | 0.0226 (8) | −0.0009 (7) | −0.0029 (7) | −0.0011 (6) |
C13 | 0.0298 (8) | 0.0282 (9) | 0.0261 (8) | −0.0021 (7) | 0.0008 (7) | −0.0004 (7) |
C14 | 0.0243 (8) | 0.0278 (9) | 0.0206 (7) | −0.0008 (6) | 0.0005 (6) | 0.0021 (6) |
C15 | 0.0242 (8) | 0.0378 (10) | 0.0296 (9) | 0.0004 (7) | −0.0009 (7) | 0.0070 (7) |
C16 | 0.0360 (10) | 0.0377 (11) | 0.0448 (11) | 0.0111 (8) | 0.0145 (8) | 0.0110 (9) |
C17 | 0.0576 (13) | 0.0301 (10) | 0.0381 (10) | −0.0008 (9) | 0.0196 (9) | −0.0033 (8) |
C18 | 0.0474 (11) | 0.0378 (11) | 0.0284 (9) | −0.0086 (9) | −0.0001 (8) | −0.0063 (8) |
C19 | 0.0286 (9) | 0.0348 (10) | 0.0266 (8) | −0.0008 (7) | −0.0043 (7) | 0.0007 (7) |
O1—C1 | 1.216 (2) | C9—C11 | 1.507 (3) |
O2—C2 | 1.214 (2) | C10—H10 | 1.0000 |
N1—C1 | 1.383 (2) | C10—C11 | 1.511 (2) |
N1—C2 | 1.390 (2) | C11—H11A | 0.9900 |
N1—C12 | 1.458 (2) | C11—H11B | 0.9900 |
C1—C3 | 1.506 (2) | C12—H12A | 0.9900 |
C2—C4 | 1.510 (2) | C12—H12B | 0.9900 |
C3—H3 | 1.0000 | C12—C13 | 1.522 (3) |
C3—C4 | 1.550 (2) | C13—H13A | 0.9900 |
C3—C8 | 1.565 (2) | C13—H13B | 0.9900 |
C4—H4 | 1.0000 | C13—C14 | 1.509 (3) |
C4—C5 | 1.557 (2) | C14—C15 | 1.392 (2) |
C5—H5 | 1.0000 | C14—C19 | 1.393 (2) |
C5—C6 | 1.506 (2) | C15—H15 | 0.9500 |
C5—C10 | 1.530 (2) | C15—C16 | 1.392 (3) |
C6—H6 | 0.9500 | C16—H16 | 0.9500 |
C6—C7 | 1.329 (2) | C16—C17 | 1.384 (3) |
C7—H7 | 0.9500 | C17—H17 | 0.9500 |
C7—C8 | 1.507 (2) | C17—C18 | 1.381 (3) |
C8—H8 | 1.0000 | C18—H18 | 0.9500 |
C8—C9 | 1.530 (2) | C18—C19 | 1.385 (3) |
C9—H9 | 1.0000 | C19—H19 | 0.9500 |
C9—C10 | 1.515 (2) | ||
C1—N1—C2 | 113.00 (15) | C11—C9—C10 | 60.00 (11) |
C1—N1—C12 | 123.10 (14) | C5—C10—H10 | 117.0 |
C2—N1—C12 | 123.54 (14) | C9—C10—C5 | 110.36 (14) |
O1—C1—N1 | 124.01 (17) | C9—C10—H10 | 117.0 |
O1—C1—C3 | 127.11 (16) | C11—C10—C5 | 122.08 (15) |
N1—C1—C3 | 108.82 (13) | C11—C10—C9 | 59.71 (11) |
O2—C2—N1 | 123.73 (16) | C11—C10—H10 | 117.0 |
O2—C2—C4 | 127.40 (15) | C9—C11—C10 | 60.29 (12) |
N1—C2—C4 | 108.83 (14) | C9—C11—H11A | 117.7 |
C1—C3—H3 | 110.4 | C9—C11—H11B | 117.7 |
C1—C3—C4 | 104.95 (13) | C10—C11—H11A | 117.7 |
C1—C3—C8 | 111.37 (14) | C10—C11—H11B | 117.7 |
C4—C3—H3 | 110.4 | H11A—C11—H11B | 114.9 |
C4—C3—C8 | 109.12 (13) | N1—C12—H12A | 109.3 |
C8—C3—H3 | 110.4 | N1—C12—H12B | 109.3 |
C2—C4—C3 | 104.33 (13) | N1—C12—C13 | 111.47 (15) |
C2—C4—H4 | 110.5 | H12A—C12—H12B | 108.0 |
