research communications
accessSynthesis, and Hirshfeld surface analysis of the two-dimensional hydrogen-bonded network [TCNQ-H2]2+[AsF6]2−
aFreie Universität Berlin, Institut für Chemie und Biochemie - Anorganische, Chemie, Fabeckstrasse 34-36, 14195 Berlin, Germany
*Correspondence e-mail: [email protected]
The structure of 2-[4-(dicyanomethyl)cyclohexa-2,5-dien-1-yl]propanebis(nitrilium) bis(hexafluoridoarsenate), C12H6N42+·2AsF6−, has orthorhombic (Cmce) symmetry. The compound exhibits a layer structure, which is formed by hydrogen bonds between the semi-protonated nitrile groups. Unexpectedly, no H⋯F contacts are observed. Instead, the [AsF6]− anions show C⋯F contacts to the positively polarized carbon atoms of the dication with distances in the range 2.871 (2)–3.154 (2) Å.
Keywords: crystal structure; tetracyanoquinodimethane; superacids; hydrogen bonded networks; nitriles.
CCDC reference: 2478779
1. Chemical context
Tetracyanoquinodimethane (TCNQ) is widely used in organic semiconductors and in charge-transfer components (Torrance, 1979
; Jérome, 2004
; Phan et al., 2015
; Potember et al., 1979
). The weakly oxidizing properties and the stability of its radical anion and diamagnetic dianion have led to a large number of structurally characterized [TCNQ]–· and [TCNQ]2– salts (Singh et al., 2016
). The oxidation potential of TCNQ can be dramatically increased to ca. 0.9 V vs Fc+/0 by the coordination of the B(C6F5)3 to every nitrile group (Albrecht et al., 2022
). Although the treatment of those nitriles with such electrophiles forming Lewis acid–base adducts is a common approach, the protonation of nitriles requires superacids such as HF/EF5 (E = As, Sb) or HSO3F/SbF5 (Olah & Kiovsky, 1968
). A few years ago, the crystal structures of some protonated nitriles were reported, including e.g. [H3CCN-H]+[AsF6]− and [H5C6CN-H]+[AsF6]− (Haiges et al., 2016
). Protonations of cyanometalates are on the other hand much more common due to the stronger basicity coming from the negative charge of the complex. Superacids can be used to convert octacyanometalates to their respective homoleptic hydrogen isocyanide complexes [M(CNH)8]4+([SbF6]−)4 (M = Mo, W; Sellin et al., 2020
).
In this work we investigated the reactivity of TCNQ with HF/AsF5. Instead of the expected fourfold protonation, we observed a di-periodic layered hydrogen-bonded network between diprotonated TCNQ moieties. In the following, its solid-state structure will be discussed.
2. Structural commentary
[TCNQ-H2]2+[AsF6]−2
crystallizes in the orthorhombic Cmce. The packing is best described as a distorted NaCl structure with a close-packed [TCNQ-H2]2+ network and one ([AsF6]−)2 moiety in each distorted octahedral void (Fig. 2
). The asymmetric unit consists of a {CH–C2–CNH} and an {AsF4} unit (Fig. 1
), whereas H01 is disordered over the mirror plane (−x, y, z) with a SOF of 0.5 giving the overall formula C12H6N4As2F12. The intermolecular distances between the nitrile groups are 2.542 (2) Å. Upon coordination of electrophiles to a C—N group, contraction of the C—N bond is expected due to electrostatic effects. Comparison to the structure of non-protonated TCNQ (Krause et al., 2015
) reveals that the C—N bond of TCNQ shortens by 0.02 Å to 1.130 (2) Å upon semi-protonation. The six-membered ring in the dication is clearly identified as a quinoidal system [bond lengths C3—C4: 1.450 (2) and C4—C4′: 1.342 (3) Å].
