research communications
Levosimendan Form I, C14H12N6O
aNorth Central College, Department of Chemistry, 131 S. Loomis St., Naperville IL 60540, USA, bNorth Central College, Department of Physics, 131 S. Loomis St., Naperville IL 60540, USA, and cICDD, 12 Campus Blvd., Newtown Square PA 19073-3273, USA
*Correspondence e-mail: [email protected]
The of levosimendan Form I [systematic name: 2-({4-[(4R)-4-methyl-6-oxo-4,5-dihydro-1H-pyridazin-3-yl]phenyl}hydrazinylidene)propanedinitrile], C14H12N6O, has been solved and refined using synchrotron X-ray powder diffraction data, and optimized using density functional theory techniques. Levosimendan Form I crystallizes in space group P212121 (#19). The is characterized by nearly parallel stacking of the molecules parallel to the bc plane. N—H⋯O and N—H⋯N hydrogen bonds link the molecules within the layers, with graph sets C(11) and C(13) and larger patterns.
1. Chemical context
Levosimendan (marketed as Simdax®) is used to treat congestive heart failure. It functions as a calcium sensitizer inotrope medication used to control the force of heart contractions. The (CAS Registry Number 141505-33-1) is 2-[[4-[(4R)-4-methyl-6-oxo-4,5-dihydro-1H-pyridazin-3-yl]phenyl]hydrazinylidene]propanedinitrile.
Compositions containing crystalline levosimendan Form I are claimed in US Patent 6,355,269 B1 (Backman et al., 2002
; Orion Corporation), and powder data for pure Form I are provided. A process for preparing levosimendan Form II is claimed in European Patent Application EP 3,424,908 A1 (Singhania, 2017
; Melody Healthcare Pvt. Ltd.), and powder data are provided. However, crystal structure data are not reported.
This work was carried out as part of a project (Kaduk et al., 2014
) to determine the crystal structures of large-volume commercial pharmaceuticals, and include high-quality powder diffraction data for them in the Powder Diffraction File (Kabekkodu et al., 2024
).
2. Structural commentary
The synchrotron pattern of levosimendan is similar enough to that reported by Backman et al. (2002
) for Form I (Fig. 1
) to conclude that they represent the same material. The patent pattern exhibits significant displacement/transparency peak position errors, as well as preferred orientation.
| Figure 1 Comparison of the synchrotron pattern of levosimendan Form I (black) from this study to the laboratory XRD pattern reported by Backman et al. (2002 |
The root-mean-square difference of the non-H atoms in the Rietveld-refined and VASP-optimized structures of levosimendan, calculated using the Mercury CSD-Materials/Search/Crystal Packing Similarity tool (Macrae et al., 2020
) is 0.093 Å (Fig. 2
); the structures are essentially identical. The root-mean-square Cartesian displacement of the non-H atoms in the refined and optimized structures, calculated using the Mercury Calculate/Molecule Overlay tool, is 0.083 Å (Fig. 3
); the maximum difference is 0.167 Å, at N6. The agreements are within the normal range for correct structures (van de Streek & Neumann, 2014
). The asymmetric unit is illustrated in Fig. 4
. The remaining discussion will emphasize the VASP-optimized structure.
| Figure 2 Comparison of the Rietveld-refined (colored by atom type) and VASP-optimized (pale green) structures of levosimendan Form I, calculated using the Mercury CSD-Materials/Search/Crystal Packing Similarity tool. The root-mean-square Cartesian displacement is 0.093 Å. Image generated using Mercury (Macrae et al., 2020 |
| | Figure 3 Comparison of the refined structure of levosimendan Form I (red) to the VASP-optimized structure (blue). The comparison was generated using the Mercury Calculate/Molecule Overlay tool; the r.m.s. difference is 0.083 Å. Image generated using Mercury (Macrae et al., 2020 |
| | Figure 4 The asymmetric unit of levosimendan, with the atom numbering. The atoms are represented by 50% probability spheroids. Image generated using Mercury (Macrae et al., 2020 |
All of the bond distances, bond angles, and torsion angles fall within the normal ranges indicated by a Mercury Mogul Geometry check (Macrae et al., 2020
). Quantum chemical geometry optimization of the isolated levosimendan molecule (DFT/B3LYP/6-31G*/water) using Spartan '24 (Wavefunction, 2025
) indicated that the observed conformation is 2.3 kcal mol−1 higher in energy than a local minimum, which has a very similar conformation. The global minimum-energy conformation is 3.3 kcal mol−1 lower in energy, but is folded on itself. Intermolecular interactions are thus important to determine the observed solid-state conformation.
