research communications
accessand Hirshfeld surface analysis of 4-bromo-6-(4-chlorophenyl)-6,7-dihydro-5H-furo[2,3-f]isoindol-5-one
aRUDN University, 6 Miklukho-Maklaya St., Moscow 117198, Russian Federation, bExcellence Center, Baku State University, Z. Khalilov Str. 33, AZ 1148, Baku, Azerbaijan, cFrumkin Institute of Physical Chemistry and Electrochemistry, Russian academy of Sciences, Leninsky prosp. 31, Build. 4, Moscow 119071, Russian Federation, dInstitute of Physical Organic Chemistry, National Academy of Sciences of Belarus, Surganov Str. 13, Minsk 220072, Belarus, eChemistry Department, Faculty of Science, Hadhramout University, Mukalla, Hadhramout, Yemen, fHacettepe University, Department of Physics, 06800 Beytepe-Ankara, Türkiye, and gAzerbaijan Medical University, Scientific Research Centre (SRC), A. Kasumzade Str. 14, AZ 1022, Baku, Azerbaijan
*Correspondence e-mail: [email protected]
The molecule of the title compound, C16H9BrClNO2, contains furan and phenyl rings and an isoindole ring system. The phenyl ring subtends a dihedral angle of 10.3 (2)° with the fused ring system. In the crystal, C—H⋯O hydrogen bonds link the molecules into a two-dimensional network nearly parallel to the ab plane, enclosing R22(6), R44(12), R44(14), R44(18) and R44(20) ring motifs. π–π stacking between the centroids of parallel rings [centroid–centroid distances = 3.919 (3)–3.695 (3) Å] helps to consolidate the packing. Hirshfeld surface analysis revealed that the most important contributions for the crystal packing are from H⋯H (21.2%), H⋯Cl/Cl⋯H (14.7%), H⋯O/O⋯H (13.9%), H⋯C/C⋯H (13.1%), H⋯Br/Br⋯H (12.3%) and C⋯C (11.6%) interactions.
CCDC reference: 2492471
1. Chemical context
Isoindoles have emerged as a significant class of in organic chemistry due to their diverse biological activities as well as their utility in material science and organocatalysis (for recent reviews, see: Chen & Zou, 2021
; Samandram et al., 2025
). Despite their importance, an efficient strategy for their synthesis remains to be found. Building on our and other studies of intramolecular Diels–Alder reactions of vinylarenes (IMDAV) (Zaytsev et al., 2021
; Krishna et al., 2022
), we now investigate how 3-(aryl)allylamines undergo IMDAV reactions with halogenated maleic anhydride (Alekseeva et al., 2020
). As well as hydrogen bonds (Burkin et al., 2024
; Maharramov et al., 2010
, 2011
; Pronina et al., 2024
), intermolecular halogen bonds can also be used in the supramolecular assembly of organic and coordination compounds and improve their functional properties (Gurbanov et al., 2022
; Shixaliyev et al., 2013
, 2014
). We have recently reported a new synthetic strategy for constructing a condensed isoindole scaffold, arising from a cascade transformation between 3-(2-furyl)allylaniline and dibromomaleic anhydride (Alekseeva et al., 2025
). Remarkably, substitution on the benzene ring of the starting aniline leads to a decrease in product yield, yet the overall reaction pathway remains unaffected, proceeding through decarboxylation and dehydrobromination. The resulting 6,7-dihydro-5H-furo[2,3-f]-isoindol-5-ones represent versatile intermediates that can be further transformed to other isoindole derivatives through Heck or Suzuki cross-coupling reactions, thereby providing a valuable entry into a broader class of functionalized isoindole derivatives (Bartolucci et al., 2012
; Kalari et al., 2017
; Alzweiri et al., 2021
; Kumar et al., 2023
). Herein, we report the synthesis and molecular and crystal structure of the title compound, 1, together with a Hirshfeld surface analysis.
