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Supporting information
![]() | Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536807036458/at2351sup1.cif |
![]() | Structure factor file (CIF format) https://doi.org/10.1107/S1600536807036458/at2351Isup2.hkl |
CCDC reference: 657880
Key indicators
- Single-crystal X-ray study
- T = 203 K
- Mean
(C-C) = 0.003 Å
- R factor = 0.031
- wR factor = 0.081
- Data-to-parameter ratio = 26.2
checkCIF/PLATON results
No syntax errors found
Alert level C ABSTM02_ALERT_3_C The ratio of expected to reported Tmax/Tmin(RR) is > 1.10 Tmin and Tmax reported: 0.460 1.000 Tmin and Tmax expected: 0.204 0.609 RR = 1.376 Please check that your absorption correction is appropriate. PLAT026_ALERT_3_C Ratio Observed / Unique Reflections too Low .... 44 Perc. PLAT060_ALERT_3_C Ratio Tmax/Tmin (Exp-to-Rep) (too) Large ....... 1.36 PLAT062_ALERT_4_C Rescale T(min) & T(max) by ..................... 0.61 PLAT230_ALERT_2_C Hirshfeld Test Diff for C3 - C4 .. 5.14 su
Alert level G ABSTM02_ALERT_3_G When printed, the submitted absorption T values will be replaced by the scaled T values. Since the ratio of scaled T's is identical to the ratio of reported T values, the scaling does not imply a change to the absorption corrections used in the study. Ratio of Tmax expected/reported 0.609 Tmax scaled 0.609 Tmin scaled 0.280
0 ALERT level A = In general: serious problem 0 ALERT level B = Potentially serious problem 5 ALERT level C = Check and explain 1 ALERT level G = General alerts; check 0 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 1 ALERT type 2 Indicator that the structure model may be wrong or deficient 4 ALERT type 3 Indicator that the structure quality may be low 1 ALERT type 4 Improvement, methodology, query or suggestion 0 ALERT type 5 Informative message, check
For related structures, see: Chen & Yu (2006a,b); Zhen & Han (2005a,b); Diao & Yu (2006); Qiu et al. (2006a,b); For related literature, see: Varma et al. (1986); Misra et al. (1981); Desai et al. (2001); Singh & Dash (1988); Hodnett & Dunn (1970); Yathirajan et al. (2007).
A mixture of 2-bromo-5-methoxybenzohydrazide (0.735 g, 0.003 mol) and 4-chlorobenzaldehyde (0.42 g, 0.003 mol) in 15 ml of absolute ethyl alcohol containing 2 drops of 4 M sulfuric acid was refluxed for about 3 h. On cooling, the solid separated was filtered and recrystallized from ethyl acetate (m.p.: 445–447 K). Analysis found: C 48.92, H 3.21, N 7.54%; C15H12BrClN2O2 requires: C 49.01, H 3.29, N 7.62%.
All H atoms were refined using a riding model with N—H = 0.87 Å and C—H = 0.94–0.97 Å, and with Uiso(H) = 1.18–1.49Ueq(C,N).
Schiff bases are used as substrates in the preparation of number of industrial and biologically active compounds via ring closure, cycloaddition and replacement reactions. Some Schiff base derivatives were reported to possess antimicrobial, anti-inflammatory and central nervous system activities. Moreover, Schiff bases are also known to have biological activities such as antimicrobial, antifungal, antitumor, and as herbicides. A new Schiff base, C15H12BrClN2O2 was synthesized and its crystal structure is reported.
The mean planes of 4-chlorophenyl and methylene hydrazide groups are coplanar [N2–C8–C9–C10 dihedral angle = -3.0 (3)°] and twisted from that of the 2-bromo, 5-methoxybenzo group by 52.3 (2)°.
Intermolecular N—H···O hydrogen bonding interactions involving a hydrizide hydrogen (N1–H1A) and the methylene oxygen (O1) link the molecules into inverted parallel ribbons along the b axis of the unit cell.
For related structures, see: Chen & Yu (2006a,b); Zhen & Han (2005a,b); Diao & Yu (2006); Qiu et al. (2006a,b); For related literature, see: Varma et al. (1986); Misra et al. (1981); Desai et al. (2001); Singh & Dash (1988); Hodnett & Dunn (1970); Yathirajan et al. (2007).