3. Supramolecular features
A view of the down the short a-axis (Fig. 5
) shows the molecules reasonably clearly, but obscures the nearly parallel stacking of the molecules (Fig. 6
) parallel to the bc plane. N—H⋯O and N—H⋯N hydrogen bonds (Table 1
) link the molecules within the layers. The mean plane of the molecules is approximately (5). The Mercury Aromatics Analyser indicates two strong (d = 4.42 Å) interactions between the phenyl rings.
| ||||||||||||||||||||||||||||||||||||||||||||||||||
| Figure 5 Crystal structure of levosimendan, viewed down the a-axis. Image generated using DIAMOND (Crystal Impact, 2025 |
| | Figure 6 Crystal structure of levosimendan, viewed down the b axis. Image generated using DIAMOND (Crystal Impact, 2025 |
Analysis of the contributions to the total crystal energy of the structure using the Forcite module of Materials Studio (Dassault Systèmes, 2025
) indicated that bond, angle, and torsion distortion terms contribute about equally to the intramolecular energy. The intermolecular energy is dominated by van der Waals attractions, which in this force field based analysis include hydrogen bonds. The hydrogen bonds are better discussed using the results of the DFT calculation.
A strong N4—H33⋯O1 hydrogen bond (Table 1
) links an amino group and the carbonyl group. The energy of this hydrogen bond (5.6 kcal mol−1) was calculated using the correlation of Wheatley & Kaduk (2019
). An N3—H28⋯N6 hydrogen bond links the other amino group with one of the cyano groups. These two classical hydrogen bonds link the molecules within the layers (Fig. 7
). The graph sets (Etter, 1990
; Bernstein et al., 1995
; Motherwell et al., 2000
) of these two hydrogen bonds are C(11) and C(13), and they form larger patterns with graph sets C22(10), C22(24) and higher. Intra- and intermolecular C—H⋯O, C—H⋯N, and C—H⋯C hydrogen bonds also contribute to the lattice energy.
| Figure 7 The hydrogen bonds in the bc plane of the layers in levosimendan Form I. Image generated using Mercury (Macrae et al., 2020 |
The volume enclosed by the Hirshfeld surface of levosimendan (Fig. 8
; Hirshfeld, 1977
; Spackman et al., 2021
) is 346.56 Å3, 97.93% of 1/4 of the unit-cell volume. The packing density is thus typical. Surprisingly, the hydrogen bonds are not prominent among the close contacts (red in Fig. 8
). The volume/non-hydrogen atom is smaller than normal, at 16.8 Å3.
| Figure 8 The Hirshfeld surface of levosimendan Form I. Intermolecular contacts longer than the sums of the van der Waals radii are colored blue, and contacts shorter than the sums of the radii are colored red. Contacts equal to the sums of radii are white. Image generated using CrystalExplorer (Spackman et al., 2021 |
The Bravais–Friedel–Donnay–Harker (Bravais, 1866
; Friedel, 1907
; Donnay & Harker, 1937
) algorithm suggests that we might expect elongated morphology for levosimendan, with [100] as the long axis. A second-order spherical harmonic model for preferred orientation was included. The texture index was 1.002, indicating that the preferred orientation was negligible in this rotated capillary specimen.
4. Database survey
A name search in the Powder Diffraction File (Kabekkodu et al., 2024
) yielded no hits. A reduced cell search in the Cambridge Structural Database (CSD Version 2026.1.0; Groom et al., 2016
), combined with the chemistry C, H, N, and O only, yielded 30 hits, but no structures of levosimendan or its derivatives. The powder pattern has been submitted to ICDD for inclusion in the Powder Diffraction File™ (PDF®)
5. Synthesis and crystallization
Levosimendan was a commercial reagent, purchased from TargetMol (Batch #120246), and was used as received.
