research communications\(\def\hfill{\hskip 5em}\def\hfil{\hskip 3em}\def\eqno#1{\hfil {#1}}\)

Journal logoCRYSTALLOGRAPHIC
COMMUNICATIONS
ISSN: 2056-9890

Synthesis, crystal structure determination, Hirshfeld surface and crystal void analyses, inter­action energy calculations and energy frameworks of N-(2-methyl­phen­yl)-N′-pivaloyl­thio­urea

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aDepartment of Chemistry, Yenepoya Institute of Arts, Science, Commerce and Management, Mangaluru, Yenepoya University (Deemed to be university), 575013 Karnataka, India, and bHacettepe University, Department of Physics, 06800 Beytepe-Ankara, Türkiye
*Correspondence e-mail: [email protected]

Edited by M. Weil, Vienna University of Technology, Austria (Received 4 August 2026; accepted 26 August 2026; online 3 September 2026)

The title compound [systematic name: 3-(2,2-di­methyl­propano­yl)-1-(2-methyl­phen­yl)thio­urea], C13H18N2OS, consists of methyl­phenyl and pivaloyl moieties attached to the N atoms of thio­urea. The latter is twisted by 78.08 (10)° with respect to the phenyl ring. An intra­molecular N—H⋯O hydrogen bond with an S(6) ring motif consolidates the mol­ecular conformation. In the crystal, C—H⋯S hydrogen bonds link two mol­ecules, enclosing R22(14) ring motifs, into centrosymmetric dimers. Furthermore, ππ stacking and C—H⋯π(ring) inter­actions are present. Hirshfeld surface analysis revealed that the most important contributions to the crystal packing are from H⋯H (62.4%), H⋯S/S⋯H (13.6%) and H⋯C/C⋯H (12.9%) inter­actions. The volume of the crystal voids and the percentage of free space were calculated to be 91.57 Å3 and 13.35%, showing that there is no large cavity in the crystal packing. A C—H⋯S hydrogen-bonding energy of −5.4 kJ mol−1 was calculated. Evaluation of the electrostatic, dispersion and total energy frameworks indicates that the packing is dominated by dispersion energy contributions.

1. Chemical context

N-substituted N-acyl­thio­ureas are important synthetic inter­mediates for the preparation of a variety of heterocyclic compounds through cyclization reactions (Saeed et al., 2016View full citation; Aly et al., 2016View full citation). They have also attracted considerable inter­est as precursors for anion receptors (Blažek Bregovic et al., 2015View full citation; Zhang et al., 2006View full citation), organocatalysts (Guang et al., 2015View full citation; Mao et al., 2013View full citation; Saeed et al., 2017View full citation), corrosion inhibitors (Al-Abbassi et al., 2023View full citation), and non-ionic surfactants (Ullah et al., 2015View full citation). Moreover, numerous acyl­thio­urea derivatives exhibit a broad spectrum of biological activities, including anti­convulsant (Bielenica et al., 2016View full citation), anti­cancer (Ruswantor et al., 2015View full citation; Kumar & Chimni, 2015View full citation; Ribeiro et al., 2023View full citation), anti­diabetic (Faidullah et al., 2011View full citation), anti-inflammatory (Canatar et al., 2023View full citation; Mohamed et al., 2021View full citation), anti-HIV (Singh & Ganguly, 2018View full citation), anti­microbial (Zhong et al., 2008View full citation; Aher et al., 2009View full citation), urease inhibitory (Khan et al., 2014View full citation), herbicidial (Xu et al., 2003aView full citation), and insecticidal (Xu et al., 2003bView full citation) activities. Thio­urea derivatives containing sulfur- and nitro­gen-donor atoms have also attracted considerable attention in medicinal chemistry owing to their inter­esting pharmacological properties. In particular, thio­urea-based compounds have been investigated as aromatase inhibitors for the treatment of estrogen-dependent breast cancer (Pingaew et al., 2018View full citation). Their anti­cancer activity has also been attributed to inter­ference with microtubule assemblies, leading to mitotic arrest and subsequent cell death (Anchoori et al., 2008View full citation). Moreover, several N-substituted phenyl­thio­ureas inhibit tyrosinase-mediated melanogenesis and have shown promising activity against melanoma and other hyperpigmentation disorders (Thanigaimalai et al., 2011View full citation).

