research communications
Crystal structures and Hirshfeld surface comparison of fumarate and bromide salts of the etoxazole metabolite designated R7 (aminium ions)
aDepartment of Physical Sciences, Amrita School of Engineering, Amrita Vishwa Vidyapeetham, Bengaluru-560 035, India, bDepartment of Applied Sciences, New Horizon College of Engineering, Bengaluru-560 103, India, cDepartment of Studies in Chemistry, University of Mysore, Manasagangotri, Mysuru-570 006, India, and dDepartment of Chemistry, University of Kentucky, Lexington, KY, 40506-0055, USA
*Correspondence e-mail: [email protected]
Etoxazole (C21H23F2NO2) is a fluorinated insecticide/acaricide that acts as an inhibitor of chitin biosynthesis. Its degradation products include several persistent environmental contaminants, including a metabolite designated ‘R7’ (C19H25F2NO3), which has a readily protonated amine group, to give the R7H+ cation, namely, 2-azaniumyl-2-(4-tert-butyl-2-ethoxyphenyl)ethyl 2,6-difluorobenzoate. This paper reports the crystal structures of two salts of R7H+: the bromide (I: C21H26F2NO3+·Br−) and the 3-carboxyprop-2-enoate (hereafter fumarate) (II: C21H26F2NO3+·C4H3O4−). Although the R7H+ cations in I and II are chemically identical, the salts crystallize in substantially different structures. Crystals of I are tetragonal, space-group type P421c, whereas those of II are monoclinic, space-group type P21/n, each containing one cation–anion pair in their respective asymmetric units (Z′ = 1). The R7H+ cation in both structures feature a central 2-azaniumyl linker connecting 4-tert-butyl-2-ethoxyphenyl and 2,6-difluorobenzoate rings. Cation conformation is primarily governed by different torsional degrees of freedom, leading to distinct overall conformations. The crystal packing in I is driven by N—H⋯Br hydrogen bonds, π–π and C—H⋯π interactions, which arrange the cations into columns parallel to the crystallographic c-axis. In contrast, the packing in II consists of N—H⋯O hydrogen bonds to adjacent fumarate anions, forming extended hydrogen-bonded chains. The fumarate anions are sandwiched between R7H+ cations, placing the fumarate double bond between aromatic rings. Hirshfeld-surface analysis shows that intermolecular contacts in both structures are dominated by interactions involving hydrogen (93.4% in I, 92.2% in II).
1. Chemical context
Etoxazole [C21H23F2NO2, systematic name 4-(4-tert-butyl-2-ethoxyphenyl)-2-(2,6-difluorophenyl)-4,5-dihydro-1,3-oxazole], is an oxazoline-based fluorinated insecticide/acaricide, which acts as an inhibitor of chitin biosynthesis. It was developed as a new-generation pesticide to address the growing resistance of spider mites to traditional acaricides, and was selected for development in 1990, achieving registration in 1998 (Suzuki et al., 2002
). This classification reflects its superior bioactivity and novel target compared to established chitin synthesis inhibitors, pyrethroids, and organophosphate (Li et al., 2014
) and has been deployed globally since 1998 (Park et al., 2020
). The synthesis and activity of various 2,4-diphenyl-1,3-oxazolines with acaricidal/insecticidal properties were reported by Suzuki et al. (2002
). Metabolic studies of etoxazole by Sun et al. (2019
), Macar et al. (2022
) and others, have revealed several distinct metabolites resulting from oxidative degradation, especially of its oxazoline ring. These environmental contaminants have been found in plants, earthworms, and soil (Sun et al., 2019
), as well as in rats (Yilmaz et al., 2017
). In view of the agricultural and environmental significance of etoxazole and its metabolites, we have recently reported the crystal structures of etoxazole itself (Sowbhagya et al., 2025a
), as well as the etoxazole metabolites designated R13 (Mohan Kumar et al., 2024
) and R4 (Sowbhagya et al., 2025b
). Another related degradation product of etoxazole is the R7 metabolite [C19H25F2NO3, systematic name: 2-amino-2-(4-tert-butyl-2-ethoxyphenyl)ethyl 2,6-difluorobenzoate], which has an amino group that readily protonates to form an aminium ion, R7H+. This paper reports crystal structures of the bromide (I: C21H26BrF2NO3) and fumarate (II: C25H29F2NO7) salts of R7H+.
2. Structural commentary
In spite of having chemically identical cations, the crystal structures of I and II are substantially different. Crystals of I are tetragonal, space-group type P21c, whereas those of II are monoclinic, space-group type P21/n, though both have one molecule in their respective asymmetric units (Z′ = 1).
The R7H+ cation in each salt is comprised of a central 2-azaniumyl (CH2CHNH3+) linker flanked by 4-tert-butyl-2-ethoxyphenyl and 2,6-difluorobenzoate substituted rings, as shown in Figs. 1
and 2
. No unusual bond lengths or angles are found in either structure. The conformations of the R7H+ cations are governed primarily by torsional about the C3—C4, C2—C3, O1—C2, and C1—C16 bonds. These are shown qualitatively in a least-squares overlay plot (Fig. 3
) and quantified in Table 1
. In the central 2-azaniumyl moiety, atom C3 is stereogenic , but both structures are strictly racemic (I is non-centrosymmetric but possesses a c-glide). The chosen asymmetric units for I and II both had C3 assigned as R. A least-squares fit overlay of all 27 non-H cation atoms, however, yields a smaller r.m.s. deviation (1.1328 Å vs 1.5544 Å) when one structure is inverted relative to the other. Thus, the R enantiomer of R7H+ in I has a better overall fit to the S enantiomer of II and vice versa, which emphasizes the distinct conformations of the two structures.
| ||||||||||||||||||||||||||||||||||||||
| Figure 1 An ellipsoid plot (50% probability) of I. Hydrogen atoms are drawn as small arbitrary circles. |
| Figure 2 An ellipsoid plot (50% probability) of II. Hydrogen atoms are drawn as small arbitrary circles. |
| Figure 3 A least-squares-fit overlay of R7H+ cations from I and II. |
3. Supramolecular features
In I, the only conventional hydrogen-bond donor is the ammonium nitrogen atom, N1, which forms hydrogen bonds to three symmetry-related Br− anions. These are: N1—H1A⋯Br1i, N1—H1B⋯Br1ii, and N1—H1C⋯Br1 (symmcodes and distances are given in Table 2
). In addition, the contact N1—H1A⋯F1ii and three weak contacts with C—H as donor are flagged as ‘potential hydrogen bonds' by SHELXL (details in Table 2
). There are also π–π and C—H⋯π contacts in I. Difluorobenzene ring C16–C21 π-stacks with its counterpart at (1 − x, 2 − y, z) DCg⋯Cg = 3.814 (2) Å, while ring C4–C9 is in close contact with H18ii, DCg⋯H = 2.73 Å. Each type of interaction is shown in Fig. 4
a. In combination, these contacts connect the R7H+ cations into columns parallel to the c-axis, which pack in a square array to give the overall tetragonal packing symmetry, as shown in Fig. 4
b.
|
| Figure 4 (a) A partial packing plot of I. Hydrogen bonds are shown as thick dotted lines, N—H⋯F contacts as open dashed lines, π–π stacked rings by thin dashed lines, and C—H⋯π contacts as dotted lines. (b) A view down the crystallographic c-axis showing the fourfold symmetry. |
In II, the R7H+ ammonium group also forms three conventional hydrogen bonds. Two of these are to O4 of adjacent fumarate anions, namely N1—H1C⋯O4 and N1—H1A⋯O4i (distances, angles and symmcodes are given in Table 3
). The remaining hydrogen bond is intramolecular, N1—H1B⋯O2, within the R7H+ cation. Atom H1B is also in close contact with a symmetry-related fumarate O7, i.e., N1—H1B⋯O7ii, but the angle is small (111.5°, Table 3
). In addition, the fumarate anions form extended O6—H6A⋯O5iv hydrogen-bonded chains. As in I, there are also weaker contacts with C—H as donor, which are also given in Table 3
. There is no π–π stacking of rings in I, but the central double bond of the fumarate anion sits sandwiched between the planes of ring C4–C9 and C16–C19i at a distances of 3.512 and 3.636, Å, respectively between ring and double-bond centroids. These interactions are shown in Fig. 5
.