6. Refinement
Crystal data, data collection and structure details are summarized in Table 2
. The bright-orange powder was packed into a 1.5 mm diameter Kapton capillary, and rotated during the measurement at ∼50 Hz. The powder pattern was measured at 295 K at beam line 11-BM (Lee et al., 2008
; Wang et al., 2008
; Antao et al., 2008
) of the Advanced Photon Source at Argonne National Laboratory using a wavelength of 0.4687342 Å from 0.5–50° in 2θ with a step size of 0.001° and a counting time of 0.1 sec/step. The high-resolution powder diffraction data were collected using twelve silicon crystal analyzers that allow for high angular resolution, high precision, and accurate peak positions. A mixture of silicon (NIST SRM 640c) and alumina (NIST SRM 676a) standards (ratio Al2O3:Si = 2:1 by weight) was used to calibrate the instrument and refine the monochromatic wavelength used in the experiment.
|
The pattern was indexed on a primitive orthorhombic with a = 6.90090, b = 10.33125, c = 20.06161 Å, V = 1430.29 Å3, and Z = 4 using JADE Pro (MDI, 2025
). The space group suggested by EXPO2014 (Altomare et al., 2013
) was P212121, which was confirmed by the successful solution and refinement of the structure.
The molecular structure of levosimendan was downloaded from PubChem (Kim et al., 2023
) as Conformer3D_COMPOUND_CID_3033825.sdf. It was converted to a *.mol2 file using Mercury (Macrae et al., 2020
). The structure was solved using Monte Carlo simulated annealing techniques as implemented in EXPO2014 (Altomare et al., 2013
).
Rietveld refinement was carried out using GSAS-II (Toby & Von Dreele, 2013
). Only the 2.0–25.0° portion of the pattern was included in the refinements (dmin = 1.079 Å). All non-H bond distances and angles were subjected to restraints, based on a Mercury/Mogul Geometry Check (Sykes et al., 2011
; Bruno et al., 2004
). The Mogul average and standard deviation for each quantity were used as the restraint parameters. The phenyl ring was restrained to be planar. The restraints contributed 4.4% to the overall χ2. The hydrogen atoms were included in calculated positions, which were recalculated during the refinement using Materials Studio (Dassault Systèmes, 2024). The Uiso of the non-H atoms were grouped by chemical similarity. The Uiso of the H atoms were fixed at 1.2× the Uiso of the heavy atom to which they are attached. The peak profiles were described using the generalized microstrain model (Stephens, 1999
). The background was modeled using a six-term shifted Chebyshev polynomial, with peaks at 5.71 and 8.19° to model the scattering from the Kapton capillary and any amorphous component of the sample. The background is different from the usual one from the Kapton capillary, suggesting that the sample really does contain an amorphous component. A few unindexed peaks were present in the pattern. These were best matched by PDF entry 02-072-2436 for poly(ɛ-caprolactone) (CSD Refcode WIMXAR; Bittiger et al., 1970
), which was included in the refinement as a second phase. Its concentration was refined to 0.3 wt%.
The final refinement of 89 variables using 23,001 observations and 52 restraints yielded the residuals Rwp = 0.06661 and GOF = 1.45. The largest peak (1.36 Å from C8) and hole (1.20 Å from C17) in the difference Fourier map were 0.13 (4) and −0.13 (4) e Å−3, respectively. The final Rietveld plot is shown in Fig. 9
. The largest features in the normalized error plot are in the shapes of some of the strong low-angle peaks.
| Figure 9 The Rietveld plot for levosimendan. The blue crosses represent the observed data points, and the green line is the calculated pattern. The cyan curve is the normalized error plot, and the red line is the background curve. The blue tick marks indicate the peak positions for levosimendan. The vertical scale has been multiplied by a factor of 10× for 2θ > 10.0°. |
The of levosimendan was optimized (fixed experimental unit cell) with density functional theory techniques using VASP (Kresse & Furthmüller, 1996
) through the MedeA graphical interface (Materials Design, 2024
). The calculation was carried out on 32 cores of a 144-core (768 Gb memory) HPE Superdome Flex 280 Linux server at North Central College. The calculation used the GGA-PBE functional, a plane wave cutoff energy of 400.0 eV, and a k-point spacing of 0.5 Å−1 leading to a 2 × 2× 1 mesh, and took ∼2.6 h. Single-point density functional theory calculations (fixed experimental cell) and population analysis were carried out using CRYSTAL23 (Erba et al., 2023
); (fixed experimental cell) and population analysis were carried out using CRYSTAL17 (Dovesi et al., 2018
). The basis sets for the H, C, N and O atoms in the calculation were those of Gatti et al. (1994
). The calculations were run on a 3.5 GHz PC using 8 k-points and the B3LYP functional, and took ∼1.4 h.
