research communications
Synthesis and structure of 3-(14H-dibenzo[a,j]xanthen-14-yl)phenyl nicotinate
aInstitute of Physical Organic Chemistry, National Academy of Sciences of Belarus, Minsk, 220072, Belarus, bFrumkin Institute of Physical Chemistry and Electrochemistry, Russian Academy of Sciences, Leninsky prosp. 31, bld. 4, Moscow 119071, Russian Federation, cRUDN University, 6 Miklukho-Maklaya St., Moscow 117198, Russian Federation, dHacettepe University, Department of Physics, 06800 Beytepe-Ankara, Türkiye, eAzerbaijan Medical University, Scientific Research Centre (SRC), A. Kasumzade St. 14, AZ 1022, Baku, Azerbaijan, and fDepartment of Chemistry, Bahir Dar University, PO Box 79, Bahir Dar, Ethiopia
*Correspondence e-mail: [email protected]
In the title compound, C33H21NO3, the dihedral angle between the naphthalene units is 10.85 (4)° and the pyran ring adopts a shallow boat conformation. In the crystal, C—H⋯N and C—H⋯O hydrogen bonds link the molecules, enclosing R22(16) ring motifs. Hirshfeld surface analysis revealed that the most important contributions for the crystal packing are from H⋯H, H⋯C/C⋯H, H⋯O/O⋯H and C⋯C interactions, at 45.8%, 27.3%, 11.2% and 9.6%, respectively.
Keywords: xanthenes; crystal structure; non-covalent interactions.
CCDC reference: 2543051
1. Chemical context
Dibenzo[a,j]xanthenes are heterocyclic aromatic compounds consisting of a central pyran ring fused to two naphthalene units. Owing to their extended π-conjugation and nearly planar structures, these compounds have found applications as photosensitive materials (Brøndsted & Stains 2024
; Rawat et al., 2025
) and DNA intercalators (Tacar et al., 2013
). In addition, several derivatives exhibit significant biological activity, including antibacterial (Amininasab et al., 2020
) and antiviral properties (Reddi Mohan Naidu et al., 2012
), and have shown potential for use in cancer photodynamic therapy (Smolobochkin et al., 2024
; Wang et al., 2020
; Karaman et al., 2023
).
The condensation of β-naphthol with aldehydes represents one of the most convenient and widely used approaches for the synthesis of these compounds, with catalyst selection being a key factor for reaction efficiency. Over the past several years, we have investigated the application of the sulfonic cation-exchange resin FIBAN K-1 as a catalyst for the efficient synthesis of xanthene derivatives (Akishina et al., 2025
; Akishina et al., 2023
).
Examining the spatial arrangement of dibenzoxanthenes can offer insights into their electronic conjugation and molecular planarity, which are crucial factors affecting fluorescence efficiency, quantum yield and emission wavelength (Ji et al., 2024
). In addition, to evaluate the biological potential of a molecule using the molecular docking method detailed information about the structures of promising molecules is essential (Akishina et al., 2026
).
As part of our ongoing studies in this area, we now describe the synthesis and crystal structure, together with the Hirshfeld surface analysis, of the title compound, C33H21NO3 (1).
2. Structural commentary
The of (1) consists of one molecule in space group P. The molecule is constructed from 14H-dibenzo[a,j]xanthene and phenyl nicotinate moieties connected via the C14—C21 bond (Fig. 1
). In the first of these, the benzene A (C1–C4/C4A/C14B), B (C4A/C5/C6/C6A/C14A/C14B), D (C7A/C8/C9/C9A/C13A/C13B) and E (C9A/C10–C13/C13A) rings are oriented at dihedral angles of A/B = 1.36 (4)° and D/E = 1.53 (4)°, indicating a slight puckering of the naphthyl units. The dihedral angle between the naphthyl units is 10.85 (4)°. The non-planar pyran C (O7/C6A/C7A/C13B/C14/C14A) ring is in a shallow boat conformation with Cremer–Pople puckering parameters of QT = 0.1973 (14) Å, θ = 101.97 (43)° and φ = 10.3 (4)°. Alternately, we may state that atoms O7 and C14 are displaced from the mean plane of atoms C6A/C7A/C13B/C14A (r.m.s. deviation = 0.034 Å) by −0.114 (1) and −0.218 (1) Å, respectively. On the other hand, the phenyl F (C21–C26) and pyridine G (C31–C36/N33) rings are almost perpendicularly oriented at a dihedral angle of F/G = 83.39 (5)°. The ester O1—C15—O2 [123.75 (12)°] bond angle is slightly increased with respect to that present in the free acid [122.2°] (Sim et al., 1955
).
| Figure 1 The molecular structure of (1) showing 50% displacement ellipsoids. |
3. Supramolecular features
In the crystal, C—H⋯N and C—H⋯O hydrogen bonds (Table 1
) link the molecules, enclosing R22(16) ring motifs (Etter et al., 1990
) (Fig. 2
). In addition, C—H⋯π interactions (Table 1
) and weak π–π stacking interactions between the B and G, A and E, D and E and between the E rings [with centroid-to-centroid distances and α values of 3.7087 (7) Å and 11.53°, 3.8153 (9) Å and 10.29 °, 4.7923 (9) Å and 1.49° and 4.3282 (9) Å and 0.00°, respectively] may help to consolidate the three-dimensional architecture.
