Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S0108270108021392/fa3145sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S0108270108021392/fa3145I_100Ksup2.hkl | |
Structure factor file (CIF format) https://doi.org/10.1107/S0108270108021392/fa3145I_300Ksup3.hkl |
CCDC references: 700038; 700039
To a solution of (II) (10.6 g, 0.040 mol) in 30 ml of DMF under nitrogen was added sodium hydride (50% in mineral oil, 1.92 g, 0.040 mol). The resulting red solution was stirred for 45 min, after which a solution of ethyl chloroacetate (4.9 g, 0.040 mol) in 10 ml of DMF was added dropwise over 10 min. The resulting solution was heated at 333 K overnight. The reaction mixture was poured into 100 ml of water, and extracted three times with ether. The combined ether layers were dried with magnesium sulfate, and the solvent removed under reduced pressure. The residual yellow oil was dissolved in acetonitrile, and the acetonitrile was washed twice with hexane. The acetonitrile was removed under reduced pressure to produce the title compound as a yellow oil, which crystallized upon standing (9.11 g, 65%). 1H-NMR (CDCl3, 300 MHz): δ 1.27 (t, 3H, J = 7.1 Hz, H112), 2.86 (s, 2H, H11), 3.30 (s, 2H, H3), 3.76 (s, 6H, OCH3's), 4.16 (q, 2H, J = 7.1 Hz, H111), 5.93 (s, 2H, H37), 6.52 (dd, 1H, J = 7.9 Hz and 2.7 Hz, H36), 6.56 (d, 1H, J = 2.7 Hz, H32) and 6.71 (d, 1H, J = 7.9 Hz, H35). 13 C-NMR (CDCl3, 75.5 MHz): δ 14.1 (C112), 36.8 (C3), 38.5 (C1), 52.8 (OCH3's), 56.8 (C2), 60.8 (C111), 101.0 (C37), 108.2 (C32 or C35), 110.2 (C32 or C35), 123.2 (C36), 129.0 (C31), 146.8 (C33 or C34), 147.6 (C33 or C34), 170.4 (C21 and C22) and 170.6 (C11).
All non-H atoms were refined with anisotropic displacement parameters in both structures. For T = 100 K, all H atoms were found in difference maps and freely refined. Refined C—H bond lengths range from 0.953 to 1.07 Å. All of the H atoms in the 300 K structure were visible in difference maps except for two of the methyl groups (C112, C211), for which only some of the H atoms were visible. All H-atom positions were calculated to give an idealized geometry about their parent atoms in the 300 K structure. Multiple difference map peaks around the methyl groups C112 and C211 implied disorder and H-atom positions were calculated to give twofold disorder. The torsion angle of the methyl group at C221 was refined to match the electron density. Calculated C—H bond lengths in the 300 K structure are assigned in the range 0.96–0.97 Å for methyl and methylene H atoms and 0.93 Å for aromatic H atoms.
Data collection: KappaCCD software for I_100K. Cell refinement: SCALEPACK (Otwinowski & Minor, 1997) for I_100K; HKL SCALEPACK (Otwinowski & Minor, 1997) for I_300K. Data reduction: DENZO and SCALEPACK (Otwinowski & Minor, 1997) for I_100K. Program(s) used to solve structure: maXus (Mackay et al., 1999) and SIR97 (Altomare et al., 1999)' for I_100K; 'maXus (Mackay et al., 1999)and SIR97 (Altomare et al., 1999)' for I_300K. For both compounds, program(s) used to refine structure: SHELXL97 (Sheldrick, 2008). Molecular graphics: ORTEP (Johnson, 1976) for I_100K. For both compounds, software used to prepare material for publication: PARST (Nardelli, 1995).
C17H20O8 | F(000) = 744 |
Mr = 352.33 | Dx = 1.399 Mg m−3 |
Monoclinic, P21/c | Melting point = 340–341 K |
Hall symbol: -P 2ybc | Mo Kα radiation, λ = 0.71073 Å |
a = 10.3799 (2) Å | Cell parameters from 5085 reflections |
b = 11.7642 (2) Å | θ = 1.0–30.0° |
c = 14.5275 (3) Å | µ = 0.11 mm−1 |
β = 109.4783 (8)° | T = 100 K |