|
| Figure 5 A partial packing plot of II. Hydrogen bonds are shown as thick dotted lines and overlap of the fumarate double bond with aromatic rings as thin dashed lines. |
A Hirshfeld surface analysis using CrystalExplorer (Spackman et al., 2021
) shows that the most important intermolecular contacts for the R7H+ cation in I and II involve hydrogen (93.4% in I, 92.2% in II), with over 50% being H⋯H in both structures. These are summarized pairwise for ease of comparison in Fig. 6
.
| Figure 6 Hirshfeld-surface fingerprint plots of the most abundant types of atom-atom contacts in I and II. (a),(b) H⋯H contacts, (c),(d) H⋯F, (e),(f) H⋯C, (g),(h) H⋯O/Br and H⋯O contacts. For ease of comparison of the hydrogen-bonding contacts of the ammonium cation, panel (g) is a composite of H⋯O and H⋯Br contacts. |
4. Database survey
A search of the Cambridge Structural Database (CSD v6.0, April 2025: Groom et al., 2016
) using a search fragment consisting of the R7 backbone but with the tert-butyl, ethoxy, and fluoride substituents set to ‘any group' and the carbon–nitrogen and carbonyl–group bonds set to ‘any type' returned 64 hits. Of these, none includes either unsubstituted amino (–NH2) or ammonium (–NH3+) groups. Furthermore, only three structures include fluorine substituents: CSD refcodes AFABUE (Maligres et al., 2002
) and CIBKUT (Seiler et al., 1999
) have –CF3 groups, while LEZRIU (Xing et al., 2018
) has a single fluorine atom at the 4-position of the benzoate ring, but otherwise have little in common with R7. Other related structures include the parent molecule etoxazole (DULGUQ: Sowbhagya et al., 2025a
) and its R4 (ULOVAW: Sowbhagya et al., 2025b
) and R13 (UGUQUM: Mohan Kumar et al., 2024
) metabolites.
5. Synthesis and crystallization
Solutions of the etoxazole metabolite R7 (100 mg, 0.265 mmol) in methanol (5 ml) were mixed with either equimolar quantities of a methanolic solution of fumaric acid (31 mg) or 2 ml of HBr (48% aqueous solution) in 10 ml of methanol and stirred for an hour at 313 K. The mixtures were set aside for slow evaporation for 24 h. The resulting crystals, suitable for X-ray were collected by filtration and air dried.
6. Refinement
Crystal data, data collection and structure details are summarized in Table 4
. All hydrogen atoms were found in difference-Fourier maps, but subsequently included in the refinement using riding models. Carbon-bound hydrogen atoms were affixed with constrained distances set to 0.95 Å (Csp2—H), 0.98 Å (RCH3), 0.99 Å (R2CH2) and 1.00 Å (R3CH). Hydrogen atoms bound to nitrogen and oxygen used riding models that allowed their bond distances to refine. Uiso(H) parameters were set to values of either 1.2Ueq or 1.5Ueq (RCH3, RNH3, OH) of the attached atom.
|
Supporting information
contains datablocks I, II, global. DOI: https://doi.org/10.1107/S2056989026002197/nx2032sup1.cif
Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S2056989026002197/nx2032Isup2.hkl
Structure factors: contains datablock II. DOI: https://doi.org/10.1107/S2056989026002197/nx2032IIsup3.hkl
Supporting information file. DOI: https://doi.org/10.1107/S2056989026002197/nx2032Isup4.cml
Supporting information file. DOI: https://doi.org/10.1107/S2056989026002197/nx2032IIsup5.cml
| C21H26F2NO3+·Br− | Dx = 1.455 Mg m−3 |
| Mr = 458.34 | Mo Kα radiation, λ = 0.71073 Å |
| Tetragonal, P421c | Cell parameters from 9610 reflections |
| a = 15.2984 (2) Å | θ = 2.6–27.5° |
| c = 17.8818 (3) Å | µ = 2.00 mm−1 |
| V = 4185.07 (13) Å3 | T = 100 K |
| Z = 8 | Irregular block, colourless |
| F(000) = 1888 | 0.21 × 0.19 × 0.18 mm |
| Bruker D8 Venture dual source diffractometer | 4795 independent reflections |
| Radiation source: microsource | 4496 reflections with I > 2σ(I) |
| Detector resolution: 7.41 pixels mm-1 | Rint = 0.049 |
| φ and ω scans | θmax = 27.5°, θmin = 1.9° |
| Absorption correction: multi-scan (SADABS; Krause et al., 2015) | h = −19→19 |
| Tmin = 0.830, Tmax = 0.928 | k = −19→16 |
| 75181 measured reflections | l = −23→23 |
| Refinement on F2 | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: difference Fourier map |
| R[F2 > 2σ(F2)] = 0.024 | H atoms treated by a mixture of independent and constrained refinement |
| wR(F2) = 0.058 | w = 1/[σ2(Fo2) + (0.0243P)2 + 2.4223P] where P = (Fo2 + 2Fc2)/3 |
| S = 1.03 | (Δ/σ)max = 0.002 |
| 4795 reflections | Δρmax = 0.80 e Å−3 |
| 259 parameters | Δρmin = −0.44 e Å−3 |
| 0 restraints | Absolute structure: Flack x determined using 1911 quotients [(I+)-(I-)]/[(I+)+(I-)] (Parsons et al., 2013) |
| Primary atom site location: structure-invariant direct methods | Absolute structure parameter: 0.018 (3) |
Experimental. The crystal was mounted using polyisobutene oil on the tip of a fine glass fibre, which was fastened in a copper mounting pin with electrical solder. It was placed directly into the cold gas stream of a liquid-nitrogen based cryostat (Hope, 1994; Parkin & Hope, 1998). Diffraction data were collected with the crystal at 100K. |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement progress was checked using Platon (Spek, 2020) and by an R-tensor (Parkin, 2000). The final model was further checked with the IUCr utility checkCIF. |