|
| Figure 2 The partial packing diagram of (1) with C—H⋯N and C—H⋯O hydrogen bonds shown as dashed lines. H atoms not involved in these interactions have been omitted for clarity. |
4. Hirshfeld surface analysis
For visualizing the intermolecular interactions in the crystal of (1), Hirshfeld surface (HS) analysis was carried out by using Crystal Explorer 17.5 (Spackman et al., 2021
). In the HS plotted over dnorm (Fig. 3
), the red spots indicate their roles as the respective donors and/or acceptors in hydrogen bonding, as discussed above. The overall two-dimensional fingerprint plot is shown in Fig. 6a and those delineated into various contact types are illustrated in Fig. 6b–j. According to the fingerprint plots, H⋯H, H⋯C/C⋯H, H⋯O/O⋯H and C⋯C contacts make the most significant contributions to the HS, at 45.8%, 27.3%, 11.2% and 9.6%, respectively (Fig. 4
).
| Figure 3 View of the three-dimensional Hirshfeld surface of (1) plotted over dnorm in the range from −0.15 to 1.46 a.u. |
| Figure 4 Two-dimensional fingerprint plots for (1), showing (a) all interactions, and (b)–(j), delineated into the various contact types. The di and de values are the closest internal and external distances (in Å) from the given points on the Hirshfeld surface. |
5. Synthesis and crystallization
Compound 1 was obtained according to the method (Fig. 5
) described by us earlier (Akishina et al., 2025
). A mixture of 3-hydroxybenzaldehyde (3) (0.30 g, 2.5 mmol) and 2-naphthol (4) (0.72 g, 5.0 mmol) in the presence of 1.8 g of FIBAN K-1 was boiled in trichloroethylene (90 ml) with a Dean–Stark trap for 30 min. The catalyst was filtered off using a sintered glass filter, washed with trichloroethylene (50 ml), and the solvent was completely removed under reduced pressure. The residue was washed with 40 ml of water–ethanol mixture (1:1), the product was filtered off and dried in vacuum over P2O5. Nicotinic acid chloride hydrochloride (0.45 g, 2.5 mmol) was added with stirring to the xanthenyl-substituted phenol (2) (0.86 g, 2.3 mmol) and triethylamine (0.51 g, 5 mmol) in dichloromethane (50 ml). The reaction mixture was stirred for 1 h and left for 15 h at room temperature, washed with water and NaHCO3 solution. The organic layer was separated, dried over Na2SO4 and filtered. The solvent was evaporated, the product was isolated by low-temperature recrystallization from a mixture of ethyl acetate and hexane to give 1 as yellow solid (0.50 g, 65%). m.p. 470–471 K. Yellow crystals of (1) suitable for single-crystal X-ray diffraction study were obtained from ethyl acetate solution by slow evaporation at room temperature.
| | Figure 5 The reaction scheme for obtaining compound (1). FIBAN K1 is a fibrous sulfonic cation-exchange resin containing strongly acidic sulfonic acid (–SO3H) functional groups immobilized on a polymeric matrix. |
6. Refinement
Crystal data, data collection and structure details are summarized in Table 2
. The C-bound hydrogen-atom positions were calculated geometrically at distances of 1.00 (for methine CH) and 0.95 (for aromatic CH) and refined using a riding model by applying the constraint Uiso(H) = 1.2Ueq(C).
|
Supporting information
CCDC reference: 2543051
