research communications\(\def\hfill{\hskip 5em}\def\hfil{\hskip 3em}\def\eqno#1{\hfil {#1}}\)

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ISSN: 2056-9890

Crystal structures of (S)-(−)-1-(4-chloro­phen­yl)-N-[(pyridin-2-yl)methyl­­idene]ethan-1-amine and its cis-di­chlorido­{(S)-(−)-1-(4-chloro­phen­yl)-N-[(pyridin-2-yl)methyl­­idene]ethan-1-amine}palladium(II) complex

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aLab. Síntesis de Complejos, Fac. Cs. Quím. Benemérita Universidad, Autónoma de Puebla, Ciudad Universitaria, PO, Box, 72592 Puebla, Mexico, bLab. Síntesis de Complejos, Fac. Cs. Quím., Benemérita Universidad Autónoma de Puebla, Ciudad Universitaria, PO Box 72592, Puebla, Mexico, cInstituto de Química Universidad Autónoma de México UNAM, Circuito Exterior Cd. Universitaria, PO Box 04510, Ciudad de México, Mexico, and dCentro de Química, ICUAP, Benemérita Universidad Autónoma de Puebla, 72570 Puebla, Mexico
*Correspondence e-mail: [email protected]

Edited by M. Weil, Vienna University of Technology, Austria (Received 17 October 2025; accepted 18 December 2025; online 8 January 2026)

One of the title compounds, the chiral Schiff base (S)-(−)-1-(4-chloro­phen­yl)-N-[(pyridin-2-yl)methyl­idene]ethan-1-amine (C14H13ClN2) crystallizes in the monoclinic Sohncke space group P21 with one mol­ecule in the asymmetric unit. The ligand is obtained by condensation of (S)-(−)-1-(4-chloro­phen­yl)ethan-1-amine with 2-pyridine­carboxaldehyde. Its palladium(II) chloride complex, cis-di­chlorido­{(S)-(−)-1-(4-chloro­phen­yl)-N-[(pyridin-2-yl)methyl­idene]ethan-1-amine-κ2N,N′}palladium(II), [PdCl2(C14H13ClN2)], crystallizes in the ortho­rhom­bic Sohncke space group P212121, with one mol­ecule in the asymmetric unit. The central PdII atom adopts a slightly distorted square-planar coordination environment, defined by two nitro­gen donors (pyridyl-N and imine-N) and two chlorido ligands in a cis arrangement.

1. Chemical context

Mol­ecules containing imine or azomethine C=N groups are widespread in chemical and biological systems. Schiff bases, formed readily by the condensation of aldehydes or ketones with primary amines, are synthetically accessible and structurally versatile (Anzaldo Olivares et al., 2019View full citation; Hernández Téllez et al., 2025View full citation). These features make them particularly valuable in coordination chemistry, enabling the rational design of various metal complexes (Dalia et al., 2018View full citation). In d-block chemistry, Schiff-base ligands can stabilize metals in multiple oxidation states, while systematic modifications of the imine framework allows fine-tuning of electronic and steric properties (Takeda et al., 2023View full citation).

Chelation governs many processes in organometallic and bioinorganic chemistry: steric factors strongly influence coordination, geometry and reactivity (Mandal & Pratihar, 2023View full citation; Fabbrizzi, 2020View full citation). In particular, PdII complexes are central in catalytic reactions; their kinetic reactivity often exceeds that of PtII analogues by 4-5 orders of magnitude (Bugarčić et al., 2015View full citation).

Herein we report the synthesis and crystal structures of a chiral Schiff base, C14H13ClN2, and its corresponding PdCl2 complex, [PdCl2(C14H13ClN2)].

[Scheme 1]

2. Structural commentary

The mol­ecular structure of the Schiff base ligand is shown in Fig. 1[link]. The crystal belongs to the monoclinic Sohncke space group P21 and the mol­ecule displays the E configuration about the C=N double bond and the (S) configuration at the stereogenic center. The free ligand exhibits an imine C9=N1 bond length of 1.253 (4) Å, within the expected range for >C=N bonds, and a C7—N1—C9 bond angle of 117.4 (3)°, consistent with sp2 hybridization at C9 and N1. The ligand adopts a conformation governed by steric repulsion: the two aromatic rings are not coplanar, the angle between the plane defined by ring N2–C14–C13–C12–C11–C10 and the plane defined by ring C6–C1–C2–C3–C4–C5 is 32.08 (16)°.

[Figure 1]
Figure 1
Mol­ecular structure of (S)-(−)-1-(4-chloro­phen­yl)-N-[(pyridin-2-yl)methyl­idene]ethan-1-amine. Displacement ellipsoids are drawn at the 30% probability level; H atoms are given as spheres of arbitrary radius.

The corresponding PdCl2 complex crystallizes in the ortho­rhom­bic Sohncke space group P212121, with one mol­ecule in the asymmetric unit. The imine ligand bonds to the PdII atom via two nitro­gen donors (imine N1 and pyridyl N2) within an N^N five-membered chelate ring. Together with the two chlorido ligands, a distorted square-planar coordination is realized (Fig. 2[link]), with an N1—Pd—N2 bite angle of 80.8 (3)°. Observed bond lengths are Pd1—N1 = 2.045 (8) Å, Pd1—N2 = 2.036 (8) Å, Pd1—Cl1 = 2.291 (3) Å and Pd1—N2 = 2.282 (3) Å, values consistent with closely related Pd(II) complexes. The Cl1—Pd—Cl2 angle of 90.85 (9)° approximates the ideal 90° for ideal square-planar coordination. The imine bond in the complex, C9=N1 = 1.287 (10) Å, is slightly longer than in the free ligand and, together with a C7—N1—C9 angle of 122.0 (8)°, is consistent with sp2 hybridization. The Pd(II) atom lies 0.012 Å out of the mean N2Cl2 coordination plane. Coordination to the metal increases steric effects in the ligand backbone, reflected by the change in torsion angle C1—C7—N1—C9 from −142.4 (3)° in the free ligand to 24.3 (12)° in the complex. Weak intra­molecular C—H⋯Cl inter­actions stabilize the mol­ecular conformation (Table 1[link]; entries 3–5)