Supporting information
contains datablocks levosimendan_publ, levosimendan_overall, levosimendan, poly_caprolactone, levosimendan_pwd_0, levosimendan_VASP. DOI: https://doi.org/10.1107/S2056989026005190/jw2008sup1.cif
Supporting information file. DOI: https://doi.org/10.1107/S2056989026005190/jw2008levosimendansup2.cml
| C14H12N6O | V = 1415.53 (2) Å3 |
| Mr = 280.29 | Z = 4 |
| Orthorhombic, P212121 | Dx = 1.315 Mg m−3 |
| a = 6.88117 (5) Å | Synchrotron radiation |
| b = 10.29085 (14) Å | T = 295 K |
| c = 19.9896 (2) Å | cylinder, 2 × 1.5 mm |
| 11-BM, APS diffractometer | Data collection mode: transmission |
| Specimen mounting: Kapton capillary | Scan method: step |
| Weighting scheme based on measured s.u.'s | Preferred orientation correction: Simple spherical harmonic correction Order = 2 Coefficients: 0:0:C(2,0) = -0.0780; 0:0:C(2,2) = -0.0670 |
| x | y | z | Uiso*/Ueq | ||
| O1 | 0.3588 (6) | 0.3414 (4) | 1.22287 (18) | 0.0376 (10)* | |
| N2 | 0.2838 (11) | 0.6044 (3) | 1.10975 (16) | 0.0376 (10)* | |
| N3 | 0.2866 (9) | 0.5248 (3) | 1.16716 (16) | 0.0376 (10)* | |
| N4 | 0.2546 (9) | 0.8551 (4) | 0.81892 (15) | 0.0470 (11)* | |
| N5 | 0.3124 (9) | 0.9785 (4) | 0.8192 (2) | 0.0470 (11)* | |
| N6 | 0.3644 (8) | 1.2937 (4) | 0.7777 (3) | 0.0470 (11)* | |
| N7 | 0.2169 (10) | 0.9602 (6) | 0.6485 (2) | 0.0470 (11)* | |
| C8 | 0.3240 (7) | 0.3997 (3) | 1.04589 (17) | 0.0376 (10)* | |
| C9 | 0.4339 (7) | 0.3493 (4) | 1.10531 (19) | 0.0376 (10)* | |
| C10 | 0.3069 (9) | 0.5467 (2) | 1.05283 (14) | 0.0376 (10)* | |
| C11 | 0.1216 (10) | 0.3375 (5) | 1.0463 (3) | 0.0376 (10)* | |
| C12 | 0.2985 (13) | 0.6283 (2) | 0.99214 (15) | 0.0394 (12)* | |
| C13 | 0.3476 (10) | 0.4004 (3) | 1.16966 (14) | 0.0376 (10)* | |
| C14 | 0.2772 (11) | 0.5712 (3) | 0.92960 (18) | 0.0394 (12)* | |
| C15 | 0.2935 (14) | 0.7636 (3) | 0.99683 (16) | 0.0394 (12)* | |
| C16 | 0.2604 (12) | 0.6463 (3) | 0.87291 (16) | 0.0394 (12)* | |
| C17 | 0.2957 (13) | 0.8390 (3) | 0.93951 (18) | 0.0394 (12)* | |
| C18 | 0.2734 (13) | 0.7806 (3) | 0.87704 (15) | 0.0394 (12)* | |
| C19 | 0.2862 (11) | 1.0528 (4) | 0.7653 (2) | 0.0470 (11)* | |
| C20 | 0.3161 (9) | 1.1878 (4) | 0.7732 (3) | 0.0470 (11)* | |
| C21 | 0.2562 (7) | 1.0050 (6) | 0.6992 (2) | 0.0470 (11)* | |
| H22 | 0.39740 | 0.37220 | 1.00210 | 0.0451* | |
| H23 | 0.58470 | 0.38100 | 1.10290 | 0.0451* | |
| H24 | 0.42550 | 0.24610 | 1.10960 | 0.0451* | |
| H25 | 0.05530 | 0.32640 | 1.09300 | 0.0451* | |
| H26 | 0.01400 | 0.39720 | 1.01670 | 0.0451* | |
| H27 | 0.12240 | 0.24650 | 1.01800 | 0.0451* | |
