findMySequence: a neural-network-based approach for identification of unknown proteins in X-ray crystallography and cryo-EM

Chojnowski, G.; Simpkin, A.J.; Leonardo, D.A.; Seifert-Davila, W.; Vivas-Ruiz, D.E.; Keegan, R.M.; Rigden, D.J.

doi:10.1107/S2052252521011088

Figure 5
Fragment of an S21 protein model from E. coli 70S ribosome at 3.0 Å resolution (PDB ID/EMDB ID 5we4/8814). (a) In the deposited coordinates, many side chains outside a well resolved map and a proline inside a regular alpha helix may raise suspicion. (b) After sequence re-assignment and side-chain rebuilding with findMySequence, the map features are better explained by the model. Only residue range 34–44 in chain u and a corresponding map are shown for clarity.

IUCrJ

Volume 9| Part 1| January 2022| Pages 86-97

ISSN: 2052-2525

https://doi.org/10.1107/S2052252521011088

CRYO | EM

Open

access

Follow IUCrJ

Search IUCr Journals		doi		Advanced search
Author		volume	page