V = 1672.49 (6) Å3 | Irregular, colourless |
Z = 4 | 0.30 × 0.30 × 0.25 mm |
Nonius KappaCCD diffractometer | 3573 reflections with I > 2σ(I) |
Radiation source: fine-focus sealed tube | Rint = 0.051 |
Graphite monochromator | θmax = 30.0°, θmin = 3.4° |
CCD scans | h = 0→14 |
4861 measured reflections | k = 0→16 |
4861 independent reflections | l = −20→19 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.042 | Hydrogen site location: difference Fourier map |
wR(F2) = 0.108 | All H-atom parameters refined |
S = 1.05 | w = 1/[σ2(Fo2) + (0.0733P)2 + 0.1393P] where P = (Fo2 + 2Fc2)/3 |
4861 reflections | (Δ/σ)max < 0.001 |
306 parameters | Δρmax = 0.29 e Å−3 |
0 restraints | Δρmin = −0.25 e Å−3 |
C17H20O8 | V = 1672.49 (6) Å3 |
Mr = 352.33 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 10.3799 (2) Å | µ = 0.11 mm−1 |
b = 11.7642 (2) Å | T = 100 K |
c = 14.5275 (3) Å | 0.30 × 0.30 × 0.25 mm |
β = 109.4783 (8)° |
Nonius KappaCCD diffractometer | 3573 reflections with I > 2σ(I) |
4861 measured reflections | Rint = 0.051 |
4861 independent reflections |
R[F2 > 2σ(F2)] = 0.042 | 0 restraints |
wR(F2) = 0.108 | All H-atom parameters refined |
S = 1.05 | Δρmax = 0.29 e Å−3 |
4861 reflections | Δρmin = −0.25 e Å−3 |
306 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
C1 | 0.37676 (12) | 0.53491 (11) | 0.20482 (9) | 0.0203 (2) | |
H1A | 0.4104 (14) | 0.4604 (13) | 0.2317 (10) | 0.024 (4)* | |
H1B | 0.3614 (14) | 0.5319 (12) | 0.1352 (11) | 0.024 (3)* | |
C2 | 0.24179 (11) | 0.56349 (10) | 0.22145 (8) | 0.0185 (2) | |
C3 | 0.25195 (13) | 0.55367 (11) | 0.33026 (9) | 0.0206 (2) | |
H3A | 0.3258 (14) | 0.6056 (12) | 0.3677 (10) | 0.021 (3)* | |
H3B | 0.1652 (14) | 0.5814 (12) | 0.3345 (10) | 0.022 (3)* | |
C31 | 0.28393 (12) | 0.43606 (10) | 0.37383 (8) | 0.0195 (2) | |
C32 | 0.42093 (12) | 0.40029 (11) | 0.41452 (8) | 0.0209 (2) | |
H32 | 0.4938 (14) | 0.4493 (12) | 0.4139 (10) | 0.025 (4)* | |
C33 | 0.44457 (11) | 0.29421 (11) | 0.45633 (8) | 0.0203 (2) | |
C34 | 0.33948 (12) | 0.22335 (10) | 0.45930 (9) | 0.0210 (2) | |
C35 | 0.20479 (13) | 0.25490 (11) | 0.41948 (10) | 0.0246 (3) | |
H35 | 0.1306 (15) | 0.2057 (13) | 0.4221 (11) | 0.031 (4)* | |
C36 | 0.17930 (12) | 0.36327 (11) | 0.37656 (9) | 0.0219 (2) | |
H36 | 0.0855 (15) | 0.3880 (12) | 0.3485 (10) | 0.024 (4)* | |
O33 | 0.56824 (8) | 0.24104 (8) | 0.49873 (7) | 0.0269 (2) | |
O34 | 0.39303 (9) | 0.12216 (8) | 0.50364 (7) | 0.0269 (2) | |
C37 | 0.53777 (13) | 0.14246 (11) | 0.54577 (10) | 0.0261 (3) | |
H37A | 0.5603 (14) | 0.1598 (13) | 0.6150 (11) | 0.026 (4)* | |
H37B | 0.5863 (15) | 0.0754 (13) | 0.5320 (10) | 0.028 (4)* | |
C11 | 0.48473 (12) | 0.62470 (11) | 0.24745 (9) | 0.0223 (2) | |
O111 | 0.61081 (9) | 0.58373 (8) | 0.26863 (7) | 0.0273 (2) | |
O112 | 0.46014 (10) | 0.72261 (8) | 0.25945 (8) | 0.0347 (2) | |
C111 | 0.71926 (13) | 0.66928 (13) | 0.30554 (11) | 0.0295 (3) | |
H11A | 0.7112 (16) | 0.7257 (14) | 0.2535 (12) | 0.038 (4)* | |
H11B | 0.7014 (16) | 0.7109 (14) | 0.3603 (12) | 0.034 (4)* | |
C112 | 0.85335 (17) | 0.61144 (17) | 0.33654 (18) | 0.0524 (5) | |
H12A | 0.934 (2) | 0.6701 (18) | 0.3583 (15) | 0.066 (6)* | |
H12B | 0.859 (2) | 0.568 (2) | 0.2796 (18) | 0.079 (7)* | |
H12C | 0.861 (3) | 0.555 (3) | 0.396 (2) | 0.114 (10)* | |
C21 | 0.19455 (12) | 0.68495 (10) | 0.18709 (9) | 0.0212 (2) | |
O211 | 0.19863 (9) | 0.70123 (7) | 0.09667 (6) | 0.0255 (2) | |
O212 | 0.15514 (9) | 0.75435 (8) | 0.23209 (7) | 0.0282 (2) | |
C211 | 0.17092 (16) | 0.81621 (13) | 0.06056 (12) | 0.0339 (3) | |
H21A | 0.1817 (18) | 0.8156 (15) | −0.0046 (14) | 0.050 (5)* | |