Data collection: CrysAlis PRO (Oxford Diffraction, 2007); cell refinement: CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: ORTEP-3 (Farrugia, 1997); software used to prepare material for publication: WinGX (Farrugia, 1999).
C15H12BrClN2O2 | F(000) = 736 |
Mr = 367.63 | Dx = 1.625 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 4592 reflections |
a = 7.2921 (3) Å | θ = 4.7–32.5° |
b = 21.7635 (9) Å | µ = 2.92 mm−1 |
c = 9.5067 (4) Å | T = 203 K |
β = 95.268 (4)° | Plate, yellow |
V = 1502.36 (11) Å3 | 0.57 × 0.49 × 0.17 mm |
Z = 4 |
Oxford Diffraction Gemini R diffractometer | 4997 independent reflections |
Radiation source: fine-focus sealed tube | 2202 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.056 |
Detector resolution: 10.5081 pixels mm-1 | θmax = 32.6°, θmin = 4.7° |
φ and ω scans | h = −10→10 |
Absorption correction: multi-scan (CrysAlis RED; Oxford Diffraction, 2007) | k = −32→32 |
Tmin = 0.460, Tmax = 1.000 | l = −14→13 |
17240 measured reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.031 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.081 | H-atom parameters constrained |
S = 0.95 | w = 1/[σ2(Fo2) + (0.0305P)2] where P = (Fo2 + 2Fc2)/3 |
4997 reflections | (Δ/σ)max = 0.001 |
191 parameters | Δρmax = 0.85 e Å−3 |
0 restraints | Δρmin = −0.46 e Å−3 |
C15H12BrClN2O2 | V = 1502.36 (11) Å3 |
Mr = 367.63 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 7.2921 (3) Å | µ = 2.92 mm−1 |
b = 21.7635 (9) Å | T = 203 K |
c = 9.5067 (4) Å | 0.57 × 0.49 × 0.17 mm |
β = 95.268 (4)° |
Oxford Diffraction Gemini R diffractometer | 4997 independent reflections |
Absorption correction: multi-scan (CrysAlis RED; Oxford Diffraction, 2007) | 2202 reflections with I > 2σ(I) |
Tmin = 0.460, Tmax = 1.000 | Rint = 0.056 |
17240 measured reflections |
R[F2 > 2σ(F2)] = 0.031 | 0 restraints |
wR(F2) = 0.081 | H-atom parameters constrained |
S = 0.95 | Δρmax = 0.85 e Å−3 |
4997 reflections | Δρmin = −0.46 e Å−3 |
191 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Br | 0.69194 (3) | 0.101993 (12) | 0.41614 (3) | 0.03808 (10) | |
Cl | 0.90438 (10) | 0.62116 (3) | 0.30120 (8) | 0.0506 (2) | |
O1 | 0.5198 (2) | 0.22677 (7) | 0.28481 (17) | 0.0340 (4) | |
O2 | 0.0069 (2) | 0.16145 (8) | 0.6990 (2) | 0.0420 (5) | |
N1 | 0.5265 (2) | 0.28449 (9) | 0.4846 (2) | 0.0266 (5) | |
H1A | 0.5063 | 0.2856 | 0.5733 | 0.032* | |
N2 | 0.5964 (2) | 0.33582 (9) | 0.4208 (2) | 0.0270 (5) | |
C1 | 0.4697 (3) | 0.12299 (11) | 0.4942 (2) | 0.0264 (5) | |
C2 | 0.3792 (3) | 0.07815 (12) | 0.5642 (3) | 0.0311 (6) | |
H2A | 0.4255 | 0.0378 | 0.5683 | 0.037* | |
C3 | 0.2230 (3) | 0.09179 (12) | 0.6277 (3) | 0.0362 (6) | |
H3A | 0.1595 | 0.0605 | 0.6712 | 0.043* | |