Table 1
Hydrogen-bond geometry (Å, °) for the PdCl2 complex[link]

D—H⋯A D—H H⋯A DA D—H⋯A
C2—H2⋯Cl2i 0.95 2.83 3.4765 (5) 126
C6—H6⋯Cl2ii 0.95 2.73 3.5996 (5) 153
C7—H7⋯Cl1 1.00 2.80 3.318 (10) 113
C8—H8A⋯Cl1 0.98 2.78 3.464 (11) 127
C14—H14⋯Cl2 0.95 2.63 3.207 (11) 120
Symmetry codes: (i) Mathematical equation; (ii) Mathematical equation.
[Figure 2]
Figure 2
Mol­ecular structure of the di­chlorido­{(S)-(−)-1-(4-chloro­phen­yl)-N-[(pyri­din-2-yl)methyl­idene]ethan-1-amine}­palladium(II) complex. Displacement ellipsoids are drawn at the 30% probability level; H atoms are given as spheres of arbitrary radius.

3. Supra­molecular features

Packing analysis of the imine ligand reveals no significant hydrogen-bonding inter­actions, and ππ stacking is negligible: centroid-to-centroid separations exceed 4.50 Å, larger than the typical range of 3.30–3.80 Å for these inter­actions (Fig. 3[link]).

[Figure 3]
Figure 3
Crystal packing of the imine ligand. Displacement ellipsoids are as in Fig. 1[link]; all H atoms have been omitted for clarity.

In the crystal of the palladium complex, some short inter­molecular contacts organize the packing into extended motifs. Numerical data of inter­molecular C—H⋯Cl inter­actions are listed in Table 1[link] (entries 1–2), and additional inter­actions are observed [Pd1⋯Cl2(x − Mathematical equation, −y + Mathematical equation, −z + 1) = 3.798 (3) Å; Pd1⋯Cl3(−x + 2, y − Mathematical equation, −z + Mathematical equation) = 3.80 (1) Å]. Weak ππ stacking is present here with centroid-to-centroid separations falling within the typical range of 3.30–3.80 Å: the centroid of the C6–C1–C2–C3–C4–C5 ring is located 3.5915 (5) Å from the centroid of the N2–C14–C13–C12–C11–C10 ring with a slippage of 0.356 Å. A short inter­molecular contact Pd1⋯H13 = 2.905 Å is also identified. All of these contacts contribute to the packing of the crystal (Fig. 4[link]). The shortest Pd⋯Pd separations exceed 6.00 Å, indicating the absence of significant metal–metal inter­actions.

[Figure 4]
Figure 4
Crystal packing of the PdII complex; hydrogen bonds are shown as dashed lines. Displacement ellipsoids are drawn at the 30% probability level. All H atoms not involved in these inter­actions have been omitted for clarity

4. Database survey

A search in the Cambridge Structural Database (CSD, Version 5.42, April 2025; Groom et al., 2016View full citation) revealed numerous PdII complexes featuring N^N bidentate ligands with a square-planar coordination environment. Representative examples include GUTRAS, a palladium complex where the metal is coordinated by pyridine–oxazoline (Pyox) moieties bearing binaftyl and biaryl bridges (Guo et al., 2025View full citation); AJADOH, containing sterically hindered Pyox ligands bound to PdCl2 in a cis configuration (Chen et al., 2019View full citation); IBEKUY, which displays the typical square-planar environment expected for [PdIICl2L] complexes (Gutiérrez et al., 2015View full citation). Complexes ITAJEV, ITAJIZ, and ITAJOF, derived from (imino)­pyridine ligands, show an N^N bidentate coordination mode leading to slightly distorted square-planar environments (Ngcobo et al., 2021View full citation). Similarly, IVIREM exhibits elongated Pd—N bond lengths attributed to steric and electron-donating effects (Tang et al., 2016View full citation). KELRAV contains an R-configured Pyox ligand coordinating in a planar fashion (Dodd et al., 2006View full citation). Other examples include MOBSED and MOBSUT, which incorporate hemilabile 2-(1H-imidazol-2-yl)pyridine and 2-(oxazol-2-yl)pyridine ligands forming five-membered chelate rings (Eseola et al., 2014View full citation); ONACEO, ONACIS, and ONACOY, which feature moderately bulky Pyox ligands in a square-planar PdCl2 array (Tian et al., 2021View full citation); PAGJAJ and PAGJEN show that Pd—N(pyridine) bonds are typically longer than Pd—N(imine) bonds due to the trans influence of coordinating substituents (Bastero et al., 2004View full citation). PIKJEA presents a distorted four-coordinate environment involving two chlorido ligands and two nitro­gen donors of an R-enanti­omeric ligand (De Crisci et al., 2013View full citation); QASXIR and QASXOX display cis chelation and near-ideal square-planar geometry, with short Pd⋯Pd inter­molecular contacts within the crystal structure (Mishnev et al., 2000View full citation); QEJSAZ, where C—H⋯Cl and C—H⋯O inter­actions consolidate the packing of the PdII complex (Svensson et al., 1999View full citation), RILLUW, corresponding to a PdCl2 complex employed in a novel enanti­oselective Pd-catalyzed 6-endo amino­acet­oxy­lation of unactivated alkenes (Qi et al., 2018View full citation); RUCXOF01 and RUCXUL01, involve quinoline-oxazoline (Quox) ligands, which promote a cis square-planar coordination environment around PdII. This arrangement has been associated with enhanced enanti­oselective control in catalytic transformations; WUMLEV and WUMLIZ show a slightly tetra­hedrally distorted square-planar environment, with donor atoms deviating from the coordination plane (Bastero et al., 2002View full citation).