| x | y | z | Uiso*/Ueq | ||
| Br1 | 0.62255 (2) | 0.58962 (2) | 0.39254 (2) | 0.01946 (8) | |
| F1 | 0.57938 (12) | 0.78020 (12) | 0.58387 (9) | 0.0244 (4) | |
| F2 | 0.34194 (13) | 0.97753 (13) | 0.58768 (10) | 0.0315 (5) | |
| O1 | 0.46509 (15) | 0.79073 (13) | 0.47217 (11) | 0.0210 (5) | |
| O2 | 0.27044 (14) | 0.80263 (14) | 0.31527 (11) | 0.0218 (4) | |
| O3 | 0.4237 (2) | 0.93037 (16) | 0.45861 (13) | 0.0469 (8) | |
| N1 | 0.41590 (16) | 0.62168 (16) | 0.42530 (12) | 0.0179 (4) | |
| H1A | 0.3844 (11) | 0.5764 (10) | 0.4118 (9) | 0.027* | |
| H1B | 0.4117 (13) | 0.6290 (6) | 0.4739 (10) | 0.027* | |
| H1C | 0.4708 (12) | 0.6127 (8) | 0.4132 (9) | 0.027* | |
| C1 | 0.4477 (2) | 0.8717 (2) | 0.49735 (16) | 0.0212 (6) | |
| C2 | 0.45015 (19) | 0.77420 (19) | 0.39362 (18) | 0.0209 (6) | |
| H2A | 0.505536 | 0.756944 | 0.369078 | 0.025* | |
| H2B | 0.428066 | 0.827752 | 0.368948 | 0.025* | |
| C3 | 0.38341 (18) | 0.70115 (18) | 0.38652 (15) | 0.0173 (5) | |
| H3 | 0.328393 | 0.720397 | 0.411841 | 0.021* | |
| C4 | 0.36260 (19) | 0.68309 (19) | 0.30538 (15) | 0.0170 (6) | |
| C5 | 0.39957 (18) | 0.61581 (19) | 0.26437 (14) | 0.0188 (6) | |
| H5 | 0.441988 | 0.579018 | 0.287063 | 0.023* | |
| C6 | 0.3753 (2) | 0.60129 (19) | 0.19004 (15) | 0.0201 (6) | |
| H6 | 0.401034 | 0.554458 | 0.162943 | 0.024* | |
| C7 | 0.31381 (19) | 0.65487 (19) | 0.15526 (15) | 0.0170 (6) | |
| C8 | 0.27756 (19) | 0.7236 (2) | 0.19644 (16) | 0.0175 (6) | |
| H8 | 0.236174 | 0.761410 | 0.173554 | 0.021* | |
| C9 | 0.30155 (19) | 0.73723 (19) | 0.27069 (15) | 0.0171 (6) | |
| C10 | 0.1902 (2) | 0.8458 (2) | 0.29526 (18) | 0.0290 (7) | |
| H10A | 0.194533 | 0.867321 | 0.243186 | 0.035* | |
| H10B | 0.181494 | 0.896979 | 0.328314 | 0.035* | |
| C11 | 0.1127 (2) | 0.7860 (3) | 0.30182 (19) | 0.0391 (9) | |
| H11A | 0.058984 | 0.819086 | 0.292220 | 0.059* | |
| H11B | 0.110555 | 0.761248 | 0.352339 | 0.059* | |
| H11C | 0.117919 | 0.738644 | 0.265185 | 0.059* | |
| C12 | 0.2838 (2) | 0.64002 (19) | 0.07426 (15) | 0.0195 (6) | |
| C13 | 0.1847 (2) | 0.6239 (3) | 0.07394 (19) | 0.0356 (8) | |
| H13A | 0.165704 | 0.609215 | 0.023144 | 0.053* | |
| H13B | 0.154416 | 0.676820 | 0.090753 | 0.053* | |
| H13C | 0.170823 | 0.575431 | 0.107730 | 0.053* | |
| C14 | 0.3291 (3) | 0.5618 (2) | 0.03807 (17) | 0.0317 (8) | |
| H14A | 0.309098 | 0.555738 | −0.013747 | 0.048* | |
| H14B | 0.314701 | 0.508575 | 0.065992 | 0.048* | |
| H14C | 0.392483 | 0.570840 | 0.038724 | 0.048* | |
| C15 | 0.3045 (2) | 0.7211 (2) | 0.02736 (17) | 0.0266 (7) | |
| H15A | 0.284634 | 0.711835 | −0.024144 | 0.040* | |
| H15B | 0.367679 | 0.731538 | 0.027601 | 0.040* | |
| H15C | 0.274350 | 0.771924 | 0.048583 | 0.040* | |
| C16 | 0.45887 (19) | 0.87692 (19) | 0.58045 (16) | 0.0184 (6) | |
| C17 | 0.52045 (19) | 0.82971 (19) | 0.62108 (16) | 0.0197 (6) | |
| C18 | 0.5267 (2) | 0.8323 (2) | 0.69799 (16) | 0.0220 (6) | |
| H18 | 0.570311 | 0.799695 | 0.723517 | 0.026* | |
| C19 | 0.4672 (2) | 0.8839 (2) | 0.73735 (17) | 0.0244 (7) | |
| H19 | 0.469349 | 0.885533 | 0.790432 | 0.029* | |
| C20 | 0.4056 (2) | 0.9324 (2) | 0.69972 (17) | 0.0234 (6) | |
| H20 | 0.365103 | 0.967676 | 0.726479 | 0.028* | |
| C21 | 0.4032 (2) | 0.92928 (19) | 0.62289 (17) | 0.0220 (6) |
| U11 | U22 | U33 | U12 | U13 | U23 | |
| Br1 | 0.01987 (14) | 0.02421 (15) | 0.01431 (11) | 0.00078 (11) | 0.00101 (12) | 0.00146 (12) |
| F1 | 0.0237 (9) | 0.0264 (9) | 0.0230 (9) | 0.0065 (8) | −0.0018 (7) | −0.0009 (7) |
| F2 | 0.0326 (10) | 0.0308 (10) | 0.0312 (11) | 0.0145 (8) | −0.0093 (8) | −0.0051 (8) |
| O1 | 0.0334 (12) | 0.0155 (10) | 0.0140 (9) | −0.0006 (9) | −0.0079 (8) | −0.0011 (8) |
| O2 | 0.0258 (11) | 0.0241 (11) | 0.0154 (9) | 0.0063 (9) | −0.0050 (8) | −0.0046 (8) |
| O3 | 0.089 (2) | 0.0268 (13) | 0.0252 (11) | 0.0228 (14) | −0.0070 (14) | 0.003 (1) |
| N1 | 0.0205 (12) | 0.0193 (12) | 0.014 (1) | −0.0003 (12) | −0.0012 (9) | 0.0008 (9) |
| C1 | 0.0248 (15) | 0.0183 (14) | 0.0205 (14) | 0.0000 (13) | −0.0014 (11) | 0.0000 (12) |
| C2 | 0.0263 (15) | 0.0237 (14) | 0.0127 (11) | −0.0035 (11) | −0.0033 (13) | −0.0004 (13) |
| C3 | 0.0195 (13) | 0.0193 (13) | 0.0130 (12) | 0.0013 (11) | −0.0013 (12) | 0.0018 (11) |
| C4 | 0.0188 (14) | 0.0188 (14) | 0.0135 (13) | −0.0028 (11) | −0.0015 (10) | 0.0009 (10) |
| C5 | 0.0182 (14) | 0.0214 (15) | 0.0170 (12) | 0.0033 (12) | −0.0017 (10) | 0.0013 (11) |
| C6 | 0.0246 (15) | 0.0191 (15) | 0.0167 (12) | 0.0030 (13) | −0.0005 (12) | −0.0009 (10) |
| C7 | 0.0185 (14) | 0.0199 (14) | 0.0127 (12) | −0.0046 (12) | −0.0014 (11) | 0.0027 (11) |
| C8 | 0.0178 (14) | 0.0185 (14) | 0.0161 (13) | −0.0009 (11) | −0.0023 (11) | 0.0020 (11) |
| C9 | 0.0179 (14) | 0.0190 (14) | 0.0145 (13) | −0.0020 (11) | 0.0014 (11) | −0.0002 (11) |
| C10 | 0.0338 (18) | 0.0326 (18) | 0.0206 (15) | 0.0144 (15) | −0.0054 (13) | −0.0057 (13) |