2. Structural commentary
The contains one molecule comprising a pyrrole ring fused to a benzofuran ring system, and a phenyl ring with substitutions on each one of them (Fig. 1
). The individually planar rings A (O1/C2/C3/C3A/C8A), B (C3A/C4/C4A/C7A/C8/C8A) and C (C4A/C5/N6/C7/C7A), which are fused, and D (C11–C16) are oriented at dihedral angles of A/B = 0.9 (3)°, A/C = 1.8 (3)°, A/D = 10.5 (3)°, B/C = 0.9 (3)°, B/D = 10.0 (3)° and C/D = 9.9 (3)°. Thus, the A, B and C rings are essentially coplanar. The substituent atoms Br1, O2 and Cl1 are located 0.007 (1), 0.012 (4) and 0.024 (2) Å, respectively, from the best least-squares planes of the corresponding rings. The phenyl ring subtends a dihedral angle of 10.3 (2)° with the fused ring system. An intramolecular C—H⋯O occurs (Table 1
).
| |||||||||||||||||||||||||||
| Figure 1 The asymmetric unit of the title compound with the atom-numbering scheme and 50% probability ellipsoids. |
3. Supramolecular features
In the crystal, C—H⋯O hydrogen bonds (Table 1
, Fig. 2
) link the molecules into a two-dimensional network nearly parallel to the ab plane, enclosing R22(6), R44(12), R44(14), R44(18) and R44(20) ring motifs (Etter et al., 1990
). π–π interactions further consolidate the packing: between A rings [centroid-to-centroid distance = 3.919 (3) Å, α = 0.0 (3)° and slippage = 1.971 Å], B rings [centroid-to-centroid distance = 3.919 (3) Å, α = 0.0 (3)° and slippage = 1.871 Å], C rings [centroid-to-centroid distance = 3.920 (3) Å, α = 0.0 (3)° and slippage = 1.926 Å], D rings [centroid-to-centroid distance = 3.919 (3) Å, α = 0.0 (3)° and slippage = 2.022 Å], A and C rings [centroid-to-centroid distance = 3.642 (3) Å, α = 0.9 (3)° and slippage = 1.289 Å] and B and C rings [centroid-to-centroid distance = 3.695 (3) Å, α = 0.9 (3)° and slippage = 1.384 Å].
| Figure 2 A partial packing diagram of the title compound with C—H⋯O hydrogen bonds shown as dashed lines. H atoms not involved in these interactions have been omitted for clarity. |
4. Hirshfeld surface analysis
To visualize the intermolecular interactions, a Hirshfeld surface (HS) analysis was carried out using Crystal Explorer 17.5 (Spackman et al., 2021
). In the HS plotted over dnorm (Fig. 3
), the contact distances equal, shorter and longer with respect to the sum of van der Waals radii are shown in white, red and blue, respectively. According to the two-dimensional fingerprint plots, H⋯H, H⋯Cl/Cl⋯H, H⋯O/O⋯H, H⋯C/C⋯H, H⋯Br/Br⋯H and C⋯C contacts make the most important contributions to the HS (Table 2
, Fig. 4
).
|
| Figure 3 View of the three-dimensional Hirshfeld surface for title molecule plotted over dnorm. |