C2—C4—C5 | 111.29 (14) | C13—C12—H12A | 109.3 |
C3—C4—H4 | 110.5 | C13—C12—H12B | 109.3 |
C3—C4—C5 | 109.47 (13) | C12—C13—H13A | 109.5 |
C5—C4—H4 | 110.5 | C12—C13—H13B | 109.5 |
C4—C5—H5 | 111.5 | H13A—C13—H13B | 108.1 |
C6—C5—C4 | 106.02 (13) | C14—C13—C12 | 110.83 (15) |
C6—C5—H5 | 111.5 | C14—C13—H13A | 109.5 |
C6—C5—C10 | 110.98 (14) | C14—C13—H13B | 109.5 |
C10—C5—C4 | 105.06 (14) | C15—C14—C13 | 121.05 (16) |
C10—C5—H5 | 111.5 | C15—C14—C19 | 118.36 (17) |
C5—C6—H6 | 122.6 | C19—C14—C13 | 120.55 (16) |
C7—C6—C5 | 114.74 (15) | C14—C15—H15 | 119.7 |
C7—C6—H6 | 122.6 | C16—C15—C14 | 120.64 (17) |
C6—C7—H7 | 122.8 | C16—C15—H15 | 119.7 |
C6—C7—C8 | 114.39 (15) | C15—C16—H16 | 120.0 |
C8—C7—H7 | 122.8 | C17—C16—C15 | 119.94 (18) |
C3—C8—H8 | 111.5 | C17—C16—H16 | 120.0 |
C7—C8—C3 | 106.75 (13) | C16—C17—H17 | 120.0 |
C7—C8—H8 | 111.5 | C18—C17—C16 | 120.10 (19) |
C7—C8—C9 | 110.95 (14) | C18—C17—H17 | 120.0 |
C9—C8—C3 | 104.29 (14) | C17—C18—H18 | 120.1 |
C9—C8—H8 | 111.5 | C17—C18—C19 | 119.83 (18) |
C8—C9—H9 | 116.8 | C19—C18—H18 | 120.1 |
C10—C9—C8 | 110.42 (14) | C14—C19—H19 | 119.4 |
C10—C9—H9 | 116.8 | C18—C19—C14 | 121.12 (17) |
C11—C9—C8 | 122.26 (16) | C18—C19—H19 | 119.4 |
C11—C9—H9 | 116.8 | ||
O1—C1—C3—C4 | −177.86 (17) | C5—C6—C7—C8 | 0.1 (2) |
O1—C1—C3—C8 | −59.9 (2) | C5—C10—C11—C9 | 96.28 (17) |
O2—C2—C4—C3 | 174.98 (18) | C6—C5—C10—C9 | 51.69 (19) |
O2—C2—C4—C5 | 57.0 (2) | C6—C5—C10—C11 | −14.6 (2) |
N1—C1—C3—C4 | −0.50 (18) | C6—C7—C8—C3 | −58.86 (19) |
N1—C1—C3—C8 | 117.44 (15) | C6—C7—C8—C9 | 54.2 (2) |
N1—C2—C4—C3 | −2.65 (18) | C7—C8—C9—C10 | −52.07 (19) |
N1—C2—C4—C5 | −120.61 (15) | C7—C8—C9—C11 | 14.6 (2) |
N1—C12—C13—C14 | −177.61 (13) | C8—C3—C4—C2 | −117.59 (15) |
C1—N1—C2—O2 | −175.20 (17) | C8—C3—C4—C5 | 1.61 (18) |
C1—N1—C2—C4 | 2.5 (2) | C8—C9—C10—C5 | 0.2 (2) |
C1—N1—C12—C13 | 83.9 (2) | C8—C9—C10—C11 | 116.27 (17) |
C1—C3—C4—C2 | 1.86 (17) | C8—C9—C11—C10 | −96.44 (17) |
C1—C3—C4—C5 | 121.06 (15) | C10—C5—C6—C7 | −54.2 (2) |
C1—C3—C8—C7 | −60.75 (16) | C11—C9—C10—C5 | −116.06 (17) |
C1—C3—C8—C9 | −178.27 (13) | C12—N1—C1—O1 | 2.8 (3) |
C2—N1—C1—O1 | 176.20 (17) | C12—N1—C1—C3 | −174.62 (15) |
C2—N1—C1—C3 | −1.3 (2) | C12—N1—C2—O2 | −1.9 (3) |
C2—N1—C12—C13 | −88.81 (19) | C12—N1—C2—C4 | 175.86 (15) |
C2—C4—C5—C6 | 57.84 (17) | C12—C13—C14—C15 | −94.16 (19) |
C2—C4—C5—C10 | 175.42 (13) | C12—C13—C14—C19 | 83.6 (2) |
