Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536805040535/bd6019sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S1600536805040535/bd6019Isup2.hkl |
CCDC reference: 296518
Key indicators
- Single-crystal X-ray study
- T = 294 K
- Mean (C-C)= 0.005 Å
- R factor = 0.034
- wR factor = 0.078
- Data-to-parameter ratio = 16.0
checkCIF/PLATON results
No syntax errors found No errors found in this datablock
The title compound was prepared according to the procedure of Duan, Han et al. (2005) or Duan, Huang et al. (2005). A solution of potassium hydroxide (7.0 g) in dimethylformamide (50 ml) was stirred at room temperature for 20 min. 3,6-Dibromo-carbazole (6.5 g, 20 mmol), prepared according to Smith et al. (1992), was added and the mixture stirred for a further 40 min. A solution of 3-(chloromethyl)pyridine (3.825 g, 30 mmol) in dimethylformamide (50 ml) was added dropwise with stirring. The resulting mixture was then stirred at room temperature for 10 h and poured into water (500 ml), yielding a white precipitate. The solid product (I) was collected by filtration, washed with cold water and recrystallized from EtOH (yield: 7.11 g (85.5%); m.p. 488 K). Compound (I) (40 mg) was dissolved in a mixture of chloroform (5 ml) and ethanol (5 ml) and the solution was kept at room temperature for 18 d. Slow evaporation of the solution yielded colourless crystals suitable for X-ray analysis.
All H atoms were placed in calculated positions and refined using a riding model, with C—H = 0.93 (aromatic) and 0.97 (methylene) Å, and with Uiso(H) = 1.2Ueq(C).
Data collection: SMART (Bruker, 1997); cell refinement: SAINT (Bruker, 1997); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: SHELXTL (Bruker, 1997); software used to prepare material for publication: SHELXTL.
Fig. 1. Displacement ellipsoid (30%) plot of (I). | |
Fig. 2. Packing diagram of (I), viewed along [001]. Dashed lines indicate C—H···Br interactions. |
C18H12Br2N2 | F(000) = 816 |
Mr = 416.12 | Dx = 1.769 Mg m−3 |
Monoclinic, P21/c | Melting point: 488 K |
Hall symbol: -p 2ybc | Mo Kα radiation, λ = 0.71073 Å |
a = 10.469 (3) Å | Cell parameters from 2796 reflections |
b = 16.405 (5) Å | θ = 2.5–26.4° |
c = 9.866 (3) Å | µ = 5.19 mm−1 |
β = 112.761 (4)° | T = 294 K |
V = 1562.6 (8) Å3 | Rod, colourless |
Z = 4 | 0.26 × 0.22 × 0.14 mm |
Bruker SMART CCD area-detector diffractometer | 3194 independent reflections |
Radiation source: fine-focus sealed tube | 2238 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.046 |
ϕ and ω scans | θmax = 26.5°, θmin = 2.1° |
Absorption correction: multi-scan (SADABS; Bruker, 1997) | h = −12→13 |
Tmin = 0.258, Tmax = 0.484 | k = −16→20 |
8670 measured reflections | l = −10→12 |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.034 | H-atom parameters constrained |
wR(F2) = 0.078 | w = 1/[σ2(Fo2) + (0.0276P)2 + 0.8633P] where P = (Fo2 + 2Fc2)/3 |
S = 1.00 | (Δ/σ)max = 0.001 |
3194 reflections | Δρmax = 0.48 e Å−3 |
200 parameters | Δρmin = −0.52 e Å−3 |
0 restraints | Extinction correction: SHELXL97, Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.0233 (8) |
C18H12Br2N2 | V = 1562.6 (8) Å3 |
Mr = 416.12 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 10.469 (3) Å | µ = 5.19 mm−1 |
b = 16.405 (5) Å | T = 294 K |
c = 9.866 (3) Å | 0.26 × 0.22 × 0.14 mm |
β = 112.761 (4)° |
Bruker SMART CCD area-detector diffractometer | 3194 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 1997) | 2238 reflections with I > 2σ(I) |
Tmin = 0.258, Tmax = 0.484 | Rint = 0.046 |
8670 measured reflections |
R[F2 > 2σ(F2)] = 0.034 | 0 restraints |
wR(F2) = 0.078 | H-atom parameters constrained |
S = 1.00 | Δρmax = 0.48 e Å−3 |
3194 reflections | Δρmin = −0.52 e Å−3 |