[Scheme 1]

In the context given above, we studied the mol­ecular and crystal structures of the title compound (I) and also carried out Hirshfeld surface (HS) and crystal void analyses and calculations of its inter­action energy and energy frameworks.

2. Structural commentary

Compound (I) consists of methyl­phenyl and pivaloyl moieties attached to the N atoms of the central thio­urea group (Fig. 1[link]). An intra­molecular N—H⋯O hydrogen bond (Table 1[link]) with an S(6) ring motif (Etter et al., 1990View full citation) stabilizes the mol­ecular conformation (Fig. 2[link]).

Table 1
Hydrogen-bond geometry (Å, °)

Cg1 is the centroid of the C1–C6 ring.

D—H⋯A D—H H⋯A DA D—H⋯A
N1—H1N⋯O1 0.84 (2) 1.98 (3) 2.644 (3) 135 (3)
C11—H11A⋯S1i 0.96 2.79 3.663 (4) 152
C12—H12CCg1ii 0.96 2.92 3.640 (5) 133
Symmetry codes: (i) Mathematical equation; (ii) Mathematical equation.
[Figure 1]
Figure 1
The mol­ecular structure of (I) with displacement ellipsoids drawn at the 50% probability level.
[Figure 2]
Figure 2
A partial packing diagram of (I) viewed down the a axis showing the intra­molecular N—H⋯O [S(6) ring motif] and inter­molecular C—H⋯S hydrogen bonds [ R22(14) ring motif] as dashed lines.

The planar (O1/C8/C9/C12) and thio­urea (S1/C7/N1/N2) fragments [root-mean-square deviations of 0.017 (3) and 0.002 (2) Å, respectively] subtend a dihedral angle of 3.9 (1)°. The O1, C8, C9 and C12 atoms are 0.049 (2), −0.004 (3), −0.079 (3) and 0.037 (4) Å, respectively, away from the least-squares plane of the thio­urea group. The dihedral angles between the phenyl (C1–C6) ring and the (O1/C8/C9/C12) and thio­urea groups are 81.88 (13) and 78.08 (10)°, respectively. The C13 and N1 atoms are 0.061 (5) and 0.008 (3) Å away from the least-squares plane of the phenyl ring.

The bond lengths (Allen et al., 1987View full citation) and angles in the entire mol­ecule are in normal ranges and comparable to those in similar compounds; for a detailed comparison, see Section 4.

3. Supra­molecular features

In the crystal, weak C—H⋯S hydrogen bonds (Table 1[link]) link the mol­ecules, enclosing R22(14) ring motifs (Etter et al., 1990View full citation), into centrosymmetric dimers (Fig. 2[link]). Furthermore, C—H⋯π(ring) inter­actions (Table 1[link]) and weak ππ stacking inter­actions between parallel phenyl rings, with centroid-to-centroid distance of 4.134 (2) Å [dihedral angle α = 0.0 (2)° and slippage = 2.288 Å], help to consolidate the packing.

The inter­molecular inter­actions in the crystal were qu­anti­fied by a Hirshfeld surface (HS) analysis using CrystalExplorer (Spackman et al., 2021View full citation). Fig. 3[link] shows the HS mapped over dnorm where the white surface indicates contacts with distances equal to the sum of van der Waals radii, and the red and blue colours indicate distances shorter (in close contact) or longer (distinct contacts) than the van der Waals radii, respectively. The red spots indicate their roles as the respective donors and/or acceptors atoms in hydrogen-bonding inter­action, as discussed; they also appear as blue and red regions corresponding to positive and negative potentials on the HS mapped over electrostatic potential (Fig. 4[link]), indicating positive (hydrogen-bond donors) and negative (hydrogen-bond acceptors) electrostatic potentials. The ππ stacking and the C—H⋯π(ring) inter­actions are indicated in Fig. 5[link]a by the presence of adjacent red and blue triangles, and in Fig. 5[link]b by the presence of red π-holes.