5. Synthesis and crystallization

Under solvent-free conditions, a 1:1 molar mixture of (S)-(−)-1-(4-chloro­phen­yl)ethan-1-amine (0.222 g, 1.42 mmol) and 2-pyridine­carboxaldehyde (0.152 g, 1.42 mmol) was stirred at room temperature, producing a white solid. The crude product was recrystallized twice from hexa­ne/CH2Cl2 to give colorless crystals of the ligand.

For complex formation, a solution of bis­(benzo­nitrile)­palladium(II) chloride (0.100 g, 0.40 mmol) in CH2Cl2 (5 ml) was combined with a CH2Cl2 solution (10 ml) of (S)-(−)-N-[(2-pyrid­yl)methyl­idene]-1-(4-chloro­phen­yl)ethan-1-amine (0.157 g, 0.40 mmol). The mixture was stirred at room temperature for 24 h, during which a light-orange precipitate formed. The solid was collected by filtration and recrystallized from hexa­ne/CH2Cl2 to afford light-orange crystals of the PdII complex.

6. Refinement

Crystal data, data collection and structure refinement details are summarized in Table 2[link]. For H atoms, Uiso(H) was set to 1.2xUeq of the parent carbon for CH and aromatic/amide hydrogen atoms, and to 1.5xUeq for methyl (CH3) groups. Hydrogen atoms were placed in geometrically idealized positions and refined using a riding model: the tertiary CH attached to C7 (H7) was refined as a ternary CH in riding mode, and the aromatic/amide hydrogen atoms attached to C2, C3, C5, C6, C9, C11, C12, C13 and C14 were refined with riding coordinates. The methyl group at C8 (H8A, H8B, H8C) was treated as an idealized methyl and refined as a rotating group.

Table 2
Experimental details

  C14H13ClN2 [PdCl2(C14H13ClN2)]
Crystal data
Mr 244.71 422.01
Crystal system, space group Monoclinic, P21 Orthorhombic, P212121
Temperature (K) 293 150
a, b, c (Å) 5.6763 (2), 8.5159 (4), 13.7606 (6) 10.2429 (9), 11.4188 (14), 12.9466 (17)
α, β, γ (°) 90, 89.226 (4), 90 90, 90, 90
V3) 665.11 (5) 1514.3 (3)
Z 2 4
Radiation type Mo Kα Mo Kα
μ (mm−1) 0.27 1.74
Crystal size (mm) 0.7 × 0.59 × 0.08 0.62 × 0.24 × 0.12
 
Data collection
Diffractometer Xcalibur, Atlas, Gemini Xcalibur, Atlas, Gemini
Absorption correction Gaussian [CrysAlis PRO (Rigaku OD, 2015View full citation) using a multifaceted crystal model based on expressions derived by Clark & Reid (1995View full citation)] Analytical [CrysAlis PRO (Rigaku OD, 2015View full citation) using a multifaceted crystal model based on expressions derived by Clark & Reid (1995View full citation)]
Tmin, Tmax 0.923, 0.989 0.870, 0.966
No. of measured, independent and observed [I > 2σ(I)] reflections 41587, 3728, 2109 16724, 3328, 2665
Rint 0.050 0.064
(sin θ/λ)max−1) 0.694 0.641
 
Refinement
R[F2 > 2σ(F2)], wR(F2), S 0.043, 0.123, 1.01 0.046, 0.092, 1.07
No. of reflections 3728 3328
No. of parameters 155 182
No. of restraints 1 0
H-atom treatment H-atom parameters constrained H-atom parameters constrained
Δρmax, Δρmin (e Å−3) 0.15, −0.19 1.38, −0.67
Absolute structure Flack x determined using 770 quotients [(I+)−(I)]/[(I+)+(I)] (Parsons et al., 2013View full citation) Flack x determined using 1011 quotients [(I+)−(I)]/[(I+)+(I)] (Parsons et al., 2013View full citation)
Absolute structure parameter −0.03 (3) −0.06 (3)
Computer programs: CrysAlis PRO (Rigaku OD, 2015View full citation), SHELXS (Sheldrick, 2008View full citation), OLEX2.solve (Bourhis et al., 2015View full citation), SHELXL (Sheldrick, 2015View full citation) and OLEX2 (Dolomanov et al., 2009View full citation).