| Figure 1 The molecular structure of the title compound. Displacement ellipsoids shown at the 50% probability level. Hydrogen atoms displayed in mint have an site-occupancy factor (SOF) of 0.5. |
| Figure 2 Packing of the title compound in the unit cell. Displacement ellipsoids shown at the 50% probability level. Colour code: arsenic – purple; fluorine – light green; nitrogen – blue; carbon – dark grey; ordered hydrogen – white; hydrogen in PART −1 – mint. |
3. Supramolecular features
In the solid-state structures of the literature-known protonated CN—H⋯F contacts are the dominant motif regarding cation–anion interactions (Haiges et al., 2016
). However, in this structure, this motif is not observed. Instead, strong, symmetric CN—H⋯NC hydrogen bonds are formed (Table 1
, Fig. 3
). However, the complete absence of H⋯F contacts in a crystal structure of a protonated nitrile is very surprising. Instead, the [AsF6]− anions are located directly over and under the electron-deficient π-system of the [TCNQ-H2]2+ moiety (Fig. 4
). Three fluorine atoms of the [AsF6]− anion point directly to the electron deficient carbon atoms, leading to three stronger C⋯F contacts [F1—As01—C2—C3 torsion angle = 0.0 (1)°]. The other three fluorine atoms are found in a staggered geometry towards the dication [F2—As01—C2—C3 torsion angle = 61.6 (1)°], allowing more, but weaker, C⋯F contacts (Table 2![]()
). These intermolecular C⋯F contacts can also be visualized with a Hirshfeld surface (Hirshfeld et al., 1977
) in CrystalExplorer (Turner et al., 2017
). This surface shows at the F1 and F4 sites three strong interactions (red) and, at the other sites, multiple smaller interactions for F2 and F3 (pink). Still, the C⋯F contacts are rather long in the present structure (shortest C⋯F contact = 2.894 Å). A salt of triprotonated 1,3,5-tricyanobenzene [C6(CNH)3H3]3+[Sb2F11]−2[SbF6]− (Nitzer et al., 2022a
) has C⋯F contacts in the same range, as does triprotonated 1,3,5-tricarboxybenzene [C6(CO2H2)3H3]3+[SbF6]−3 (Nitzer et al., 2022b
). Besides the protonated aromatic compounds, de-electronated/oxidized aromatic compounds also have similarly short C⋯F contacts, e.g. the hexafluorobenzene radical–cation salt [C6F6]+[Sb2F11]− (Shorafa et al., 2009
), the hexamethylbenzene dication (Malischewski et al., 2017a
,b
) and the cyclopentadienium radical–cation salt [C5(C6F5)5]+[Sb3F16]− (Schulte et al., 2024
) and related perhalogenated dimers (Rupf et al., 2020
).
| |||||||||||||||||
| ||||||||||||||||||||||||||||||||||||||
| Figure 3 The di-periodic hydrogen-bonded network of the diprotonated TCNQ moieties. Displacement ellipsoids are shown at the 50% probability level. Colour code: arsenic – purple; fluorine – light green; nitrogen – blue; carbon dark grey; ordered hydrogen – white; hydrogen in PART −1 – mint. |
| Figure 4 Top: Hirshfeld surface of the [AsF6]− anion. Colour ranges from red (short contacts) over white to blue (long contacts). Bottom: Contacts of the [AsF6]− anions with the π-system of the diprotonated TCNQ. Displacement ellipsoids shown at the 50% probability level. Colour code: arsenic – purple; fluorine – light green; nitrogen – blue; carbon dark grey; ordered hydrogen – white; disordered hydrogen in PART −1 – mint. |
4. Database survey
A survey of the CSD (version 5.46, update June 2024; Groom et al., 2016
) gave 1451 hits including the TCNQ moiety. While many charge-transfer salts are known, the poor basicity of the TCNQ leads to a rare role as Lewis base with only 235 hits in the CSD and 226 of them metals. In contrast, only five non-metal coordinations are known [all to B(C6F5)3]. While the neutral TCNQ moiety coordinates only two B(C6F5)3, the [TCNQ]-/2- coordinates B(C6F5)3 on all four nitrile functions. There are 74 hits for the –CN—H motif, but only 15 of them refer to protonated (C—CN—H).
5. Synthesis and crystallization
1.0 mL of anhydrous hydrogen fluoride, 1.0 mL of sulfur dioxide and arsenic pentafluoride (64 mg, 0.4 mmol, 4.0 eq.) were condensed on TCNQ (20 mg, 0.1 mmol, 1.0 eq.) at 77 K. The solution was slowly warmed to room temperature leading to a clear orange solution. The solution was then slowly cooled down to 195 K over the course of a few days to afford yellow crystalline blocks suitable for single crystal X-ray in ca. 80% yield.