| Figure 4 The full two-dimensional fingerprint plots for title molecule, showing (a) all interactions, and delineated into (b) H⋯H, (c) H⋯Cl/Cl⋯H, (d) H⋯O/O⋯H, (e) H⋯C/C⋯H, (f) H⋯Br/Br⋯H, (g) C⋯C, (h) C⋯O/O⋯C, (i) C⋯Br/Br⋯C, (j) H⋯N/N⋯H, (k) Cl⋯Br/Br⋯Cl, (l) C⋯Cl/Cl⋯C, (m) Cl⋯Cl, (n) Br⋯Br, (o) C⋯N/N⋯C and (p) O⋯O interactions. The di and de values are the closest internal and external distances (in Å) from given points on the Hirshfeld surface. |
5. Synthesis and crystallization
4-Chloro-N-[(2E)-3-(furan-2-yl)prop-2-en-1-yl]aniline (0.30 g, 1.3 mmol) (2) was dissolved in dry CH2Cl2 (10 mL) and cooled to 251 K. Dibromomaleic anhydride (0.33 g, 1.3 mmol) was added, and the mixture was kept at 269 K for 1 d. The resulting precipitate was filtered off, dissolved in dry DMSO (10 mL), and stirred at 353 K for 10 h. The mixture was poured into water (50 mL), then resulting precipitate was filtered, and washed by water (3 × 3 mL). The product was dried in the air to constant weight to afford compound 1 as light-yellow solid (117.8 mg, 0.33 mmol, 25%, m.p.: 532-533 K). A single crystal suitable for X-ray analysis was obtained from DMSO-d6 with heating to 353 K and following slow cooling to r.t. The reaction scheme is shown in Fig. 5
). 1H NMR (700.2 MHz, DMSO-d6, 353 K) (J, Hz): δ 8.17 (d, J = 1.4, 1H, H-2-furyl), 7.91 (d, J = 8.6, 2H, H-2,6-C6H4Cl), 7.85 (s, 1H, H-8), 7.47 (d, J = 8.8, 2H, H-3,5-C6H4Cl), 7.06 (br.s., 1H, H-3-furyl), 4.99 (s, 2H, H-7) ppm. 13C{1H}NMR (176.1 MHz, DMSO-d6, 353 K) δ 164.2 (C=O), 155.7, 147.9, 139.4, 138.0, 129.8, 128.4 (2C, C-2,6-C6H4Cl), 127.8, 124.0, 120.8 (2C, C-3,5- C6H4Cl), 110.0, 106.5, 105.5, 48.7 ppm. IR (KBr), ν (cm−1) 3732, 3117, 3075, 2927, 1688, 1495, 1385, 1288, 1261, 1065, 825, 758. Analysis calculated for C16H9BrClNO2: C 53.00, H 2.50, N 3.86; found C 52.81, H 2.38, N 3.69.
| | Figure 5 Reaction scheme for obtaining the title compound (1). |
6. Refinement
Crystal data, data collection and structure details are summarized in Table 3
. The C-bond hydrogen-atom positions were calculated geometrically at distances of 0.95 Å (for aromatic CH) and 0.99 Å (for methylene CH) and refined using a riding model by applying the constraint Uiso(H) = 1.2Ueq(C).
|
Supporting information
CCDC reference: 2492471
contains datablocks I, global. DOI: https://doi.org/10.1107/S2056989025008606/jy2067sup1.cif
Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S2056989025008606/jy2067Isup2.hkl
Supporting information file. DOI: https://doi.org/10.1107/S2056989025008606/jy2067Isup3.cml
| C16H9BrClNO2 | F(000) = 720 |
| Mr = 362.60 | Dx = 1.817 Mg m−3 |
| Monoclinic, P21/n | Mo Kα radiation, λ = 0.71073 Å |
| a = 3.9194 (7) Å | Cell parameters from 1710 reflections |