C4 | 0.1583 (3) | 0.15199 (12) | 0.6275 (3) | 0.0293 (6) | |
C41 | −0.0660 (4) | 0.22188 (13) | 0.7003 (3) | 0.0549 (9) | |
H41A | −0.1768 | 0.2219 | 0.7495 | 0.082* | |
H41B | −0.0954 | 0.2359 | 0.6040 | 0.082* | |
H41C | 0.0244 | 0.2492 | 0.7483 | 0.082* | |
C5 | 0.2471 (3) | 0.19706 (11) | 0.5575 (2) | 0.0261 (5) | |
H5A | 0.2019 | 0.2375 | 0.5557 | 0.031* | |
C6 | 0.4031 (3) | 0.18314 (10) | 0.4896 (2) | 0.0229 (5) | |
C7 | 0.4899 (3) | 0.23276 (11) | 0.4082 (2) | 0.0242 (5) | |
C8 | 0.6299 (3) | 0.38136 (11) | 0.5042 (3) | 0.0258 (5) | |
H8A | 0.6084 | 0.3776 | 0.5998 | 0.031* | |
C9 | 0.7011 (3) | 0.43919 (11) | 0.4533 (2) | 0.0257 (6) | |
C10 | 0.7435 (3) | 0.44632 (11) | 0.3144 (3) | 0.0284 (6) | |
H10A | 0.7305 | 0.4128 | 0.2520 | 0.034* | |
C11 | 0.8042 (3) | 0.50197 (12) | 0.2673 (3) | 0.0325 (6) | |
H11A | 0.8315 | 0.5066 | 0.1732 | 0.039* | |
C12 | 0.8246 (3) | 0.55101 (11) | 0.3607 (3) | 0.0298 (6) | |
C13 | 0.7867 (3) | 0.54521 (11) | 0.4987 (3) | 0.0330 (6) | |
H13A | 0.8026 | 0.5787 | 0.5611 | 0.040* | |
C14 | 0.7248 (3) | 0.48933 (11) | 0.5444 (3) | 0.0305 (6) | |
H14A | 0.6982 | 0.4850 | 0.6388 | 0.037* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Br | 0.04184 (16) | 0.03696 (17) | 0.03731 (17) | 0.00850 (13) | 0.01377 (11) | 0.00091 (13) |
Cl | 0.0590 (4) | 0.0315 (4) | 0.0599 (5) | −0.0118 (3) | −0.0027 (4) | 0.0166 (3) |
O1 | 0.0519 (10) | 0.0302 (10) | 0.0215 (10) | −0.0067 (8) | 0.0111 (8) | −0.0010 (8) |
O2 | 0.0403 (10) | 0.0351 (11) | 0.0545 (13) | −0.0035 (9) | 0.0257 (9) | 0.0033 (9) |
N1 | 0.0364 (11) | 0.0238 (11) | 0.0211 (11) | −0.0064 (9) | 0.0106 (8) | 0.0014 (8) |
N2 | 0.0310 (10) | 0.0223 (12) | 0.0283 (12) | −0.0035 (10) | 0.0068 (8) | 0.0015 (9) |
C1 | 0.0317 (12) | 0.0258 (14) | 0.0223 (14) | 0.0005 (11) | 0.0062 (10) | −0.0010 (10) |
C2 | 0.0422 (14) | 0.0227 (14) | 0.0279 (15) | 0.0023 (12) | −0.0001 (11) | 0.0013 (11) |
C3 | 0.0425 (14) | 0.0349 (17) | 0.0321 (16) | −0.0101 (13) | 0.0075 (12) | 0.0051 (12) |
C4 | 0.0282 (12) | 0.0303 (15) | 0.0306 (15) | −0.0027 (12) | 0.0099 (10) | 0.0002 (11) |
C41 | 0.0457 (16) | 0.046 (2) | 0.079 (3) | 0.0093 (15) | 0.0390 (16) | 0.0093 (16) |
C5 | 0.0297 (12) | 0.0221 (13) | 0.0266 (14) | −0.0019 (11) | 0.0038 (10) | 0.0008 (10) |
C6 | 0.0269 (12) | 0.0214 (13) | 0.0204 (13) | −0.0057 (10) | 0.0031 (9) | 0.0005 (9) |
C7 | 0.0259 (12) | 0.0261 (14) | 0.0207 (14) | 0.0004 (10) | 0.0034 (10) | −0.0003 (10) |
C8 | 0.0311 (12) | 0.0256 (14) | 0.0210 (13) | −0.0003 (11) | 0.0041 (10) | 0.0017 (10) |
C9 | 0.0229 (12) | 0.0264 (14) | 0.0278 (15) | −0.0002 (10) | 0.0032 (10) | 0.0007 (10) |
C10 | 0.0291 (12) | 0.0224 (14) | 0.0340 (16) | −0.0010 (11) | 0.0036 (11) | −0.0024 (11) |