[Figure 3]
Figure 3
View of the three-dimensional Hirshfeld surface plotted over dnorm.
[Figure 4]
Figure 4
View of the three-dimensional Hirshfeld surface of (I) plotted over electrostatic potential using the STO-3 G basis set at the Hartree–Fock level of theory. Hydrogen-bond donors and acceptors are shown as blue and red regions around the atoms, corresponding to positive and negative potentials, respectively.
[Figure 5]
Figure 5
Two orientations of the shape-index, showing (a) the ππ and (b) the C—H⋯π(ring) inter­actions.

The overall two-dimensional fingerprint plot is shown in Fig. 6[link]a, and those delineated into H⋯H, H⋯S/S⋯H, H⋯C/C⋯H, H⋯O/O⋯H, H⋯N/N⋯H and C⋯C inter­actions are illustrated in Fig. 6[link]b–g, respectively, revealing that H⋯H, H⋯S/S⋯H and H⋯C/C⋯H contacts make the most significant contributions to the HS.

[Figure 6]
Figure 6
The full two-dimensional fingerprint plots of (I), showing (a) all inter­actions, and delineated into (b) H⋯H, (c) H⋯S/S⋯H, (d) H⋯C/C⋯H, (e) H⋯O/O⋯H, (f) H⋯N/N⋯H and (g) C⋯C inter­actions. The di and de values are the closest inter­nal and external distances (in Å) from given points on the Hirshfeld surface.

A void analysis of the crystal packing (Fig. 7[link]) revealed the void volume and the percentage of free space in the unit cell to be 91.57 Å3 and 13.35%, respectively, which indicates a rather compact packing of mol­ecules in the crystal.

[Figure 7]
Figure 7
Crystal voids viewed down the (a) a axis and (b) b axis.

Inter­molecular inter­action energies were calculated using the CE–B3LYP/6–31G(d,p) energy model available in CrystalExplorer (Spackman et al., 2021View full citation), where a cluster of mol­ecules is generated by applying crystallographic symmetry operations with respect to a selected central mol­ecule within the radius of 3.8 Å by default. The total inter­molecular energy (Etot) is the sum of electrostatic (Eele), polarization (Epol), dispersion (Edis) and exchange-repulsion (Erep) energies (Turner et al., 2015View full citation) with scale factors of 1.057, 0.740, 0.871 and 0.618, respectively (Mackenzie et al., 2017View full citation). Hydrogen-bonding inter­action energies (in kJ mol−1) were calculated to be −0.6 (Eele), −0.3 (Epol), −8.7 (Edis), 4.9 (Erep) and −5.4 (Etot) for the C11—H11A⋯S1 hydrogen-bonding inter­action.

Energy frameworks combine the calculation of inter­molecular inter­action energies with a graphical representation of their magnitudes, in which they were constructed for Eele (red cylinders), Edis (green cylinders) and Etot (blue cylinders), as shown in Fig. 8[link]a, b and c. The evaluation of the electrostatic, dispersion and total energy frameworks indicates that the stabilization in the crystal structure is dominated via the dispersion energy contributions.

[Figure 8]
Figure 8
The energy frameworks for a cluster of mol­ecules viewed down the c axis showing the (a) electrostatic energy, (b) dispersion energy and (c) total energy diagrams. The cylindrical radius is proportional to the relative strength of the corresponding energies and they were adjusted to the same scale factor of 80 with cut-off value of 5 kJ mol−1 within 2×2×2 unit cells.