| C11 | 0.0228 (18) | 0.067 (3) | 0.0278 (18) | 0.0075 (18) | 0.0006 (14) | −0.0051 (17) |
| C12 | 0.0276 (16) | 0.0190 (15) | 0.0118 (12) | 0.0013 (12) | −0.0031 (11) | −0.0007 (11) |
| C13 | 0.0316 (18) | 0.053 (2) | 0.0224 (15) | −0.0098 (18) | −0.0063 (14) | −0.0077 (16) |
| C14 | 0.054 (2) | 0.0239 (17) | 0.0171 (14) | 0.0089 (16) | −0.0062 (14) | −0.0036 (12) |
| C15 | 0.041 (2) | 0.0237 (16) | 0.0150 (14) | −0.0003 (15) | −0.0021 (13) | 0.0007 (12) |
| C16 | 0.0206 (14) | 0.0142 (13) | 0.0203 (13) | −0.0025 (12) | −0.0029 (11) | −0.0005 (11) |
| C17 | 0.0210 (14) | 0.0147 (14) | 0.0235 (15) | −0.0017 (11) | −0.0008 (11) | −0.0017 (11) |
| C18 | 0.0227 (16) | 0.0217 (16) | 0.0216 (15) | −0.0008 (13) | −0.0044 (12) | 0.0011 (12) |
| C19 | 0.0284 (16) | 0.0243 (16) | 0.0205 (14) | −0.0049 (13) | −0.0023 (12) | −0.0018 (13) |
| C20 | 0.0237 (15) | 0.0227 (16) | 0.0239 (14) | −0.0010 (13) | 0.0008 (12) | −0.0065 (12) |
| C21 | 0.0208 (14) | 0.0180 (14) | 0.0273 (16) | 0.0008 (11) | −0.0050 (11) | −0.0009 (11) |
| F1—C17 | 1.353 (3) | C10—C11 | 1.502 (5) |
| F2—C21 | 1.349 (3) | C10—H10A | 0.9900 |
| O1—C1 | 1.345 (4) | C10—H10B | 0.9900 |
| O1—C2 | 1.445 (4) | C11—H11A | 0.9800 |
| O2—C9 | 1.365 (3) | C11—H11B | 0.9800 |
| O2—C10 | 1.439 (4) | C11—H11C | 0.9800 |
| O3—C1 | 1.192 (4) | C12—C14 | 1.527 (4) |
| N1—C3 | 1.485 (3) | C12—C15 | 1.531 (4) |
| N1—H1A | 0.878 (18) | C12—C13 | 1.535 (5) |
| N1—H1B | 0.878 (18) | C13—H13A | 0.9800 |
| N1—H1C | 0.878 (18) | C13—H13B | 0.9800 |
| C1—C16 | 1.498 (4) | C13—H13C | 0.9800 |
| C2—C3 | 1.519 (4) | C14—H14A | 0.9800 |
| C2—H2A | 0.9900 | C14—H14B | 0.9800 |
| C2—H2B | 0.9900 | C14—H14C | 0.9800 |
| C3—C4 | 1.511 (4) | C15—H15A | 0.9800 |
| C3—H3 | 1.0000 | C15—H15B | 0.9800 |
| C4—C5 | 1.385 (4) | C15—H15C | 0.9800 |
| C4—C9 | 1.394 (4) | C16—C17 | 1.392 (4) |
| C5—C6 | 1.398 (4) | C16—C21 | 1.393 (4) |
| C5—H5 | 0.9500 | C17—C18 | 1.379 (4) |
| C6—C7 | 1.395 (4) | C18—C19 | 1.395 (4) |
| C6—H6 | 0.9500 | C18—H18 | 0.9500 |
| C7—C8 | 1.399 (4) | C19—C20 | 1.377 (5) |
| C7—C12 | 1.536 (4) | C19—H19 | 0.9500 |
| C8—C9 | 1.393 (4) | C20—C21 | 1.375 (4) |
| C8—H8 | 0.9500 | C20—H20 | 0.9500 |
| C1—O1—C2 | 117.1 (2) | C10—C11—H11B | 109.5 |
| C9—O2—C10 | 119.2 (2) | H11A—C11—H11B | 109.5 |
| C3—N1—H1A | 109.5 | C10—C11—H11C | 109.5 |
| C3—N1—H1B | 109.5 | H11A—C11—H11C | 109.5 |
| H1A—N1—H1B | 109.5 | H11B—C11—H11C | 109.5 |
| C3—N1—H1C | 109.5 | C14—C12—C15 | 108.0 (3) |
| H1A—N1—H1C | 109.5 | C14—C12—C13 | 108.7 (3) |
| H1B—N1—H1C | 109.5 | C15—C12—C13 | 109.4 (3) |
| O3—C1—O1 | 124.1 (3) | C14—C12—C7 | 112.3 (3) |
| O3—C1—C16 | 124.9 (3) | C15—C12—C7 | 109.6 (2) |
| O1—C1—C16 | 111.0 (3) | C13—C12—C7 | 108.8 (2) |
| O1—C2—C3 | 108.4 (2) | C12—C13—H13A | 109.5 |
| O1—C2—H2A | 110.0 | C12—C13—H13B | 109.5 |
| C3—C2—H2A | 110.0 | H13A—C13—H13B | 109.5 |
| O1—C2—H2B | 110.0 | C12—C13—H13C | 109.5 |
| C3—C2—H2B | 110.0 | H13A—C13—H13C | 109.5 |
| H2A—C2—H2B | 108.4 | H13B—C13—H13C | 109.5 |
| N1—C3—C4 | 111.7 (2) | C12—C14—H14A | 109.5 |
| N1—C3—C2 | 109.8 (2) | C12—C14—H14B | 109.5 |
| C4—C3—C2 | 110.9 (2) | H14A—C14—H14B | 109.5 |
| N1—C3—H3 | 108.1 | C12—C14—H14C | 109.5 |
| C4—C3—H3 | 108.1 | H14A—C14—H14C | 109.5 |
| C2—C3—H3 | 108.1 | H14B—C14—H14C | 109.5 |
| C5—C4—C9 | 118.7 (2) | C12—C15—H15A | 109.5 |
| C5—C4—C3 | 124.0 (3) | C12—C15—H15B | 109.5 |
| C9—C4—C3 | 117.4 (3) | H15A—C15—H15B | 109.5 |
| C4—C5—C6 | 120.9 (3) | C12—C15—H15C | 109.5 |
| C4—C5—H5 | 119.6 | H15A—C15—H15C | 109.5 |
| C6—C5—H5 | 119.6 | H15B—C15—H15C | 109.5 |
| C7—C6—C5 | 120.6 (3) | C17—C16—C21 | 115.3 (3) |
| C7—C6—H6 | 119.7 | C17—C16—C1 | 124.6 (3) |
| C5—C6—H6 | 119.7 | C21—C16—C1 | 120.1 (3) |
| C6—C7—C8 | 118.4 (3) | F1—C17—C18 | 117.4 (3) |
| C6—C7—C12 | 122.4 (3) | F1—C17—C16 | 119.0 (3) |
| C8—C7—C12 | 119.3 (3) | C18—C17—C16 | 123.5 (3) |
| C9—C8—C7 | 120.6 (3) | C17—C18—C19 | 118.3 (3) |
| C9—C8—H8 | 119.7 | C17—C18—H18 | 120.8 |
| C7—C8—H8 | 119.7 | C19—C18—H18 | 120.8 |
| O2—C9—C8 | 125.1 (3) | C20—C19—C18 | 120.4 (3) |
| O2—C9—C4 | 114.2 (2) | C20—C19—H19 | 119.8 |
| C8—C9—C4 | 120.8 (3) | C18—C19—H19 | 119.8 |
| O2—C10—C11 | 112.0 (3) | C21—C20—C19 | 119.1 (3) |
| O2—C10—H10A | 109.2 | C21—C20—H20 | 120.4 |
| C11—C10—H10A | 109.2 | C19—C20—H20 | 120.4 |
| O2—C10—H10B | 109.2 | F2—C21—C20 | 117.7 (3) |
| C11—C10—H10B | 109.2 | F2—C21—C16 | 119.0 (3) |
| H10A—C10—H10B | 107.9 | C20—C21—C16 | 123.3 (3) |
| C10—C11—H11A | 109.5 | ||
| C2—O1—C1—O3 | −2.5 (5) | C6—C7—C12—C14 | −0.3 (4) |
| C2—O1—C1—C16 | 175.2 (2) | C8—C7—C12—C14 | −179.3 (3) |
| C1—O1—C2—C3 | −120.5 (3) | C6—C7—C12—C15 | −120.3 (3) |
| O1—C2—C3—N1 | −58.2 (3) | C8—C7—C12—C15 | 60.6 (4) |
| O1—C2—C3—C4 | 177.9 (2) | C6—C7—C12—C13 | 120.1 (3) |
| N1—C3—C4—C5 | −24.0 (4) | C8—C7—C12—C13 | −58.9 (4) |
| C2—C3—C4—C5 | 98.7 (3) | O3—C1—C16—C17 | −148.9 (4) |
| N1—C3—C4—C9 | 155.1 (2) | O1—C1—C16—C17 | 33.5 (4) |
| C2—C3—C4—C9 | −82.2 (3) | O3—C1—C16—C21 | 33.7 (5) |
| C9—C4—C5—C6 | −1.0 (4) | O1—C1—C16—C21 | −144.0 (3) |
