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ISSN: 2056-9890

Crystal and mol­ecular structures of datiscetin and its monohydrate isolated from Datisca cannabina L.

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aS. Yunusov Institute of the Chemistry of Plant Substances, Academy of Sciences of Uzbekistan, Mirzo Ulugbek Str. 77, Tashkent 100170, Uzbekistan
*Correspondence e-mail: [email protected]

Edited by X. Hao, Institute of Chemistry, Chinese Academy of Sciences (Received 10 April 2026; accepted 17 April 2026; online 29 April 2026)

The crystal structures of the flavonoid datiscetin [3,5,7-trihy­droxy-2-(2-hy­droxy­phen­yl)chromen-4-one], C15H10O6, and its monohydrate, C15H10O6·H2O, were determined by single-crystal X-ray diffraction analysis. The flavonoid was isolated from the ethyl acetate fraction of Datisca cannabina L. collected in Tashkent region, Uzbekistan. In both structures, the chromenone ring system and the phenyl ring form nearly the same dihedral angles (38.3 and 38.7° for the anhydrate and monohydrate, respectively). In addition, in both structures, the mol­ecules stack through ππ inter­actions along the shortest translation axis of the unit cell [3.7601 (1) and 3.9274 (5) Å, respectively], resulting in the formation of needle-shaped single crystals.

1. Chemical context

Datisca cannabina L. (commonly known as false hemp) is a shrub of the family Datiscaceae that resembles hemp (Cannabis sativa L.) in many aspects, including its general morphology and the arrangement of its leaves. It is a robust single genus of perennial plant that reaches up to 1–2 m in height and is predominantly found in riparian environments (Holmes & Blizzard, 2010View full citation; Bohmer et al., 2002View full citation). The family Datiscaceae includes three genera and four species, the genus Datisca consists of two species: D. glomerata (Presl) Baill., found in California, and D. cannabina L., which grows in the area from southwest Asia to Crete (Christopher, 1973View full citation). The aerial parts of the plant are rich in biologically active com­pounds, including flavonoids (17%), tannins (2.9%), cou­marins (0.9–1.5%) and alkaloids (0.31%). Datisca cannabina L. is used as a medicinal raw material in the production of Datiscan, a preparation containing a com­plex of flavonoids. This formulation is recommended as part of combination therapy for digestive disorders, including gastric ailments, scrofulous conditions and gastrointestinal diseases accom­panied by smooth muscle spasms. In traditional medicine, infusions and decoctions prepared from the aerial parts of the plant are employed as diuretics, expectorants and laxatives. Moreover, the plant has been reported to exhibit a range of biological activities, such as anti­oxidant, anti-inflammatory, anti­bacterial and anti­carcinogenic properties (Ahmad et al., 2008View full citation). Additionally, the roots are used for obtaining a yellow dye for colouring wool and silk, while the stems provide bast fiber suitable for netting (Muhammed et al., 2012View full citation). In this work, we report the crystal structures of datiscetin (I) and its monohydrate (II) isolated from Datisca cannabina L.

[Scheme 1]

2. Structural commentary

Solvent (hydrate)-free crystals (I) of datiscetin were obtained from a chloro­form–methanol (7:3 v/v) mixture. The mol­ecular structure of datiscetin is shown in Fig. 1[link]. The chromenone ring system and the phenyl ring are planar, with r.m.s. deviations of 0.008 and 0.005 Å, respectively, and the dihedral angle between them is 38.3°. The torsion angle between these two rings is stabilized by an intra­molecular O6—H6⋯O2 hy­dro­gen bond formed between the hydroxyl group of the phenyl ring and the hydroxyl group located at position 3 [2.625 (2) Å and 155 (3)°]. The hydroxyl group at position 5 in the mol­ecule also forms an intra­molecular O4—H4⋯O3 hy­dro­gen bond with the carbonyl group [2.631 (2) Å and 155 (3)°] Table 1[link].

Table 1
Hydrogen-bond geometry (Å, °) for I[link]

D—H⋯A D—H H⋯A DA D—H⋯A
O2—H2⋯O3i 0.85 (3) 1.85 (3) 2.6094 (18) 147 (3)
O4—H4⋯O3 0.91 (3) 1.78 (3) 2.631 (2) 155 (3)
O5—H5⋯O6ii 0.91 (4) 1.98 (4) 2.7778 (19) 146 (3)
O6—H6⋯O2 0.89 (3) 1.79 (3) 2.6253 (19) 155 (3)
Symmetry codes: (i) Mathematical equation; (ii) Mathematical equation.
[Figure 1]
Figure 1
The mol­ecular structure of I. Displacement ellipsoids are drawn at the 50% probability level.

Datiscetin monohydrate crystals (II) were obtained from methanol at room temperature and crystallize in the ortho­rhom­bic space group Pna21. The asymmetric unit consists of one flavonoid mol­ecule and one water mol­ecule (Fig. 2[link]). The chromenone ring system and the phenyl ring are planar, with r.m.s. deviations of 0.015 and 0.004 Å, respectively, and the dihedral angle between them is 38.7°, which is the same as that observed in crystal form I, and is stabilized by an intra­molecular O2—H2⋯O6 hy­dro­gen bond formed between the hydroxyl group of the phenyl ring and the hydroxyl group located at position 3 [2.609 (3) Å and 153°; Table 2[link]].