| b = 12.594 (2) Å | θ = 3.0–28.1° |
| c = 26.858 (4) Å | µ = 3.31 mm−1 |
| β = 91.083 (6)° | T = 100 K |
| V = 1325.5 (4) Å3 | Plate, colourless |
| Z = 4 | 0.50 × 0.08 × 0.02 mm |
| Bruker KAPPA APEXII area-detector diffractometer | 1967 reflections with I > 2σ(I) |
| φ and ω scans | Rint = 0.132 |
| Absorption correction: multi-scan (SADABS; Krause et al., 2015) | θmax = 27.5°, θmin = 4.1° |
| Tmin = 0.556, Tmax = 1.000 | h = −5→4 |
| 12749 measured reflections | k = −16→16 |
| 2992 independent reflections | l = −34→34 |
| Refinement on F2 | 0 restraints |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| R[F2 > 2σ(F2)] = 0.062 | H-atom parameters constrained |
| wR(F2) = 0.144 | w = 1/[σ2(Fo2) + 0.5333P] where P = (Fo2 + 2Fc2)/3 |
| S = 1.04 | (Δ/σ)max < 0.001 |
| 2992 reflections | Δρmax = 1.01 e Å−3 |
| 190 parameters | Δρmin = −0.99 e Å−3 |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| x | y | z | Uiso*/Ueq | ||
| Br1 | 0.49744 (14) | 0.80459 (5) | 0.13637 (2) | 0.02236 (18) | |
| Cl1 | 1.0284 (4) | 0.67377 (13) | 0.49698 (5) | 0.0357 (4) | |
| O1 | −0.0949 (10) | 0.4518 (3) | 0.10290 (13) | 0.0254 (9) | |
| O2 | 0.7205 (10) | 0.7699 (3) | 0.25059 (13) | 0.0228 (9) | |
| N6 | 0.5883 (11) | 0.6079 (4) | 0.28682 (15) | 0.0191 (10) | |
| C2 | −0.0979 (15) | 0.5213 (5) | 0.06345 (19) | 0.0265 (14) | |
| H2A | −0.200214 | 0.505380 | 0.031985 | 0.032* | |
| C3 | 0.0575 (14) | 0.6138 (5) | 0.07363 (19) | 0.0219 (13) | |
| H3A | 0.079676 | 0.673342 | 0.052237 | 0.026* | |
| C3A | 0.1838 (14) | 0.6031 (5) | 0.12427 (19) | 0.0210 (12) | |
| C4 | 0.3565 (14) | 0.6695 (4) | 0.15773 (19) | 0.0191 (12) | |
| C4A | 0.4241 (14) | 0.6307 (4) | 0.20511 (18) | 0.0197 (12) | |
| C5 | 0.5962 (14) | 0.6812 (5) | 0.24847 (19) | 0.0217 (13) | |
| C7A | 0.3151 (14) | 0.5294 (5) | 0.21916 (18) | 0.0210 (12) | |
| C7 | 0.4199 (14) | 0.5088 (4) | 0.27276 (18) | 0.0202 (12) | |
| H7A | 0.218906 | 0.495166 | 0.293605 | 0.024* | |
| H7B | 0.578659 | 0.447864 | 0.275526 | 0.024* | |
| C8A | 0.0764 (14) | 0.5035 (5) | 0.14046 (19) | 0.0216 (13) | |
| C8 | 0.1392 (14) | 0.4615 (5) | 0.18745 (19) | 0.0236 (13) | |
| H8A | 0.068007 | 0.392468 | 0.196964 | 0.028* | |
| C11 | 0.7085 (14) | 0.6249 (5) | 0.33650 (19) | 0.0203 (12) | |
| C12 | 0.8993 (14) | 0.7137 (4) | 0.35026 (19) | 0.0214 (12) | |
| H12A | 0.964013 | 0.763946 | 0.325817 | 0.026* | |
| C13 | 0.9952 (15) | 0.7287 (5) | 0.4000 (2) | 0.0258 (13) | |
| H13A | 1.121382 | 0.789909 | 0.409754 | 0.031* | |
| C14 | 0.9054 (15) | 0.6538 (5) | 0.43502 (19) | 0.0245 (13) | |
| C15 | 0.7284 (15) | 0.5643 (5) | 0.4216 (2) | 0.0272 (14) | |
| H15A | 0.675257 | 0.512542 | 0.445981 | 0.033* | |