contains datablocks I, global. DOI: https://doi.org/10.1107/S2056989026003415/hb8205sup1.cif
Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S2056989026003415/hb8205Isup3.hkl
Spectroscopic data (IR and NMR). DOI: https://doi.org/10.1107/S2056989026003415/hb8205sup4.docx
Supporting information file. DOI: https://doi.org/10.1107/S2056989026003415/hb8205Isup4.cml
| C33H21NO3 | Z = 2 |
| Mr = 479.51 | F(000) = 500 |
| Triclinic, P1 | Dx = 1.366 Mg m−3 |
| a = 9.6572 (6) Å | Mo Kα radiation, λ = 0.71073 Å |
| b = 11.0020 (7) Å | Cell parameters from 5269 reflections |
| c = 12.2442 (8) Å | θ = 2.5–30.1° |
| α = 90.489 (2)° | µ = 0.09 mm−1 |
| β = 100.530 (2)° | T = 100 K |
| γ = 113.735 (2)° | Bulk, yellow |
| V = 1165.95 (13) Å3 | 0.36 × 0.32 × 0.20 mm |
| Bruker Kappa APEXII area-detector diffractometer | 4957 reflections with I > 2σ(I) |
| φ and ω scans | Rint = 0.038 |
| Absorption correction: multi-scan (SADABS; Krause et al., 2015) | θmax = 30.0°, θmin = 3.7° |
| Tmin = 0.909, Tmax = 1.000 | h = −13→13 |
| 25901 measured reflections | k = −15→15 |
| 6803 independent reflections | l = −17→17 |
| Refinement on F2 | 0 restraints |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| R[F2 > 2σ(F2)] = 0.050 | H-atom parameters constrained |
| wR(F2) = 0.130 | w = 1/[σ2(Fo2) + (0.0569P)2 + 0.312P] where P = (Fo2 + 2Fc2)/3 |
| S = 1.04 | (Δ/σ)max = 0.001 |
| 6803 reflections | Δρmax = 0.36 e Å−3 |
| 334 parameters | Δρmin = −0.27 e Å−3 |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| x | y | z | Uiso*/Ueq | ||
| O1 | 0.35504 (11) | 0.18818 (10) | 0.59813 (8) | 0.0178 (2) | |
| O2 | 0.22229 (13) | 0.30643 (11) | 0.52367 (9) | 0.0268 (3) | |
| O7 | 0.87923 (11) | 0.80476 (10) | 0.97585 (8) | 0.0197 (2) | |
| N33 | −0.03797 (14) | −0.00447 (13) | 0.27362 (10) | 0.0240 (3) | |
| C1 | 0.47627 (15) | 0.69861 (14) | 0.63629 (11) | 0.0178 (3) | |
| H1 | 0.507002 | 0.636540 | 0.604908 | 0.021* | |
| C2 | 0.35290 (17) | 0.71924 (16) | 0.57853 (13) | 0.0231 (3) | |
| H2 | 0.300122 | 0.672290 | 0.507435 | 0.028* | |
| C3 | 0.30411 (18) | 0.80943 (17) | 0.62389 (14) | 0.0273 (3) | |
| H3 | 0.217241 | 0.821732 | 0.584117 | 0.033* | |
| C4 | 0.38106 (18) | 0.87912 (16) | 0.72467 (13) | 0.0264 (3) | |
| H4 | 0.347351 | 0.940087 | 0.754325 | 0.032* | |
| C4A | 0.51087 (17) | 0.86235 (14) | 0.78630 (12) | 0.0205 (3) | |
| C5 | 0.59429 (18) | 0.93596 (15) | 0.89061 (12) | 0.0228 (3) | |
| H5 | 0.564331 | 0.999844 | 0.919788 | 0.027* | |
| C6 | 0.71636 (17) | 0.91648 (14) | 0.94940 (12) | 0.0208 (3) | |
| H6 | 0.772106 | 0.967046 | 1.018663 | 0.025* | |
| C6A | 0.75951 (15) | 0.81993 (14) | 0.90623 (11) | 0.0166 (3) | |
| C7A | 0.94857 (15) | 0.73190 (14) | 0.93320 (11) | 0.0165 (3) | |
| C8 | 1.08433 (16) | 0.73893 (15) | 1.00455 (12) | 0.0211 (3) | |
| H8 | 1.119154 | 0.788960 | 1.075283 | 0.025* | |
| C9 | 1.16494 (16) | 0.67390 (16) | 0.97169 (12) | 0.0220 (3) | |
| H9 | 1.255257 | 0.677073 | 1.020378 | 0.026* | |
| C9A | 1.11560 (15) | 0.60092 (14) | 0.86498 (11) | 0.0176 (3) | |
| C10 | 1.20082 (16) | 0.53526 (16) | 0.82859 (12) | 0.0214 (3) | |
| H10 | 1.292321 | 0.539734 | 0.876516 | 0.026* | |
| C11 | 1.15424 (17) | 0.46559 (15) | 0.72602 (12) | 0.0217 (3) | |
