The molecule of the title compound, C
10H
20N
2O
4, lies on an inversion centre. The crystal structure is stabilized by intermolecular N—H
O classical hydrogen bonds, which pack the molecules along the short [100] axis.
Supporting information
CCDC reference: 629431
Key indicators
- Single-crystal X-ray study
- T = 293 K
- Mean (C-C) = 0.002 Å
- R factor = 0.046
- wR factor = 0.127
- Data-to-parameter ratio = 12.6
checkCIF/PLATON results
No syntax errors found
Alert level C
PLAT066_ALERT_1_C Predicted and Reported Transmissions Identical . ?
PLAT242_ALERT_2_C Check Low Ueq as Compared to Neighbors for C2
PLAT390_ALERT_3_C Deviating Methyl C1 X-C-H Bond Angle ...... 117.00 Deg.
PLAT720_ALERT_4_C Number of Unusual/Non-Standard Label(s) ........ 3
Alert level G
PLAT199_ALERT_1_G Check the Reported _cell_measurement_temperature 293 K
PLAT200_ALERT_1_G Check the Reported _diffrn_ambient_temperature . 293 K
0 ALERT level A = In general: serious problem
0 ALERT level B = Potentially serious problem
4 ALERT level C = Check and explain
2 ALERT level G = General alerts; check
3 ALERT type 1 CIF construction/syntax error, inconsistent or missing data
1 ALERT type 2 Indicator that the structure model may be wrong or deficient
1 ALERT type 3 Indicator that the structure quality may be low
1 ALERT type 4 Improvement, methodology, query or suggestion
0 ALERT type 5 Informative message, check
Data collection: RAPID-AUTO (Rigaku/MSC, 2004); cell refinement: RAPID-AUTO; data reduction: CrystalStructure (Rigaku/MSC, 2004); program(s) used to solve structure: SHELXS97 (Sheldrick, 1997a); program(s) used to refine structure: SHELXL97 (Sheldrick, 199a7); molecular graphics: SHELXTL (Sheldrick, 1997b); software used to prepare material for publication: SHELXL97.
Dimethyl
N,
N'-(hexane-1,6-diyl)dicarbamate
top
Crystal data top
C10H20N2O4 | F(000) = 252 |
Mr = 232.28 | Dx = 1.235 Mg m−3 |
Monoclinic, P21/n | Melting point: 385.2 K |
Hall symbol: -P 2yn | Mo Kα radiation, λ = 0.71073 Å |
a = 5.029 (1) Å | Cell parameters from 4225 reflections |
b = 23.674 (5) Å | θ = 3.4–27.5° |
c = 5.2550 (11) Å | µ = 0.10 mm−1 |
β = 93.56 (3)° | T = 293 K |
V = 624.4 (2) Å3 | Plate, colourless |
Z = 2 | 0.32 × 0.22 × 0.09 mm |
Data collection top
Rigaku R-AXIS RAPID IP diffractometer | 1432 independent reflections |
Radiation source: rotating anode | 1023 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.070 |
ω scans | θmax = 27.5°, θmin = 3.4° |
Absorption correction: multi-scan (ABSCOR; Higashi, 1995) | h = −6→6 |
Tmin = 0.970, Tmax = 0.991 | k = −30→30 |
6072 measured reflections | l = −6→6 |
Refinement top
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.046 | Only H-atom coordinates refined |
wR(F2) = 0.127 | w = 1/[σ2(Fo2) + (0.0521P)2 + 0.0675P] where P = (Fo2 + 2Fc2)/3 |
S = 1.04 | (Δ/σ)max = 0.001 |
1432 reflections | Δρmax = 0.13 e Å−3 |
114 parameters | Δρmin = −0.16 e Å−3 |
0 restraints | Extinction correction: SHELXL97, Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.055 (16) |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | Occ. (<1) |
N1 | 0.7790 (2) | 0.12437 (5) | 0.5670 (3) | 0.0532 (4) | |
H1D | 0.620 (4) | 0.1315 (7) | 0.606 (3) | 0.064* | |
O1 | 0.8910 (2) | 0.18616 (5) | 0.8688 (2) | 0.0629 (4) | |
O2 | 1.2114 (2) | 0.14174 (6) | 0.6695 (3) | 0.0774 (5) | |
C1 | 1.0899 (5) | 0.21685 (11) | 1.0195 (5) | 0.0783 (6) | |
H1A | 1.150 (13) | 0.251 (3) | 0.910 (12) | 0.117* | 0.53 (4) |
H1B | 1.266 (15) | 0.200 (2) | 1.039 (14) | 0.117* | 0.53 (4) |