Table 2
Hydrogen-bond geometry (Å, °) for II[link]

D—H⋯A D—H H⋯A DA D—H⋯A
O2—H2⋯O6 0.82 1.85 2.609 (3) 153
O4—H4⋯O3 0.82 1.91 2.639 (3) 147
O5—H5⋯O3i 0.82 2.00 2.803 (3) 166
O1W—H1WB⋯O5ii 0.85 2.76 3.281 (5) 121
O1W—H1WB⋯O5iii 0.85 2.28 2.934 (4) 134
Symmetry codes: (i) Mathematical equation; (ii) Mathematical equation; (iii) Mathematical equation.
[Figure 2]
Figure 2
The mol­ecular structure of II. Displacement ellipsoids are drawn at the 50% probability level

3. Supra­molecular features

The crystal of I possesses an inversion centre, therefore, the crystals contain ‘left' and ‘right' mol­ecules with respect to the orientation of the chromenone and phenyl rings. In crystal form I, the ‘left' and ‘right' mol­ecules related by the inversion centre form hy­dro­gen-bonded dimers through the hydroxyl at position 3 and carbonyl groups [0.85 (3), 1.86 (3), 2.6094 (19) Å and 147 (3)°]. The dimers are connected by hy­dro­gen bonds via the hydroxyl groups at position 7 and on the phenyl ring, leading to the formation of a two-dimensional supra­molecular network in the crystal (Table 1[link], Fig. 3[link]). The supra­molecules formed from ‘supercells' [Fig. 4[link](a)] are further packed along the b axis through ππ stacking inter­actions, with centroid-to-centroid distances equal to the unit-cell translation along the b axis [3.7601 (1) Å], with a slippage of 1.59 Å [Fig. 4[link](b)]. This particular stacking corresponds to the preferential growth direction during crystallization, leading to the formation of needle-shaped single crystals (Fig. 5[link]).

[Figure 3]
Figure 3
Packing of mol­ecules of I, viewed along the b axis, showing the formation of a hydrogen-bonded macrocycle consisting of six molecules.
[Figure 4]
Figure 4
(a) Formation of a hy­dro­gen-bonded network, where the hy­dro­gen-bonded rings consist of six mol­ecules of datiscetin. (b) Translation (stacking) of the network along the b axis. In both cases, the packing is shown along the [40Mathematical equation] direction.
[Figure 5]
Figure 5
Single crystal of I exhibiting a needle-like morphology.

Packing analysis of the crystal structure of II shows that flavonoid mol­ecules related by glide-plane symmetry are con­nected through an O5—H5⋯O3i hy­dro­gen bond [O5⋯O3i = 2.803 (3) Å and 166°; symmetry code: (i) x − Mathematical equation, −y + Mathematical equation, z + 1]. Water mol­ecules bridge flavonoid mol­ecules stacked along the c axis [O1W⋯ O5ii = 3.281 (5) Å and O1W⋯ O5iii = 2.934 (4) Å; symmetry codes: (ii) −x + Mathematical equation, y − Mathematical equation, z − Mathematical equation; (iii) −x + Mathematical equation, y − Mathematical equation, z − Mathematical equation] (Table 2[link], Fig. 6[link]). It should be noted that, due to the difficulty of experimentally determining the coordinates of hydrogen atoms in water molecules, the observed other short Ow⋯O distances may indicate the possible presence of alternative hydrogen bonds, not taken into account in the table

[Figure 6]
Figure 6
Packing of mol­ecules and hy­dro­gen bonding in II.

The stacking of mol­ecules along the c axis corresponds to the preferential growth direction during crystallization, resulting in the formation of conical-needle-shaped single crystals along this axis (Fig. 7[link]).

[Figure 7]
Figure 7
Single crystal of II exhibiting a conical-needle-shaped morphology.

4. Database survey

A search of the Cambridge Structural Database (CSD, Version 5.41, including the update of January 2020; Groom et al., 2016View full citation) for flavonoids with a 2-phenyl substituent yields more than 1400 hits.

5. Isolation and crystallization

5.1. Plant material

The above-ground parts (leaves, flowers and stems) of Datisca cannabina L. were collected in the Tashkent region, Uzbekistan, in October 2024, during the seed-bearing period. The species identification was confirmed by com­paring the col­lected specimen with herbarium material of Datisca cannabina L. preserved at the Central Herbarium of Uzbekistan. The taxonomic identification was carried out by A. M. Nigmatullaev, Senior Researcher at the Laboratory of Biology of Medicinal and Technical Plants, S. Yu. Yunusov Institute of the Chemistry of Plant Substances, Academy of Sciences of the Republic of Uzbekistan.