H21B | 0.2396 (17) | 0.8727 (15) | 0.1062 (12) | 0.041 (4)* | |
H21C | 0.0786 (18) | 0.8389 (14) | 0.0534 (12) | 0.041 (4)* | |
C22 | 0.13020 (12) | 0.48291 (10) | 0.15953 (8) | 0.0204 (2) | |
O221 | 0.00934 (8) | 0.51196 (8) | 0.16648 (6) | 0.0265 (2) | |
O222 | 0.14782 (9) | 0.40523 (8) | 0.11153 (7) | 0.0290 (2) | |
C221 | −0.10594 (14) | 0.44128 (14) | 0.11268 (11) | 0.0325 (3) | |
H22A | −0.186 (2) | 0.4784 (18) | 0.1212 (15) | 0.070 (6)* | |
H22B | −0.0990 (17) | 0.3649 (15) | 0.1375 (12) | 0.041 (4)* | |
H22C | −0.1164 (18) | 0.4436 (15) | 0.0442 (14) | 0.049 (5)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
C1 | 0.0207 (6) | 0.0209 (6) | 0.0203 (6) | 0.0003 (5) | 0.0081 (5) | −0.0025 (5) |
C2 | 0.0192 (5) | 0.0171 (5) | 0.0196 (5) | 0.0001 (4) | 0.0069 (4) | −0.0019 (4) |
C3 | 0.0216 (6) | 0.0211 (6) | 0.0198 (5) | −0.0005 (5) | 0.0077 (5) | −0.0035 (5) |
C31 | 0.0207 (6) | 0.0206 (6) | 0.0173 (5) | −0.0007 (4) | 0.0067 (4) | −0.0035 (4) |
C32 | 0.0189 (6) | 0.0235 (6) | 0.0195 (6) | −0.0042 (5) | 0.0055 (5) | −0.0032 (5) |
C33 | 0.0162 (5) | 0.0252 (6) | 0.0188 (5) | −0.0002 (4) | 0.0047 (4) | −0.0031 (5) |
C34 | 0.0229 (6) | 0.0202 (6) | 0.0209 (6) | 0.0013 (5) | 0.0085 (5) | −0.0001 (5) |
C35 | 0.0203 (6) | 0.0249 (6) | 0.0304 (6) | −0.0026 (5) | 0.0110 (5) | 0.0010 (5) |
C36 | 0.0182 (6) | 0.0252 (6) | 0.0233 (6) | 0.0010 (5) | 0.0080 (5) | −0.0003 (5) |
O33 | 0.0177 (4) | 0.0294 (5) | 0.0311 (5) | 0.0016 (4) | 0.0048 (4) | 0.0048 (4) |
O34 | 0.0229 (4) | 0.0231 (5) | 0.0338 (5) | 0.0016 (3) | 0.0085 (4) | 0.0046 (4) |
C37 | 0.0247 (6) | 0.0233 (7) | 0.0274 (7) | 0.0016 (5) | 0.0046 (5) | −0.0007 (5) |
C11 | 0.0207 (6) | 0.0265 (6) | 0.0211 (6) | −0.0008 (5) | 0.0089 (5) | −0.0010 (5) |
O111 | 0.0190 (4) | 0.0273 (5) | 0.0351 (5) | −0.0017 (3) | 0.0086 (4) | −0.0008 (4) |
O112 | 0.0268 (5) | 0.0264 (5) | 0.0507 (6) | −0.0040 (4) | 0.0125 (4) | −0.0121 (5) |
C111 | 0.0222 (6) | 0.0340 (7) | 0.0315 (7) | −0.0073 (5) | 0.0079 (5) | −0.0003 (6) |
C112 | 0.0262 (8) | 0.0437 (10) | 0.0803 (14) | −0.0019 (7) | 0.0083 (8) | −0.0111 (10) |
C21 | 0.0179 (6) | 0.0211 (6) | 0.0250 (6) | −0.0019 (5) | 0.0078 (5) | −0.0016 (5) |
O211 | 0.0320 (5) | 0.0212 (5) | 0.0257 (4) | 0.0036 (4) | 0.0128 (4) | 0.0045 (4) |
O212 | 0.0330 (5) | 0.0221 (5) | 0.0334 (5) | 0.0053 (4) | 0.0163 (4) | −0.0014 (4) |
C211 | 0.0373 (8) | 0.0271 (7) | 0.0433 (9) | 0.0097 (6) | 0.0216 (7) | 0.0139 (6) |
C22 | 0.0211 (6) | 0.0198 (6) | 0.0191 (5) | −0.0008 (4) | 0.0052 (5) | 0.0025 (5) |
O221 | 0.0180 (4) | 0.0281 (5) | 0.0309 (5) | −0.0027 (3) | 0.0047 (4) | −0.0037 (4) |
O222 | 0.0315 (5) | 0.0241 (5) | 0.0316 (5) | −0.0038 (4) | 0.0106 (4) | −0.0091 (4) |
C221 | 0.0218 (7) | 0.0362 (8) | 0.0336 (8) | −0.0086 (6) | 0.0016 (6) | 0.0007 (6) |
C1—C11 | 1.5141 (17) | C37—H37A | 0.975 (15) |
C1—C2 | 1.5361 (16) | C37—H37B | 0.992 (15) |
C1—H1A | 0.976 (15) | C11—O112 | 1.2050 (15) |
C1—H1B | 0.971 (14) | C11—O111 | 1.3309 (15) |
C2—C22 | 1.5345 (16) | O111—C111 | 1.4714 (16) |
C2—C21 | 1.5388 (17) | C111—C112 | 1.478 (2) |
C2—C3 | 1.5531 (16) | C111—H11A | 0.988 (17) |
C3—C31 | 1.5116 (17) | C111—H11B | 1.003 (16) |
C3—H3A | 0.989 (14) | C112—H12A | 1.05 (2) |
C3—H3B | 0.979 (14) | C112—H12B | 0.99 (2) |
C31—C36 | 1.3940 (17) | C112—H12C | 1.07 (3) |
C31—C32 | 1.4101 (17) | C21—O212 | 1.1999 (14) |
C32—C33 | 1.3737 (18) | C21—O211 | 1.3419 (14) |
C32—H32 | 0.953 (14) | O211—C211 | 1.4446 (16) |
C33—O33 | 1.3752 (14) | C211—H21A | 0.990 (19) |
C33—C34 | 1.3848 (17) | C211—H21B | 1.036 (17) |