| H11 | 1.211989 | 0.421020 | 0.703401 | 0.026* | |
| C12 | 1.01996 (16) | 0.46040 (14) | 0.65411 (12) | 0.0197 (3) | |
| H12 | 0.988203 | 0.413047 | 0.582357 | 0.024* | |
| C13 | 0.93423 (15) | 0.52296 (14) | 0.68640 (11) | 0.0163 (3) | |
| H13 | 0.844413 | 0.518777 | 0.636413 | 0.020* | |
| C13A | 0.97798 (14) | 0.59385 (13) | 0.79350 (11) | 0.0148 (3) | |
| C13B | 0.89072 (14) | 0.65936 (13) | 0.83093 (10) | 0.0135 (2) | |
| C14 | 0.73410 (14) | 0.64189 (13) | 0.76384 (10) | 0.0133 (2) | |
| H14 | 0.741961 | 0.652772 | 0.683900 | 0.016* | |
| C14A | 0.68637 (15) | 0.74707 (13) | 0.80519 (11) | 0.0142 (3) | |
| C14B | 0.55874 (15) | 0.76831 (13) | 0.74202 (11) | 0.0156 (3) | |
| C15 | 0.24985 (15) | 0.20929 (14) | 0.51993 (11) | 0.0168 (3) | |
| C21 | 0.61320 (14) | 0.50198 (13) | 0.77181 (10) | 0.0125 (2) | |
| C22 | 0.53824 (14) | 0.40936 (13) | 0.67892 (11) | 0.0141 (2) | |
| H22 | 0.561787 | 0.431881 | 0.607783 | 0.017* | |
| C23 | 0.42918 (14) | 0.28426 (13) | 0.69094 (11) | 0.0145 (3) | |
| C24 | 0.39272 (15) | 0.24641 (14) | 0.79284 (11) | 0.0163 (3) | |
| H24 | 0.318413 | 0.159754 | 0.799487 | 0.020* | |
| C25 | 0.46809 (15) | 0.33900 (14) | 0.88559 (11) | 0.0164 (3) | |
| H25 | 0.445026 | 0.315436 | 0.956668 | 0.020* | |
| C26 | 0.57622 (15) | 0.46498 (13) | 0.87525 (11) | 0.0149 (3) | |
| H26 | 0.626011 | 0.527182 | 0.939294 | 0.018* | |
| C31 | 0.17384 (15) | 0.09795 (14) | 0.42980 (11) | 0.0166 (3) | |
| C32 | 0.04136 (16) | 0.09133 (15) | 0.35726 (12) | 0.0197 (3) | |
| H32 | 0.005382 | 0.158391 | 0.367709 | 0.024* | |
| C34 | 0.01715 (17) | −0.09640 (16) | 0.26070 (12) | 0.0248 (3) | |
| H34 | −0.038313 | −0.166011 | 0.202481 | 0.030* | |
| C35 | 0.14949 (18) | −0.09653 (15) | 0.32658 (12) | 0.0247 (3) | |
| H35 | 0.184537 | −0.163285 | 0.312578 | 0.030* | |
| C36 | 0.23056 (17) | 0.00303 (14) | 0.41390 (12) | 0.0203 (3) | |
| H36 | 0.321792 | 0.005858 | 0.461068 | 0.024* |
| U11 | U22 | U33 | U12 | U13 | U23 | |
| O1 | 0.0187 (5) | 0.0137 (5) | 0.0165 (5) | 0.0047 (4) | −0.0019 (4) | −0.0035 (4) |
| O2 | 0.0337 (6) | 0.0250 (6) | 0.0225 (5) | 0.0176 (5) | −0.0046 (4) | −0.0069 (4) |
| O7 | 0.0228 (5) | 0.0195 (5) | 0.0163 (5) | 0.0096 (4) | 0.0012 (4) | −0.0056 (4) |
| N33 | 0.0182 (6) | 0.0237 (7) | 0.0209 (6) | 0.0005 (5) | 0.0014 (5) | −0.0035 (5) |
| C1 | 0.0171 (6) | 0.0177 (7) | 0.0207 (7) | 0.0086 (6) | 0.0058 (5) | 0.0034 (5) |
| C2 | 0.0210 (7) | 0.0278 (8) | 0.0235 (7) | 0.0129 (6) | 0.0048 (6) | 0.0063 (6) |
| C3 | 0.0255 (7) | 0.0337 (9) | 0.0321 (8) | 0.0205 (7) | 0.0084 (6) | 0.0126 (7) |
| C4 | 0.0323 (8) | 0.0280 (9) | 0.0326 (8) | 0.0227 (7) | 0.0150 (7) | 0.0101 (7) |
| C4A | 0.0249 (7) | 0.0183 (7) | 0.0251 (7) | 0.0122 (6) | 0.0133 (6) | 0.0077 (6) |
| C5 | 0.0332 (8) | 0.0167 (7) | 0.0266 (8) | 0.0141 (6) | 0.0164 (6) | 0.0033 (6) |
| C6 | 0.0295 (7) | 0.0142 (7) | 0.0196 (7) | 0.0076 (6) | 0.0105 (6) | −0.0002 (5) |
| C6A | 0.0186 (6) | 0.0142 (7) | 0.0168 (6) | 0.0055 (5) | 0.0062 (5) | 0.0016 (5) |
| C7A | 0.0164 (6) | 0.0141 (7) | 0.0172 (6) | 0.0044 (5) | 0.0037 (5) | −0.0003 (5) |
| C8 | 0.0194 (7) | 0.0229 (8) | 0.0159 (6) | 0.0054 (6) | −0.0009 (5) | −0.0025 (5) |
| C9 | 0.0158 (6) | 0.0274 (8) | 0.0192 (7) | 0.0078 (6) | −0.0025 (5) | 0.0001 (6) |