5.2. Extraction and isolation

The freshly collected air-dried powdered plant material (3.0 kg) was extracted ten times by percolation with 75% ethanol. The combined concentrated viscous extract was con­secutively partitioned with solvents of increasing polarity between chloro­form, ethyl acetate and n-butanol. The ethyl acetate fraction was adsorbed onto silica gel (1:1 v/v, 99 g) and subjected to column chromatography (165 × 4.5 cm) with stepwise elution using chloro­form and chloro­form–methanol mixtures (9:1, 8:2 and 7:3 v/v). The obtained mixture of flavonoids was further separated into individual com­pounds by mol­ecular weight using a Sephadex LH-20 column with methanol as the eluent, yielding 14.3 g of datiscetin.

5.3. NMR spectroscopy

NMR spectra were recorded on a JNM-ECZ600R spectrometer (JEOL, Japan) operating at 600 MHz for 1H and 150 MHz for 13C, using DMSO-d6 (Cambridge Isotope Laboratories, Inc., USA) as solvent. Tetra­methyl­silane (TMS, 0 ppm) served as the inter­nal standard for 1H NMR and 13C NMR, the residual solvent signal of DMSO-d6 (39.52 ppm relative to TMS) was used. Spectral data were processed with MestReNova software (Version 14.2.0; Mestrelab Research S.L., Santi­ago de Compostela, Spain).

1H NMR (600 MHz, CD3OD, ppm δ, J/Hz): 7.55 (1H, dd, J = 7.8, 1.7, H-6′), 7.37 (1H, ddd, J = 8.3, 7.3, 1.7, H-4′), 7.00 (1H, ddd, J = 7.8, 7.3, 1.0, H-5′), 6.98 (1H, dd, J = 8.3, 1.0, H-3′), 6.34 (1H, d, J = 2.1, H-8), 6.19 (1H, d, J = 2.1, H-6).

13C NMR (150 MHz, CD3OD, ppm. δ): 149.09 (C-2), 137.76 (C-3), 177.98 (C-4), 162.88 (C-5), 99.34 (C-6), 165.74 (C-7), 94.62 (C-8), 159.16 (C-9), 105.22 (C-10), 119.89 (C-1′), 156.37 (C-2′), 118.13 (C-3′), 132.93 (C-4′), 120.90 (C-5′), 131.35 (C-6′).

6. Refinement

Crystal data, data collection and structure refinement details are summarized in Table 3[link]. For I and II, the H atoms bonded to C atoms were placed in calculated positions and refined to ride on their parent atoms: C—H = 0.93 Å with Uiso(H) = 1.2Ueq(C) for aromatic H atoms. Hydroxyl H atoms in I were located using electron-density difference maps, and were refined freely. For II, H atoms of the hydroxyl groups and water mol­ecule were placed in calculated positions.

Table 3
Experimental details

For all structures: Z = 4. Experiments were carried out with Cu Kα radiation using a Bruker D8 VENTURE dual wavelength Mo/Cu diffractometer. Absorption was corrected for by multi-scan methods, (SADABS2016; Krause et al., 2015View full citation). H atoms were treated by a mixture of independent and constrained refinement.

  I II
Crystal data
Chemical formula C15H10O6 C15H10O6·H2O
Mr 286.23 304.25
Crystal system, space group Monoclinic, P21/c Orthorhombic, Pna21
Temperature (K) 293 291
a, b, c (Å) 15.0296 (5), 3.7601 (1), 21.6148 (7) 14.0628 (15), 23.714 (3), 3.9274 (5)
α, β, γ (°) 90, 99.453 (2), 90 90, 90, 90
V3) 1204.93 (6) 1309.7 (3)
μ (mm−1) 1.06 1.06
Crystal size (mm) 0.50 × 0.08 × 0.05 0.65 × 0.14 × 0.07
 
Data collection
Tmin, Tmax 0.592, 0.753 0.66, 0.93
No. of measured, independent and observed [I > 2σ(I)] reflections 26195, 2220, 2026 8711, 2305, 2142
Rint 0.052 0.038
(sin θ/λ)max−1) 0.603 0.602
 
Refinement
R[F2 > 2σ(F2)], wR(F2), S 0.046, 0.141, 1.17 0.043, 0.116, 0.93
No. of reflections 2220 2305
No. of parameters 199 207
No. of restraints 0 1
Δρmax, Δρmin (e Å−3) 0.39, −0.37 0.25, −0.21
Absolute structure Flack x determined using 811 quotients [(I+) − (I)]/[(I+) + (I)] (Parsons et al., 2013View full citation)
Absolute structure parameter 0.25 (10)
Computer programs: APEX5 (Bruker, 2023View full citation), SAINT (Bruker, 2019View full citation), SHELXT2018 (Sheldrick, 2015aView full citation), SHELXL2014 (Sheldrick, 2015bView full citation), Mercury (Macrae et al., 2020View full citation) and publCIF (Westrip, 2010View full citation).