C34—C35 | 1.3739 (17) | C211—H21C | 0.966 (17) |
C34—O34 | 1.3792 (15) | C22—O222 | 1.1999 (15) |
C35—C36 | 1.4050 (18) | C22—O221 | 1.3362 (14) |
C35—H35 | 0.974 (15) | O221—C221 | 1.4527 (16) |
C36—H36 | 0.967 (14) | C221—H22A | 0.98 (2) |
O33—C37 | 1.4339 (16) | C221—H22B | 0.961 (18) |
O34—C37 | 1.4407 (16) | C221—H22C | 0.964 (18) |
C11—C1—C2 | 111.87 (10) | O34—C37—H37A | 109.3 (8) |
C11—C1—H1A | 110.2 (8) | O33—C37—H37B | 109.9 (8) |
C2—C1—H1A | 111.0 (8) | O34—C37—H37B | 108.1 (9) |
C11—C1—H1B | 107.1 (8) | H37A—C37—H37B | 114.3 (12) |
C2—C1—H1B | 109.3 (8) | O112—C11—O111 | 123.52 (11) |
H1A—C1—H1B | 107.2 (11) | O112—C11—C1 | 124.23 (11) |
C22—C2—C1 | 108.80 (9) | O111—C11—C1 | 112.25 (10) |
C22—C2—C21 | 106.67 (9) | C11—O111—C111 | 114.23 (10) |
C1—C2—C21 | 111.16 (10) | O111—C111—C112 | 108.93 (13) |
C22—C2—C3 | 109.42 (9) | O111—C111—H11A | 108.7 (9) |
C1—C2—C3 | 112.81 (10) | C112—C111—H11A | 111.9 (9) |
C21—C2—C3 | 107.78 (9) | O111—C111—H11B | 107.6 (9) |
C31—C3—C2 | 115.16 (10) | C112—C111—H11B | 112.8 (9) |
C31—C3—H3A | 108.3 (8) | H11A—C111—H11B | 106.8 (13) |
C2—C3—H3A | 106.9 (8) | C111—C112—H12A | 111.5 (11) |
C31—C3—H3B | 110.9 (8) | C111—C112—H12B | 107.1 (14) |
C2—C3—H3B | 106.7 (8) | H12A—C112—H12B | 109.2 (17) |
H3A—C3—H3B | 108.7 (11) | C111—C112—H12C | 110.0 (15) |
C36—C31—C32 | 119.41 (11) | H12A—C112—H12C | 108.9 (18) |
C36—C31—C3 | 120.65 (11) | H12B—C112—H12C | 110 (2) |
C32—C31—C3 | 119.91 (11) | O212—C21—O211 | 124.33 (11) |
C33—C32—C31 | 117.58 (11) | O212—C21—C2 | 125.78 (11) |
C33—C32—H32 | 121.9 (9) | O211—C21—C2 | 109.84 (10) |
C31—C32—H32 | 120.5 (9) | C21—O211—C211 | 114.94 (10) |
C32—C33—O33 | 127.85 (11) | O211—C211—H21A | 105.5 (11) |
C32—C33—C34 | 122.29 (11) | O211—C211—H21B | 110.9 (9) |
O33—C33—C34 | 109.86 (11) | H21A—C211—H21B | 110.2 (14) |
C35—C34—O34 | 128.67 (11) | O211—C211—H21C | 111.6 (10) |
C35—C34—C33 | 121.72 (12) | H21A—C211—H21C | 108.8 (14) |
O34—C34—C33 | 109.58 (10) | H21B—C211—H21C | 109.7 (14) |
C34—C35—C36 | 116.52 (11) | O222—C22—O221 | 124.58 (11) |
C34—C35—H35 | 122.0 (9) | O222—C22—C2 | 125.43 (11) |
C36—C35—H35 | 121.4 (9) | O221—C22—C2 | 109.99 (10) |
C31—C36—C35 | 122.47 (11) | C22—O221—C221 | 116.02 (10) |
C31—C36—H36 | 119.2 (8) | O221—C221—H22A | 105.0 (12) |
C35—C36—H36 | 118.3 (8) | O221—C221—H22B | 112.8 (10) |
C33—O33—C37 | 105.07 (9) | H22A—C221—H22B | 109.2 (16) |
C34—O34—C37 | 104.84 (9) | O221—C221—H22C | 109.1 (11) |
O33—C37—O34 | 107.23 (10) | H22A—C221—H22C | 108.0 (16) |
O33—C37—H37A | 107.9 (9) | H22B—C221—H22C | 112.4 (15) |
C17H20O8 | F(000) = 744 |
Mr = 352.34 | Dx = 1.349 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 3333 reflections |
a = 10.4985 (2) Å | θ = 1.0–25.4° |
b = 11.8828 (2) Å | µ = 0.11 mm−1 |
c = 14.7540 (3) Å | T = 300 K |
β = 109.5329 (9)° | Irregular, colourless |
V = 1734.66 (6) Å3 | 0.30 × 0.30 × 0.25 mm |
Z = 4 |
Nonius KappaCCD diffractometer | Rint = 0.047 |
Radiation source: fine-focus sealed tube | θmax = 25.3°, θmin = 1.5° |
CCD scans | h = −12→12 |
6310 measured reflections | k = −14→14 |
3157 independent reflections | l = −17→17 |
1879 reflections with I > 2σ(I) |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.047 | H-atom parameters constrained |
wR(F2) = 0.144 | w = 1/[σ2(Fo2) + (0.0715P)2 + 0.1953P] where P = (Fo2 + 2Fc2)/3 |
S = 1.05 | (Δ/σ)max < 0.001 |
3157 reflections | Δρmax = 0.29 e Å−3 |
228 parameters | Δρmin = −0.18 e Å−3 |
0 restraints | Extinction correction: SHELXL, Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.024 (3) |
C17H20O8 | V = 1734.66 (6) Å3 |