| C9A | 0.0156 (6) | 0.0189 (7) | 0.0176 (6) | 0.0064 (5) | 0.0032 (5) | 0.0033 (5) |
| C10 | 0.0170 (6) | 0.0263 (8) | 0.0230 (7) | 0.0116 (6) | 0.0029 (5) | 0.0046 (6) |
| C11 | 0.0223 (7) | 0.0230 (8) | 0.0256 (7) | 0.0133 (6) | 0.0090 (6) | 0.0048 (6) |
| C12 | 0.0196 (6) | 0.0199 (7) | 0.0197 (7) | 0.0082 (6) | 0.0041 (5) | −0.0007 (5) |
| C13 | 0.0146 (6) | 0.0169 (7) | 0.0173 (6) | 0.0066 (5) | 0.0025 (5) | 0.0001 (5) |
| C13A | 0.0130 (6) | 0.0131 (7) | 0.0161 (6) | 0.0033 (5) | 0.0026 (5) | 0.0018 (5) |
| C13B | 0.0123 (5) | 0.0125 (6) | 0.0139 (6) | 0.0035 (5) | 0.0020 (5) | 0.0014 (5) |
| C14 | 0.0134 (6) | 0.0130 (6) | 0.0130 (6) | 0.0048 (5) | 0.0031 (5) | −0.0006 (5) |
| C14A | 0.0154 (6) | 0.0108 (6) | 0.0169 (6) | 0.0043 (5) | 0.0071 (5) | 0.0026 (5) |
| C14B | 0.0172 (6) | 0.0129 (6) | 0.0187 (6) | 0.0061 (5) | 0.0083 (5) | 0.0049 (5) |
| C15 | 0.0176 (6) | 0.0167 (7) | 0.0146 (6) | 0.0052 (5) | 0.0038 (5) | −0.0002 (5) |
| C21 | 0.0111 (5) | 0.0118 (6) | 0.0150 (6) | 0.0054 (5) | 0.0021 (5) | 0.0011 (5) |
| C22 | 0.0150 (6) | 0.0140 (6) | 0.0134 (6) | 0.0061 (5) | 0.0025 (5) | −0.0001 (5) |
| C23 | 0.0141 (6) | 0.0126 (6) | 0.0154 (6) | 0.0055 (5) | −0.0005 (5) | −0.0029 (5) |
| C24 | 0.0148 (6) | 0.0123 (7) | 0.0203 (7) | 0.0042 (5) | 0.0035 (5) | 0.0016 (5) |
| C25 | 0.0176 (6) | 0.0159 (7) | 0.0156 (6) | 0.0061 (5) | 0.0052 (5) | 0.0027 (5) |
| C26 | 0.0154 (6) | 0.0146 (7) | 0.0139 (6) | 0.0059 (5) | 0.0019 (5) | −0.0010 (5) |
| C31 | 0.0166 (6) | 0.0148 (7) | 0.0139 (6) | 0.0012 (5) | 0.0043 (5) | −0.0006 (5) |
| C32 | 0.0166 (6) | 0.0191 (7) | 0.0194 (7) | 0.0031 (6) | 0.0041 (5) | −0.0007 (5) |
| C34 | 0.0245 (7) | 0.0199 (8) | 0.0209 (7) | 0.0002 (6) | 0.0040 (6) | −0.0060 (6) |
| C35 | 0.0294 (8) | 0.0176 (8) | 0.0237 (7) | 0.0068 (6) | 0.0044 (6) | −0.0040 (6) |
| C36 | 0.0214 (7) | 0.0161 (7) | 0.0192 (7) | 0.0046 (6) | 0.0019 (5) | −0.0003 (5) |
| O1—C15 | 1.3567 (16) | C10—H10 | 0.9500 |
| O1—C23 | 1.4122 (15) | C11—C12 | 1.408 (2) |
| O2—C15 | 1.2032 (17) | C11—H11 | 0.9500 |
| O7—C6A | 1.3743 (16) | C12—C13 | 1.3745 (17) |
| O7—C7A | 1.3844 (15) | C12—H12 | 0.9500 |
| N33—C32 | 1.3384 (18) | C13—C13A | 1.4216 (18) |
| N33—C34 | 1.339 (2) | C13—H13 | 0.9500 |
| C1—C2 | 1.3725 (19) | C13A—C13B | 1.4367 (17) |
| C1—C14B | 1.4187 (19) | C13B—C14 | 1.5194 (17) |
| C1—H1 | 0.9500 | C14—C14A | 1.5208 (17) |
| C2—C3 | 1.406 (2) | C14—C21 | 1.5295 (18) |
| C2—H2 | 0.9500 | C14—H14 | 1.0000 |
| C3—C4 | 1.361 (2) | C14A—C14B | 1.4347 (18) |
| C3—H3 | 0.9500 | C15—C31 | 1.4880 (18) |
| C4—C4A | 1.420 (2) | C21—C22 | 1.3933 (17) |
| C4—H4 | 0.9500 | C21—C26 | 1.3981 (17) |
| C4A—C5 | 1.420 (2) | C22—C23 | 1.3851 (19) |
| C4A—C14B | 1.4301 (18) | C22—H22 | 0.9500 |
| C5—C6 | 1.360 (2) | C23—C24 | 1.3805 (18) |
| C5—H5 | 0.9500 | C24—C25 | 1.3922 (18) |
| C6—C6A | 1.4172 (18) | C24—H24 | 0.9500 |
| C6—H6 | 0.9500 | C25—C26 | 1.3834 (19) |
| C6A—C14A | 1.3711 (18) | C25—H25 | 0.9500 |
| C7A—C13B | 1.3731 (18) | C26—H26 | 0.9500 |
| C7A—C8 | 1.4095 (19) | C31—C36 | 1.3872 (19) |
| C8—C9 | 1.356 (2) | C31—C32 | 1.3926 (19) |
| C8—H8 | 0.9500 | C32—H32 | 0.9500 |
| C9—C9A | 1.4232 (19) | C34—C35 | 1.382 (2) |
| C9—H9 | 0.9500 | C34—H34 | 0.9500 |