Supporting information


Computing details top

3,5,7-Trihydroxy-2-(2-hydroxyphenyl)chromen-4-one (h200) top
Crystal data top
C15H10O6F(000) = 592
Mr = 286.23Dx = 1.578 Mg m3
Monoclinic, P21/cCu Kα radiation, λ = 1.54178 Å
a = 15.0296 (5) ÅCell parameters from 8258 reflections
b = 3.7601 (1) Åθ = 4.2–68.2°
c = 21.6148 (7) ŵ = 1.06 mm1
β = 99.453 (2)°T = 293 K
V = 1204.93 (6) Å3Needle, colourless
Z = 40.50 × 0.08 × 0.05 mm
Data collection top
Bruker D8 VENTURE dual wavelength Mo/Cu
diffractometer
2220 independent reflections
Radiation source: microfocus X-ray source, Incoatec IµS 3.0 Microfocus Source2026 reflections with I > 2σ(I)
Mirror monochromatorRint = 0.052
Detector resolution: 7.3910 pixels mm-1θmax = 68.3°, θmin = 3.0°
ωφ scansh = 1817
Absorption correction: multi-scan
(SADABS2016; Krause et al., 2015)
k = 44
Tmin = 0.592, Tmax = 0.753l = 2626
26195 measured reflections
Refinement top
Refinement on F2Hydrogen site location: inferred from neighbouring sites
Least-squares matrix: fullH atoms treated by a mixture of independent and constrained refinement
R[F2 > 2σ(F2)] = 0.046 w = 1/[σ2(Fo2) + (0.079P)2 + 0.4321P]
where P = (Fo2 + 2Fc2)/3
wR(F2) = 0.141(Δ/σ)max < 0.001
S = 1.17Δρmax = 0.39 e Å3
2220 reflectionsΔρmin = 0.37 e Å3
199 parametersExtinction correction: SHELXL2014 (Sheldrick, 2015b), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
0 restraintsExtinction coefficient: 0.0098 (12)
Special details top

Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/Ueq
O10.20372 (8)0.6063 (3)0.53557 (5)0.0305 (3)
O20.36717 (9)0.9638 (4)0.44792 (6)0.0398 (4)
H20.424 (2)0.986 (7)0.4589 (6)0.060*
O30.47468 (8)0.7623 (4)0.55722 (6)0.0463 (4)
O40.49049 (9)0.4646 (5)0.66865 (7)0.0526 (5)
H40.5088 (7)0.561 (9)0.6349 (13)0.079*
O50.21619 (10)0.1003 (4)0.73305 (7)0.0474 (4)
H50.2541 (14)0.037 (8)0.7676 (14)0.071*
O60.25875 (9)0.6804 (4)0.35317 (6)0.0451 (4)
H60.3070 (16)0.742 (7)0.3810 (12)0.068*
C20.24158 (11)0.7541 (5)0.48810 (7)0.0271 (4)
C30.33153 (11)0.8063 (5)0.49504 (8)0.0298 (4)
C40.39130 (11)0.7049 (5)0.55145 (8)0.0310 (4)
C4A0.35007 (12)0.5439 (5)0.59939 (8)0.0299 (4)
C50.40008 (12)0.4289 (5)0.65774 (8)0.0349 (4)
C60.35701 (13)0.2818 (5)0.70293 (8)0.0376 (5)
H6A0.38990.20790.74100.045*
C70.26335 (13)0.2443 (5)0.69115 (8)0.0351 (4)
C80.21210 (12)0.3543 (5)0.63513 (8)0.0329 (4)
H80.14970.32890.62800.039*
C8A0.25639 (12)0.5021 (5)0.59043 (8)0.0284 (4)
C90.17216 (11)0.8532 (4)0.43451 (8)0.0276 (4)
C100.18276 (12)0.8150 (5)0.37161 (8)0.0317 (4)
C110.11160 (13)0.9013 (6)0.32428 (8)0.0393 (5)
H110.11850.87310.28260.047*
C120.03171 (14)1.0270 (6)0.33804 (10)0.0430 (5)
H120.01521.08170.30580.052*
C130.02049 (13)1.0730 (5)0.40003 (10)0.0396 (5)
H130.03341.16200.40950.047*
C140.09014 (12)0.9853 (5)0.44718 (9)0.0334 (4)
H140.08241.01480.48870.040*
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
O10.0263 (6)0.0411 (7)0.0231 (6)0.0033 (5)0.0007 (5)0.0043 (5)
O20.0265 (7)0.0625 (9)0.0292 (7)0.0102 (6)0.0007 (5)0.0095 (6)
O30.0252 (7)0.0706 (10)0.0408 (8)0.0103 (6)0.0010 (5)0.0121 (7)
O40.0321 (8)0.0806 (12)0.0405 (8)0.0066 (7)0.0078 (6)0.0149 (8)
O50.0500 (8)0.0630 (10)0.0304 (7)0.0006 (7)0.0099 (6)0.0147 (7)
O60.0338 (7)0.0715 (10)0.0293 (7)0.0027 (7)0.0029 (5)0.0133 (7)
C20.0277 (8)0.0308 (8)0.0227 (8)0.0026 (7)0.0034 (6)0.0005 (6)
C30.0287 (9)0.0361 (9)0.0241 (8)0.0040 (7)0.0028 (7)0.0001 (7)
C40.0262 (8)0.0358 (9)0.0296 (9)0.0039 (7)0.0007 (7)0.0010 (7)
C4A0.0293 (9)0.0330 (9)0.0259 (8)0.0020 (7)0.0002 (7)0.0011 (7)
C50.0327 (9)0.0394 (10)0.0296 (9)0.0018 (7)0.0037 (7)0.0003 (8)
C60.0425 (11)0.0416 (10)0.0258 (9)0.0011 (8)0.0031 (7)0.0045 (8)
C70.0445 (11)0.0343 (9)0.0269 (9)0.0004 (8)0.0073 (7)0.0010 (7)
C80.0322 (9)0.0375 (10)0.0288 (9)0.0028 (7)0.0045 (7)0.0020 (7)
C8A0.0297 (9)0.0309 (9)0.0228 (8)0.0000 (7)0.0010 (6)0.0011 (7)
C90.0258 (8)0.0298 (8)0.0258 (8)0.0045 (6)0.0003 (6)0.0012 (7)
C100.0296 (9)0.0364 (10)0.0282 (9)0.0036 (7)0.0022 (7)0.0022 (7)
C110.0409 (10)0.0493 (11)0.0250 (9)0.0048 (9)0.0026 (7)0.0019 (8)
C120.0354 (10)0.0483 (12)0.0402 (11)0.0013 (8)0.0092 (8)0.0105 (9)
C130.0280 (9)0.0418 (11)0.0475 (11)0.0032 (8)0.0020 (8)0.0040 (9)
C140.0298 (9)0.0388 (10)0.0313 (9)0.0019 (7)0.0042 (7)0.0004 (7)
Geometric parameters (Å, º) top
O1—C21.370 (2)C5—C61.374 (3)
O1—C8A1.370 (2)C6—C71.396 (3)
O2—C31.361 (2)C6—H6A0.9300
O2—H20.85 (3)C7—C81.387 (3)
O3—C41.257 (2)C8—C8A1.377 (2)
O4—C51.347 (2)C8—H80.9300
O4—H40.90 (3)C9—C141.397 (3)
O5—C71.352 (2)C9—C101.402 (2)
O5—H50.89 (3)C10—C111.392 (3)
O6—C101.367 (2)C11—C121.368 (3)
O6—H60.89 (3)C11—H110.9300
C2—C31.350 (2)C12—C131.389 (3)
C2—C91.474 (2)C12—H120.9300
C3—C41.442 (2)C13—C141.376 (3)
C4—C4A1.427 (2)C13—H130.9300
C4A—C8A1.398 (2)C14—H140.9300
C4A—C51.425 (2)
C2—O1—C8A120.81 (13)C8—C7—C6121.86 (17)
C3—O2—H2109.5C8A—C8—C7118.02 (17)
C5—O4—H4109.5C8A—C8—H8121.0
C7—O5—H5109.5C7—C8—H8121.0
C10—O6—H6109.5O1—C8A—C8116.45 (15)