H1C | 1.016 (12) | 0.231 (3) | 1.161 (12) | 0.117* | 0.53 (4) |
H1A' | 1.253 (16) | 0.223 (3) | 0.938 (14) | 0.117* | 0.47 (4) |
H1B' | 1.157 (14) | 0.194 (3) | 1.184 (14) | 0.117* | 0.47 (4) |
H1C' | 1.019 (13) | 0.255 (3) | 1.052 (16) | 0.117* | 0.47 (4) |
C2 | 0.9798 (3) | 0.14966 (6) | 0.6983 (3) | 0.0480 (4) | |
C3 | 0.8295 (3) | 0.08099 (7) | 0.3823 (3) | 0.0544 (4) | |
H3A | 0.927 (3) | 0.0494 (7) | 0.470 (3) | 0.065* | |
H3B | 0.951 (4) | 0.0943 (7) | 0.264 (3) | 0.065* | |
C4 | 0.5770 (3) | 0.05978 (7) | 0.2470 (3) | 0.0522 (4) | |
H4A | 0.493 (3) | 0.0901 (7) | 0.152 (3) | 0.063* | |
H4B | 0.454 (3) | 0.0482 (7) | 0.370 (3) | 0.063* | |
C5 | 0.6252 (3) | 0.01175 (7) | 0.0669 (3) | 0.0512 (4) | |
H5A | 0.719 (3) | −0.0187 (7) | 0.158 (3) | 0.061* | |
H5B | 0.738 (3) | 0.0236 (7) | −0.057 (3) | 0.061* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
N1 | 0.0382 (6) | 0.0586 (7) | 0.0628 (8) | 0.0020 (5) | 0.0016 (5) | −0.0157 (6) |
O1 | 0.0540 (6) | 0.0675 (7) | 0.0667 (7) | −0.0007 (5) | 0.0011 (5) | −0.0227 (5) |
O2 | 0.0392 (6) | 0.0997 (10) | 0.0929 (10) | 0.0008 (5) | 0.0005 (5) | −0.0348 (7) |
C1 | 0.0788 (14) | 0.0812 (14) | 0.0741 (14) | −0.0173 (12) | −0.0017 (11) | −0.0290 (11) |
C2 | 0.0428 (7) | 0.0484 (7) | 0.0526 (8) | 0.0023 (6) | −0.0002 (6) | −0.0042 (6) |
C3 | 0.0433 (8) | 0.0593 (9) | 0.0602 (10) | 0.0025 (7) | 0.0012 (6) | −0.0125 (7) |
C4 | 0.0425 (8) | 0.0583 (9) | 0.0554 (9) | 0.0023 (6) | −0.0004 (6) | −0.0077 (7) |
C5 | 0.0407 (7) | 0.0575 (8) | 0.0552 (9) | 0.0021 (6) | 0.0020 (6) | −0.0074 (7) |
Geometric parameters (Å, º) top
N1—C2 | 1.3294 (18) | C1—H1C' | 0.99 (7) |
N1—C3 | 1.4463 (19) | C3—C4 | 1.503 (2) |
N1—H1D | 0.855 (19) | C3—H3A | 0.994 (17) |
O1—C2 | 1.3408 (17) | C3—H3B | 0.954 (18) |
O1—C1 | 1.434 (2) | C4—C5 | 1.509 (2) |
O2—C2 | 1.1987 (18) | C4—H4A | 0.955 (17) |
C1—H1A | 1.04 (6) | C4—H4B | 0.962 (18) |
C1—H1B | 0.97 (7) | C5—C5i | 1.510 (3) |
C1—H1C | 0.92 (7) | C5—H5A | 0.970 (17) |
C1—H1A' | 0.96 (8) | C5—H5B | 0.935 (18) |
C1—H1B' | 1.06 (7) | | |
| | | |
C2—N1—C3 | 120.59 (12) | H1A'—C1—H1C' | 105 (5) |
C2—N1—H1D | 118.4 (12) | H1B'—C1—H1C' | 116 (5) |
C3—N1—H1D | 120.6 (12) | O2—C2—N1 | 125.22 (14) |
C2—O1—C1 | 116.48 (14) | O2—C2—O1 | 123.46 (13) |
O1—C1—H1A | 107 (3) | N1—C2—O1 | 111.32 (12) |
O1—C1—H1B | 117 (3) | N1—C3—C4 | 112.11 (12) |
H1A—C1—H1B | 94 (4) | N1—C3—H3A | 108.9 (10) |
O1—C1—H1C | 109 (3) | C4—C3—H3A | 110.3 (9) |
H1A—C1—H1C | 108 (4) | N1—C3—H3B | 110.5 (10) |
H1B—C1—H1C | 119 (5) | C4—C3—H3B | 111.0 (10) |
O1—C1—H1A' | 115 (4) | H3A—C3—H3B | 103.7 (13) |
H1A—C1—H1A' | 49 (4) | C3—C4—C5 | 112.62 (12) |
H1B—C1—H1A' | 47 (4) | C3—C4—H4A | 109.1 (10) |
H1C—C1—H1A' | 134 (5) | C5—C4—H4A | 108.8 (10) |
O1—C1—H1B' | 111 (3) | C3—C4—H4B | 109.8 (10) |
H1A—C1—H1B' | 139 (4) | C5—C4—H4B | 110.0 (10) |
H1B—C1—H1B' | 57 (4) | H4A—C4—H4B | 106.3 (14) |
H1C—C1—H1B' | 70 (4) | C4—C5—C5i | 114.08 (15) |
H1A'—C1—H1B' | 102 (5) | C4—C5—H5A | 110.2 (10) |
O1—C1—H1C' | 108 (3) | C5i—C5—H5A | 108.6 (9) |
H1A—C1—H1C' | 61 (4) | C4—C5—H5B | 109.9 (10) |
H1B—C1—H1C' | 134 (5) | C5i—C5—H5B | 108.1 (10) |
H1C—C1—H1C' | 50 (4) | H5A—C5—H5B | 105.5 (14) |
| | | |
C3—N1—C2—O2 | 4.0 (2) | C2—N1—C3—C4 | −177.45 (14) |
C3—N1—C2—O1 | −176.56 (13) | N1—C3—C4—C5 | −176.07 (14) |
C1—O1—C2—O2 | 0.5 (2) | C3—C4—C5—C5i | 178.36 (17) |
C1—O1—C2—N1 | −178.97 (17) | | |
Symmetry code: (i) −x+1, −y, −z. |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1D···O2ii | 0.855 (19) | 2.116 (19) | 2.9664 (17) | 172.9 (17) |
Symmetry code: (ii) x−1, y, z. |