| H28 | 0.24490 | 0.58260 | 1.20820 | 0.0451* | |
| H29 | 0.28830 | 0.46680 | 0.92150 | 0.0473* | |
| H30 | 0.32240 | 0.81360 | 1.04360 | 0.0473* | |
| H31 | 0.28490 | 0.60190 | 0.82380 | 0.0473* | |
| H32 | 0.32520 | 0.94610 | 0.94320 | 0.0473* | |
| H33 | 0.31980 | 0.81670 | 0.77660 | 0.0564* |
| O1—C13 | 1.227 (3) | C14—C12 | 1.389 (2) |
| N2—N3 | 1.410 (3) | C14—C16 | 1.376 (2) |
| N2—C10 | 1.2931 (13) | C14—H29 | 1.089 (3) |
| N3—N2 | 1.410 (3) | C15—C12 | 1.396 (2) |
| N3—C13 | 1.348 (2) | C15—C17 | 1.384 (2) |
| N3—H28 | 1.053 (2) | C15—H30 | 1.086 (3) |
| N4—N5 | 1.331 (4) | C16—C14 | 1.376 (2) |
| N4—C18 | 1.398 (2) | C16—C18 | 1.388 (2) |
| N4—H33 | 1.036 (5) | C16—H31 | 1.096 (3) |
| N5—N4 | 1.331 (4) | C17—C15 | 1.384 (2) |
| N5—C19 | 1.333 (3) | C17—C18 | 1.394 (2) |
| N6—C20 | 1.143 (3) | C17—H32 | 1.123 (3) |
| N7—C21 | 1.146 (3) | C18—N4 | 1.398 (2) |
| C8—C9 | 1.501 (4) | C18—C16 | 1.388 (2) |
| C8—C10 | 1.5239 (19) | C18—C17 | 1.394 (2) |
| C8—C11 | 1.533 (4) | C19—N5 | 1.333 (3) |
| C8—H22 | 1.050 (4) | C19—C20 | 1.414 (3) |
| C9—C8 | 1.501 (4) | C19—C21 | 1.424 (3) |
| C9—C13 | 1.512 (2) | C20—N6 | 1.143 (3) |
| C9—H23 | 1.089 (6) | C20—C19 | 1.414 (3) |
| C9—H24 | 1.067 (5) | C21—N7 | 1.146 (3) |
| C10—N2 | 1.2931 (13) | C21—C19 | 1.424 (3) |
| C10—C8 | 1.5239 (19) | H22—C8 | 1.050 (4) |
| C10—C12 | 1.4765 (18) | H23—C9 | 1.089 (6) |
| C11—C8 | 1.533 (4) | H24—C9 | 1.067 (5) |
| C11—H25 | 1.046 (7) | H25—C11 | 1.046 (7) |
| C11—H26 | 1.129 (6) | H26—C11 | 1.129 (6) |
| C11—H27 | 1.093 (6) | H27—C11 | 1.093 (6) |
| C12—C10 | 1.4765 (18) | H28—N3 | 1.053 (2) |
| C12—C14 | 1.389 (2) | H29—C14 | 1.089 (3) |
| C12—C15 | 1.396 (2) | H30—C15 | 1.086 (3) |
| C13—O1 | 1.227 (3) | H31—C16 | 1.096 (3) |
| C13—N3 | 1.348 (2) | H32—C17 | 1.123 (3) |
| C13—C9 | 1.512 (2) | H33—N4 | 1.036 (5) |
| N3—N2—C10 | 116.61 (13) | H26—C11—H27 | 101.5 (5) |
| N2—N3—C13 | 125.87 (14) | C10—C12—C14 | 120.21 (13) |
| N2—N3—H28 | 107.6 (3) | C10—C12—C15 | 120.85 (13) |
| C13—N3—H28 | 126.3 (3) | C14—C12—C15 | 118.67 (14) |
| N5—N4—C18 | 119.54 (17) | O1—C13—N3 | 121.45 (18) |
| N5—N4—H33 | 103.7 (5) | O1—C13—C9 | 122.7 (2) |
| C18—N4—H33 | 115.4 (5) | N3—C13—C9 | 114.94 (16) |
| N4—N5—C19 | 120.3 (3) | C12—C14—C16 | 120.84 (13) |
| C9—C8—C10 | 108.08 (16) | C12—C14—H29 | 122.9 (3) |
| C9—C8—C11 | 108.0 (3) | C16—C14—H29 | 115.9 (3) |
| C10—C8—C11 | 110.1 (2) | C12—C15—C17 | 120.23 (17) |
| C9—C8—H22 | 108.9 (3) | C12—C15—H30 | 121.8 (3) |
| C10—C8—H22 | 112.4 (3) | C17—C15—H30 | 116.4 (3) |