C3—C2—O1120.48 (15)O1—C8A—C4A120.87 (15)
C3—C2—C9128.12 (15)C8—C8A—C4A122.67 (16)
O1—C2—C9111.33 (14)C14—C9—C10118.09 (16)
C2—C3—O2119.34 (15)C14—C9—C2117.99 (15)
C2—C3—C4121.93 (16)C10—C9—C2123.90 (16)
O2—C3—C4118.72 (15)O6—C10—C11116.75 (16)
O3—C4—C4A123.05 (16)O6—C10—C9123.65 (16)
O3—C4—C3120.72 (16)C11—C10—C9119.54 (17)
C4A—C4—C3116.22 (15)C12—C11—C10121.12 (18)
C8A—C4A—C5117.47 (16)C12—C11—H11119.4
C8A—C4A—C4119.65 (16)C10—C11—H11119.4
C5—C4A—C4122.87 (16)C11—C12—C13120.20 (17)
O4—C5—C6119.70 (17)C11—C12—H12119.9
O4—C5—C4A119.65 (17)C13—C12—H12119.9
C6—C5—C4A120.65 (17)C14—C13—C12119.12 (18)
C5—C6—C7119.34 (16)C14—C13—H13120.4
C5—C6—H6A120.3C12—C13—H13120.4
C7—C6—H6A120.3C13—C14—C9121.90 (17)
O5—C7—C8115.30 (17)C13—C14—H14119.0
O5—C7—C6122.84 (17)C9—C14—H14119.0
C8A—O1—C2—C31.3 (3)C2—O1—C8A—C8179.56 (15)
C8A—O1—C2—C9178.60 (14)C2—O1—C8A—C4A0.0 (2)
O1—C2—C3—O2177.97 (15)C7—C8—C8A—O1179.72 (16)
C9—C2—C3—O21.2 (3)C7—C8—C8A—C4A0.2 (3)
O1—C2—C3—C41.1 (3)C5—C4A—C8A—O1179.98 (15)
C9—C2—C3—C4177.86 (17)C4—C4A—C8A—O11.5 (3)
C2—C3—C4—O3178.72 (18)C5—C4A—C8A—C80.5 (3)
O2—C3—C4—O30.4 (3)C4—C4A—C8A—C8178.93 (17)
C2—C3—C4—C4A0.4 (3)C3—C2—C9—C14140.56 (19)
O2—C3—C4—C4A179.49 (16)O1—C2—C9—C1436.4 (2)
O3—C4—C4A—C8A177.41 (18)C3—C2—C9—C1041.0 (3)
C3—C4—C4A—C8A1.7 (3)O1—C2—C9—C10141.99 (17)
O3—C4—C4A—C51.0 (3)C14—C9—C10—O6178.23 (17)
C3—C4—C4A—C5179.91 (16)C2—C9—C10—O60.2 (3)
C8A—C4A—C5—O4179.79 (17)C14—C9—C10—C111.4 (3)
C4—C4A—C5—O41.4 (3)C2—C9—C10—C11177.08 (17)
C8A—C4A—C5—C60.2 (3)O6—C10—C11—C12177.87 (18)
C4—C4A—C5—C6178.67 (18)C9—C10—C11—C120.8 (3)
O4—C5—C6—C7179.73 (18)C10—C11—C12—C130.4 (3)
C4A—C5—C6—C70.2 (3)C11—C12—C13—C141.0 (3)
C5—C6—C7—O5179.59 (18)C12—C13—C14—C90.4 (3)
C5—C6—C7—C80.5 (3)C10—C9—C14—C130.8 (3)
O5—C7—C8—C8A179.78 (16)C2—C9—C14—C13177.76 (17)
C6—C7—C8—C8A0.3 (3)
Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
O2—H2···O3i0.85 (3)1.85 (3)2.6094 (18)147 (3)
O4—H4···O30.91 (3)1.78 (3)2.631 (2)155 (3)
O5—H5···O6ii0.91 (4)1.98 (4)2.7778 (19)146 (3)
O6—H6···O20.89 (3)1.79 (3)2.6253 (19)155 (3)
Symmetry codes: (i) x+1, y+2, z+1; (ii) x, y+1/2, z+1/2.
3,5,7-Trihydroxy-2-(2-hydroxyphenyl)chromen-4-one monohydrate (h149) top
Crystal data top
C15H10O6·H2ODx = 1.543 Mg m3
Mr = 304.25Cu Kα radiation, λ = 1.54178 Å
Orthorhombic, Pna21Cell parameters from 4404 reflections
a = 14.0628 (15) Åθ = 7.3–68.1°
b = 23.714 (3) ŵ = 1.06 mm1
c = 3.9274 (5) ÅT = 291 K
V = 1309.7 (3) Å3Needle, colourless
Z = 40.65 × 0.14 × 0.07 mm
F(000) = 632
Data collection top
Bruker D8 VENTURE dual wavelength Mo/Cu
diffractometer
2305 independent reflections
Radiation source: microfocus X-ray source, Incoatec IµS 3.0 Microfocus Source2142 reflections with I > 2σ(I)
Mirror monochromatorRint = 0.038
Detector resolution: 7.3910 pixels mm-1θmax = 68.3°, θmin = 7.3°
ωφ scansh = 1616
Absorption correction: multi-scan
(SADABS2016; Krause et al., 2015)
k = 2528
Tmin = 0.66, Tmax = 0.93l = 44
8711 measured reflections
Refinement top
Refinement on F2Hydrogen site location: mixed
Least-squares matrix: fullH atoms treated by a mixture of independent and constrained refinement
R[F2 > 2σ(F2)] = 0.043 w = 1/[σ2(Fo2) + (0.0954P)2 + 0.0942P]
where P = (Fo2 + 2Fc2)/3
wR(F2) = 0.116(Δ/σ)max = 0.002
S = 0.93Δρmax = 0.25 e Å3
2305 reflectionsΔρmin = 0.20 e Å3
207 parametersAbsolute structure: Flack x determined using 811 quotients [(I+)-(I-)]/[(I+)+(I-)] (Parsons et al., 2013)
1 restraintAbsolute structure parameter: 0.25 (10)
Special details top

Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/Ueq
O10.21017 (12)0.67355 (8)0.4950 (5)0.0496 (5)
O20.42512 (15)0.62983 (10)0.0550 (7)0.0659 (6)
H20.41190.59620.06060.099*
O30.47772 (13)0.73003 (8)0.2957 (6)0.0594 (5)
O40.43416 (14)0.82483 (10)0.6100 (7)0.0670 (6)
H40.472 (3)0.7990 (17)0.501 (15)0.101*
O50.12647 (14)0.83978 (9)1.0763 (7)0.0663 (6)
H50.07820.82121.11130.099*
O60.36173 (17)0.53262 (11)0.2674 (9)0.0776 (7)
H60.36470.53920.47210.116*
C20.27162 (18)0.64084 (11)0.3106 (7)0.0474 (6)
C30.36183 (17)0.65904 (12)0.2473 (7)0.0492 (6)
C40.39466 (18)0.71322 (12)0.3617 (7)0.0488 (6)
C4A0.32752 (17)0.74680 (12)0.5469 (7)0.0465 (6)
C50.34735 (17)0.80153 (11)0.6692 (7)0.0501 (6)
C60.2810 (2)0.83166 (11)0.8462 (8)0.0542 (7)
H6A0.29530.86750.92710.065*
C70.19053 (19)0.80783 (12)0.9051 (7)0.0511 (6)
C80.16834 (17)0.75469 (12)0.7910 (7)0.0501 (6)
H80.10900.73900.83450.060*
C8A0.23623 (16)0.72515 (10)0.6101 (7)0.0454 (6)
C90.22479 (19)0.58975 (12)0.1862 (7)0.0527 (7)
C100.2694 (2)0.53740 (13)0.1606 (8)0.0611 (8)
C110.2213 (3)0.49107 (15)0.0292 (10)0.0738 (10)
H110.25220.45650.01250.089*
C120.1298 (3)0.49590 (18)0.0747 (11)0.0772 (10)
H120.09830.46460.16180.093*
C130.0833 (2)0.54674 (18)0.0524 (9)0.0729 (9)
H130.02070.54980.12640.087*
C140.1295 (2)0.59331 (14)0.0801 (8)0.0586 (7)
H140.09720.62740.09930.070*
O1W0.4385 (3)0.43331 (13)0.1462 (13)0.1119 (12)
H1WA0.42790.44530.34670.168*
H1WB0.42470.39840.15420.168*
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
O10.0353 (9)0.0610 (10)0.0525 (11)0.0084 (7)0.0025 (8)0.0096 (9)
O20.0449 (11)0.0735 (12)0.0795 (15)0.0039 (9)0.0108 (10)0.0067 (12)
O30.0327 (9)0.0747 (11)0.0708 (13)0.0106 (8)0.0067 (8)0.0018 (10)
O40.0434 (10)0.0699 (12)0.0878 (17)0.0176 (8)0.0086 (11)0.0024 (12)
O50.0467 (11)0.0675 (11)0.0846 (16)0.0038 (9)0.0102 (11)0.0011 (12)
O60.0639 (13)0.0716 (13)0.0973 (19)0.0017 (10)0.0159 (14)0.0092 (15)
C20.0370 (12)0.0619 (14)0.0435 (13)0.0044 (10)0.0025 (10)0.0124 (12)
C30.0367 (12)0.0630 (14)0.0480 (14)0.0027 (10)0.0001 (11)0.0094 (13)
C40.0323 (12)0.0667 (15)0.0475 (14)0.0048 (11)0.0005 (10)0.0129 (13)
C4A0.0334 (12)0.0607 (14)0.0455 (13)0.0044 (10)0.0014 (10)0.0134 (12)
C50.0341 (11)0.0607 (14)0.0555 (15)0.0064 (10)0.0040 (11)0.0125 (13)
C60.0470 (15)0.0543 (14)0.0612 (18)0.0028 (11)0.0028 (13)0.0071 (13)
C70.0369 (13)0.0630 (15)0.0532 (14)0.0042 (11)0.0008 (11)0.0108 (13)
C80.0326 (12)0.0636 (15)0.0540 (15)0.0034 (10)0.0006 (11)0.0133 (13)
C8A0.0340 (12)0.0580 (13)0.0442 (13)0.0046 (9)0.0035 (11)0.0141 (12)
C90.0458 (14)0.0670 (16)0.0454 (14)0.0118 (11)0.0028 (11)0.0090 (12)
C100.0553 (17)0.0714 (17)0.0565 (17)0.0116 (13)0.0028 (14)0.0107 (15)
C110.081 (2)0.0707 (18)0.070 (2)0.0196 (16)0.0053 (18)0.0015 (17)
C120.074 (2)0.091 (2)0.0660 (19)0.032 (2)0.0016 (18)0.0084 (18)
C130.0527 (17)0.107 (3)0.0587 (18)0.0280 (19)0.0013 (14)0.0002 (18)
C140.0426 (14)0.0837 (19)0.0497 (15)0.0141 (13)0.0021 (12)0.0066 (15)
O1W0.119 (3)0.0767 (16)0.140 (3)0.0237 (16)0.004 (2)0.015 (2)
