Structure of Bacteroides thetaiotaomicron BT2081 at 2.05 Å resolution: the first structural representative of a new protein family that may play a role in carbohydrate metabolism

Yeh, A.P.; Abdubek, P.; Astakhova, T.; Axelrod, H.L.; Bakolitsa, C.; Cai, X.; Carlton, D.; Chen, C.; Chiu, H.-J.; Chiu, M.; Clayton, T.; Das, D.; Deller, M.C.; Duan, L.; Ellrott, K.; Farr, C.L.; Feuerhelm, J.; Grant, J.C.; Grzechnik, A.; Han, G.W.; Jaroszewski, L.; Jin, K.K.; Klock, H.E.; Knuth, M.W.; Kozbial, P.; Krishna, S.S.; Kumar, A.; Lam, W.W.; Marciano, D.; McMullan, D.; Miller, M.D.; Morse, A.T.; Nigoghossian, E.; Nopakun, A.; Okach, L.; Puckett, C.; Reyes, R.; Tien, H.J.; Trame, C.B.; van den Bedem, H.; Weekes, D.; Wooten, T.; Xu, Q.; Hodgson, K.O.; Wooley, J.; Elsliger, M.-A.; Deacon, A.M.; Godzik, A.; Lesley, S.A.; Wilson, I.A.

doi:10.1107/S1744309110028228

Acta Crystallographica Section F
Acta Crystallographica
Section F STRUCTURAL BIOLOGY COMMUNICATIONS

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Figure 2
Structural comparison of BT2081 with PKD-CBM44 of C. thermocellum CtCel9D-Cel44A. Superposition of BT2081 (orange/yellow) with PKD-CBM44 (lilac/pale blue; PDB code 2c26 ), which also contain both the Ig-like and β-jelly-roll domains. Calcium ions are represented as spheres. Protein regions which were used for alignment by FATCAT are shown in darker shades (orange for BT2081 and lilac for PKD-CBM44) to highlight similarities in the protein cores. Please note that two twists have been introduced by FATCAT into the structure of PKD-CBM44 in order to obtain optimal full-length alignments of the structures.

STRUCTURAL BIOLOGY
COMMUNICATIONS

ISSN: 2053-230X

Volume 66| Part 10| August 2010| Pages 1287-1296

doi:10.1107/S1744309110028228

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