Supporting information


Computing details top

(S)-(-)-1-(4-Chlorophenyl)-N-[(pyridin-2-yl)methylidene]ethan-1-amine (im-i-l_mo) top
Crystal data top
C14H13ClN2F(000) = 256
Mr = 244.71Dx = 1.222 Mg m3
Monoclinic, P21Mo Kα radiation, λ = 0.71073 Å
a = 5.6763 (2) ÅCell parameters from 6050 reflections
b = 8.5159 (4) Åθ = 3.6–21.3°
c = 13.7606 (6) ŵ = 0.27 mm1
β = 89.226 (4)°T = 293 K
V = 665.11 (5) Å3Block, colourless
Z = 20.7 × 0.59 × 0.08 mm
Data collection top
Xcalibur, Atlas, Gemini
diffractometer
2109 reflections with I > 2σ(I)
Detector resolution: 10.5564 pixels mm-1Rint = 0.050
ω scansθmax = 29.6°, θmin = 3.0°
Absorption correction: gaussian
[CrysAlisPro (Rigaku OD, 2015) using a multifaceted crystal model based on expressions derived by Clark & Reid (1995)]
h = 77
Tmin = 0.923, Tmax = 0.989k = 1111
41587 measured reflectionsl = 1919
3728 independent reflections
Refinement top
Refinement on F2Hydrogen site location: inferred from neighbouring sites
Least-squares matrix: fullH-atom parameters constrained
R[F2 > 2σ(F2)] = 0.043 w = 1/[σ2(Fo2) + (0.0513P)2 + 0.0411P]
where P = (Fo2 + 2Fc2)/3
wR(F2) = 0.123(Δ/σ)max < 0.001
S = 1.01Δρmax = 0.15 e Å3
3728 reflectionsΔρmin = 0.19 e Å3
155 parametersAbsolute structure: Flack x determined using 770 quotients [(I+)-(I-)]/[(I+)+(I-)] (Parsons et al., 2013)
1 restraintAbsolute structure parameter: 0.03 (3)
Primary atom site location: structure-invariant direct methods
Special details top

Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/Ueq
C10.0976 (5)0.3440 (3)0.0974 (2)0.0655 (7)
C20.0177 (6)0.4177 (4)0.0148 (3)0.0787 (9)
H20.1210090.4756880.0182490.094*
C30.1379 (6)0.4075 (4)0.0723 (2)0.0817 (9)
H30.0810070.4574790.1272860.098*
C40.3412 (5)0.3233 (4)0.0769 (2)0.0761 (8)
C50.4257 (5)0.2472 (4)0.0028 (3)0.0803 (9)
H50.5640100.1890090.0016400.096*
C60.3029 (5)0.2578 (4)0.0903 (2)0.0737 (8)
H60.3595860.2062400.1447570.088*
C70.0352 (6)0.3630 (4)0.1930 (2)0.0787 (9)
H70.2020140.3816640.1797500.094*
C80.0618 (11)0.5022 (5)0.2504 (3)0.1252 (17)
H8A0.2228670.4820280.2668440.188*
H8B0.0300540.5161700.3088680.188*
H8C0.0534930.5955770.2115710.188*
C90.1914 (6)0.1824 (4)0.3011 (2)0.0663 (7)
H90.3294430.2403870.2956430.080*
C100.1902 (5)0.0462 (3)0.36642 (19)0.0594 (6)
C110.0015 (5)0.0557 (4)0.3716 (2)0.0669 (7)
H110.1328640.0401920.3333880.080*
C120.0170 (6)0.1810 (4)0.4350 (2)0.0814 (9)
H120.1062590.2524540.4392710.098*
C130.2142 (6)0.1989 (4)0.4910 (3)0.0869 (10)
H130.2276040.2819270.5346120.104*
C140.3901 (6)0.0935 (5)0.4818 (3)0.0886 (11)
H140.5244190.1070660.5203630.106*
Cl10.4936 (2)0.31179 (16)0.18694 (8)0.1191 (5)
N10.0140 (5)0.2236 (3)0.25224 (19)0.0705 (7)
N20.3844 (4)0.0290 (4)0.42131 (19)0.0780 (7)
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
C10.0727 (17)0.0552 (16)0.0689 (16)0.0081 (14)0.0095 (13)0.0102 (13)
C20.0786 (19)0.0687 (19)0.089 (2)0.0115 (17)0.0045 (17)0.0194 (17)
C30.083 (2)0.084 (2)0.078 (2)0.0062 (18)0.0061 (16)0.0253 (18)
C40.0718 (19)0.079 (2)0.0778 (19)0.0078 (17)0.0008 (14)0.0155 (19)
C50.0637 (18)0.085 (2)0.092 (2)0.0029 (16)0.0035 (16)0.0198 (19)
C60.0710 (18)0.073 (2)0.077 (2)0.0041 (16)0.0151 (15)0.0194 (16)
C70.098 (2)0.0607 (19)0.078 (2)0.0026 (16)0.0048 (18)0.0099 (16)
C80.207 (5)0.075 (3)0.094 (3)0.023 (3)0.015 (3)0.006 (2)
C90.0741 (18)0.0676 (18)0.0571 (16)0.0094 (14)0.0010 (14)0.0044 (14)
C100.0662 (16)0.0598 (15)0.0521 (14)0.0023 (14)0.0023 (12)0.0068 (13)
C110.0653 (16)0.0674 (18)0.0679 (18)0.0005 (15)0.0007 (13)0.0045 (14)
C120.086 (2)0.0700 (19)0.088 (2)0.0046 (18)0.0147 (17)0.0074 (19)
C130.088 (2)0.083 (2)0.090 (2)0.013 (2)0.0135 (18)0.026 (2)
C140.077 (2)0.112 (3)0.077 (2)0.013 (2)0.0066 (16)0.025 (2)
Cl10.1121 (8)0.1502 (11)0.0944 (7)0.0124 (7)0.0247 (5)0.0234 (7)
N10.0841 (17)0.0614 (14)0.0660 (16)0.0001 (13)0.0015 (13)0.0072 (12)
N20.0670 (15)0.0952 (19)0.0717 (16)0.0036 (14)0.0064 (12)0.0052 (16)
Geometric parameters (Å, º) top
C1—C21.380 (4)C8—H8B0.9600
C1—C61.380 (4)C8—H8C0.9600
C1—C71.516 (4)C9—H90.9300
C2—H20.9300C9—C101.467 (4)
C2—C31.374 (5)C9—N11.253 (4)
C3—H30.9300C10—C111.381 (4)
C3—C41.359 (5)C10—N21.336 (3)
C4—C51.366 (4)C11—H110.9300
C4—Cl11.737 (3)C11—C121.380 (5)
C5—H50.9300C12—H120.9300
C5—C61.386 (5)C12—C131.359 (4)
C6—H60.9300C13—H130.9300
C7—H70.9800C13—C141.350 (5)
C7—C81.531 (6)C14—H140.9300