4. Database survey

A search of the Cambridge Structural Database (CSD, Version 6.00, updated May 2025; Groom et al., 2016View full citation) revealed six structures closely related to N-(2-methyl­phen­yl)-N′-pivaloyl­thio­urea. These include 1-(3-nitro­phen­yl)-3-pivaloyl­thio­urea, C12H15N3O3S [CSD refcode RIZCUZ; (II) Yusof et al., 2008View full citation], 1-(2-nitro­phen­yl)-3-pivaloyl­thio­urea, C12H15N3O3S [GINDEN; (III) Saeed & Flörke, 2007aView full citation], 1-(2,4-di­chloro­phen­yl)-3-pivaloyl­thio­urea, C12H14Cl2N2OS [HIRDOC; (IV) Saeed & Flörke, 2007bView full citation], 1-(3-bromo­phen­yl)-3-pivaloyl­thio­urea, C12H15BrN2OS [CICREM; (V) Sultana et al., 2007aView full citation], 1-(4-nitro­phen­yl)-3-pivaloyl­thio­urea, C12H15N3O3S [GIHFOT; (VI) Sultana et al., 2007bView full citation] and 1-(3-chloro­phen­yl)-3-pivaloyl­thio­urea, C12H15ClN2OS [WIHBAR; (VII) Shoukat et al., 2007View full citation],

In the title compound (I), the C2—C1—C6 bond angle [122.8 (3)°] is wider than the corresponding ones in compounds (II)–(VI), and the N1—C7—N2 bond angle (116.4 (2)°) is also wider than those in compounds (IVVI). On the other hand, the C1—N1—C7 bond angle [123.3 (2)°) is narrowed with respect to those in compounds (III), (IV) and (VI), and the S1—C7—N1 bond angle [124.4 (2)]) is also narrowed relative to those in compounds (IV) and (VI).

5. Synthesis and crystallization

Compound (I) was synthesized by adding a solution of pivaloyl chloride (0.10 mol) in acetone (30 ml) dropwise to a suspension of ammonium thio­cyanate (0.10 mol) in acetone (30 ml). The resulting reaction mixture was stirred for 2 h, and then refluxed for 30 min. After cooling to room temperature, a solution of 2-methyl­aniline (0.10 mol) in acetone (10 ml) was added, and the reaction mixture was refluxed for 3 h. The progress of the reaction was monitored by thin-layer chromatography (TLC). Upon completion, the reaction mixture was poured into cold acidified water (5%wt HCl). The precipitated solid was collected by vacuum filtration, washed thoroughly with water, and dried. White solid, yield 82%, m.p. 371–373 K. IR (KBr) cm−1: 3347 (N—H str.), 1179 (C=S str.) and 1681 (C=O str.). 1H NMR (400 MHz, CDCl3-d6): δ (ppm) 12.03 (s, 1H), 8.50 (s, 1H), 7.25–7.62 (m, 4H, Ar-H 2-methyl­phenyl ring), 2.34 (s, 3H, CH3), 1.30 [s, 9H, (CH3)3], 13C NMR (400 MHz, CDCl3-d6): δ (ppm) 27.1, 21.0, 134.8, 124.3, 129.4, 136.9, 129.4, 121.3, 171.0, 178.4. Colourless crystals suitable for single-crystal X-ray diffraction analysis were obtained by slow evaporation of an aceto­nitrile solution at room temperature.

6. Refinement

Crystal data, data collection and structure refinement details are summarized in Table 2[link]. Three reflections were omitted from the final refinement cycles, and similarity restraints applied to some of the C atoms of the phenyl ring. Hydrogen atoms attached to the N atoms of thio­urea were located from difference-Fourier maps and refined with a distance restraint of N—H = 0.86 (2) Å, and with Uiso(H) = 1.2Ueq(N). The C-bound hydrogen-atom positions were calculated geometrically at distances of 0.93 Å (aromatic) and 0.96 Å (meth­yl) and refined using a riding model.