Mr = 352.34 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 10.4985 (2) Å | µ = 0.11 mm−1 |
b = 11.8828 (2) Å | T = 300 K |
c = 14.7540 (3) Å | 0.30 × 0.30 × 0.25 mm |
β = 109.5329 (9)° |
Nonius KappaCCD diffractometer | 1879 reflections with I > 2σ(I) |
6310 measured reflections | Rint = 0.047 |
3157 independent reflections |
R[F2 > 2σ(F2)] = 0.047 | 0 restraints |
wR(F2) = 0.144 | H-atom parameters constrained |
S = 1.05 | Δρmax = 0.29 e Å−3 |
3157 reflections | Δρmin = −0.18 e Å−3 |
228 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
C1 | 0.3751 (2) | 0.53110 (18) | 0.20770 (15) | 0.0579 (6) | |
H1A | 0.4063 | 0.4582 | 0.2361 | 0.07* | |
H1B | 0.3599 | 0.5257 | 0.1393 | 0.07* | |
C2 | 0.2413 (2) | 0.55942 (17) | 0.22284 (14) | 0.0515 (5) | |
C3 | 0.2501 (2) | 0.54881 (19) | 0.32990 (15) | 0.0591 (6) | |
H3A | 0.3183 | 0.601 | 0.3677 | 0.071* | |
H3B | 0.1642 | 0.5721 | 0.335 | 0.071* | |
C31 | 0.2833 (2) | 0.43345 (18) | 0.37376 (14) | 0.0546 (6) | |
C32 | 0.4184 (2) | 0.3995 (2) | 0.41591 (15) | 0.0595 (6) | |
H32 | 0.4891 | 0.4466 | 0.4159 | 0.071* | |
C33 | 0.4428 (2) | 0.2955 (2) | 0.45678 (15) | 0.0573 (6) | |
C34 | 0.3409 (2) | 0.22425 (19) | 0.45871 (16) | 0.0601 (6) | |
C35 | 0.2086 (2) | 0.2537 (2) | 0.41820 (19) | 0.0713 (7) | |
H35 | 0.1392 | 0.2054 | 0.4189 | 0.086* | |
C36 | 0.1821 (2) | 0.3597 (2) | 0.37569 (17) | 0.0652 (6) | |
H36 | 0.0925 | 0.3819 | 0.3474 | 0.078* | |
O33 | 0.56622 (15) | 0.24473 (15) | 0.50155 (13) | 0.0787 (5) | |
O34 | 0.39486 (16) | 0.12507 (14) | 0.50430 (13) | 0.0786 (5) | |
C37 | 0.5368 (2) | 0.1444 (2) | 0.54286 (19) | 0.0748 (7) | |
H37A | 0.5647 | 0.1519 | 0.6122 | 0.09* | |
H37B | 0.5852 | 0.0815 | 0.5278 | 0.09* | |
C11 | 0.4836 (2) | 0.6176 (2) | 0.25127 (17) | 0.0644 (6) | |
O111 | 0.60554 (16) | 0.57736 (14) | 0.26771 (14) | 0.0862 (6) | |
O112 | 0.46276 (18) | 0.71285 (17) | 0.26786 (17) | 0.1014 (7) | |
C111 | 0.7161 (3) | 0.6577 (3) | 0.3058 (2) | 0.0994 (9) | |
H11A | 0.7107 | 0.715 | 0.2578 | 0.119* | |
H11B | 0.7074 | 0.6944 | 0.3621 | 0.119* | |
C112 | 0.8423 (4) | 0.6031 (3) | 0.3307 (4) | 0.1549 (17) | |
H12A | 0.9133 | 0.6573 | 0.3556 | 0.232* | 0.5 |
H12B | 0.8516 | 0.5679 | 0.2747 | 0.232* | 0.5 |
H12C | 0.8481 | 0.547 | 0.3787 | 0.232* | 0.5 |
H12D | 0.8287 | 0.5242 | 0.317 | 0.232* | 0.5 |
H12E | 0.8904 | 0.6136 | 0.398 | 0.232* | 0.5 |
H12F | 0.8939 | 0.6344 | 0.2939 | 0.232* | 0.5 |
C21 | 0.1957 (2) | 0.67913 (19) | 0.18941 (17) | 0.0601 (6) | |
O211 | 0.20030 (17) | 0.69597 (13) | 0.10097 (12) | 0.0721 (5) | |
O212 | 0.15593 (18) | 0.74784 (14) | 0.23263 (13) | 0.0827 (6) | |
C211 | 0.1710 (3) | 0.8084 (2) | 0.0634 (2) | 0.1000 (10) | |
H21A | 0.1775 | 0.8114 | 0.0001 | 0.15* | 0.5 |
H21B | 0.2347 | 0.8599 | 0.1048 | 0.15* | 0.5 |
H21C | 0.0811 | 0.8288 | 0.0604 | 0.15* | 0.5 |
H21D | 0.1514 | 0.8553 | 0.1101 | 0.15* | 0.5 |
H21E | 0.0942 | 0.8069 | 0.0054 | 0.15* | 0.5 |
H21F | 0.2478 | 0.8379 | 0.0498 | 0.15* | 0.5 |
C22 | 0.1321 (2) | 0.47983 (19) | 0.16182 (16) | 0.0571 (6) | |
O221 | 0.01192 (15) | 0.50771 (13) | 0.16555 (11) | 0.0732 (5) | |
O222 | 0.15100 (18) | 0.40274 (15) | 0.11606 (13) | 0.0845 (6) | |
C221 | −0.1020 (3) | 0.4376 (2) | 0.1122 (2) | 0.0921 (9) | |
H22A | −0.1838 | 0.4686 | 0.1173 | 0.138* | |
H22B | −0.0891 | 0.3628 | 0.1383 | 0.138* | |
H22C | −0.1083 | 0.4352 | 0.0458 | 0.138* |
U11 | U22 | U33 | U12 | U13 | U23 | |
C1 | 0.0613 (13) | 0.0559 (13) | 0.0594 (13) | 0.0012 (11) | 0.0240 (11) | −0.0091 (11) |
C2 | 0.0536 (12) | 0.0463 (12) | 0.0567 (13) | −0.0009 (10) | 0.0209 (10) | −0.0077 (10) |