C11 | 0.0332 (14) | 0.0343 (16) | 0.0301 (15) | −0.0005 (12) | 0.0036 (11) | 0.0059 (12) |
C12 | 0.0288 (12) | 0.0216 (14) | 0.0380 (17) | −0.0013 (11) | −0.0026 (11) | 0.0077 (11) |
C13 | 0.0350 (13) | 0.0254 (15) | 0.0378 (17) | −0.0001 (12) | −0.0009 (11) | −0.0053 (12) |
C14 | 0.0364 (13) | 0.0254 (14) | 0.0306 (15) | −0.0009 (12) | 0.0071 (11) | −0.0033 (11) |
Br—C1 | 1.899 (2) | C41—H41B | 0.9700 |
Cl—C12 | 1.746 (2) | C41—H41C | 0.9700 |
O1—C7 | 1.220 (2) | C5—C6 | 1.392 (3) |
O2—C4 | 1.365 (3) | C5—H5A | 0.9400 |
O2—C41 | 1.419 (3) | C6—C7 | 1.502 (3) |
N1—C7 | 1.353 (3) | C8—C9 | 1.461 (3) |
N1—N2 | 1.390 (2) | C8—H8A | 0.9400 |
N1—H1A | 0.8700 | C9—C10 | 1.392 (3) |
N2—C8 | 1.279 (3) | C9—C14 | 1.394 (3) |
C1—C2 | 1.383 (3) | C10—C11 | 1.379 (3) |
C1—C6 | 1.396 (3) | C10—H10A | 0.9400 |
C2—C3 | 1.369 (3) | C11—C12 | 1.388 (3) |
C2—H2A | 0.9400 | C11—H11A | 0.9400 |
C3—C4 | 1.392 (3) | C12—C13 | 1.370 (3) |
C3—H3A | 0.9400 | C13—C14 | 1.381 (3) |
C4—C5 | 1.380 (3) | C13—H13A | 0.9400 |
C41—H41A | 0.9700 | C14—H14A | 0.9400 |
C4—O2—C41 | 117.70 (19) | C5—C6—C7 | 118.9 (2) |
C7—N1—N2 | 119.81 (19) | C1—C6—C7 | 121.92 (19) |
C7—N1—H1A | 120.1 | O1—C7—N1 | 124.1 (2) |
N2—N1—H1A | 120.1 | O1—C7—C6 | 122.7 (2) |
C8—N2—N1 | 114.2 (2) | N1—C7—C6 | 113.18 (19) |
C2—C1—C6 | 119.8 (2) | N2—C8—C9 | 121.1 (2) |
C2—C1—Br | 118.72 (19) | N2—C8—H8A | 119.5 |
C6—C1—Br | 121.37 (17) | C9—C8—H8A | 119.5 |
C3—C2—C1 | 120.8 (2) | C10—C9—C14 | 118.5 (2) |
C3—C2—H2A | 119.6 | C10—C9—C8 | 121.8 (2) |
C1—C2—H2A | 119.6 | C14—C9—C8 | 119.7 (2) |
C2—C3—C4 | 119.9 (2) | C11—C10—C9 | 120.8 (2) |
C2—C3—H3A | 120.0 | C11—C10—H10A | 119.6 |
C4—C3—H3A | 120.0 | C9—C10—H10A | 119.6 |
O2—C4—C5 | 124.8 (2) | C10—C11—C12 | 119.1 (2) |
O2—C4—C3 | 115.5 (2) | C10—C11—H11A | 120.4 |
C5—C4—C3 | 119.7 (2) | C12—C11—H11A | 120.4 |
O2—C41—H41A | 109.5 | C13—C12—C11 | 121.5 (2) |
O2—C41—H41B | 109.5 | C13—C12—Cl | 119.54 (19) |
H41A—C41—H41B | 109.5 | C11—C12—Cl | 119.0 (2) |
O2—C41—H41C | 109.5 | C12—C13—C14 | 118.9 (2) |
H41A—C41—H41C | 109.5 | C12—C13—H13A | 120.6 |
H41B—C41—H41C | 109.5 | C14—C13—H13A | 120.6 |
C4—C5—C6 | 120.6 (2) | C13—C14—C9 | 121.3 (2) |
C4—C5—H5A | 119.7 | C13—C14—H14A | 119.4 |
C6—C5—H5A | 119.7 | C9—C14—H14A | 119.4 |
C5—C6—C1 | 119.1 (2) | ||
C7—N1—N2—C8 | −178.3 (2) | C5—C6—C7—O1 | −126.1 (2) |
C6—C1—C2—C3 | 1.0 (4) | C1—C6—C7—O1 | 51.1 (3) |
Br—C1—C2—C3 | 177.07 (19) | C5—C6—C7—N1 | 52.4 (3) |
C1—C2—C3—C4 | −2.9 (4) | C1—C6—C7—N1 | −130.3 (2) |
C41—O2—C4—C5 | 0.7 (4) | N1—N2—C8—C9 | −178.99 (18) |
C41—O2—C4—C3 | −179.1 (2) | N2—C8—C9—C10 | −3.0 (3) |
C2—C3—C4—O2 | −177.1 (2) | N2—C8—C9—C14 | 175.8 (2) |
C2—C3—C4—C5 | 3.1 (4) | C14—C9—C10—C11 | −1.2 (3) |
O2—C4—C5—C6 | 178.8 (2) | C8—C9—C10—C11 | 177.6 (2) |