Table 2
Experimental details

Crystal data
Chemical formula C13H18N2OS
Mr 250.35
Crystal system, space group Triclinic, PMathematical equation
Temperature (K) 293
a, b, c (Å) 6.1050 (4), 10.7020 (3), 11.8910 (3)
α, β, γ (°) 63.290 (4), 81.600 (3), 84.340 (4)
V3) 686.08 (6)
Z 2
Radiation type Mo Kα
μ (mm−1) 0.22
Crystal size (mm) 0.50 × 0.48 × 0.16
 
Data collection
Diffractometer Oxford Diffraction Xcalibur with Sapphire CCD Detector
Absorption correction Multi-scan (CrysAlis RED; Oxford Diffraction, 2009View full citation)
Tmin, Tmax 0.897, 0.965
No. of measured, independent and observed [I > 2σ(I)] reflections 4335, 2756, 2287
Rint 0.010
(sin θ/λ)max−1) 0.625
 
Refinement
R[F2 > 2σ(F2)], wR(F2), S 0.064, 0.164, 1.16
No. of reflections 2756
No. of parameters 160
No. of restraints 3
H-atom treatment H atoms treated by a mixture of independent and constrained refinement
Δρmax, Δρmin (e Å−3) 0.71, −0.24
Computer programs: CrysAlis CCD and CrysAlis RED (Oxford Diffraction, 2009View full citation), SHELXT (Sheldrick, 2015aView full citation), SHELXL (Sheldrick, 2015bView full citation) and ORTEP-3 for Windows and WinGX (Farrugia, 2012View full citation).

Supporting information


Computing details top

3-(2,2-Dimethylpropanoyl)-1-(2-methylphenyl)thiourea top
Crystal data top
C13H18N2OSZ = 2
Mr = 250.35F(000) = 268
Triclinic, P1Dx = 1.212 Mg m3
a = 6.1050 (4) ÅMo Kα radiation, λ = 0.71073 Å
b = 10.7020 (3) ÅCell parameters from 2155 reflections
c = 11.8910 (3) Åθ = 3.4–27.7°
α = 63.290 (4)°µ = 0.22 mm1
β = 81.600 (3)°T = 293 K
γ = 84.340 (4)°Prism, colourless
V = 686.08 (6) Å30.50 × 0.48 × 0.16 mm
Data collection top
Oxford Diffraction Xcalibur with Sapphire CCD Detector
diffractometer
2287 reflections with I > 2σ(I)
Rotation method data acquisition using ω scans.Rint = 0.010
Absorption correction: multi-scan
(CrysAlis RED; Oxford Diffraction, 2009)
θmax = 26.4°, θmin = 3.4°
Tmin = 0.897, Tmax = 0.965h = 77
4335 measured reflectionsk = 1313
2756 independent reflectionsl = 1014
Refinement top
Refinement on F23 restraints
Least-squares matrix: fullHydrogen site location: mixed
R[F2 > 2σ(F2)] = 0.064H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.164 w = 1/[σ2(Fo2) + (0.0561P)2 + 0.6536P]
where P = (Fo2 + 2Fc2)/3
S = 1.16(Δ/σ)max < 0.001
2756 reflectionsΔρmax = 0.71 e Å3
160 parametersΔρmin = 0.24 e Å3
Special details top

Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/Ueq
C10.6535 (6)0.0041 (3)0.7571 (3)0.0553 (8)
C20.4729 (6)0.0708 (3)0.7789 (3)0.0582 (8)
C30.4096 (7)0.1702 (4)0.9074 (3)0.0694 (10)
H30.2854780.2232530.9270430.083*
C40.5310 (8)0.1862 (4)0.9995 (4)0.0765 (11)
H40.4865870.2503641.0822420.092*
C50.7150 (8)0.1130 (4)0.9772 (3)0.0817 (12)
H50.7958260.1289531.0431720.098*
C60.7811 (7)0.0141 (4)0.8549 (3)0.0712 (10)
H60.9049890.0385260.8373130.085*
C70.6455 (4)0.2367 (3)0.5778 (2)0.0404 (6)
C80.9416 (4)0.3001 (3)0.3944 (2)0.0407 (6)
C91.0284 (5)0.4254 (3)0.2737 (3)0.0441 (6)
C100.8441 (6)0.4912 (4)0.1868 (3)0.0629 (9)
H10A0.7223870.5228790.2295620.094*
H10B0.9004470.5690740.1105020.094*
H10C0.7943610.4226140.1658980.094*
C111.1069 (6)0.5315 (4)0.3110 (4)0.0657 (9)
H11A0.9841750.5626790.3536910.099*
H11B1.2199450.4883070.3665340.099*
H11C1.1657920.6101730.2362910.099*
C121.2214 (6)0.3751 (4)0.2060 (4)0.0735 (11)
H12A1.2777790.4530310.1297520.110*
H12B1.3364650.3340070.2603800.110*
H12C1.1716360.3065940.1850950.110*
C130.3526 (7)0.0550 (4)0.6784 (4)0.0762 (10)
H13A0.2307830.1167510.7124680.114*
H13B0.2971750.0399740.6369920.114*
H13C0.4490450.0777430.6182790.114*
N10.7287 (4)0.1062 (2)0.6302 (2)0.0503 (6)
N20.7550 (4)0.3273 (2)0.4621 (2)0.0441 (6)
O11.0292 (3)0.1835 (2)0.4296 (2)0.0567 (6)
S10.42204 (13)0.29558 (7)0.64054 (7)0.0537 (3)
H1N0.841 (4)0.084 (4)0.592 (3)0.064*
H2N0.703 (6)0.411 (2)0.434 (3)0.064*
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
C10.066 (2)0.0377 (14)0.0473 (16)0.0103 (13)0.0110 (14)0.0129 (12)
C20.066 (2)0.0470 (16)0.0556 (18)0.0094 (15)0.0014 (15)0.0217 (14)
C30.084 (3)0.0492 (18)0.057 (2)0.0141 (17)0.0096 (18)0.0166 (16)
C40.094 (3)0.062 (2)0.055 (2)0.016 (2)0.007 (2)0.0182 (17)
C50.108 (3)0.074 (2)0.0485 (17)0.021 (2)0.0178 (19)0.0174 (15)
C60.093 (3)0.061 (2)0.0482 (16)0.0275 (18)0.0149 (17)0.0186 (13)
C70.0446 (14)0.0353 (13)0.0340 (13)0.0004 (11)0.0000 (11)0.0106 (10)
C80.0368 (13)0.0431 (14)0.0385 (14)0.0004 (11)0.0010 (11)0.0161 (11)
C90.0429 (14)0.0396 (14)0.0414 (14)0.0011 (11)0.0065 (11)0.0139 (11)
C100.072 (2)0.064 (2)0.0398 (16)0.0038 (17)0.0042 (15)0.0138 (15)
C110.059 (2)0.061 (2)0.076 (2)0.0176 (16)0.0085 (17)0.0317 (18)
C120.069 (2)0.061 (2)0.066 (2)0.0026 (17)0.0296 (17)0.0180 (17)
C130.082 (3)0.065 (2)0.074 (2)0.0051 (19)0.004 (2)0.0240 (19)
N10.0527 (14)0.0404 (12)0.0407 (13)0.0072 (11)0.0092 (11)0.0088 (10)
N20.0442 (12)0.0354 (11)0.0394 (12)0.0033 (9)0.0058 (10)0.0088 (10)
O10.0537 (12)0.0438 (11)0.0547 (12)0.0094 (9)0.0079 (10)0.0123 (9)
S10.0573 (5)0.0395 (4)0.0482 (4)0.0048 (3)0.0144 (3)0.0124 (3)