C3 | 0.0609 (13) | 0.0612 (14) | 0.0577 (13) | −0.0028 (11) | 0.0229 (11) | −0.0120 (11) |
C31 | 0.0556 (13) | 0.0597 (14) | 0.0498 (12) | −0.0060 (11) | 0.0193 (10) | −0.0082 (10) |
C32 | 0.0536 (14) | 0.0673 (16) | 0.0559 (13) | −0.0152 (11) | 0.0162 (11) | −0.0086 (12) |
C33 | 0.0487 (13) | 0.0668 (16) | 0.0549 (13) | −0.0044 (11) | 0.0152 (11) | −0.0083 (12) |
C34 | 0.0593 (14) | 0.0567 (14) | 0.0668 (15) | −0.0021 (11) | 0.0247 (12) | −0.0015 (12) |
C35 | 0.0574 (15) | 0.0674 (17) | 0.0946 (18) | −0.0103 (12) | 0.0326 (13) | 0.0054 (14) |
C36 | 0.0499 (13) | 0.0732 (17) | 0.0754 (15) | −0.0010 (12) | 0.0247 (12) | 0.0001 (13) |
O33 | 0.0528 (10) | 0.0856 (13) | 0.0905 (12) | −0.0008 (9) | 0.0143 (9) | 0.0086 (10) |
O34 | 0.0677 (11) | 0.0676 (11) | 0.0998 (13) | 0.0008 (9) | 0.0270 (9) | 0.0103 (10) |
C37 | 0.0710 (17) | 0.0665 (17) | 0.0810 (17) | 0.0040 (13) | 0.0176 (14) | −0.0050 (14) |
C11 | 0.0593 (15) | 0.0673 (17) | 0.0722 (15) | −0.0009 (12) | 0.0294 (12) | −0.0075 (13) |
O111 | 0.0572 (11) | 0.0765 (12) | 0.1274 (16) | −0.0041 (9) | 0.0342 (10) | −0.0060 (11) |
O112 | 0.0754 (12) | 0.0759 (13) | 0.154 (2) | −0.0126 (10) | 0.0406 (13) | −0.0421 (13) |
C111 | 0.0597 (17) | 0.108 (2) | 0.130 (3) | −0.0179 (16) | 0.0300 (17) | −0.0066 (19) |
C112 | 0.080 (2) | 0.118 (3) | 0.244 (5) | −0.004 (2) | 0.024 (3) | −0.003 (3) |
C21 | 0.0582 (14) | 0.0550 (14) | 0.0715 (16) | −0.0027 (11) | 0.0275 (12) | −0.0090 (12) |
O211 | 0.0898 (12) | 0.0560 (10) | 0.0776 (11) | 0.0088 (8) | 0.0373 (9) | 0.0074 (8) |
O212 | 0.0991 (13) | 0.0602 (11) | 0.1021 (14) | 0.0164 (9) | 0.0513 (12) | −0.0076 (9) |
C211 | 0.121 (2) | 0.0699 (18) | 0.128 (2) | 0.0295 (16) | 0.067 (2) | 0.0349 (18) |
C22 | 0.0633 (15) | 0.0504 (14) | 0.0558 (13) | −0.0001 (11) | 0.0176 (11) | −0.0012 (11) |
O221 | 0.0524 (10) | 0.0760 (11) | 0.0862 (11) | −0.0073 (8) | 0.0163 (8) | −0.0127 (9) |
O222 | 0.0853 (12) | 0.0691 (12) | 0.0970 (13) | −0.0074 (9) | 0.0275 (10) | −0.0306 (10) |
C221 | 0.0673 (16) | 0.097 (2) | 0.098 (2) | −0.0237 (15) | 0.0090 (15) | −0.0050 (17) |
C1—C11 | 1.509 (3) | C11—O111 | 1.311 (3) |
C1—C2 | 1.532 (3) | O111—C111 | 1.462 (3) |
C1—H1A | 0.97 | C111—C112 | 1.409 (4) |
C1—H1B | 0.97 | C111—H11A | 0.97 |
C2—C22 | 1.526 (3) | C111—H11B | 0.97 |
C2—C21 | 1.529 (3) | C112—H12A | 0.96 |
C2—C3 | 1.556 (3) | C112—H12B | 0.96 |
C3—C31 | 1.506 (3) | C112—H12C | 0.96 |
C3—H3A | 0.97 | C112—H12D | 0.96 |
C3—H3B | 0.97 | C112—H12E | 0.96 |
C31—C36 | 1.385 (3) | C112—H12F | 0.96 |
C31—C32 | 1.404 (3) | C21—O212 | 1.194 (2) |
C32—C33 | 1.361 (3) | C21—O211 | 1.337 (3) |
C32—H32 | 0.93 | O211—C211 | 1.439 (3) |
C33—C34 | 1.372 (3) | C211—H21A | 0.96 |
C33—O33 | 1.381 (3) | C211—H21B | 0.96 |
C34—C35 | 1.362 (3) | C211—H21C | 0.96 |
C34—O34 | 1.381 (3) | C211—H21D | 0.96 |
C35—C36 | 1.392 (3) | C211—H21E | 0.96 |
C35—H35 | 0.93 | C211—H21F | 0.96 |
C36—H36 | 0.93 | C22—O222 | 1.193 (3) |
O33—C37 | 1.419 (3) | C22—O221 | 1.323 (3) |
O34—C37 | 1.425 (3) | O221—C221 | 1.454 (3) |
C37—H37A | 0.97 | C221—H22A | 0.96 |
C37—H37B | 0.97 | C221—H22B | 0.96 |
C11—O112 | 1.193 (3) | C221—H22C | 0.96 |
C11—C1—C2 | 112.73 (17) | O111—C11—C1 | 112.4 (2) |
C11—C1—H1A | 109 | C11—O111—C111 | 115.7 (2) |
C2—C1—H1A | 109 | C112—C111—O111 | 110.9 (3) |
C11—C1—H1B | 109 | C112—C111—H11A | 109.5 |
C2—C1—H1B | 109 | O111—C111—H11A | 109.5 |
H1A—C1—H1B | 107.8 | C112—C111—H11B | 109.5 |
C22—C2—C21 | 107.06 (17) | O111—C111—H11B | 109.5 |
C22—C2—C1 | 108.83 (17) | H11A—C111—H11B | 108.1 |
C21—C2—C1 | 111.19 (17) | C111—C112—H12A | 109.5 |