| C3—C4—C5—C6 | 178.1 (3) | C21—C16—C17—F1 | −177.2 (3) |
| C4—C5—C6—C7 | 0.6 (5) | C1—C16—C17—F1 | 5.3 (4) |
| C5—C6—C7—C8 | 0.4 (4) | C21—C16—C17—C18 | 0.9 (5) |
| C5—C6—C7—C12 | −178.6 (3) | C1—C16—C17—C18 | −176.6 (3) |
| C6—C7—C8—C9 | −0.9 (4) | F1—C17—C18—C19 | 179.1 (3) |
| C12—C7—C8—C9 | 178.1 (3) | C16—C17—C18—C19 | 1.0 (5) |
| C10—O2—C9—C8 | 19.4 (4) | C17—C18—C19—C20 | −1.5 (5) |
| C10—O2—C9—C4 | −161.5 (3) | C18—C19—C20—C21 | 0.1 (5) |
| C7—C8—C9—O2 | 179.5 (3) | C19—C20—C21—F2 | 179.9 (3) |
| C7—C8—C9—C4 | 0.5 (4) | C19—C20—C21—C16 | 2.1 (5) |
| C5—C4—C9—O2 | −178.6 (3) | C17—C16—C21—F2 | 179.7 (3) |
| C3—C4—C9—O2 | 2.2 (4) | C1—C16—C21—F2 | −2.7 (4) |
| C5—C4—C9—C8 | 0.5 (4) | C17—C16—C21—C20 | −2.5 (4) |
| C3—C4—C9—C8 | −178.7 (3) | C1—C16—C21—C20 | 175.2 (3) |
| C9—O2—C10—C11 | 67.6 (3) |
| D—H···A | D—H | H···A | D···A | D—H···A |
| N1—H1A···Br1i | 0.88 | 2.57 | 3.337 (2) | 147 |
| N1—H1A···F1ii | 0.88 | 2.52 | 3.073 (3) | 122 |
| N1—H1B···Br1ii | 0.88 | 2.39 | 3.259 (2) | 170 |
| N1—H1C···Br1 | 0.88 | 2.38 | 3.252 (2) | 175 |
| C10—H10A···Br1iii | 0.99 | 2.75 | 3.650 (3) | 152 |
| C2—H2B···O2 | 0.99 | 2.62 | 3.116 (4) | 111 |
| C8—H8···Br1iii | 0.95 | 3.10 | 4.040 (3) | 170 |
| Symmetry codes: (i) −x+1, −y+1, z; (ii) −y+1, x, −z+1; (iii) x−1/2, −y+3/2, −z+1/2. |
| C21H26F2NO3+·C4H3O4− | F(000) = 1040 |
| Mr = 493.49 | Dx = 1.347 Mg m−3 |
| Monoclinic, P21/n | Mo Kα radiation, λ = 0.71073 Å |
| a = 12.0615 (2) Å | Cell parameters from 9544 reflections |
| b = 15.3673 (3) Å | θ = 2.2–27.4° |
| c = 14.0141 (3) Å | µ = 0.11 mm−1 |
| β = 110.506 (1)° | T = 100 K |
| V = 2432.96 (8) Å3 | Irregular block, colourless |
| Z = 4 | 0.19 × 0.18 × 0.12 mm |
| Bruker D8 Venture dual source diffractometer | 5576 independent reflections |
| Radiation source: microsource | 4976 reflections with I > 2σ(I) |
| Detector resolution: 7.41 pixels mm-1 | Rint = 0.031 |
| φ and ω scans | θmax = 27.5°, θmin = 1.9° |
| Absorption correction: multi-scan (SADABS; Krause et al., 2015) | h = −15→14 |
| Tmin = 0.917, Tmax = 0.971 | k = −19→19 |
| 42339 measured reflections | l = −18→18 |
| Refinement on F2 | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| R[F2 > 2σ(F2)] = 0.036 | Hydrogen site location: difference Fourier map |
| wR(F2) = 0.101 | H atoms treated by a mixture of independent and constrained refinement |
| S = 1.03 | w = 1/[σ2(Fo2) + (0.0478P)2 + 0.9503P] where P = (Fo2 + 2Fc2)/3 |
| 5576 reflections | (Δ/σ)max = 0.001 |
| 324 parameters | Δρmax = 0.34 e Å−3 |
| 0 restraints | Δρmin = −0.21 e Å−3 |
Experimental. The crystal was mounted using polyisobutene oil on the tip of a fine glass fibre, which was fastened in a copper mounting pin with electrical solder. It was placed directly into the cold gas stream of a liquid-nitrogen based cryostat (Hope, 1994; Parkin & Hope, 1998). Diffraction data were collected with the crystal at 100K. |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement progress was checked using Platon (Spek, 2020) and by an R-tensor (Parkin, 2000). The final model was further checked with the IUCr utility checkCIF. |
| x | y | z | Uiso*/Ueq | ||
| F1 | 0.67039 (8) | 0.57077 (6) | 0.21102 (6) | 0.0434 (2) | |
| F2 | 0.85345 (9) | 0.79866 (6) | 0.43330 (9) | 0.0529 (3) | |
| O1 | 0.76401 (7) | 0.55478 (5) | 0.41727 (6) | 0.02341 (18) | |
| O2 | 0.88984 (7) | 0.39851 (5) | 0.69176 (6) | 0.02211 (18) | |
| O3 | 0.93824 (8) | 0.62310 (6) | 0.45018 (8) | 0.0378 (2) | |
| N1 | 0.67234 (8) | 0.48113 (6) | 0.56665 (7) | 0.01848 (19) | |
| H1A | 0.6474 (7) | 0.5332 (5) | 0.5391 (4) | 0.028* | |
| H1B | 0.7273 (5) | 0.4881 (5) | 0.6284 (6) | 0.028* | |
| H1C | 0.6112 (8) | 0.4514 (4) | 0.5722 (5) | 0.028* | |
| C1 | 0.83341 (10) | 0.61834 (8) | 0.40508 (9) | 0.0249 (2) | |
| C2 | 0.82292 (10) | 0.48524 (7) | 0.48618 (9) | 0.0231 (2) | |
| H2A | 0.875467 | 0.509055 | 0.552164 | 0.028* | |
| H2B | 0.870751 | 0.449240 | 0.456488 | 0.028* | |
| C3 | 0.72419 (10) | 0.43206 (7) | 0.50020 (8) | 0.0193 (2) | |
| H3 | 0.660726 | 0.426428 | 0.431710 | 0.023* | |
| C4 | 0.75887 (9) | 0.34111 (7) | 0.54008 (8) | 0.0185 (2) | |
| C5 | 0.70565 (10) | 0.26951 (7) | 0.48146 (8) | 0.0221 (2) | |
| H5 | 0.645992 | 0.278477 | 0.416717 | 0.026* | |
| C6 | 0.73754 (10) | 0.18537 (7) | 0.51519 (9) | 0.0230 (2) | |
| H6 | 0.699717 | 0.137722 | 0.473208 | 0.028* | |
| C7 | 0.82469 (10) | 0.16949 (7) | 0.61028 (8) | 0.0198 (2) | |
| C8 | 0.87624 (10) | 0.24084 (7) | 0.67047 (8) | 0.0195 (2) | |
| H8 | 0.934267 | 0.231802 | 0.736020 | 0.023* | |
| C9 | 0.84405 (9) | 0.32533 (7) | 0.63609 (8) | 0.0185 (2) | |
| C10 | 0.99214 (10) | 0.38980 (8) | 0.78240 (9) | 0.0252 (2) | |
| H10A | 1.051536 | 0.351424 | 0.769867 | 0.030* | |
| H10B | 0.969971 | 0.364617 | 0.838243 | 0.030* | |
| C11 | 1.04123 (13) | 0.48013 (9) | 0.80978 (12) | 0.0401 (4) | |
| H11A | 1.057683 | 0.505607 | 0.752027 | 0.060* | |
| H11B | 1.114639 | 0.477314 | 0.869048 | 0.060* | |
| H11C | 0.983333 | 0.516271 | 0.826106 | 0.060* | |
| C12 | 0.86045 (11) | 0.07546 (7) | 0.64402 (9) | 0.0231 (2) | |