| C16 | 0.6270 (14) | 0.5492 (5) | 0.37244 (19) | 0.0229 (13) | |
| H16A | 0.501947 | 0.487489 | 0.363146 | 0.027* |
| U11 | U22 | U33 | U12 | U13 | U23 | |
| Br1 | 0.0309 (4) | 0.0180 (4) | 0.0183 (3) | −0.0014 (2) | 0.00298 (19) | 0.0033 (2) |
| Cl1 | 0.0482 (11) | 0.0405 (12) | 0.0181 (7) | 0.0113 (7) | −0.0062 (6) | −0.0066 (6) |
| O1 | 0.029 (3) | 0.028 (3) | 0.019 (2) | −0.0065 (17) | 0.0006 (16) | −0.0044 (17) |
| O2 | 0.036 (3) | 0.014 (3) | 0.0179 (19) | −0.0052 (16) | 0.0019 (15) | 0.0007 (15) |
| N6 | 0.029 (3) | 0.012 (3) | 0.016 (2) | −0.0013 (18) | 0.0023 (18) | 0.0014 (18) |
| C2 | 0.030 (4) | 0.036 (4) | 0.013 (3) | −0.001 (3) | 0.000 (2) | 0.001 (2) |
| C3 | 0.029 (4) | 0.018 (4) | 0.019 (3) | 0.001 (2) | 0.005 (2) | 0.001 (2) |
| C3A | 0.022 (4) | 0.021 (4) | 0.020 (3) | −0.001 (2) | 0.007 (2) | 0.001 (2) |
| C4 | 0.028 (4) | 0.011 (3) | 0.018 (3) | 0.003 (2) | 0.006 (2) | 0.000 (2) |
| C4A | 0.025 (4) | 0.017 (4) | 0.018 (3) | −0.001 (2) | 0.008 (2) | 0.000 (2) |
| C5 | 0.026 (4) | 0.021 (4) | 0.018 (3) | 0.004 (2) | 0.005 (2) | −0.002 (2) |
| C7A | 0.025 (4) | 0.022 (4) | 0.016 (3) | 0.002 (2) | 0.002 (2) | 0.000 (2) |
| C7 | 0.032 (4) | 0.015 (4) | 0.013 (2) | −0.002 (2) | 0.002 (2) | −0.001 (2) |
| C8A | 0.023 (4) | 0.022 (4) | 0.020 (3) | −0.002 (2) | 0.000 (2) | −0.003 (2) |
| C8 | 0.028 (4) | 0.020 (4) | 0.023 (3) | 0.003 (2) | 0.004 (2) | −0.002 (2) |
| C11 | 0.022 (4) | 0.020 (4) | 0.019 (3) | 0.005 (2) | 0.001 (2) | 0.000 (2) |
| C12 | 0.027 (4) | 0.020 (4) | 0.017 (3) | 0.004 (2) | 0.002 (2) | 0.000 (2) |
| C13 | 0.030 (4) | 0.019 (4) | 0.028 (3) | 0.006 (2) | −0.005 (2) | −0.005 (2) |
| C14 | 0.036 (4) | 0.019 (4) | 0.018 (3) | 0.012 (2) | −0.004 (2) | −0.003 (2) |
| C15 | 0.031 (4) | 0.028 (4) | 0.022 (3) | 0.008 (3) | 0.004 (2) | 0.006 (3) |
| C16 | 0.033 (4) | 0.019 (4) | 0.016 (3) | 0.004 (2) | 0.001 (2) | −0.003 (2) |
| Br1—C4 | 1.882 (5) | C7A—C8 | 1.381 (7) |
| Cl1—C14 | 1.742 (5) | C7A—C7 | 1.512 (7) |
| O1—C8A | 1.367 (6) | C7—H7A | 0.9900 |
| O1—C2 | 1.375 (6) | C7—H7B | 0.9900 |
| O2—C5 | 1.219 (6) | C8A—C8 | 1.386 (7) |
| N6—C5 | 1.384 (7) | C8—H8A | 0.9500 |
| N6—C11 | 1.423 (6) | C11—C12 | 1.392 (8) |
| N6—C7 | 1.458 (7) | C11—C16 | 1.397 (7) |
| C2—C3 | 1.340 (8) | C12—C13 | 1.394 (7) |
| C2—H2A | 0.9500 | C12—H12A | 0.9500 |
| C3—C3A | 1.445 (7) | C13—C14 | 1.383 (8) |
| C3—H3A | 0.9500 | C13—H13A | 0.9500 |
| C3A—C4 | 1.393 (7) | C14—C15 | 1.368 (8) |
| C3A—C8A | 1.395 (8) | C15—C16 | 1.385 (7) |
| C4—C4A | 1.384 (7) | C15—H15A | 0.9500 |
| C4A—C7A | 1.399 (8) | C16—H16A | 0.9500 |
| C4A—C5 | 1.479 (7) | ||
| Br1···O2 | 3.204 (4) | H7B···O2i | 2.48 |
| C16···Br1i | 3.424 (6) | O2···H8Aii | 2.39 |