C3—C4—C5—C6 | −56.97 (17) | C13—C14—C15—C16 | 177.59 (17) |
C3—C4—C5—C10 | 60.61 (16) | C13—C14—C19—C18 | −177.77 (18) |
C3—C8—C9—C10 | 62.51 (17) | C14—C15—C16—C17 | 0.2 (3) |
C3—C8—C9—C11 | 129.18 (16) | C15—C14—C19—C18 | 0.1 (3) |
C4—C3—C8—C7 | 54.64 (17) | C15—C16—C17—C18 | 0.0 (3) |
C4—C3—C8—C9 | −62.88 (16) | C16—C17—C18—C19 | −0.2 (3) |
C4—C5—C6—C7 | 59.37 (19) | C17—C18—C19—C14 | 0.1 (3) |
C4—C5—C10—C9 | −62.47 (17) | C19—C14—C15—C16 | −0.2 (3) |
C4—C5—C10—C11 | −128.74 (16) |
Cg denotes the centroid of the C14-C19 ring. |
D—H···A | D—H | H···A | D···A | D—H···A |
C11i—H11A···Cg | 0.99 | 2.98 | 3.744 (2) | 135 |
C12ii—H12B···Cg | 0.99 | 2.92 | 3.4608 (19) | 115 |
Symmetry codes: (i) x−3/2, −y+1/2, z−1/2; (ii) −x+1, −y+1, −z+1. |
C19H19NO3 | F(000) = 656 |
Mr = 309.35 | Dx = 1.342 Mg m−3 |
Monoclinic, P21/n | Cu Kα radiation, λ = 1.54184 Å |
a = 6.19482 (10) Å | Cell parameters from 11000 reflections |
b = 20.3854 (3) Å | θ = 4.2–77.3° |
c = 12.4574 (2) Å | µ = 0.73 mm−1 |
β = 103.3334 (16)° | T = 100 K |
V = 1530.76 (4) Å3 | Needle, colourless |
Z = 4 | 0.25 × 0.05 × 0.03 mm |
XtaLAB Synergy, Dualflex, HyPix diffractometer | 3219 independent reflections |
Radiation source: micro-focus sealed X-ray tube, PhotonJet (Cu) X-ray Source | 2738 reflections with I > 2σ(I) |
Mirror monochromator | Rint = 0.053 |
Detector resolution: 10.0000 pixels mm-1 | θmax = 77.7°, θmin = 4.2° |
ω scans | h = −7→7 |
Absorption correction: gaussian (CrysAlisPro; Rigaku OD, 2023) | k = −25→22 |
Tmin = 0.831, Tmax = 1.000 | l = −15→15 |
24225 measured reflections |
Refinement on F2 | Primary atom site location: dual |
Least-squares matrix: full | Hydrogen site location: mixed |
R[F2 > 2σ(F2)] = 0.037 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.099 | w = 1/[σ2(Fo2) + (0.0479P)2 + 0.4204P] where P = (Fo2 + 2Fc2)/3 |
S = 1.03 | (Δ/σ)max = 0.001 |
3219 reflections | Δρmax = 0.24 e Å−3 |
212 parameters | Δρmin = −0.19 e Å−3 |
0 restraints |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
x | y | z | Uiso*/Ueq | ||
O1 | 0.22461 (14) | 0.32415 (4) | 0.34473 (7) | 0.0282 (2) | |
O2 | 0.92166 (14) | 0.32894 (5) | 0.56437 (8) | 0.0312 (2) | |
O3 | 0.22408 (16) | 0.63973 (4) | 0.76502 (7) | 0.0283 (2) | |
N1 | 0.56517 (16) | 0.33992 (5) | 0.46177 (8) | 0.0233 (2) | |
C1 | 0.4153 (2) | 0.30627 (6) | 0.38185 (9) | 0.0226 (2) | |