C7—N11.446 (4)C14—N21.334 (5)
C8—H8A0.9600
C2—C1—C7120.1 (3)C7—C8—H8B109.5
C6—C1—C2118.0 (3)C7—C8—H8C109.5
C6—C1—C7121.9 (3)H8A—C8—H8B109.5
C1—C2—H2119.2H8A—C8—H8C109.5
C3—C2—C1121.7 (3)H8B—C8—H8C109.5
C3—C2—H2119.2C10—C9—H9118.7
C2—C3—H3120.5N1—C9—H9118.7
C4—C3—C2119.0 (3)N1—C9—C10122.7 (3)
C4—C3—H3120.5C11—C10—C9122.6 (3)
C3—C4—C5121.3 (3)N2—C10—C9115.0 (3)
C3—C4—Cl1118.9 (3)N2—C10—C11122.4 (3)
C5—C4—Cl1119.8 (3)C10—C11—H11120.8
C4—C5—H5120.4C12—C11—C10118.4 (3)
C4—C5—C6119.3 (3)C12—C11—H11120.8
C6—C5—H5120.4C11—C12—H12120.3
C1—C6—C5120.7 (3)C13—C12—C11119.4 (3)
C1—C6—H6119.6C13—C12—H12120.3
C5—C6—H6119.6C12—C13—H13120.8
C1—C7—H7109.0C14—C13—C12118.5 (3)
C1—C7—C8110.6 (3)C14—C13—H13120.8
C8—C7—H7109.0C13—C14—H14117.8
N1—C7—C1110.9 (3)N2—C14—C13124.5 (3)
N1—C7—H7109.0N2—C14—H14117.8
N1—C7—C8108.2 (3)C9—N1—C7117.4 (3)
C7—C8—H8A109.5C14—N2—C10116.9 (3)
C1—C2—C3—C40.3 (5)C8—C7—N1—C996.1 (4)
C1—C7—N1—C9142.4 (3)C9—C10—C11—C12179.7 (3)
C2—C1—C6—C50.6 (5)C9—C10—N2—C14179.9 (3)
C2—C1—C7—C891.5 (4)C10—C9—N1—C7177.9 (3)
C2—C1—C7—N1148.5 (3)C10—C11—C12—C131.0 (5)
C2—C3—C4—C50.9 (5)C11—C10—N2—C140.6 (5)
C2—C3—C4—Cl1179.6 (3)C11—C12—C13—C140.7 (5)
C3—C4—C5—C60.8 (5)C12—C13—C14—N20.2 (6)
C4—C5—C6—C10.0 (5)C13—C14—N2—C100.2 (5)
C6—C1—C2—C30.4 (5)Cl1—C4—C5—C6179.7 (3)
C6—C1—C7—C886.6 (4)N1—C9—C10—C116.7 (4)
C6—C1—C7—N133.4 (4)N1—C9—C10—N2172.7 (3)
C7—C1—C2—C3177.7 (3)N2—C10—C11—C121.0 (4)
C7—C1—C6—C5177.5 (3)
cis-Dichlorido{(S)-(-)-1-(4-chlorophenyl)-N-[(pyridin-2-yl)methylidene]ethan-1-amine}palladium(II) complex (imilpd_1_mo) top
Crystal data top
[PdCl2(C14H13ClN2)]Dx = 1.851 Mg m3
Mr = 422.01Mo Kα radiation, λ = 0.71073 Å
Orthorhombic, P212121Cell parameters from 3623 reflections
a = 10.2429 (9) Åθ = 3.6–26.7°
b = 11.4188 (14) ŵ = 1.74 mm1
c = 12.9466 (17) ÅT = 150 K
V = 1514.3 (3) Å3Plate, translucent orange
Z = 40.62 × 0.24 × 0.12 mm
F(000) = 832
Data collection top
Xcalibur, Atlas, Gemini
diffractometer
2665 reflections with I > 2σ(I)
Detector resolution: 10.5564 pixels mm-1Rint = 0.064
ω scansθmax = 27.1°, θmin = 3.1°
Absorption correction: analytical
[CrysAlisPro (Rigaku OD, 2015) using a multifaceted crystal model based on expressions derived by Clark & Reid (1995)]
h = 1313
Tmin = 0.870, Tmax = 0.966k = 1414
16724 measured reflectionsl = 1616
3328 independent reflections
Refinement top
Refinement on F2Hydrogen site location: inferred from neighbouring sites
Least-squares matrix: fullH-atom parameters constrained
R[F2 > 2σ(F2)] = 0.046 w = 1/[σ2(Fo2) + 8.4403P]
where P = (Fo2 + 2Fc2)/3
wR(F2) = 0.092(Δ/σ)max = 0.001
S = 1.07Δρmax = 1.38 e Å3
3328 reflectionsΔρmin = 0.67 e Å3
182 parametersAbsolute structure: Flack x determined using 1011 quotients [(I+)-(I-)]/[(I+)+(I-)] (Parsons et al., 2013)
0 restraintsAbsolute structure parameter: 0.06 (3)
Primary atom site location: iterative
Special details top

Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/Ueq
C10.4453 (10)0.5307 (9)0.7078 (7)0.033 (2)
C20.4209 (10)0.4661 (9)0.7983 (7)0.033 (2)
H20.4836920.4107190.8213430.040*
C30.3073 (10)0.4815 (9)0.8542 (7)0.033 (2)
H30.2918810.4372100.9151230.039*
C40.2163 (9)0.5625 (9)0.8203 (8)0.032 (2)
C50.2377 (9)0.6267 (9)0.7300 (8)0.038 (3)
H50.1744240.6813220.7064400.046*
C60.3530 (10)0.6095 (9)0.6748 (8)0.037 (3)
H60.3679480.6530670.6133960.044*
C70.5713 (10)0.5176 (8)0.6472 (8)0.031 (2)
H70.5498190.5337390.5731980.038*
C80.6299 (10)0.3943 (9)0.6513 (9)0.039 (3)
H8A0.7067300.3905860.6063620.059*
H8B0.5648120.3372680.6278340.059*
H8C0.6555730.3760580.7224530.059*
C90.6734 (9)0.6515 (8)0.7680 (6)0.0279 (17)
H90.6058940.6349920.8161550.033*
C100.7778 (9)0.7307 (9)0.7950 (8)0.031 (2)
C110.7857 (10)0.7891 (9)0.8896 (8)0.040 (3)
H110.7223660.7756860.9419510.049*
C120.8873 (9)0.8666 (9)0.9058 (10)0.044 (3)
H120.8959170.9066790.9697300.053*
C130.9756 (11)0.8846 (9)0.8274 (9)0.042 (3)
H131.0447410.9390190.8365510.050*
C140.9644 (9)0.8235 (8)0.7345 (8)0.034 (2)
H141.0270100.8360220.6815290.041*
Cl10.7729 (3)0.5439 (3)0.4479 (2)0.0410 (6)
Cl21.0184 (2)0.7101 (2)0.51194 (19)0.0354 (6)
Cl30.0736 (2)0.5835 (2)0.8907 (2)0.0430 (7)
N10.6727 (8)0.6036 (6)0.6781 (5)0.0281 (16)
N20.8678 (7)0.7481 (6)0.7191 (6)0.0265 (17)
Pd10.82980 (7)0.65153 (6)0.59030 (5)0.02722 (17)
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
C10.034 (6)0.038 (6)0.028 (5)0.004 (4)0.008 (4)0.004 (4)
C20.027 (5)0.044 (6)0.028 (5)0.002 (5)0.003 (4)0.003 (5)
C30.030 (6)0.045 (6)0.023 (5)0.010 (5)0.002 (4)0.002 (4)
C40.024 (5)0.039 (6)0.033 (5)0.004 (4)0.003 (4)0.001 (5)
C50.028 (5)0.046 (7)0.042 (6)0.000 (4)0.004 (4)0.016 (5)
C60.034 (6)0.040 (6)0.036 (5)0.005 (5)0.003 (5)0.007 (4)
C70.031 (5)0.032 (6)0.031 (5)0.005 (4)0.003 (4)0.000 (4)
C80.035 (6)0.035 (6)0.048 (7)0.003 (5)0.006 (5)0.003 (5)
C90.021 (4)0.035 (5)0.027 (4)0.008 (5)0.000 (4)0.002 (4)
C100.025 (5)0.034 (6)0.036 (6)0.007 (4)0.000 (4)0.002 (5)
C110.037 (6)0.043 (6)0.042 (7)0.002 (5)0.006 (5)0.009 (5)
C120.044 (6)0.044 (6)0.043 (6)0.006 (5)0.003 (6)0.013 (7)
C130.033 (6)0.035 (6)0.058 (7)0.003 (5)0.009 (5)0.003 (5)
C140.026 (5)0.029 (6)0.047 (6)0.008 (4)0.005 (4)0.006 (5)
Cl10.0353 (13)0.0519 (17)0.0358 (13)0.0044 (12)0.0051 (11)0.0131 (12)
Cl20.0282 (13)0.0432 (15)0.0350 (13)0.0025 (11)0.0019 (10)0.0007 (11)
Cl30.0304 (13)0.0540 (17)0.0447 (17)0.0026 (12)0.0069 (12)0.0025 (13)
N10.027 (4)0.032 (4)0.025 (4)0.009 (4)0.006 (4)0.002 (3)
N20.028 (4)0.021 (4)0.031 (4)0.007 (3)0.000 (3)0.001 (3)
Pd10.0225 (3)0.0317 (3)0.0274 (3)0.0018 (3)0.0002 (3)0.0006 (3)
Geometric parameters (Å, º) top
C1—C21.407 (14)C9—H90.9500
C1—C61.374 (14)C9—C101.443 (13)
C1—C71.518 (14)C9—N11.287 (10)
C2—H20.9500C10—C111.397 (13)
C2—C31.382 (13)C10—N21.362 (12)
C3—H30.9500C11—H110.9500
C3—C41.385 (13)C11—C121.382 (14)
C4—C51.398 (13)C12—H120.9500
C4—Cl31.739 (10)C12—C131.375 (15)
C5—H50.9500C13—H130.9500
C5—C61.394 (14)C13—C141.395 (14)
C6—H60.9500C14—H140.9500
C7—H71.0000C14—N21.327 (12)
C7—C81.531 (13)Cl1—Pd12.291 (3)
C7—N11.484 (12)Cl2—Pd12.282 (3)
C8—H8A0.9800N1—Pd12.045 (8)
C8—H8B0.9800N2—Pd12.036 (8)
C8—H8C0.9800
C2—C1—C7122.0 (9)C10—C9—H9120.3
C6—C1—C2118.7 (10)N1—C9—H9120.3
C6—C1—C7119.3 (9)N1—C9—C10119.3 (9)
C1—C2—H2119.4C11—C10—C9123.6 (9)
C3—C2—C1121.3 (10)N2—C10—C9114.7 (8)
C3—C2—H2119.4N2—C10—C11121.6 (9)
C2—C3—H3120.5C10—C11—H11120.6
C2—C3—C4119.1 (9)C12—C11—C10118.8 (10)
C4—C3—H3120.5C12—C11—H11120.6
C3—C4—C5120.6 (9)C11—C12—H12120.7
C3—C4—Cl3119.5 (8)C13—C12—C11118.6 (11)
C5—C4—Cl3119.9 (8)C13—C12—H12120.7
C4—C5—H5120.4C12—C13—H13119.7
C6—C5—C4119.2 (9)C12—C13—C14120.5 (10)
C6—C5—H5120.4C14—C13—H13119.7
C1—C6—C5121.1 (9)C13—C14—H14119.5
C1—C6—H6119.5N2—C14—C13121.0 (9)
C5—C6—H6119.5N2—C14—H14119.5
C1—C7—H7106.8C7—N1—Pd1125.3 (6)
C1—C7—C8114.0 (8)C9—N1—C7122.0 (8)
C8—C7—H7106.8C9—N1—Pd1112.6 (7)
N1—C7—C1112.9 (8)C10—N2—Pd1112.5 (6)
N1—C7—H7106.8C14—N2—C10119.4 (8)
N1—C7—C8109.0 (8)C14—N2—Pd1128.1 (7)
C7—C8—H8A109.5Cl2—Pd1—Cl190.85 (9)
C7—C8—H8B109.5N1—Pd1—Cl195.9 (2)
C7—C8—H8C109.5N1—Pd1—Cl2172.6 (2)
H8A—C8—H8B109.5N2—Pd1—Cl1176.3 (2)
H8A—C8—H8C109.5N2—Pd1—Cl292.5 (2)
H8B—C8—H8C109.5N2—Pd1—N180.8 (3)
C1—C2—C3—C40.1 (15)C9—C10—C11—C12177.5 (9)
C1—C7—N1—C924.3 (12)C9—C10—N2—C14177.0 (8)
C1—C7—N1—Pd1159.7 (6)C9—C10—N2—Pd11.8 (10)
C2—C1—C6—C50.7 (15)C10—C9—N1—C7177.4 (8)
C2—C1—C7—C832.0 (13)C10—C9—N1—Pd10.9 (10)
C2—C1—C7—N193.0 (11)C10—C11—C12—C130.9 (15)
C2—C3—C4—C50.9 (15)C11—C10—N2—C141.0 (13)
C2—C3—C4—Cl3179.5 (7)C11—C10—N2—Pd1179.8 (7)
C3—C4—C5—C60.9 (15)C11—C12—C13—C141.6 (16)
C4—C5—C6—C10.1 (16)C12—C13—C14—N20.9 (15)
C6—C1—C2—C30.7 (15)C13—C14—N2—C100.4 (13)
C6—C1—C7—C8149.2 (10)C13—C14—N2—Pd1178.9 (7)
C6—C1—C7—N185.8 (11)Cl3—C4—C5—C6179.5 (8)
C7—C1—C2—C3178.1 (9)N1—C9—C10—C11178.5 (9)
C7—C1—C6—C5178.1 (9)N1—C9—C10—N20.6 (13)
C8—C7—N1—C9103.4 (10)N2—C10—C11—C120.3 (15)
C8—C7—N1—Pd172.6 (9)
Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
C2—H2···Cl2i0.952.833.4765 (5)126
C6—H6···Cl2ii0.952.733.5996 (5)153
C7—H7···Cl11.002.803.318 (10)113
C8—H8A···Cl10.982.783.464 (11)127
C14—H14···Cl20.952.633.207 (11)120
Symmetry codes: (i) x+3/2, y+1, z+1/2; (ii) x1/2, y+3/2, z+1.
 

