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Figure 3
The HDF tree structure for a prepared data file and a single reconstruction file. The prepared data file, written by the data preparator, appends a new group of data and positions for each scan and the corresponding detector settings to the detector group. The reconstruction file uses an external link to provide direct access to the used prepared data, and internal soft symbolic links to access object and probe slices of subscans, indicated by pink and green arrows, respectively.

Journal logoJOURNAL OF
APPLIED
CRYSTALLOGRAPHY
ISSN: 1600-5767
Volume 53| Part 2| April 2020| Pages 574-586
https://doi.org/10.1107/S1600576720001776
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