| C9A—C10 | 1.4159 (18) | C35—C36 | 1.393 (2) |
| C9A—C13A | 1.4243 (18) | C35—H35 | 0.9500 |
| C10—C11 | 1.366 (2) | C36—H36 | 0.9500 |
| C15—O1—C23 | 116.74 (10) | C9A—C13A—C13B | 119.39 (12) |
| C6A—O7—C7A | 117.96 (10) | C7A—C13B—C13A | 117.87 (12) |
| C32—N33—C34 | 116.56 (13) | C7A—C13B—C14 | 120.54 (11) |
| C2—C1—C14B | 121.20 (12) | C13A—C13B—C14 | 121.46 (11) |
| C2—C1—H1 | 119.4 | C13B—C14—C14A | 110.45 (10) |
| C14B—C1—H1 | 119.4 | C13B—C14—C21 | 110.01 (10) |
| C1—C2—C3 | 120.43 (14) | C14A—C14—C21 | 110.47 (10) |
| C1—C2—H2 | 119.8 | C13B—C14—H14 | 108.6 |
| C3—C2—H2 | 119.8 | C14A—C14—H14 | 108.6 |
| C4—C3—C2 | 120.15 (14) | C21—C14—H14 | 108.6 |
| C4—C3—H3 | 119.9 | C6A—C14A—C14B | 118.13 (11) |
| C2—C3—H3 | 119.9 | C6A—C14A—C14 | 120.92 (11) |
| C3—C4—C4A | 121.19 (13) | C14B—C14A—C14 | 120.88 (11) |
| C3—C4—H4 | 119.4 | C1—C14B—C4A | 118.03 (12) |
| C4A—C4—H4 | 119.4 | C1—C14B—C14A | 122.43 (11) |
| C5—C4A—C4 | 121.98 (13) | C4A—C14B—C14A | 119.54 (12) |
| C5—C4A—C14B | 119.05 (13) | O2—C15—O1 | 123.75 (12) |
| C4—C4A—C14B | 118.97 (13) | O2—C15—C31 | 124.61 (13) |
| C6—C5—C4A | 121.07 (12) | O1—C15—C31 | 111.64 (11) |
| C6—C5—H5 | 119.5 | C22—C21—C26 | 118.58 (12) |
| C4A—C5—H5 | 119.5 | C22—C21—C14 | 122.07 (11) |
| C5—C6—C6A | 119.29 (13) | C26—C21—C14 | 119.35 (11) |
| C5—C6—H6 | 120.4 | C23—C22—C21 | 119.59 (12) |
| C6A—C6—H6 | 120.4 | C23—C22—H22 | 120.2 |
| C14A—C6A—O7 | 123.36 (11) | C21—C22—H22 | 120.2 |
| C14A—C6A—C6 | 122.87 (13) | C24—C23—C22 | 122.27 (12) |
| O7—C6A—C6 | 113.75 (12) | C24—C23—O1 | 117.43 (12) |
| C13B—C7A—O7 | 123.25 (12) | C22—C23—O1 | 120.26 (11) |
| C13B—C7A—C8 | 122.98 (12) | C23—C24—C25 | 118.03 (13) |
| O7—C7A—C8 | 113.77 (11) | C23—C24—H24 | 121.0 |
| C9—C8—C7A | 119.63 (13) | C25—C24—H24 | 121.0 |
| C9—C8—H8 | 120.2 | C26—C25—C24 | 120.65 (12) |
| C7A—C8—H8 | 120.2 | C26—C25—H25 | 119.7 |
| C8—C9—C9A | 120.66 (13) | C24—C25—H25 | 119.7 |
| C8—C9—H9 | 119.7 | C25—C26—C21 | 120.87 (12) |
| C9A—C9—H9 | 119.7 | C25—C26—H26 | 119.6 |
| C10—C9A—C9 | 121.21 (12) | C21—C26—H26 | 119.6 |
| C10—C9A—C13A | 119.42 (12) | C36—C31—C32 | 119.05 (13) |
| C9—C9A—C13A | 119.37 (12) | C36—C31—C15 | 123.06 (12) |
| C11—C10—C9A | 121.39 (13) | C32—C31—C15 | 117.88 (12) |
| C11—C10—H10 | 119.3 | N33—C32—C31 | 123.51 (13) |
| C9A—C10—H10 | 119.3 | N33—C32—H32 | 118.2 |
| C10—C11—C12 | 119.46 (12) | C31—C32—H32 | 118.2 |
| C10—C11—H11 | 120.3 | N33—C34—C35 | 124.22 (13) |
| C12—C11—H11 | 120.3 | N33—C34—H34 | 117.9 |
| C13—C12—C11 | 120.85 (13) | C35—C34—H34 | 117.9 |
| C13—C12—H12 | 119.6 | C34—C35—C36 | 118.76 (14) |
| C11—C12—H12 | 119.6 | C34—C35—H35 | 120.6 |
| C12—C13—C13A | 120.98 (12) | C36—C35—H35 | 120.6 |
| C12—C13—H13 | 119.5 | C31—C36—C35 | 117.88 (13) |
| C13A—C13—H13 | 119.5 | C31—C36—H36 | 121.1 |
| C13—C13A—C9A | 117.87 (11) | C35—C36—H36 | 121.1 |
| C13—C13A—C13B | 122.73 (12) | ||
| C14B—C1—C2—C3 | −0.8 (2) | C6—C6A—C14A—C14 | −178.33 (12) |
| C1—C2—C3—C4 | 1.4 (2) | C13B—C14—C14A—C6A | −15.41 (17) |
| C2—C3—C4—C4A | −0.3 (2) | C21—C14—C14A—C6A | 106.54 (14) |
| C3—C4—C4A—C5 | 178.83 (14) | C13B—C14—C14A—C14B | 167.62 (11) |
| C3—C4—C4A—C14B | −1.3 (2) | C21—C14—C14A—C14B | −70.44 (15) |
| C4—C4A—C5—C6 | 178.65 (14) | C2—C1—C14B—C4A | −0.8 (2) |