6. Refinement
Crystal data, data collection and structure details are summarized in Table 3
.
|
Supporting information
CCDC reference: 2478779
contains datablock I. DOI: https://doi.org/10.1107/S2056989025007108/dj2080sup1.cif
Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S2056989025007108/dj2080Isup2.hkl
| C12H6N42+·2AsF6− | Dx = 2.128 Mg m−3 |
| Mr = 584.05 | Mo Kα radiation, λ = 0.71073 Å |
| Orthorhombic, Cmce | Cell parameters from 9847 reflections |
| a = 11.3963 (4) Å | θ = 3.3–26.4° |
| b = 20.9925 (9) Å | µ = 3.79 mm−1 |
| c = 7.6198 (3) Å | T = 100 K |
| V = 1822.94 (12) Å3 | Block, yellow |
| Z = 4 | 0.36 × 0.18 × 0.11 mm |
| F(000) = 1120 |
| Bruker APEXII CCD diffractometer | 976 reflections with I > 2σ(I) |
| φ and ω scans | Rint = 0.013 |
| Absorption correction: multi-scan (SADABS-2016/1; Krause et al., 2015) | θmax = 26.4°, θmin = 3.3° |
| Tmin = 0.635, Tmax = 0.745 | h = −12→14 |
| 3524 measured reflections | k = −26→12 |
| 985 independent reflections | l = −9→9 |
| Refinement on F2 | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Hydrogen site location: difference Fourier map |
| R[F2 > 2σ(F2)] = 0.019 | All H-atom parameters refined |
| wR(F2) = 0.047 | w = 1/[σ2(Fo2) + (0.0178P)2 + 4.242P] where P = (Fo2 + 2Fc2)/3 |
| S = 1.12 | (Δ/σ)max = 0.001 |
| 985 reflections | Δρmax = 0.40 e Å−3 |
| 84 parameters | Δρmin = −0.43 e Å−3 |
| 0 restraints |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Hydrogen atoms at the nitrogen nuclei were refined in PART -1 |
| x | y | z | Uiso*/Ueq | Occ. (<1) | |
| As01 | 0.500000 | 0.62594 (2) | 0.48213 (3) | 0.01821 (10) | |
| F2 | 0.60728 (10) | 0.59600 (6) | 0.61714 (15) | 0.0336 (3) | |
| F1 | 0.500000 | 0.55815 (8) | 0.3601 (2) | 0.0402 (5) | |
| F4 | 0.39438 (12) | 0.65848 (7) | 0.34763 (15) | 0.0399 (3) | |
| F3 | 0.500000 | 0.69499 (8) | 0.6063 (2) | 0.0392 (5) | |
| C2 | 0.500000 | 0.63170 (11) | −0.0275 (3) | 0.0133 (5) | |
| C3 | 0.500000 | 0.56661 (11) | −0.0157 (3) | 0.0130 (4) | |
| C4 | 0.39021 (14) | 0.53182 (8) | −0.0085 (2) | 0.0147 (3) | |
| H4 | 0.3230 (18) | 0.5540 (9) | −0.014 (2) | 0.014 (5)* | |
| C1 | 0.39634 (15) | 0.66974 (8) | −0.0308 (2) | 0.0153 (3) | |
| N01 | 0.32043 (14) | 0.70440 (7) | −0.0314 (2) | 0.0212 (3) | |
| H01 | 0.274 (4) | 0.7358 (18) | −0.014 (6) | 0.017 (11)* | 0.5 |
| U11 | U22 | U33 | U12 | U13 | U23 | |
| As01 | 0.02267 (16) | 0.02017 (15) | 0.01179 (14) | 0.000 | 0.000 | 0.00001 (9) |
| F2 | 0.0290 (6) | 0.0535 (8) | 0.0182 (5) | 0.0138 (6) | −0.0012 (5) | 0.0026 (5) |