C22—C2—C3 | 109.05 (16) | C111—C112—H12B | 109.5 |
C21—C2—C3 | 107.97 (17) | H12A—C112—H12B | 109.5 |
C1—C2—C3 | 112.59 (17) | C111—C112—H12C | 109.5 |
C31—C3—C2 | 115.88 (17) | H12A—C112—H12C | 109.5 |
C31—C3—H3A | 108.3 | H12B—C112—H12C | 109.5 |
C2—C3—H3A | 108.3 | C111—C112—H12D | 109.5 |
C31—C3—H3B | 108.3 | C111—C112—H12E | 109.5 |
C2—C3—H3B | 108.3 | H12D—C112—H12E | 109.5 |
H3A—C3—H3B | 107.4 | C111—C112—H12F | 109.5 |
C36—C31—C32 | 118.5 (2) | H12D—C112—H12F | 109.5 |
C36—C31—C3 | 121.1 (2) | H12E—C112—H12F | 109.5 |
C32—C31—C3 | 120.40 (19) | O212—C21—O211 | 123.5 (2) |
C33—C32—C31 | 118.0 (2) | O212—C21—C2 | 126.3 (2) |
C33—C32—H32 | 121 | O211—C21—C2 | 110.13 (18) |
C31—C32—H32 | 121 | C21—O211—C211 | 116.19 (19) |
C32—C33—C34 | 122.5 (2) | O211—C211—H21A | 109.5 |
C32—C33—O33 | 128.0 (2) | O211—C211—H21B | 109.5 |
C34—C33—O33 | 109.5 (2) | H21A—C211—H21B | 109.5 |
C35—C34—C33 | 121.3 (2) | O211—C211—H21C | 109.5 |
C35—C34—O34 | 128.7 (2) | H21A—C211—H21C | 109.5 |
C33—C34—O34 | 110.0 (2) | H21B—C211—H21C | 109.5 |
C34—C35—C36 | 116.8 (2) | O211—C211—H21D | 109.5 |
C34—C35—H35 | 121.6 | O211—C211—H21E | 109.5 |
C36—C35—H35 | 121.6 | H21D—C211—H21E | 109.5 |
C31—C36—C35 | 122.8 (2) | O211—C211—H21F | 109.5 |
C31—C36—H36 | 118.6 | H21D—C211—H21F | 109.5 |
C35—C36—H36 | 118.6 | H21E—C211—H21F | 109.5 |
C33—O33—C37 | 105.58 (17) | O222—C22—O221 | 123.8 (2) |
C34—O34—C37 | 105.11 (17) | O222—C22—C2 | 125.1 (2) |
O33—C37—O34 | 108.22 (19) | O221—C22—C2 | 111.05 (19) |
O33—C37—H37A | 110.1 | C22—O221—C221 | 117.20 (19) |
O34—C37—H37A | 110.1 | O221—C221—H22A | 109.5 |
O33—C37—H37B | 110.1 | O221—C221—H22B | 109.5 |
O34—C37—H37B | 110.1 | H22A—C221—H22B | 109.5 |
H37A—C37—H37B | 108.4 | O221—C221—H22C | 109.5 |
O112—C11—O111 | 122.9 (2) | H22A—C221—H22C | 109.5 |
O112—C11—C1 | 124.7 (2) | H22B—C221—H22C | 109.5 |
Experimental details
(I_100K) | (I_300K) | |
Crystal data | ||
Chemical formula | C17H20O8 | C17H20O8 |
Mr | 352.33 | 352.34 |
Crystal system, space group | Monoclinic, P21/c | Monoclinic, P21/c |
Temperature (K) | 100 | 300 |
a, b, c (Å) | 10.3799 (2), 11.7642 (2), 14.5275 (3) | 10.4985 (2), 11.8828 (2), 14.7540 (3) |
β (°) | 109.4783 (8) | 109.5329 (9) |
V (Å3) | 1672.49 (6) | 1734.66 (6) |
Z | 4 | 4 |
Radiation type | Mo Kα | Mo Kα |
µ (mm−1) | 0.11 | 0.11 |
Crystal size (mm) | 0.30 × 0.30 × 0.25 | 0.30 × 0.30 × 0.25 |
Data collection | ||
Diffractometer | Nonius KappaCCD diffractometer | Nonius KappaCCD diffractometer |
Absorption correction | – | – |
No. of measured, independent and observed [I > 2σ(I)] reflections | 4861, 4861, 3573 | 6310, 3157, 1879 |
Rint | 0.051 | 0.047 |
(sin θ/λ)max (Å−1) | 0.703 | 0.602 |
Refinement | ||
R[F2 > 2σ(F2)], wR(F2), S | 0.042, 0.108, 1.05 | 0.047, 0.144, 1.05 |
No. of reflections | 4861 | 3157 |
No. of parameters | 306 | 228 |
H-atom treatment | All H-atom parameters refined | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.29, −0.25 | 0.29, −0.18 |
Computer programs: KappaCCD software, HKL SCALEPACK (Otwinowski & Minor, 1997), DENZO and SCALEPACK (Otwinowski & Minor, 1997), maXus (Mackay et al., 1999) and SIR97 (Altomare et al., 1999)', 'maXus (Mackay et al., 1999)and SIR97 (Altomare et al., 1999)', SHELXL97 (Sheldrick, 2008), ORTEP (Johnson, 1976), PARST (Nardelli, 1995).
C1—C2 | 1.5361 (16) | C33—C34 | 1.3848 (17) |
C2—C3 | 1.5531 (16) | C34—C35 | 1.3739 (17) |
C31—C36 | 1.3940 (17) | C34—O34 | 1.3792 (15) |
C31—C32 | 1.4101 (17) | C35—C36 | 1.4050 (18) |
C32—C33 | 1.3737 (18) | O33—C37 | 1.4339 (16) |
C33—O33 | 1.3752 (14) | O34—C37 | 1.4407 (16) |