Acknowledgements

We thank the Consejo Nacional de Humanidades, Ciencias y Tecnologías (Conahcyt) and the Vicerrectoría de Investigación y Estudios de Posgrado (VIEP-BUAP) for financial support.

Funding information

Funding for this research was provided by: Consejo Nacional de Ciencia y Tecnologa; Vicerrectora de Investigacin y Estudios de Posgrado, Benemrita Universidad Autnoma de Puebla.

References

Return to citationAnzaldo Olivares, B., Moreno, O. P., Téllez, G. H., Rosas, E. R., Bustamante, F. J. M., Castro Sánchez, M. E., Sharma, P., Mendoza, A. & Pérez, R. G. (2019). Opt. Mater. 94, 337–347.  Web of Science CrossRef CAS Google Scholar
Return to citationBastero, A., Claver, C., Ruiz, A., Castillón, S., Daura, E., Bo, C. & Zangrando, E. (2004). Chem. A Eur. J. 10, 3747–3760.  Web of Science CSD CrossRef CAS Google Scholar
Return to citationBastero, A., Ruiz, A., Claver, C., Milani, B. & Zangrando, E. (2002). Organometallics 21, 5820–5829.  Web of Science CSD CrossRef CAS Google Scholar
Return to citationBourhis, L. J., Dolomanov, O. V., Gildea, R. J., Howard, J. A. K. & Puschmann, H. (2015). Acta Cryst. A71, 59–75.  Web of Science CrossRef IUCr Journals Google Scholar
Return to citationBugarčić, Ž. D., Bogojeski, J. & van Eldik, R. (2015). Coord. Chem. Rev. 292, 91–106.  Google Scholar
Return to citationChen, C., Pflüger, P. M., Chen, P. & Liu, G. (2019). Angew. Chem. Int. Ed. 58, 2392–2396.  Web of Science CSD CrossRef CAS Google Scholar
Return to citationClark, R. C. & Reid, J. S. (1995). Acta Cryst. A51, 887–897.  CrossRef CAS Web of Science IUCr Journals Google Scholar
Return to citationDalia, S. A., Afsan, F., Hossain, M. S., Khan, M. N., Zakaria, C., Zahan, M. E. & Ali, M. (2018). J. Chem. Stud. 6, 2859–2867.  Google Scholar
Return to citationDe Crisci, A. G., Chung, K., Oliver, A. G., Solis-Ibarra, D. & Waymouth, R. M. (2013). Organometallics 32, 2257–2266.  Web of Science CSD CrossRef CAS Google Scholar
Return to citationDodd, D. W., Toews, H. E., Carneiro, F., d, S., Jennings, M. C. & Jones, N. D. (2006). Inorg. Chim. Acta 359, 2850–2858.  Web of Science CSD CrossRef CAS Google Scholar
Return to citationDolomanov, O. V., Bourhis, L. J., Gildea, R. J., Howard, J. A. K. & Puschmann, H. (2009). J. Appl. Cryst. 42, 339–341.  Web of Science CrossRef CAS IUCr Journals Google Scholar
Return to citationEseola, A. O., Geibig, D., Görls, H., Sun, W.-H., Hao, X., Woods, J. A. O. & Plass, W. (2014). J. Organomet. Chem. 754, 39–50.  Web of Science CSD CrossRef CAS Google Scholar
Return to citationFabbrizzi, L. (2020). J. Org. Chem. 85, 12212–12226.  Web of Science CrossRef CAS PubMed Google Scholar
Return to citationGroom, C. R., Bruno, I. J., Lightfoot, M. P. & Ward, S. C. (2016). Acta Cryst. B72, 171–179.  Web of Science CrossRef IUCr Journals Google Scholar
Return to citationGuo, B., Yan, X., Wang, Z., Shen, C., Chen, W., Cen, S., Peng, Q. & Zhang, Z. (2025). J. Am. Chem. Soc. 147, 12614–12626.  Web of Science CSD CrossRef CAS PubMed Google Scholar
Return to citationGutiérrez, D., Bernès, S., Hernández, G., Portillo, O., Moreno, G. E., Sharma, M., Sharma, P. & Gutiérrez, R. (2015). J. Coord. Chem. 68, 3805–3813.  Google Scholar
Return to citationHernández Téllez, G., Reyes-Avendaño, J. A., Bravo-Arredondo, J. M., Moreno Morales, G. E., Sharma, P., Villamizar, C. P., Mendoza, A. & Anzaldo, B. (2025). ACS Omega 10, 51170–51185.  Web of Science PubMed Google Scholar
Return to citationMandal, P. & Pratihar, J. L. (2023). Rev. Inorg. Chem. 43, 415–436.  Web of Science CrossRef CAS Google Scholar
Return to citationMishnev, A., Iovel, I., Popelis, J., Vosekalna, I. & Lukevics, E. (2000). J. Organomet. Chem. 608, 1–5.  Web of Science CSD CrossRef CAS Google Scholar
Return to citationNgcobo, N. L., Akiri, S. O., Ogweno, A. O. & Ojwach, S. O. (2021). Polyhedron 203, 115243–115243.  Web of Science CSD CrossRef CAS Google Scholar
Return to citationParsons, S., Flack, H. D. & Wagner, T. (2013). Acta Cryst. B69, 249–259.  Web of Science CSD CrossRef CAS IUCr Journals Google Scholar
Return to citationQi, X., Chen, C., Hou, C., Fu, L., Chen, P. & Liu, G. (2018). J. Am. Chem. Soc. 140, 7415–7419.  Web of Science CSD CrossRef CAS PubMed Google Scholar
Return to citationRigaku OD (2015). CrysAlis PRO. Rigaku Oxford Diffraction Ltd, Yarnton, England.  Google Scholar
Return to citationSheldrick, G. M. (2008). Acta Cryst. A64, 112–122.  Web of Science CrossRef CAS IUCr Journals Google Scholar
Return to citationSheldrick, G. M. (2015). Acta Cryst. C71, 3–8.  Web of Science CrossRef IUCr Journals Google Scholar
Return to citationSvensson, M., Bremberg, U., Hallman, K., Csöregh, I. & Moberg, C. (1999). Organometallics 18, 4900–4907.  Web of Science CSD CrossRef CAS Google Scholar
Return to citationTakeda, C., Nakane, D. & Akitsu, T. (2023). Molecules 28, 7990–7990.  Web of Science CrossRef CAS PubMed Google Scholar
Return to citationTang, Y., Zeng, Y., Hu, Q., Huang, F., Jin, L., Mo, W., Sun, N., Hu, B., Shen, Z., Hu, X. & Sun, W.-H. (2016). Adv. Synth. Catal. 358, 2642–2651.  Web of Science CSD CrossRef CAS Google Scholar
Return to citationTian, B., Chen, P., Leng, X. & Liu, G. (2021). Nat. Catal. 4, 172–179.  Web of Science CSD CrossRef CAS Google Scholar

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