C2 | 0.7694 (2) | 0.30848 (6) | 0.49296 (10) | 0.0235 (3) | |
C3 | 0.52553 (19) | 0.24518 (6) | 0.35103 (9) | 0.0220 (2) | |
H3A | 0.532143 | 0.246899 | 0.271628 | 0.026* | |
C4 | 0.76183 (19) | 0.24663 (6) | 0.42573 (10) | 0.0218 (2) | |
H4 | 0.874553 | 0.248648 | 0.379854 | 0.026* | |
C5 | 0.79950 (19) | 0.18446 (6) | 0.50036 (10) | 0.0226 (3) | |
H5 | 0.948741 | 0.184960 | 0.552529 | 0.027* | |
C6 | 0.6156 (2) | 0.18277 (6) | 0.56081 (10) | 0.0238 (3) | |
H6 | 0.642429 | 0.183069 | 0.639031 | 0.029* | |
C7 | 0.4127 (2) | 0.18083 (6) | 0.49618 (10) | 0.0253 (3) | |
H7 | 0.282883 | 0.179131 | 0.524435 | 0.030* | |
C8 | 0.4050 (2) | 0.18152 (6) | 0.37461 (10) | 0.0244 (3) | |
H8 | 0.249038 | 0.179731 | 0.329527 | 0.029* | |
C9 | 0.5462 (2) | 0.12572 (6) | 0.34451 (10) | 0.0261 (3) | |
H9 | 0.534891 | 0.117643 | 0.264226 | 0.031* | |
C10 | 0.7766 (2) | 0.12710 (6) | 0.41887 (10) | 0.0252 (3) | |
H10 | 0.903112 | 0.119695 | 0.382893 | 0.030* | |
C11 | 0.6262 (2) | 0.06955 (6) | 0.42227 (11) | 0.0303 (3) | |
H11A | 0.562029 | 0.064960 | 0.487680 | 0.036* | |
H11B | 0.661504 | 0.027621 | 0.390032 | 0.036* | |
C12 | 0.5151 (2) | 0.40098 (6) | 0.51242 (10) | 0.0246 (3) | |
H12A | 0.390600 | 0.423331 | 0.461438 | 0.030* | |
H12B | 0.646043 | 0.430232 | 0.523776 | 0.030* | |
C13 | 0.4537 (2) | 0.38991 (6) | 0.62283 (10) | 0.0246 (3) | |
H13A | 0.327791 | 0.358846 | 0.612991 | 0.030* | |
H13B | 0.581309 | 0.370480 | 0.676067 | 0.030* | |
C14 | 0.39024 (19) | 0.45416 (6) | 0.66741 (9) | 0.0218 (2) | |
C15 | 0.5441 (2) | 0.49292 (6) | 0.73957 (10) | 0.0252 (3) | |
H15 | 0.690945 | 0.477136 | 0.766275 | 0.030* | |
C16 | 0.4865 (2) | 0.55417 (6) | 0.77310 (10) | 0.0257 (3) | |
H16 | 0.593183 | 0.579772 | 0.822688 | 0.031* | |
C17 | 0.2723 (2) | 0.57793 (6) | 0.73392 (9) | 0.0231 (3) | |
C18 | 0.11533 (19) | 0.53920 (6) | 0.66448 (10) | 0.0242 (3) | |
H18 | −0.032540 | 0.554538 | 0.639392 | 0.029* | |
C19 | 0.17502 (19) | 0.47814 (6) | 0.63190 (10) | 0.0235 (3) | |
H19 | 0.066654 | 0.452024 | 0.584257 | 0.028* | |
H3 | 0.077 (4) | 0.6475 (12) | 0.7333 (18) | 0.068 (6)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.0251 (4) | 0.0331 (5) | 0.0243 (4) | 0.0062 (4) | 0.0013 (3) | 0.0008 (3) |
O2 | 0.0250 (5) | 0.0298 (5) | 0.0357 (5) | −0.0029 (4) | 0.0006 (4) | −0.0067 (4) |
O3 | 0.0302 (5) | 0.0249 (5) | 0.0298 (5) | 0.0027 (4) | 0.0071 (4) | −0.0037 (3) |