| C14B—C4A—C5—C6 | −1.2 (2) | C2—C1—C14B—C14A | 178.87 (13) |
| C4A—C5—C6—C6A | −0.8 (2) | C5—C4A—C14B—C1 | −178.31 (12) |
| C7A—O7—C6A—C14A | 12.85 (19) | C4—C4A—C14B—C1 | 1.8 (2) |
| C7A—O7—C6A—C6 | −168.24 (12) | C5—C4A—C14B—C14A | 2.0 (2) |
| C5—C6—C6A—C14A | 2.1 (2) | C4—C4A—C14B—C14A | −177.87 (13) |
| C5—C6—C6A—O7 | −176.83 (12) | C6A—C14A—C14B—C1 | 179.54 (12) |
| C6A—O7—C7A—C13B | −9.29 (19) | C14—C14A—C14B—C1 | −3.40 (19) |
| C6A—O7—C7A—C8 | 170.75 (12) | C6A—C14A—C14B—C4A | −0.78 (19) |
| C13B—C7A—C8—C9 | 1.2 (2) | C14—C14A—C14B—C4A | 176.28 (12) |
| O7—C7A—C8—C9 | −178.81 (13) | C23—O1—C15—O2 | 3.13 (19) |
| C7A—C8—C9—C9A | 1.3 (2) | C23—O1—C15—C31 | −176.91 (10) |
| C8—C9—C9A—C10 | 178.45 (14) | C13B—C14—C21—C22 | −115.74 (12) |
| C8—C9—C9A—C13A | −1.5 (2) | C14A—C14—C21—C22 | 122.06 (12) |
| C9—C9A—C10—C11 | −179.70 (14) | C13B—C14—C21—C26 | 64.17 (14) |
| C13A—C9A—C10—C11 | 0.3 (2) | C14A—C14—C21—C26 | −58.03 (15) |
| C9A—C10—C11—C12 | 0.9 (2) | C26—C21—C22—C23 | 0.39 (18) |
| C10—C11—C12—C13 | −0.9 (2) | C14—C21—C22—C23 | −179.70 (11) |
| C11—C12—C13—C13A | −0.5 (2) | C21—C22—C23—C24 | −0.92 (19) |
| C12—C13—C13A—C9A | 1.7 (2) | C21—C22—C23—O1 | −178.41 (11) |
| C12—C13—C13A—C13B | −179.31 (13) | C15—O1—C23—C24 | 110.45 (13) |
| C10—C9A—C13A—C13 | −1.6 (2) | C15—O1—C23—C22 | −71.93 (15) |
| C9—C9A—C13A—C13 | 178.43 (13) | C22—C23—C24—C25 | 0.73 (19) |
| C10—C9A—C13A—C13B | 179.37 (12) | O1—C23—C24—C25 | 178.29 (11) |
| C9—C9A—C13A—C13B | −0.6 (2) | C23—C24—C25—C26 | −0.03 (19) |
| O7—C7A—C13B—C13A | 176.69 (12) | C24—C25—C26—C21 | −0.47 (19) |
| C8—C7A—C13B—C13A | −3.3 (2) | C22—C21—C26—C25 | 0.29 (18) |
| O7—C7A—C13B—C14 | −7.4 (2) | C14—C21—C26—C25 | −179.62 (11) |
| C8—C7A—C13B—C14 | 172.59 (13) | O2—C15—C31—C36 | 165.16 (14) |
| C13—C13A—C13B—C7A | −176.04 (13) | O1—C15—C31—C36 | −14.80 (18) |
| C9A—C13A—C13B—C7A | 2.98 (19) | O2—C15—C31—C32 | −13.6 (2) |
| C13—C13A—C13B—C14 | 8.1 (2) | O1—C15—C31—C32 | 166.49 (11) |
| C9A—C13A—C13B—C14 | −172.91 (12) | C34—N33—C32—C31 | −0.7 (2) |
| C7A—C13B—C14—C14A | 18.63 (17) | C36—C31—C32—N33 | 1.8 (2) |
| C13A—C13B—C14—C14A | −165.59 (11) | C15—C31—C32—N33 | −179.43 (13) |
| C7A—C13B—C14—C21 | −103.59 (14) | C32—N33—C34—C35 | −0.9 (2) |
| C13A—C13B—C14—C21 | 72.20 (14) | N33—C34—C35—C36 | 1.4 (2) |
| O7—C6A—C14A—C14B | 177.54 (12) | C32—C31—C36—C35 | −1.2 (2) |
| C6—C6A—C14A—C14B | −1.3 (2) | C15—C31—C36—C35 | −179.93 (13) |
| O7—C6A—C14A—C14 | 0.5 (2) | C34—C35—C36—C31 | −0.2 (2) |
| Cg4 and Cg7 are the centroids of the C4A/C5/C6/C6A/C14A/C14bB and C21–C26 rings, respectively. |
| D—H···A | D—H | H···A | D···A | D—H···A |
| C24—H24···N33i | 0.95 | 2.53 | 3.3298 (18) | 142 |
| C11—H11···O2ii | 0.95 | 2.56 | 3.329 (2) | 138 |
| C11—H11···Cg7iii | 0.95 | 3.05 | 3.8352 (19) | 142 |
| C25—H25···Cg4iv | 0.95 | 3.01 | 3.9301 (15) | 162 |
| Symmetry codes: (i) −x, −y, −z+1; (ii) x+1, y, z; (iii) x−1, y, z; (iv) −x+1, −y+1, −z. |
Acknowledgements
The authors' contributions are as follows. Conceptualization, ANB and TH; synthesis, EAA and AAK; X-ray analysis, MSG, VIS and TH; Hirshfeld surface analysis, TH; writing (review and editing of the manuscript) KIH and TH; supervision, TH and ANB.