| C13 | 0.90985 (13) | 0.03290 (9) | 0.56848 (10) | 0.0325 (3) | |
| H13A | 0.849949 | 0.034849 | 0.499884 | 0.049* | |
| H13B | 0.930531 | −0.027790 | 0.588232 | 0.049* | |
| H13C | 0.980690 | 0.064420 | 0.568981 | 0.049* | |
| C14 | 0.75153 (12) | 0.02405 (8) | 0.64565 (10) | 0.0304 (3) | |
| H14A | 0.689378 | 0.026624 | 0.578204 | 0.046* | |
| H14B | 0.722055 | 0.049559 | 0.696287 | 0.046* | |
| H14C | 0.773838 | −0.036733 | 0.663484 | 0.046* | |
| C15 | 0.95581 (12) | 0.07098 (8) | 0.75090 (9) | 0.0282 (3) | |
| H15A | 0.975912 | 0.010015 | 0.769547 | 0.042* | |
| H15B | 0.925608 | 0.097883 | 0.800339 | 0.042* | |
| H15C | 1.026686 | 0.102185 | 0.750946 | 0.042* | |
| C16 | 0.76319 (11) | 0.68173 (8) | 0.32678 (10) | 0.0262 (3) | |
| C17 | 0.68208 (12) | 0.65686 (10) | 0.2331 (1) | 0.0333 (3) | |
| C18 | 0.61531 (13) | 0.71439 (12) | 0.16093 (12) | 0.0452 (4) | |
| H18 | 0.560383 | 0.694544 | 0.097881 | 0.054* | |
| C19 | 0.63056 (15) | 0.80174 (12) | 0.18290 (15) | 0.0521 (5) | |
| H19 | 0.583635 | 0.842656 | 0.134830 | 0.062* | |
| C20 | 0.71214 (15) | 0.83136 (11) | 0.27283 (16) | 0.0509 (4) | |
| H20 | 0.723916 | 0.891948 | 0.285955 | 0.061* | |
| C21 | 0.77655 (13) | 0.77084 (9) | 0.34364 (12) | 0.0375 (3) | |
| O4 | 0.47353 (7) | 0.38720 (5) | 0.53105 (6) | 0.02278 (18) | |
| O5 | 0.40305 (8) | 0.25232 (6) | 0.53032 (6) | 0.0292 (2) | |
| O6 | 0.74564 (8) | 0.26663 (5) | 0.85732 (6) | 0.0274 (2) | |
| H6A | 0.8000 (14) | 0.2498 (4) | 0.9192 (13) | 0.041* | |
| O7 | 0.68739 (8) | 0.12803 (6) | 0.85259 (7) | 0.0313 (2) | |
| C22 | 0.47330 (9) | 0.31260 (7) | 0.56934 (8) | 0.0192 (2) | |
| C23 | 0.56755 (9) | 0.29645 (7) | 0.67107 (8) | 0.0197 (2) | |
| H23 | 0.615376 | 0.343869 | 0.705630 | 0.024* | |
| C24 | 0.58657 (10) | 0.21927 (7) | 0.71429 (8) | 0.0217 (2) | |
| H24 | 0.538305 | 0.172432 | 0.678666 | 0.026* | |
| C25 | 0.67817 (10) | 0.20027 (7) | 0.81480 (8) | 0.0213 (2) |
| U11 | U22 | U33 | U12 | U13 | U23 | |
| F1 | 0.0488 (5) | 0.0455 (5) | 0.0311 (4) | −0.0028 (4) | 0.0082 (4) | −0.0020 (4) |
| F2 | 0.0510 (6) | 0.0265 (4) | 0.0756 (7) | −0.0040 (4) | 0.0153 (5) | −0.0059 (4) |
| O1 | 0.0237 (4) | 0.0208 (4) | 0.0242 (4) | 0.0011 (3) | 0.0066 (3) | 0.0057 (3) |
| O2 | 0.0215 (4) | 0.0164 (4) | 0.0205 (4) | 0.0018 (3) | −0.0026 (3) | −0.0011 (3) |
| O3 | 0.0224 (4) | 0.0356 (5) | 0.0520 (6) | 0.0002 (4) | 0.0089 (4) | 0.0142 (5) |
| N1 | 0.0176 (4) | 0.0158 (4) | 0.0195 (4) | 0.0016 (3) | 0.0033 (3) | 0.0016 (3) |
| C1 | 0.0246 (6) | 0.0222 (6) | 0.0295 (6) | 0.0015 (4) | 0.0116 (5) | 0.0033 (5) |
| C2 | 0.0226 (5) | 0.0202 (5) | 0.0256 (6) | 0.0035 (4) | 0.0072 (4) | 0.0048 (4) |
| C3 | 0.0214 (5) | 0.0167 (5) | 0.0173 (5) | 0.0015 (4) | 0.0037 (4) | 0.0002 (4) |
| C4 | 0.0193 (5) | 0.0166 (5) | 0.0182 (5) | 0.0018 (4) | 0.0049 (4) | 0.0011 (4) |
| C5 | 0.0244 (5) | 0.0196 (5) | 0.0175 (5) | 0.0012 (4) | 0.0015 (4) | 0.0001 (4) |
| C6 | 0.0281 (6) | 0.0170 (5) | 0.0198 (5) | −0.0003 (4) | 0.0031 (4) | −0.0019 (4) |
| C7 | 0.0216 (5) | 0.0175 (5) | 0.0199 (5) | 0.0021 (4) | 0.0069 (4) | 0.0006 (4) |
| C8 | 0.0191 (5) | 0.0194 (5) | 0.0178 (5) | 0.0025 (4) | 0.0038 (4) | 0.0012 (4) |
| C9 | 0.0179 (5) | 0.0171 (5) | 0.0191 (5) | 0.0002 (4) | 0.0049 (4) | −0.0015 (4) |
| C10 | 0.0219 (5) | 0.0206 (5) | 0.0233 (5) | 0.0013 (4) | −0.0043 (4) | 0.0003 (4) |
| C11 | 0.0325 (7) | 0.0236 (6) | 0.0436 (8) | −0.0011 (5) | −0.0123 (6) | 0.0007 (6) |
| C12 | 0.0288 (6) | 0.0166 (5) | 0.0215 (5) | 0.0038 (4) | 0.0057 (4) | 0.0006 (4) |
| C13 | 0.0413 (7) | 0.0276 (6) | 0.0283 (6) | 0.0116 (5) | 0.0119 (5) | 0.0006 (5) |
| C14 | 0.0354 (7) | 0.0228 (6) | 0.0299 (6) | −0.0009 (5) | 0.0078 (5) | 0.0039 (5) |
| C15 | 0.0341 (6) | 0.0212 (6) | 0.0248 (6) | 0.0056 (5) | 0.0047 (5) | 0.0040 (5) |
| C16 | 0.0238 (6) | 0.0247 (6) | 0.0339 (6) | 0.0033 (5) | 0.0151 (5) | 0.0092 (5) |
| C17 | 0.0302 (6) | 0.0433 (8) | 0.0305 (6) | 0.0035 (6) | 0.0155 (5) | 0.0113 (6) |
| C18 | 0.0337 (7) | 0.0687 (11) | 0.0364 (8) | 0.0105 (7) | 0.0162 (6) | 0.0246 (7) |
| C19 | 0.0404 (8) | 0.0587 (11) | 0.0656 (11) | 0.0195 (8) | 0.0292 (8) | 0.0401 (9) |
| C20 | 0.0474 (9) | 0.0308 (8) | 0.0837 (13) | 0.0131 (7) | 0.0342 (9) | 0.0248 (8) |
| C21 | 0.0330 (7) | 0.0286 (7) | 0.0536 (9) | 0.0012 (5) | 0.0188 (6) | 0.0072 (6) |
| O4 | 0.0183 (4) | 0.0208 (4) | 0.0251 (4) | 0.0018 (3) | 0.0023 (3) | 0.0076 (3) |
| O5 | 0.0288 (4) | 0.0240 (4) | 0.0226 (4) | −0.0066 (3) | −0.0063 (3) | 0.0042 (3) |
| O6 | 0.0294 (4) | 0.0214 (4) | 0.0199 (4) | −0.0031 (3) | −0.0060 (3) | 0.0028 (3) |
| O7 | 0.0328 (5) | 0.0211 (4) | 0.0286 (4) | −0.0010 (4) | −0.0035 (4) | 0.0078 (3) |
| C22 | 0.0179 (5) | 0.0191 (5) | 0.0181 (5) | 0.0016 (4) | 0.0030 (4) | 0.0024 (4) |
| C23 | 0.0187 (5) | 0.0190 (5) | 0.0174 (5) | −0.0016 (4) | 0.0014 (4) | 0.0000 (4) |
| C24 | 0.0215 (5) | 0.0192 (5) | 0.0187 (5) | −0.0021 (4) | 0.0002 (4) | 0.0007 (4) |
| C25 | 0.0216 (5) | 0.0203 (5) | 0.0188 (5) | 0.0006 (4) | 0.0032 (4) | 0.0017 (4) |