| F1 | 0.0777 (14) | 0.0240 (8) | 0.0189 (8) | 0.000 | 0.000 | −0.0067 (7) |
| F4 | 0.0408 (7) | 0.0594 (9) | 0.0194 (6) | 0.0183 (6) | −0.0044 (5) | 0.0050 (6) |
| F3 | 0.0748 (14) | 0.0217 (8) | 0.0211 (8) | 0.000 | 0.000 | −0.0023 (7) |
| C2 | 0.0162 (11) | 0.0125 (11) | 0.0113 (10) | 0.000 | 0.000 | −0.0006 (8) |
| C3 | 0.0159 (11) | 0.0139 (11) | 0.0092 (10) | 0.000 | 0.000 | −0.0006 (8) |
| C4 | 0.0115 (8) | 0.0166 (8) | 0.0160 (8) | 0.0022 (7) | 0.0000 (6) | 0.0002 (6) |
| C1 | 0.0208 (9) | 0.0103 (7) | 0.0150 (8) | −0.0040 (7) | 0.0005 (6) | 0.0001 (6) |
| N01 | 0.0226 (8) | 0.0144 (7) | 0.0267 (8) | 0.0042 (7) | 0.0015 (6) | 0.0005 (6) |
| As01—F2 | 1.7170 (11) | C2—C1 | 1.426 (2) |
| As01—F2i | 1.7170 (11) | C3—C4i | 1.450 (2) |
| As01—F1 | 1.6999 (16) | C3—C4 | 1.450 (2) |
| As01—F4i | 1.7221 (12) | C4—C4ii | 1.342 (3) |
| As01—F4 | 1.7221 (12) | C4—H4 | 0.90 (2) |
| As01—F3 | 1.7312 (17) | C1—N01 | 1.130 (2) |
| C2—C3 | 1.369 (3) | N01—H01 | 0.86 (4) |
| C2—C1i | 1.426 (2) | ||
| F2i—As01—F2 | 90.80 (8) | F4i—As01—F3 | 89.61 (6) |
| F2i—As01—F4i | 178.08 (7) | F4—As01—F3 | 89.61 (6) |
| F2—As01—F4i | 90.23 (6) | C3—C2—C1i | 124.05 (10) |
| F2i—As01—F4 | 90.24 (6) | C3—C2—C1 | 124.05 (10) |
| F2—As01—F4 | 178.08 (7) | C1i—C2—C1 | 111.9 (2) |
| F2i—As01—F3 | 88.79 (6) | C2—C3—C4 | 120.34 (11) |
| F2—As01—F3 | 88.80 (6) | C2—C3—C4i | 120.34 (11) |
| F1—As01—F2 | 91.22 (6) | C4i—C3—C4 | 119.3 (2) |
| F1—As01—F2i | 91.22 (6) | C3—C4—H4 | 118.3 (13) |
| F1—As01—F4i | 90.37 (6) | C4ii—C4—C3 | 120.34 (11) |
| F1—As01—F4 | 90.37 (6) | C4ii—C4—H4 | 121.4 (13) |
| F1—As01—F3 | 179.98 (8) | N01—C1—C2 | 173.94 (18) |
| F4i—As01—F4 | 88.68 (9) | C1—N01—H01 | 166 (3) |
| C2—C3—C4—C4ii | −178.0 (2) | C1—C2—C3—C4 | 1.0 (3) |
| C4i—C3—C4—C4ii | 1.4 (4) | C1i—C2—C3—C4 | 178.36 (18) |
| C1—C2—C3—C4i | −178.36 (18) | C1i—C2—C3—C4i | −1.0 (3) |
| Symmetry codes: (i) −x+1, y, z; (ii) x, −y+1, −z. |
| D—H···A | D—H | H···A | D···A | D—H···A |
| N01—H01···N01iii | 0.86 (4) | 1.69 (4) | 2.544 (2) | 177 (7) |
| Symmetry code: (iii) −x+1/2, −y+3/2, −z. |
| site 1 (F1+F4) | site 2 (F2+F3) | ||||
| C1···F4 | 2.893 (2) | C1···F2 | 3.097 (2) | C1···F3 | 3.053 (2) |
| C2···F4 | 3.152 (2) | C2···F3 | 3.091 (3) | C2···F2 | 3.064 (2) |
| C3···F1 | 2.869 (3) | C3···F2 | 3.115 (2) | ||
| C4···F1 | 3.124 (2) | C4···F2 | 3.155 (2) |
Funding information
We acknowledge support by the Open Access Publication Fund of the Freie Universität Berlin. Gefördert durch die Deutsche Forschungsgemeinschaft (DFG) – Projektnummer 387284271 – SFB 1349.
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