| C11—C8—H22 | 109.2 (4) | C14—C16—C18 | 120.31 (14) |
| C8—C9—C13 | 110.80 (17) | C14—C16—H31 | 119.4 (3) |
| C8—C9—H23 | 110.0 (4) | C18—C16—H31 | 117.3 (3) |
| C13—C9—H23 | 107.9 (4) | C15—C17—C18 | 119.91 (15) |
| C8—C9—H24 | 112.4 (4) | C15—C17—H32 | 119.9 (3) |
| C13—C9—H24 | 104.9 (3) | C18—C17—H32 | 120.1 (3) |
| H23—C9—H24 | 110.7 (3) | N4—C18—C16 | 119.42 (19) |
| N2—C10—C8 | 123.04 (13) | N4—C18—C17 | 121.19 (19) |
| N2—C10—C12 | 117.21 (11) | C16—C18—C17 | 119.32 (13) |
| C8—C10—C12 | 119.53 (14) | N5—C19—C20 | 117.0 (3) |
| C8—C11—H25 | 116.5 (5) | N5—C19—C21 | 124.8 (4) |
| C8—C11—H26 | 111.5 (4) | C20—C19—C21 | 117.6 (3) |
| H25—C11—H26 | 103.9 (6) | N6—C20—C19 | 171.3 (8) |
| C8—C11—H27 | 110.5 (5) | N7—C21—C19 | 173.4 (7) |
| H25—C11—H27 | 111.8 (5) |
| C7H12O3 | c = 17.297 Å |
| Mr = 144.17 | V = 644.92 Å3 |
| Orthorhombic, P212121 | Z = 4 |
| a = 7.496 Å | Dx = 1.485 Mg m−3 |
| b = 4.974 Å | T = 295 K |
| Weighting scheme based on measured s.u.'s | Preferred orientation correction: March-Dollase correction coef. = 1.000 axis = [0, 0, 1] |
| x | y | z | Uiso*/Ueq | ||
| O1 | 0.20480 | 0.03280 | 0.05040 | 0.0300* | |
| C1 | 0.29980 | −0.03650 | 0.11820 | 0.0300* | |
| H1 | 0.31360 | −0.26400 | 0.11820 | 0.0300* | |
| H2 | 0.42090 | 0.09890 | 0.11820 | 0.0300* | |
| C2 | 0.20030 | 0.03650 | 0.19120 | 0.0300* | |
| H3 | 0.19650 | 0.26380 | 0.19120 | 0.0300* | |
| H4 | 0.07920 | −0.09000 | 0.19120 | 0.0300* | |
| C3 | 0.29980 | −0.03650 | 0.26440 | 0.0300* | |
| H5 | 0.31360 | −0.26400 | 0.26440 | 0.0300* | |
| H6 | 0.42090 | 0.09890 | 0.26440 | 0.0300* | |
| C4 | 0.20030 | 0.03650 | 0.33740 | 0.0300* | |
| H7 | 0.19650 | 0.26390 | 0.33740 | 0.0300* | |
| H8 | 0.07920 | −0.09000 | 0.33740 | 0.0300* | |
| C5 | 0.29980 | −0.03650 | 0.41060 | 0.0300* | |
| H9 | 0.31360 | −0.26400 | 0.41060 | 0.0300* | |
| H10 | 0.42090 | 0.09890 | 0.41060 | 0.0300* | |
| C6 | 0.20030 | 0.03650 | 0.48360 | 0.0300* | |
| O2 | 0.05230 | 0.14480 | 0.48360 | 0.0300* | |
| O1A | 0.29520 | −0.03280 | 0.55040 | 0.0300* | |
| C1A | 0.20020 | 0.03650 | 0.61820 | 0.0300* | |
| H1A | 0.18640 | 0.26400 | 0.61820 | 0.0300* | |
| H2A | 0.07910 | −0.09890 | 0.61820 | 0.0300* |
| C14H12N6O | b = 10.29094 Å |
| Mr = 280.29 | c = 19.98971 Å |
| Orthorhombic, P212121 | V = 1415.54 Å3 |
| a = 6.88115 Å | Z = 4 |
| x | y | z | Biso*/Beq | ||
| O1 | 0.34351 | 0.33805 | 0.22507 | ||
| N2 | 0.28900 | 0.60145 | 0.11095 | ||
| N3 | 0.28810 | 0.52338 | 0.16675 | ||
| N4 | 0.27168 | 0.85295 | −0.18238 | ||
| N5 | 0.29933 | 0.97759 | −0.18229 | ||