Geometric parameters (Å, º) top
C1—C21.353 (5)C9—C121.521 (4)
C1—C61.424 (5)C9—C111.529 (4)
C1—N11.448 (4)C9—C101.536 (4)
C2—C131.430 (5)C10—H10A0.9600
C2—C31.436 (5)C10—H10B0.9600
C3—C41.350 (6)C10—H10C0.9600
C3—H30.9300C11—H11A0.9600
C4—C51.358 (6)C11—H11B0.9600
C4—H40.9300C11—H11C0.9600
C5—C61.388 (5)C12—H12A0.9600
C5—H50.9300C12—H12B0.9600
C6—H60.9300C12—H12C0.9600
C7—N11.329 (3)C13—H13A0.9600
C7—N21.393 (3)C13—H13B0.9600
C7—S11.665 (3)C13—H13C0.9600
C8—O11.218 (3)N1—H1N0.840 (18)
C8—N21.381 (3)N2—H2N0.852 (18)
C8—C91.525 (4)
C2—C1—C6122.8 (3)C9—C10—H10A109.5
C2—C1—N1120.5 (3)C9—C10—H10B109.5
C6—C1—N1116.7 (3)H10A—C10—H10B109.5
C1—C2—C13121.8 (3)C9—C10—H10C109.5
C1—C2—C3117.1 (3)H10A—C10—H10C109.5
C13—C2—C3121.1 (4)H10B—C10—H10C109.5
C4—C3—C2119.7 (4)C9—C11—H11A109.5
C4—C3—H3120.2C9—C11—H11B109.5
C2—C3—H3120.2H11A—C11—H11B109.5
C3—C4—C5123.2 (4)C9—C11—H11C109.5
C3—C4—H4118.4H11A—C11—H11C109.5
C5—C4—H4118.4H11B—C11—H11C109.5
C4—C5—C6119.4 (4)C9—C12—H12A109.5
C4—C5—H5120.3C9—C12—H12B109.5
C6—C5—H5120.3H12A—C12—H12B109.5
C5—C6—C1117.9 (4)C9—C12—H12C109.5
C5—C6—H6121.0H12A—C12—H12C109.5
C1—C6—H6121.0H12B—C12—H12C109.5
N1—C7—N2116.4 (2)C2—C13—H13A109.5
N1—C7—S1124.4 (2)C2—C13—H13B109.5
N2—C7—S1119.26 (19)H13A—C13—H13B109.5
O1—C8—N2121.7 (2)C2—C13—H13C109.5
O1—C8—C9122.8 (2)H13A—C13—H13C109.5
N2—C8—C9115.5 (2)H13B—C13—H13C109.5
C12—C9—C8108.6 (2)C7—N1—C1123.3 (2)
C12—C9—C11110.0 (3)C7—N1—H1N119 (2)
C8—C9—C11108.3 (2)C1—N1—H1N117 (2)
C12—C9—C10109.5 (3)C8—N2—C7128.5 (2)
C8—C9—C10109.9 (2)C8—N2—H2N118 (2)
C11—C9—C10110.5 (3)C7—N2—H2N114 (2)
C6—C1—C2—C13177.3 (3)O1—C8—C9—C11115.0 (3)
N1—C1—C2—C131.3 (5)N2—C8—C9—C1165.0 (3)
C6—C1—C2—C31.2 (4)O1—C8—C9—C10124.2 (3)
N1—C1—C2—C3179.8 (3)N2—C8—C9—C1055.8 (3)
C1—C2—C3—C40.8 (5)N2—C7—N1—C1171.6 (3)
C13—C2—C3—C4177.7 (3)S1—C7—N1—C19.1 (5)
C2—C3—C4—C50.6 (6)C2—C1—N1—C784.0 (4)
C3—C4—C5—C61.6 (6)C6—C1—N1—C797.4 (4)
C4—C5—C6—C11.1 (5)O1—C8—N2—C73.5 (5)
C2—C1—C6—C50.3 (5)C9—C8—N2—C7176.5 (3)
N1—C1—C6—C5178.9 (3)N1—C7—N2—C80.8 (4)
O1—C8—C9—C124.4 (4)S1—C7—N2—C8179.9 (2)
N2—C8—C9—C12175.6 (3)
Hydrogen-bond geometry (Å, º) top
Cg1 is the centroid of the C1–C6 ring.
D—H···AD—HH···AD···AD—H···A
N1—H1N···O10.84 (2)1.98 (3)2.644 (3)135 (3)
C11—H11A···S1i0.962.793.663 (4)152
C12—H12C···Cg1ii0.962.923.640 (5)133
Symmetry codes: (i) x+1, y+1, z+1; (ii) x+2, y, z+1.
 

Acknowledgements

The authors thank the Yenepoya Deemed to be University for the facilities and financial support. TH is also grateful to Hacettepe University Scientific Research Project Unit (Grant No. 013 D04 602 004).

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