N1 | 0.0247 (5) | 0.0229 (5) | 0.0217 (5) | 0.0018 (4) | 0.0041 (4) | −0.0009 (4) |
C1 | 0.0242 (6) | 0.0260 (6) | 0.0175 (5) | 0.0013 (5) | 0.0045 (4) | 0.0021 (4) |
C2 | 0.0223 (6) | 0.0239 (6) | 0.0244 (6) | −0.0012 (4) | 0.0058 (4) | 0.0003 (5) |
C3 | 0.0224 (6) | 0.0249 (6) | 0.0183 (5) | 0.0011 (4) | 0.0036 (4) | −0.0015 (4) |
C4 | 0.0198 (5) | 0.0243 (6) | 0.0221 (6) | −0.0004 (4) | 0.0062 (4) | −0.0008 (4) |
C5 | 0.0196 (5) | 0.0247 (6) | 0.0229 (6) | 0.0009 (4) | 0.0037 (4) | −0.0001 (4) |
C6 | 0.0255 (6) | 0.0250 (6) | 0.0213 (6) | 0.0004 (5) | 0.0062 (5) | 0.0010 (4) |
C7 | 0.0226 (6) | 0.0268 (6) | 0.0280 (6) | −0.0005 (5) | 0.0091 (5) | −0.0004 (5) |
C8 | 0.0202 (6) | 0.0271 (6) | 0.0244 (6) | −0.0016 (5) | 0.0020 (4) | −0.0030 (5) |
C9 | 0.0266 (6) | 0.0258 (6) | 0.0248 (6) | −0.0012 (5) | 0.0039 (5) | −0.0044 (5) |
C10 | 0.0242 (6) | 0.0242 (6) | 0.0276 (6) | 0.0010 (5) | 0.0068 (5) | −0.0013 (5) |
C11 | 0.0333 (7) | 0.0236 (6) | 0.0330 (7) | −0.0012 (5) | 0.0059 (5) | −0.0020 (5) |
C12 | 0.0294 (6) | 0.0207 (6) | 0.0237 (6) | 0.0040 (5) | 0.0060 (5) | −0.0003 (4) |
C13 | 0.0272 (6) | 0.0226 (6) | 0.0237 (6) | 0.0018 (5) | 0.0054 (5) | 0.0016 (5) |
C14 | 0.0242 (6) | 0.0224 (6) | 0.0194 (5) | 0.0009 (4) | 0.0059 (4) | 0.0023 (4) |
C15 | 0.0215 (6) | 0.0279 (6) | 0.0248 (6) | 0.0013 (5) | 0.0027 (4) | 0.0007 (5) |
C16 | 0.0241 (6) | 0.0269 (6) | 0.0242 (6) | −0.0028 (5) | 0.0017 (4) | −0.0025 (5) |
C17 | 0.0272 (6) | 0.0221 (6) | 0.0213 (5) | 0.0004 (5) | 0.0080 (5) | 0.0001 (4) |
C18 | 0.0211 (5) | 0.0264 (6) | 0.0244 (6) | 0.0012 (5) | 0.0041 (4) | 0.0016 (5) |
C19 | 0.0233 (6) | 0.0248 (6) | 0.0216 (5) | −0.0018 (4) | 0.0033 (4) | 0.0001 (4) |
O1—C1 | 1.2208 (15) | C9—H9 | 1.0000 |
O2—C2 | 1.2115 (15) | C9—C10 | 1.5119 (17) |
O3—C17 | 1.3713 (15) | C9—C11 | 1.5079 (18) |
O3—H3 | 0.92 (2) | C10—H10 | 1.0000 |
N1—C1 | 1.3774 (15) | C10—C11 | 1.5047 (18) |
N1—C2 | 1.3916 (15) | C11—H11A | 0.9900 |
N1—C12 | 1.4607 (15) | C11—H11B | 0.9900 |
C1—C3 | 1.5118 (16) | C12—H12A | 0.9900 |
C2—C4 | 1.5083 (16) | C12—H12B | 0.9900 |
C3—H3A | 1.0000 | C12—C13 | 1.5263 (17) |
C3—C4 | 1.5432 (16) | C13—H13A | 0.9900 |
C3—C8 | 1.5585 (17) | C13—H13B | 0.9900 |
C4—H4 | 1.0000 | C13—C14 | 1.5096 (16) |
C4—C5 | 1.5572 (16) | C14—C15 | 1.3947 (17) |
C5—H5 | 1.0000 | C14—C19 | 1.3929 (17) |