C3—C4—C5—C6 | −1.4 (4) | C9—C10—C11—C12 | 0.6 (3) |
C4—C5—C6—C1 | −0.5 (4) | C10—C11—C12—C13 | 0.4 (4) |
C4—C5—C6—C7 | 176.8 (2) | C10—C11—C12—Cl | 179.21 (17) |
C2—C1—C6—C5 | 0.8 (3) | C11—C12—C13—C14 | −0.8 (3) |
Br—C1—C6—C5 | −175.25 (18) | Cl—C12—C13—C14 | −179.60 (18) |
C2—C1—C6—C7 | −176.5 (2) | C12—C13—C14—C9 | 0.2 (4) |
Br—C1—C6—C7 | 7.5 (3) | C10—C9—C14—C13 | 0.8 (3) |
N2—N1—C7—O1 | 2.5 (3) | C8—C9—C14—C13 | −178.1 (2) |
N2—N1—C7—C6 | −176.03 (17) |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1A···O1i | 0.87 | 2.02 | 2.870 (2) | 165 |
Symmetry code: (i) x, −y+1/2, z+1/2. |
Experimental details
Crystal data | |
Chemical formula | C15H12BrClN2O2 |
Mr | 367.63 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 203 |
a, b, c (Å) | 7.2921 (3), 21.7635 (9), 9.5067 (4) |
β (°) | 95.268 (4) |
V (Å3) | 1502.36 (11) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 2.92 |
Crystal size (mm) | 0.57 × 0.49 × 0.17 |
Data collection | |
Diffractometer | Oxford Diffraction Gemini R |
Absorption correction | Multi-scan (CrysAlis RED; Oxford Diffraction, 2007) |
Tmin, Tmax | 0.460, 1.000 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 17240, 4997, 2202 |
Rint | 0.056 |
(sin θ/λ)max (Å−1) | 0.758 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.031, 0.081, 0.95 |
No. of reflections | 4997 |
No. of parameters | 191 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.85, −0.46 |
Computer programs: CrysAlis PRO (Oxford Diffraction, 2007), CrysAlis PRO, SHELXS97 (Sheldrick, 1997), SHELXL97 (Sheldrick, 1997), ORTEP-3 (Farrugia, 1997), WinGX (Farrugia, 1999).
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1A···O1i | 0.87 | 2.02 | 2.870 (2) | 164.5 |
Symmetry code: (i) x, −y+1/2, z+1/2. |
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Schiff bases are used as substrates in the preparation of number of industrial and biologically active compounds via ring closure, cycloaddition and replacement reactions. Some Schiff base derivatives were reported to possess antimicrobial, anti-inflammatory and central nervous system activities. Moreover, Schiff bases are also known to have biological activities such as antimicrobial, antifungal, antitumor, and as herbicides. A new Schiff base, C15H12BrClN2O2 was synthesized and its crystal structure is reported.
The mean planes of 4-chlorophenyl and methylene hydrazide groups are coplanar [N2–C8–C9–C10 dihedral angle = -3.0 (3)°] and twisted from that of the 2-bromo, 5-methoxybenzo group by 52.3 (2)°.
Intermolecular N—H···O hydrogen bonding interactions involving a hydrizide hydrogen (N1–H1A) and the methylene oxygen (O1) link the molecules into inverted parallel ribbons along the b axis of the unit cell.