| F1—C17 | 1.3547 (17) | C11—H11C | 0.9800 |
| F2—C21 | 1.3436 (19) | C12—C13 | 1.5314 (17) |
| O1—C1 | 1.3357 (14) | C12—C15 | 1.5376 (16) |
| O1—C2 | 1.4488 (13) | C12—C14 | 1.5400 (17) |
| O2—C9 | 1.3698 (13) | C13—H13A | 0.9800 |
| O2—C10 | 1.4338 (13) | C13—H13B | 0.9800 |
| O3—C1 | 1.2015 (15) | C13—H13C | 0.9800 |
| N1—C3 | 1.4950 (14) | C14—H14A | 0.9800 |
| N1—H1A | 0.893 (8) | C14—H14B | 0.9800 |
| N1—H1B | 0.893 (8) | C14—H14C | 0.9800 |
| N1—H1C | 0.893 (8) | C15—H15A | 0.9800 |
| C1—C16 | 1.4898 (16) | C15—H15B | 0.9800 |
| C2—C3 | 1.5127 (16) | C15—H15C | 0.9800 |
| C2—H2A | 0.9900 | C16—C17 | 1.3881 (19) |
| C2—H2B | 0.9900 | C16—C21 | 1.3894 (19) |
| C3—C4 | 1.5089 (15) | C17—C18 | 1.372 (2) |
| C3—H3 | 1.0000 | C18—C19 | 1.375 (3) |
| C4—C5 | 1.3886 (15) | C18—H18 | 0.9500 |
| C4—C9 | 1.3986 (15) | C19—C20 | 1.377 (3) |
| C5—C6 | 1.3841 (16) | C19—H19 | 0.9500 |
| C5—H5 | 0.9500 | C20—C21 | 1.383 (2) |
| C6—C7 | 1.3996 (15) | C20—H20 | 0.9500 |
| C6—H6 | 0.9500 | O4—C22 | 1.2661 (13) |
| C7—C8 | 1.3903 (15) | O5—C22 | 1.2452 (14) |
| C7—C12 | 1.5345 (15) | O6—C25 | 1.3106 (14) |
| C8—C9 | 1.3920 (15) | O6—H6A | 0.922 (18) |
| C8—H8 | 0.9500 | O7—C25 | 1.2182 (14) |
| C10—C11 | 1.5052 (17) | C22—C23 | 1.5003 (14) |
| C10—H10A | 0.9900 | C23—C24 | 1.3149 (16) |
| C10—H10B | 0.9900 | C23—H23 | 0.9500 |
| C11—H11A | 0.9800 | C24—C25 | 1.4831 (15) |
| C11—H11B | 0.9800 | C24—H24 | 0.9500 |
| C1—O1—C2 | 116.21 (9) | C13—C12—C15 | 108.35 (10) |
| C9—O2—C10 | 118.56 (8) | C7—C12—C15 | 112.08 (9) |
| C3—N1—H1A | 109.5 | C13—C12—C14 | 109.37 (10) |
| C3—N1—H1B | 109.5 | C7—C12—C14 | 109.78 (10) |
| H1A—N1—H1B | 109.5 | C15—C12—C14 | 108.27 (10) |
| C3—N1—H1C | 109.5 | C12—C13—H13A | 109.5 |
| H1A—N1—H1C | 109.5 | C12—C13—H13B | 109.5 |
| H1B—N1—H1C | 109.5 | H13A—C13—H13B | 109.5 |
| O3—C1—O1 | 124.64 (11) | C12—C13—H13C | 109.5 |
| O3—C1—C16 | 124.72 (11) | H13A—C13—H13C | 109.5 |
| O1—C1—C16 | 110.63 (10) | H13B—C13—H13C | 109.5 |
| O1—C2—C3 | 105.09 (9) | C12—C14—H14A | 109.5 |
| O1—C2—H2A | 110.7 | C12—C14—H14B | 109.5 |
| C3—C2—H2A | 110.7 | H14A—C14—H14B | 109.5 |
| O1—C2—H2B | 110.7 | C12—C14—H14C | 109.5 |
| C3—C2—H2B | 110.7 | H14A—C14—H14C | 109.5 |
| H2A—C2—H2B | 108.8 | H14B—C14—H14C | 109.5 |
| N1—C3—C4 | 111.02 (9) | C12—C15—H15A | 109.5 |
| N1—C3—C2 | 109.19 (9) | C12—C15—H15B | 109.5 |
| C4—C3—C2 | 114.82 (9) | H15A—C15—H15B | 109.5 |
| N1—C3—H3 | 107.2 | C12—C15—H15C | 109.5 |
| C4—C3—H3 | 107.2 | H15A—C15—H15C | 109.5 |
| C2—C3—H3 | 107.2 | H15B—C15—H15C | 109.5 |
| C5—C4—C9 | 117.6 (1) | C17—C16—C21 | 115.70 (12) |
| C5—C4—C3 | 120.28 (9) | C17—C16—C1 | 123.17 (12) |
| C9—C4—C3 | 122.13 (10) | C21—C16—C1 | 121.13 (12) |
| C6—C5—C4 | 121.51 (10) | F1—C17—C18 | 118.27 (14) |
| C6—C5—H5 | 119.2 | F1—C17—C16 | 117.86 (12) |
| C4—C5—H5 | 119.2 | C18—C17—C16 | 123.85 (15) |
| C5—C6—C7 | 120.95 (10) | C17—C18—C19 | 117.77 (16) |
| C5—C6—H6 | 119.5 | C17—C18—H18 | 121.1 |
| C7—C6—H6 | 119.5 | C19—C18—H18 | 121.1 |
| C8—C7—C6 | 117.86 (10) | C18—C19—C20 | 121.64 (14) |
| C8—C7—C12 | 122.55 (10) | C18—C19—H19 | 119.2 |
| C6—C7—C12 | 119.6 (1) | C20—C19—H19 | 119.2 |
| C7—C8—C9 | 120.95 (10) | C19—C20—C21 | 118.43 (16) |
| C7—C8—H8 | 119.5 | C19—C20—H20 | 120.8 |
| C9—C8—H8 | 119.5 | C21—C20—H20 | 120.8 |
| O2—C9—C8 | 124.1 (1) | F2—C21—C20 | 119.16 (14) |
| O2—C9—C4 | 114.79 (9) | F2—C21—C16 | 118.27 (13) |
| C8—C9—C4 | 121.1 (1) | C20—C21—C16 | 122.56 (16) |
| O2—C10—C11 | 106.22 (9) | C25—O6—H6A | 109.5 |
| O2—C10—H10A | 110.5 | O5—C22—O4 | 126.13 (10) |
| C11—C10—H10A | 110.5 | O5—C22—C23 | 117.83 (10) |
| O2—C10—H10B | 110.5 | O4—C22—C23 | 116.04 (10) |
| C11—C10—H10B | 110.5 | C24—C23—C22 | 122.6 (1) |
| H10A—C10—H10B | 108.7 | C24—C23—H23 | 118.7 |
| C10—C11—H11A | 109.5 | C22—C23—H23 | 118.7 |
| C10—C11—H11B | 109.5 | C23—C24—C25 | 124.52 (10) |
| H11A—C11—H11B | 109.5 | C23—C24—H24 | 117.7 |
| C10—C11—H11C | 109.5 | C25—C24—H24 | 117.7 |
| H11A—C11—H11C | 109.5 | O7—C25—O6 | 124.32 (10) |
| H11B—C11—H11C | 109.5 | O7—C25—C24 | 121.09 (10) |
| C13—C12—C7 | 108.94 (10) | O6—C25—C24 | 114.58 (10) |
| C2—O1—C1—O3 | −3.44 (18) | C8—C7—C12—C15 | 1.27 (16) |
| C2—O1—C1—C16 | 175.71 (10) | C6—C7—C12—C15 | −179.17 (11) |
| C1—O1—C2—C3 | 170.25 (9) | C8—C7—C12—C14 | 121.63 (12) |
| O1—C2—C3—N1 | −73.64 (10) | C6—C7—C12—C14 | −58.81 (14) |
| O1—C2—C3—C4 | 160.96 (9) | O3—C1—C16—C17 | 132.61 (14) |
| N1—C3—C4—C5 | 118.11 (11) | O1—C1—C16—C17 | −46.55 (16) |
| C2—C3—C4—C5 | −117.45 (12) | O3—C1—C16—C21 | −46.75 (19) |
| N1—C3—C4—C9 | −61.61 (13) | O1—C1—C16—C21 | 134.09 (12) |
| C2—C3—C4—C9 | 62.83 (14) | C21—C16—C17—F1 | 176.68 (11) |
| C9—C4—C5—C6 | −1.68 (17) | C1—C16—C17—F1 | −2.72 (18) |
| C3—C4—C5—C6 | 178.60 (11) | C21—C16—C17—C18 | −1.76 (19) |
| C4—C5—C6—C7 | 0.26 (18) | C1—C16—C17—C18 | 178.84 (12) |
| C5—C6—C7—C8 | 1.34 (17) | F1—C17—C18—C19 | −178.03 (12) |
| C5—C6—C7—C12 | −178.24 (11) | C16—C17—C18—C19 | 0.4 (2) |
| C6—C7—C8—C9 | −1.49 (16) | C17—C18—C19—C20 | 1.8 (2) |
| C12—C7—C8—C9 | 178.08 (10) | C18—C19—C20—C21 | −2.4 (2) |