C5—C6 | 1.5041 (16) | C15—H15 | 0.9500 |
C5—C10 | 1.5336 (17) | C15—C16 | 1.3890 (17) |
C6—H6 | 0.9500 | C16—H16 | 0.9500 |
C6—C7 | 1.3275 (17) | C16—C17 | 1.3907 (17) |
C7—H7 | 0.9500 | C17—C18 | 1.3891 (17) |
C7—C8 | 1.5042 (17) | C18—H18 | 0.9500 |
C8—H8 | 1.0000 | C18—C19 | 1.3857 (17) |
C8—C9 | 1.5333 (17) | C19—H19 | 0.9500 |
C17—O3—H3 | 107.2 (15) | C11—C9—H9 | 117.0 |
C1—N1—C2 | 112.97 (10) | C11—C9—C10 | 59.77 (8) |
C1—N1—C12 | 124.18 (10) | C5—C10—H10 | 116.7 |
C2—N1—C12 | 122.81 (10) | C9—C10—C5 | 110.48 (10) |
O1—C1—N1 | 123.86 (11) | C9—C10—H10 | 116.7 |
O1—C1—C3 | 127.16 (11) | C11—C10—C5 | 122.63 (10) |
N1—C1—C3 | 108.98 (10) | C11—C10—C9 | 59.98 (8) |
O2—C2—N1 | 123.37 (11) | C11—C10—H10 | 116.7 |
O2—C2—C4 | 127.95 (11) | C9—C11—H11A | 117.7 |
N1—C2—C4 | 108.67 (10) | C9—C11—H11B | 117.7 |
C1—C3—H3A | 110.3 | C10—C11—C9 | 60.25 (8) |
C1—C3—C4 | 104.61 (9) | C10—C11—H11A | 117.7 |
C1—C3—C8 | 111.96 (10) | C10—C11—H11B | 117.7 |
C4—C3—H3A | 110.3 | H11A—C11—H11B | 114.9 |
C4—C3—C8 | 109.35 (9) | N1—C12—H12A | 109.1 |
C8—C3—H3A | 110.3 | N1—C12—H12B | 109.1 |
C2—C4—C3 | 104.76 (9) | N1—C12—C13 | 112.65 (10) |
C2—C4—H4 | 110.3 | H12A—C12—H12B | 107.8 |
C2—C4—C5 | 111.57 (10) | C13—C12—H12A | 109.1 |
C3—C4—H4 | 110.3 | C13—C12—H12B | 109.1 |
C3—C4—C5 | 109.58 (9) | C12—C13—H13A | 109.6 |
C5—C4—H4 | 110.3 | C12—C13—H13B | 109.6 |
C4—C5—H5 | 111.6 | H13A—C13—H13B | 108.2 |
C6—C5—C4 | 106.92 (9) | C14—C13—C12 | 110.09 (10) |
C6—C5—H5 | 111.6 | C14—C13—H13A | 109.6 |
C6—C5—C10 | 110.41 (10) | C14—C13—H13B | 109.6 |
C10—C5—C4 | 104.31 (9) | C15—C14—C13 | 122.11 (11) |
C10—C5—H5 | 111.6 | C19—C14—C13 | 119.93 (11) |
C5—C6—H6 | 122.7 | C19—C14—C15 | 117.88 (11) |
C7—C6—C5 | 114.68 (11) | C14—C15—H15 | 119.4 |
C7—C6—H6 | 122.7 | C16—C15—C14 | 121.23 (11) |
C6—C7—H7 | 122.7 | C16—C15—H15 | 119.4 |
C6—C7—C8 | 114.59 (11) | C15—C16—H16 | 120.1 |
C8—C7—H7 | 122.7 | C15—C16—C17 | 119.86 (11) |
C3—C8—H8 | 111.6 | C17—C16—H16 | 120.1 |
C7—C8—C3 | 106.99 (10) | O3—C17—C16 | 118.25 (11) |
C7—C8—H8 | 111.6 | O3—C17—C18 | 122.08 (11) |
C7—C8—C9 | 110.59 (10) | C18—C17—C16 | 119.66 (11) |
C9—C8—C3 | 104.27 (10) | C17—C18—H18 | 120.1 |
C9—C8—H8 | 111.6 | C19—C18—C17 | 119.81 (11) |
C8—C9—H9 | 117.0 | C19—C18—H18 | 120.1 |
C10—C9—C8 | 110.33 (10) | C14—C19—H19 | 119.2 |
C10—C9—H9 | 117.0 | C18—C19—C14 | 121.51 (11) |
C11—C9—C8 | 121.86 (11) | C18—C19—H19 | 119.2 |