| N6 | 0.34215 | 1.29512 | −0.22840 | ||
| N7 | 0.22055 | 0.96110 | −0.35824 | ||
| C8 | 0.31576 | 0.39820 | 0.04687 | ||
| C9 | 0.42698 | 0.34320 | 0.10668 | ||
| C10 | 0.30419 | 0.54453 | 0.05297 | ||
| C11 | 0.11116 | 0.33915 | 0.04198 | ||
| C12 | 0.29947 | 0.62633 | −0.00706 | ||
| C13 | 0.34862 | 0.39764 | 0.17079 | ||
| C14 | 0.28420 | 0.56979 | −0.07082 | ||
| C15 | 0.30634 | 0.76323 | −0.00282 | ||
| C16 | 0.27334 | 0.64546 | −0.12807 | ||
| C17 | 0.29846 | 0.83982 | −0.05964 | ||
| C18 | 0.28114 | 0.78090 | −0.12276 | ||
| C19 | 0.29182 | 1.04651 | −0.23869 | ||
| C20 | 0.32028 | 1.18248 | −0.23230 | ||
| C21 | 0.25313 | 0.99842 | −0.30401 | ||
| H22 | 0.39645 | 0.37319 | 0.00131 | ||
| H23 | 0.58198 | 0.37094 | 0.10442 | ||
| H24 | 0.41902 | 0.23681 | 0.10891 | ||
| H25 | 0.02325 | 0.36380 | 0.08617 | ||
| H26 | 0.03436 | 0.37420 | −0.00270 | ||
| H27 | 0.12325 | 0.23276 | 0.03974 | ||
| H28 | 0.24712 | 0.57130 | 0.20980 | ||
| H29 | 0.27870 | 0.46472 | −0.07700 | ||
| H30 | 0.31818 | 0.80872 | 0.04627 | ||
| H31 | 0.25751 | 0.60048 | −0.17707 | ||
| H32 | 0.30544 | 0.94518 | −0.05562 | ||
| H33 | 0.24029 | 0.80072 | −0.22589 |
| D—H···A | D—H | H···A | D···A | D—H···A |
| N4—H33···O1 | 1.045 | 1.826 | 2.813 | 156.1 |
| N4—H33···C21 | 1.045 | 2.566 | 2.858 | 95.2 |
| N3—H28···N6 | 1.031 | 1.948 | 2.947 | 162.3 |
| C16—H31···O1 | 1.089 | 2.170 | 3.049 | 136.0 |
| C15—H30···N2 | 1.090 | 2.502 | 2.821 | 95.3 |
| C9—H24···N7 | 1.097 | 2.346 | 3.366 | 153.9 |
| D—H···A | D—H | H···A | D···A | D—H···A | Mulliken overlap |
| N4—H33···O1 | 1.045 | 1.826 | 2.813 | 156.1 | 0.058 |
| N4—H33···C21 | 1.045 | 2.566 | 2.858 | 95.2 | 0.011 |
| N3—H28···N6 | 1.031 | 1.948 | 2.947 | 162.3 | 0.048 |
| C16—H31···O1 | 1.089 | 2.170 | 3.049 | 136.0 | 0.031 |
| C15—H30···N2 | 1.090 | 2.502 | 2.821 | 95.3 | 0.014 |
| C9—H24···N7 | 1.097 | 2.346 | 3.366 | 153.9 | 0.016 |
Acknowledgements
Use of the Advanced Photon Source at Argonne National Laboratory was supported by the US Department of Energy, Office of Science, Office of Basic Energy Sciences, under Contract No. DE-AC02-06CH11357. We thank Saul Lapidus for his assistance in the data collection. We also thank the ICDD team – Megan Rost, Steve Trimble, and Dave Bohnenberger – for their contribution to research, sample preparation, and in-house XRD data collection and verification.
Funding information
Funding for this research was provided by: International Centre for Diffraction Data (grant No. 09-03).
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