| C10—O2—C9—C8 | 12.17 (16) | C19—C20—C21—F2 | −177.63 (14) |
| C10—O2—C9—C4 | −168.79 (10) | C19—C20—C21—C16 | 0.9 (2) |
| C7—C8—C9—O2 | 179.04 (10) | C17—C16—C21—F2 | 179.64 (12) |
| C7—C8—C9—C4 | 0.06 (17) | C1—C16—C21—F2 | −0.95 (19) |
| C5—C4—C9—O2 | −177.55 (10) | C17—C16—C21—C20 | 1.1 (2) |
| C3—C4—C9—O2 | 2.17 (15) | C1—C16—C21—C20 | −179.53 (13) |
| C5—C4—C9—C8 | 1.52 (16) | O5—C22—C23—C24 | 7.78 (17) |
| C3—C4—C9—C8 | −178.76 (10) | O4—C22—C23—C24 | −171.94 (11) |
| C9—O2—C10—C11 | 164.55 (11) | C22—C23—C24—C25 | −179.7 (1) |
| C8—C7—C12—C13 | −118.63 (12) | C23—C24—C25—O7 | 176.53 (12) |
| C6—C7—C12—C13 | 60.93 (14) | C23—C24—C25—O6 | −3.43 (17) |
| D—H···A | D—H | H···A | D···A | D—H···A |
| N1—H1A···O4i | 0.89 | 1.89 | 2.7160 (12) | 152 |
| N1—H1B···O2 | 0.89 | 2.30 | 2.8889 (12) | 123 |
| N1—H1B···O7ii | 0.89 | 2.36 | 2.8103 (13) | 112 |
| N1—H1C···O4 | 0.89 | 1.84 | 2.6915 (12) | 158 |
| C2—H2A···O7ii | 0.99 | 2.53 | 3.1832 (15) | 123 |
| C2—H2B···O3iii | 0.99 | 2.48 | 3.1727 (15) | 127 |
| O6—H6A···O5iv | 0.92 | 1.62 | 2.5184 (11) | 165 |
| Symmetry codes: (i) −x+1, −y+1, −z+1; (ii) −x+3/2, y+1/2, −z+3/2; (iii) −x+2, −y+1, −z+1; (iv) x+1/2, −y+1/2, z+1/2. |
| Torsion angle | I | II |
| C5—C4—C3—C2 | 98.7 (3) | -117.45 (12) |
| C4—C3—C2—O1 | 178.0 (2) | 160.96 (9) |
| C3—C2—O1—C1 | -120.5 (3) | 170.25 (9) |
| C2—O1—C1—C16 | 175.2 (2) | 175.71 (10) |
| O1—C1—C16—C21 | -144.0 (3) | 134.09 (12) |
| N1—C3—C2—O1 | -58.2 (3) | -73.64 (10) |
| N1—C3—C4—C9 | 155.1 (3) | -61.61 (13) |
| C9—O2—C10—C11 | 67.6 (4) | 164.55 (11) |
| C4—C9—O2—C10 | -161.5 (3) | -168.79 (10) |
| C8—C7—C13—C14 | 165.0 (2) | 123.99 (12) |
Acknowledgements
The authors thank Honeychem Pharma Research Pvt. Ltd., Peenya Industrial Area, Bengaluru-560 058, India, for the gift sample of R7.
Funding information
The D8 Venture diffractometer was funded by the NSF (MRI CHE1625732), and by the University of Kentucky.
References
Bruker (2023). APEX5. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Groom, C. R., Bruno, I. J., Lightfoot, M. P. & Ward, S. C. (2016). Acta Cryst. B72, 171–179. Web of Science CrossRef IUCr Journals Google Scholar
Krause, L., Herbst-Irmer, R., Sheldrick, G. M. & Stalke, D. (2015). J. Appl. Cryst. 48, 3–10. Web of Science CSD CrossRef ICSD CAS IUCr Journals Google Scholar
Li, Y., Yang, N., Wei, X., Ling, Y., Yang, X. & Wang, Q. (2014). J. Insect Sci. 14, 104. Web of Science PubMed Google Scholar
Macar, O., Kalefetoğlu Macar, T., Çavuşoğlu, K. & Yalçın, E. (2022). Sci. Rep. 12, 20453. Web of Science CrossRef PubMed Google Scholar
Maligres, P. E., Waters, M. M., Lee, J., Reamer, R. A., Askin, D., Ashwood, M. S. & Cameron, M. (2002). J. Org. Chem. 67, 1093–1101. Web of Science CSD CrossRef PubMed CAS Google Scholar
Mohan Kumar, T. M., Bhaskar, B. L., Priyanka, P., Divakara, T. R., Yathirajan, H. S. & Parkin, S. (2024). Acta Cryst. E80, 1270–1273. Web of Science CSD CrossRef IUCr Journals Google Scholar
Park, W., Lim, W., Park, S., Whang, K.-Y. & Song, G. (2020). Environ. Pollut. 257, 113480. Web of Science CrossRef PubMed Google Scholar
Parkin, S. (2025). Programs over-rip, over-rot, over-lay. https://xray. uky. edu/Tutorials/structure-overlays. Google Scholar
Parsons, S., Flack, H. D. & Wagner, T. (2013). Acta Cryst. B69, 249–259. Web of Science CSD CrossRef CAS IUCr Journals Google Scholar
Seiler, M., Schumacher, A., Lindemann, U., Barbosa, F. & Giese, B. (1999). Synlett pp. 1588–1590. Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Sheldrick, G. M. (2015a). Acta Cryst. A71, 3–8. Web of Science CrossRef IUCr Journals Google Scholar
Sheldrick, G. M. (2015b). Acta Cryst. C71, 3–8. Web of Science CrossRef IUCr Journals Google Scholar
Sowbhagya, C., Mohan Kumar, T. M., Bhavya, P., Yathirajan, H. S. & Parkin, S. (2025b). Acta Cryst. E81, 964–967. Web of Science CSD CrossRef IUCr Journals Google Scholar
Sowbhagya, C., Mohan Kumar, T. M., Yathirajan, H. S. & Parkin, S. (2025a). Acta Cryst. E81, 239–242. Web of Science CSD CrossRef IUCr Journals Google Scholar
Spackman, P. R., Turner, M. J., McKinnon, J. J., Wolff, S. K., Grimwood, D. J., Jayatilaka, D. & Spackman, M. A. (2021). J. Appl. Cryst. 54, 1006–1011. Web of Science CrossRef CAS IUCr Journals Google Scholar
Sun, D., Wang, Y., Zhang, Q. & Pang, J. (2019). Chemosphere 226, 782–790. Web of Science CrossRef CAS PubMed Google Scholar
Suzuki, J., Ishida, T., Kikuchi, Y., Ito, Y., Morikawa, C., Tsukidate, Y., Tanji, I., Ota, Y. & Toda, K. (2002). J. Pestic. Sci. 27, 1–8. CrossRef Google Scholar
Westrip, S. P. (2010). J. Appl. Cryst. 43, 920–925. Web of Science CrossRef CAS IUCr Journals Google Scholar
Xing, S., Cui, H., Qin, J., Gu, N., Zhang, B., Wang, K., Wang, Y., Xia, L. & Wang, Y. (2018). Org. Chem. Front. 5, 1950–1956. Web of Science CSD CrossRef CAS Google Scholar
Yilmaz, M., Rencuzogullari, E. & Canli, M. (2017). Environ. Sci. Pollut. Res. 24, 19635–19639. Web of Science CrossRef CAS Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.

journal menu
access