Geometric parameters (Å, º) top
O1—C8A1.355 (3)C6—C71.411 (4)
O1—C21.369 (3)C6—H6A0.9300
O2—C31.357 (4)C7—C81.373 (4)
O2—H20.8200C8—C8A1.381 (4)
O3—C41.261 (3)C8—H80.9300
O4—C51.360 (3)C9—C101.395 (4)
O4—H40.92 (6)C9—C141.405 (4)
O5—C71.356 (4)C10—C111.390 (5)
O5—H50.8200C11—C121.355 (6)
O6—C101.369 (4)C11—H110.9300
O6—H60.8200C12—C131.375 (6)
C2—C31.363 (3)C12—H120.9300
C2—C91.463 (4)C13—C141.383 (5)
C3—C41.437 (4)C13—H130.9300
C4—C4A1.433 (4)C14—H140.9300
C4A—C8A1.405 (3)O1W—H1WA0.8500
C4A—C51.412 (4)O1W—H1WB0.8499
C5—C61.365 (4)
C8A—O1—C2121.18 (19)C7—C8—C8A118.4 (2)
C3—O2—H2109.5C7—C8—H8120.8
C5—O4—H4109.5C8A—C8—H8120.8
C7—O5—H5109.5O1—C8A—C8116.3 (2)
C10—O6—H6109.5O1—C8A—C4A121.2 (2)
O1—C2—C3120.3 (2)C8—C8A—C4A122.5 (3)
O1—C2—C9111.2 (2)C10—C9—C14117.5 (3)
C3—C2—C9128.4 (3)C10—C9—C2124.0 (2)
O2—C3—C2123.4 (3)C14—C9—C2118.6 (3)
O2—C3—C4114.8 (2)O6—C10—C11120.7 (3)
C2—C3—C4121.7 (3)O6—C10—C9118.6 (3)
O3—C4—C4A122.6 (3)C11—C10—C9120.7 (3)
O3—C4—C3121.0 (3)C12—C11—C10120.5 (4)
C4A—C4—C3116.3 (2)C12—C11—H11119.8
C8A—C4A—C5117.2 (2)C10—C11—H11119.8
C8A—C4A—C4119.2 (3)C13—C12—C11120.5 (3)
C5—C4A—C4123.6 (2)C13—C12—H12119.8
O4—C5—C6119.2 (3)C11—C12—H12119.8
O4—C5—C4A119.5 (3)C12—C13—C14120.0 (3)
C6—C5—C4A121.3 (2)C12—C13—H13120.0
C5—C6—C7119.3 (3)C14—C13—H13120.0
C5—C6—H6A120.3C13—C14—C9120.8 (3)
C7—C6—H6A120.3C13—C14—H14119.6
O5—C7—C8121.6 (2)C9—C14—H14119.6
O5—C7—C6117.2 (3)H1WA—O1W—H1WB104.5
C8—C7—C6121.2 (3)
C8A—O1—C2—C31.9 (3)C2—O1—C8A—C8179.5 (2)
C8A—O1—C2—C9174.3 (2)C2—O1—C8A—C4A0.5 (3)
O1—C2—C3—O2177.3 (2)C7—C8—C8A—O1178.3 (2)
C9—C2—C3—O21.7 (5)C7—C8—C8A—C4A1.7 (4)
O1—C2—C3—C41.8 (4)C5—C4A—C8A—O1178.4 (2)
C9—C2—C3—C4173.8 (2)C4—C4A—C8A—O11.0 (4)
O2—C3—C4—O32.7 (4)C5—C4A—C8A—C81.6 (4)
C2—C3—C4—O3178.6 (3)C4—C4A—C8A—C8179.0 (2)
O2—C3—C4—C4A176.1 (2)O1—C2—C9—C10143.9 (3)
C2—C3—C4—C4A0.3 (4)C3—C2—C9—C1040.2 (4)
O3—C4—C4A—C8A179.9 (3)O1—C2—C9—C1437.2 (3)
C3—C4—C4A—C8A1.1 (4)C3—C2—C9—C14138.7 (3)
O3—C4—C4A—C50.6 (4)C14—C9—C10—O6179.0 (3)
C3—C4—C4A—C5178.3 (2)C2—C9—C10—O62.1 (5)
C8A—C4A—C5—O4178.9 (3)C14—C9—C10—C111.1 (4)
C4—C4A—C5—O40.4 (4)C2—C9—C10—C11177.8 (3)
C8A—C4A—C5—C61.0 (4)O6—C10—C11—C12179.7 (4)
C4—C4A—C5—C6179.6 (3)C9—C10—C11—C120.4 (5)
O4—C5—C6—C7179.4 (3)C10—C11—C12—C130.1 (6)
C4A—C5—C6—C70.6 (4)C11—C12—C13—C140.7 (6)
C5—C6—C7—O5178.8 (3)C12—C13—C14—C91.4 (5)
C5—C6—C7—C80.7 (4)C10—C9—C14—C131.6 (4)
O5—C7—C8—C8A178.2 (3)C2—C9—C14—C13177.3 (3)
C6—C7—C8—C8A1.3 (4)
Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
O2—H2···O60.821.852.609 (3)153
O4—H4···O30.821.912.639 (3)147
O5—H5···O3i0.822.002.803 (3)166
O1W—H1WB···O5ii0.852.763.281 (5)121
O1W—H1WB···O5iii0.852.282.934 (4)134
Symmetry codes: (i) x1/2, y+3/2, z+1; (ii) x+1/2, y1/2, z3/2; (iii) x+1/2, y1/2, z1/2.
 

Acknowledgements

This work was carried out within the framework of the Basic Scientific Research Program of the Academy of Sciences of the Republic of Uzbekistan.

References

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