The title compound, (I), was prepared in the course of preparation of analogs of 1,2-dihydronaphthalen-2-amine (Hathaway et al., 1982). Unlike similar triesters, which are oils, the title compound crystallized at room temperature. It was prepared from dimethyl (1,3-benzodioxol-5-ylmethyl)malonate, (II), by alkylation with ethyl chloroacetate. The starting compound (II) was prepared from piperonal as shown in the scheme.
While the following details, as well as the figures and table, are derived from the structure at 100 K, similar geometry is found for the room temperature structure except where otherwise noted.
The benzodioxole fused ring, two methoxycarbonyl groups, and an (ethoxycarbonyl)methyl group are arranged around the tetrahedral C2. Bond lengths and angles within the six-membered ring are consistent with its aromatic character, although significant bond length alternation is found. The C33—C34 bond length of 1.3848 (17) Å for the two ring C atoms that are also part of the five-membered ring is close in value to the average C—C bond length in the six-membered ring (1.390 Å). The two neighboring bonds (C32—C33, C34—C35) have the shortest lengths in the ring (Table 1), while the next two neighboring bonds (C31—C32, C35—C36) are the longest; and the opposite bond in the ring (C31—C36) is again close to the average.
The gross shape of the molecule is flattened with respect to the tetrahedron about C2 and, in the projection of Fig. 1, can be viewed as being formed by intersecting diester and monoester chains, both with an anti conformation, which cross at approximately a right angle [87.84 (4)° between their mean planes] and share C2. The diester chain, which extends from the ethoxy group (C112) to the methoxy group at C221, exhibits a significant twist, with the ethoxy-group plane forming an angle of 28.40 (6)° relative to the plane of the remaining atoms in this chain. The monoester chain runs from the fused-ring system to the methoxy group C211. The fused-ring system is almost coplanar with the mean plane of the molecule [dihedral 13.34 (3)°] and forms an angle of 76.72 (3)° with the plane of the monoester chain.
The extended structure consists of interdigitated bilayers of the title molecule parallel to the crystallographic bc plane (Fig. 2). The ethoxy chain and benzodioxole ring of each molecule are directed into the bilayer such that the ethoxy chain of one molecule lies between benzodioxole rings of two neighbors and vice versa. Shortest O—H contact distances between neighboring molecules are 2.48 Å [O112···H37Ai; (i) 1 - x, 1 - y, 1 - z], linking the carbonyl O atom of the ethoxy group to a methylene H atom of the benzodioxole group, and 2.52 Å [O34···H37Bii; (ii) 1 - x, -y, 1 - z] linking an O atom of the benzodioxole group to the other methylene H atom within the bilayer in the 300 K structure. These contacts decrease in length to 2.355 (15) Å and 2.406 (15) Å at 100 K. Since C37 is bound to two O atoms, it is not surprising that the H atoms attached to it would be activated.
One methoxy group (C211) is approximately parallel with and on the outer edges of the bilayer. The other methoxy group (C221) is approximately perpendicular to the bilayer and partially extends into the neighboring bilayer. The short C—H···O hydrogen bonds that link neighboring molecules within the layer and the enhanced dispersion forces arising from partial extension of ethoxy groups into neighboring layers likely provide the stabilization needed for the compound to crystallize from the oil.