| H16A···Br1i | 3.03 | C5···H12A | 2.71 |
| Br1···H16Aii | 3.02 | C7···H16A | 2.46 |
| O1···C13iii | 3.218 (7) | C16···H7A | 2.72 |
| O2···C12 | 2.844 (6) | C16···H7B | 2.90 |
| O2···H12A | 2.23 | H7A···H16A | 2.16 |
| C8A—O1—C2 | 105.2 (4) | N6—C7—H7B | 111.3 |
| C5—N6—C11 | 125.9 (5) | C7A—C7—H7B | 111.3 |
| C5—N6—C7 | 113.3 (4) | H7A—C7—H7B | 109.2 |
| C11—N6—C7 | 120.8 (4) | O1—C8A—C8 | 124.5 (5) |
| C3—C2—O1 | 113.5 (5) | O1—C8A—C3A | 110.2 (5) |
| C3—C2—H2A | 123.2 | C8—C8A—C3A | 125.3 (5) |
| O1—C2—H2A | 123.2 | C7A—C8—C8A | 113.8 (5) |
| C2—C3—C3A | 104.9 (5) | C7A—C8—H8A | 123.1 |
| C2—C3—H3A | 127.5 | C8A—C8—H8A | 123.1 |
| C3A—C3—H3A | 127.5 | C12—C11—C16 | 119.5 (5) |
| C4—C3A—C8A | 119.0 (5) | C12—C11—N6 | 122.5 (5) |
| C4—C3A—C3 | 134.8 (5) | C16—C11—N6 | 118.0 (5) |
| C8A—C3A—C3 | 106.1 (5) | C11—C12—C13 | 119.8 (5) |
| C4A—C4—C3A | 117.6 (5) | C11—C12—H12A | 120.1 |
| C4A—C4—Br1 | 123.2 (4) | C13—C12—H12A | 120.1 |
| C3A—C4—Br1 | 119.2 (4) | C14—C13—C12 | 119.5 (6) |
| C4—C4A—C7A | 121.0 (5) | C14—C13—H13A | 120.3 |
| C4—C4A—C5 | 130.4 (5) | C12—C13—H13A | 120.3 |
| C7A—C4A—C5 | 108.5 (5) | C15—C14—C13 | 121.1 (5) |
| O2—C5—N6 | 126.2 (5) | C15—C14—Cl1 | 120.0 (5) |
| O2—C5—C4A | 127.4 (5) | C13—C14—Cl1 | 118.8 (5) |
| N6—C5—C4A | 106.4 (5) | C14—C15—C16 | 119.9 (5) |
| C8—C7A—C4A | 123.3 (5) | C14—C15—H15A | 120.0 |
| C8—C7A—C7 | 127.2 (5) | C16—C15—H15A | 120.0 |
| C4A—C7A—C7 | 109.5 (4) | C15—C16—C11 | 120.0 (5) |
| N6—C7—C7A | 102.3 (4) | C15—C16—H16A | 120.0 |
| N6—C7—H7A | 111.3 | C11—C16—H16A | 120.0 |
| C7A—C7—H7A | 111.3 |
| Symmetry codes: (i) −x+3/2, y−1/2, −z+1/2; (ii) −x+1/2, y+1/2, −z+1/2; (iii) −x+1/2, y−1/2, −z+1/2. |
| D—H···A | D—H | H···A | D···A | D—H···A |
| C7—H7B···O2i | 0.99 | 2.48 | 3.387 (7) | 152 |
| C8—H8A···O2iii | 0.95 | 2.39 | 3.267 (7) | 154 |
| C12—H12A···O2 | 0.95 | 2.22 | 2.844 (6) | 122 |
| Symmetry codes: (i) −x+3/2, y−1/2, −z+1/2; (iii) −x+1/2, y−1/2, −z+1/2. |
Acknowledgements
The authors' contributions are as follows. Conceptualization, AVG and TH; synthesis, KAA and EAS; X-ray analysis, AVG, MSG and TH; Hirshfeld surface analysis, TH; founding, KIH; writing (review and editing of the manuscript) AVG, IAK and TH, supervision, TH and MHAD.
Funding information
Funding for this research was provided by the Russian Science Foundation (project No. 23–43-10024) and the Belarusian Republican Foundation for Fundamental Research (project No. X23RNF-051). This work has also been supported by Baku State University and Azerbaijan Medical University. TH is also grateful to Hacettepe University Scientific Research Project Unit (grant No. 013 D04 602 004).
References
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