Funding information
Funding for this research was provided by the Belarusian Republican Foundation for Fundamental Research (project No. X23RNF-051). This work was also supported by the Azerbaijan Medical University. TH is grateful to Hacettepe University Scientific Research Project Unit (grant No. 013 D04 602 004).
References
Akishina, E. A., Dikusar, E. A., Lysenko, G. N., Aharodnikava, M. M., Hliavitskaya, T. A., Polikarpov, A. P. & Potkin, V. I. (2025). Russ. J. Gen. Chem. 95, 1559–1568. Web of Science CrossRef CAS Google Scholar
Akishina, E. A., Dikusar, E. A., Polikarpov, A. P., Alekseeva, K. A., Menshikova, D. I., Kurman, P. V. & Potkin, V. I. (2023). Russ. J. Gen. Chem. 93, 463–475. Web of Science CrossRef CAS Google Scholar
Akishina, E. A., Kornoushenko, Yu. V., Andrianov, A. M., Terpinskaya, T. I., Grigoriev, M. S., Dikusar, E. A., Kolesnik, I. A., Nikitina, E. V., Zubkov, F. I., Zhou, H. & Potkin, V. I. (2026). Tetrahedron 195, 135199. Web of Science CSD CrossRef Google Scholar
Amininasab, S. M., Esmaili, S. & Shami, Z. (2020). J. Macromol. Sci. Part A 57, 35–45. Web of Science CrossRef CAS Google Scholar
Brøndsted, F. & Stains, C. I. (2024). Chem. Eur. J. 30, e202400598. Web of Science PubMed Google Scholar
Bruker (2021). APEX4 and SAINT. Bruker AXS, Madison, Wisconsin, USA. Google Scholar
Etter, M. C., MacDonald, J. C. & Bernstein, J. (1990). Acta Cryst. B46, 256–262. CrossRef ICSD CAS Web of Science IUCr Journals Google Scholar
Ji, S., Du, Y., Leng, J., Zhang, Y. & Hu, W. (2024). Int. J. Mol. Sci. 25, 12365. Web of Science CrossRef PubMed Google Scholar
Karaman, O., Alkan, G. A., Kizilenis, C., Akgul, C. C. & Gunbas, G. (2023). Coord. Chem. Rev. 475, 214841. Web of Science CrossRef Google Scholar
Krause, L., Herbst-Irmer, R., Sheldrick, G. M. & Stalke, D. (2015). J. Appl. Cryst. 48, 3–10. Web of Science CSD CrossRef ICSD CAS IUCr Journals Google Scholar
Rawat, S., Mishra, S. R., Nikam, R. R. & Nagaraja, B. M. (2025). J. Alloys Compd. 1040, 183615. Web of Science CrossRef Google Scholar
Reddi Mohan Naidu, K., Satheesh Krishna, B., Anil Kumar, M., Arulselvan, P., Ibrahim Khalivulla, S. & Lasekan, O. (2012). Molecules 17, 7543–7555. Web of Science CrossRef PubMed Google Scholar
Sheldrick, G. M. (2015a). Acta Cryst. A71, 3–8. Web of Science CrossRef IUCr Journals Google Scholar
Sheldrick, G. M. (2015b). Acta Cryst. C71, 3–8. Web of Science CrossRef IUCr Journals Google Scholar
Sim, G. A., Robertson, J. M. & Goodwin, T. H. (1955). Acta Cryst. 8, 157–164. CSD CrossRef IUCr Journals Web of Science Google Scholar
Smolobochkin, A., Niyazova, D., Gazizov, A., Syzdykbayev, M., Voloshina, A., Amerhanova, S., Lyubina, A., Neganova, M., Aleksandrova, Y., Babaeva, O., Voronina, J., Appazov, N., Sinyashin, O., Alabugin, I., Burilov, A. & Pudovik, M. (2024). Int. J. Mol. Sci. 25, 6724. Web of Science CrossRef PubMed Google Scholar
Spackman, P. R., Turner, M. J., McKinnon, J. J., Wolff, S. K., Grimwood, D. J., Jayatilaka, D. & Spackman, M. A. (2021). J. Appl. Cryst. 54, 1006–1011. Web of Science CrossRef CAS IUCr Journals Google Scholar
Tacar, O., Sriamornsak, P. & Dass, C. R. (2013). J. Pharm. Pharmacol. 65, 157–170. Web of Science CrossRef CAS PubMed Google Scholar
Wang, K., Zhang, J., de Sousa Júnior, W. T., da Silva, V. C. M., Rodrigues, M. C., Morais, J. A. V., Jiang, C., Longo, J. P. F., Azevedo, R. B. & Muehlmann, L. A. (2020). J. Biomater. Sci. Polym. Ed. 31, 1977–1993. Web of Science CrossRef CAS PubMed Google Scholar
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