O1—C1—C3—C4 | −178.30 (11) | C5—C6—C7—C8 | −0.72 (16) |
O1—C1—C3—C8 | −59.98 (15) | C5—C10—C11—C9 | 96.31 (12) |
O2—C2—C4—C3 | 178.33 (12) | C6—C5—C10—C9 | 52.63 (13) |
O2—C2—C4—C5 | 59.86 (16) | C6—C5—C10—C11 | −14.10 (16) |
O3—C17—C18—C19 | 177.36 (10) | C6—C7—C8—C3 | −58.08 (14) |
N1—C1—C3—C4 | 0.97 (12) | C6—C7—C8—C9 | 54.89 (14) |
N1—C1—C3—C8 | 119.29 (10) | C7—C8—C9—C10 | −51.60 (13) |
N1—C2—C4—C3 | −0.39 (12) | C7—C8—C9—C11 | 14.71 (16) |
N1—C2—C4—C5 | −118.87 (10) | C8—C3—C4—C2 | −120.42 (10) |
N1—C12—C13—C14 | −176.50 (10) | C8—C3—C4—C5 | −0.61 (12) |
C1—N1—C2—O2 | −177.71 (11) | C8—C9—C10—C5 | −0.86 (14) |
C1—N1—C2—C4 | 1.08 (13) | C8—C9—C10—C11 | 115.82 (12) |
C1—N1—C12—C13 | 97.13 (13) | C8—C9—C11—C10 | −96.40 (12) |
C1—C3—C4—C2 | −0.34 (12) | C10—C5—C6—C7 | −54.04 (14) |
C1—C3—C4—C5 | 119.47 (10) | C11—C9—C10—C5 | −116.68 (11) |
C1—C3—C8—C7 | −59.82 (12) | C12—N1—C1—O1 | 0.18 (18) |
C1—C3—C8—C9 | −177.03 (9) | C12—N1—C1—C3 | −179.12 (10) |
C2—N1—C1—O1 | 177.99 (11) | C12—N1—C2—O2 | 0.13 (19) |
C2—N1—C1—C3 | −1.31 (13) | C12—N1—C2—C4 | 178.92 (10) |
C2—N1—C12—C13 | −80.46 (14) | C12—C13—C14—C15 | −92.81 (13) |
C2—C4—C5—C6 | 60.69 (12) | C12—C13—C14—C19 | 83.66 (13) |
C2—C4—C5—C10 | 177.68 (9) | C13—C14—C15—C16 | 175.06 (11) |
C3—C4—C5—C6 | −54.85 (12) | C13—C14—C19—C18 | −175.00 (11) |
C3—C4—C5—C10 | 62.13 (11) | C14—C15—C16—C17 | −0.43 (18) |
C3—C8—C9—C10 | 63.09 (12) | C15—C14—C19—C18 | 1.62 (17) |
C3—C8—C9—C11 | 129.40 (12) | C15—C16—C17—O3 | −177.24 (10) |
C4—C3—C8—C7 | 55.64 (12) | C15—C16—C17—C18 | 2.23 (18) |
C4—C3—C8—C9 | −61.57 (11) | C16—C17—C18—C19 | −2.10 (18) |
C4—C5—C6—C7 | 58.84 (14) | C17—C18—C19—C14 | 0.15 (18) |
C4—C5—C10—C9 | −61.91 (12) | C19—C14—C15—C16 | −1.48 (18) |
C4—C5—C10—C11 | −128.65 (12) |
D—H···A | D—H | H···A | D···A | D—H···A |
O3—H3···O1i | 0.92 (2) | 1.98 (2) | 2.8955 (13) | 172 (2) |
C13—H13A···O2ii | 0.99 | 2.52 | 3.4396 (16) | 154 |
C6—H6···O1iii | 0.95 | 2.50 | 3.4473 (15) | 176 |
Symmetry codes: (i) −x, −y+1, −z+1; (ii) x−1, y, z; (iii) x+1/2, −y+1/2, z+1/2. |
Acknowledgements
We are grateful to GVSU's Weldon Fund for financial support of this work. We thank Dr Randy Winchester (GVSU) for sharing these experiments with the Fall 2023 CHM 480 course and Dr Matt Hart (GVSU) for use of the amine starting materials.
References
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