200 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Br1 | −0.00354 (4) | 0.11991 (3) | 0.40210 (4) | 0.06161 (17) | |
Br2 | 0.80862 (4) | −0.09086 (2) | 0.85957 (5) | 0.06183 (17) | |
N1 | 0.4620 (2) | 0.16487 (15) | 0.9894 (3) | 0.0355 (6) | |
N2 | 0.6579 (3) | 0.39737 (19) | 1.0202 (4) | 0.0605 (9) | |
C1 | 0.3459 (3) | 0.16398 (18) | 0.8594 (3) | 0.0314 (7) | |
C2 | 0.2245 (3) | 0.20913 (19) | 0.8188 (4) | 0.0409 (8) | |
H2 | 0.2124 | 0.2477 | 0.8819 | 0.049* | |
C3 | 0.1226 (3) | 0.1950 (2) | 0.6824 (4) | 0.0426 (8) | |
H3 | 0.0401 | 0.2241 | 0.6525 | 0.051* | |
C4 | 0.1423 (3) | 0.1373 (2) | 0.5888 (3) | 0.0383 (8) | |
C5 | 0.2617 (3) | 0.09198 (19) | 0.6256 (3) | 0.0353 (7) | |
H5 | 0.2729 | 0.0539 | 0.5613 | 0.042* | |
C6 | 0.3652 (3) | 0.10598 (17) | 0.7640 (3) | 0.0307 (7) | |
C7 | 0.5001 (3) | 0.07045 (17) | 0.8407 (3) | 0.0305 (7) | |
C8 | 0.5739 (3) | 0.01016 (18) | 0.8028 (3) | 0.0352 (7) | |
H8 | 0.5382 | −0.0156 | 0.7117 | 0.042* | |
C9 | 0.7025 (3) | −0.00941 (19) | 0.9068 (4) | 0.0393 (8) | |
C10 | 0.7577 (3) | 0.0265 (2) | 1.0449 (4) | 0.0438 (8) | |
H10 | 0.8439 | 0.0101 | 1.1123 | 0.053* | |
C11 | 0.6855 (3) | 0.0861 (2) | 1.0820 (4) | 0.0428 (8) | |
H11 | 0.7221 | 0.1112 | 1.1736 | 0.051* | |
C12 | 0.5557 (3) | 0.10815 (18) | 0.9788 (3) | 0.0332 (7) | |
C13 | 0.4866 (3) | 0.2169 (2) | 1.1169 (3) | 0.0415 (8) | |
H13A | 0.5190 | 0.1837 | 1.2051 | 0.050* | |
H13B | 0.4001 | 0.2422 | 1.1085 | 0.050* | |
C14 | 0.5693 (4) | 0.3393 (2) | 1.0215 (4) | 0.0482 (9) | |
H14 | 0.4848 | 0.3370 | 0.9416 | 0.058* | |
C15 | 0.5922 (3) | 0.28248 (19) | 1.1308 (3) | 0.0356 (7) | |
C16 | 0.7160 (3) | 0.2878 (2) | 1.2504 (4) | 0.0480 (9) | |
H16 | 0.7358 | 0.2516 | 1.3284 | 0.058* | |
C17 | 0.8103 (4) | 0.3470 (2) | 1.2535 (4) | 0.0573 (10) | |
H17 | 0.8943 | 0.3516 | 1.3335 | 0.069* | |
C18 | 0.7776 (4) | 0.3992 (2) | 1.1358 (5) | 0.0590 (10) | |
H18 | 0.8429 | 0.4379 | 1.1371 | 0.071* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Br1 | 0.0346 (2) | 0.0907 (3) | 0.0459 (2) | 0.00194 (19) | 0.00059 (15) | −0.0041 (2) |
Br2 | 0.0535 (3) | 0.0609 (3) | 0.0743 (3) | 0.02057 (19) | 0.0283 (2) | −0.0020 (2) |
N1 | 0.0361 (14) | 0.0378 (15) | 0.0310 (14) | 0.0023 (12) | 0.0112 (11) | −0.0048 (11) |
N2 | 0.065 (2) | 0.060 (2) | 0.058 (2) | −0.0096 (17) | 0.0262 (18) | 0.0038 (16) |
C1 | 0.0302 (15) | 0.0313 (16) | 0.0338 (16) | −0.0012 (13) | 0.0137 (13) | −0.0008 (13) |
C2 | 0.0435 (19) | 0.0385 (19) | 0.044 (2) | 0.0040 (15) | 0.0206 (16) | −0.0037 (15) |
C3 | 0.0310 (17) | 0.047 (2) | 0.048 (2) | 0.0062 (15) | 0.0128 (15) | 0.0071 (16) |
C4 | 0.0305 (16) | 0.046 (2) | 0.0331 (17) | −0.0059 (15) | 0.0063 (13) | 0.0015 (14) |
C5 | 0.0330 (16) | 0.0377 (17) | 0.0343 (17) | −0.0020 (14) | 0.0120 (13) | −0.0023 (13) |
C6 | 0.0292 (15) | 0.0318 (17) | 0.0322 (16) | −0.0006 (12) | 0.0129 (13) | 0.0024 (13) |
C7 | 0.0291 (15) | 0.0298 (17) | 0.0329 (16) | −0.0020 (13) | 0.0122 (13) | 0.0016 (13) |
C8 | 0.0373 (17) | 0.0355 (18) | 0.0347 (17) | −0.0002 (14) | 0.0161 (14) | −0.0003 (13) |
C9 | 0.0359 (17) | 0.0379 (18) | 0.049 (2) | 0.0048 (14) | 0.0224 (16) | 0.0026 (15) |
C10 | 0.0321 (17) | 0.047 (2) | 0.046 (2) | 0.0054 (15) | 0.0074 (15) | 0.0050 (16) |
C11 | 0.0379 (18) | 0.051 (2) | 0.0327 (17) | 0.0030 (16) | 0.0067 (14) | −0.0022 (15) |
C12 | 0.0346 (16) | 0.0315 (17) | 0.0333 (17) | −0.0008 (13) | 0.0128 (13) | 0.0002 (13) |
C13 | 0.0502 (19) | 0.046 (2) | 0.0307 (17) | −0.0016 (16) | 0.0187 (15) | −0.0077 (14) |
C14 | 0.051 (2) | 0.056 (2) | 0.0341 (19) | −0.0037 (18) | 0.0128 (16) | −0.0026 (17) |
C15 | 0.0388 (17) | 0.0418 (18) | 0.0290 (16) | 0.0038 (15) | 0.0161 (14) | −0.0096 (14) |
C16 | 0.046 (2) | 0.050 (2) | 0.040 (2) | 0.0093 (17) | 0.0080 (16) | −0.0032 (16) |
C17 | 0.0337 (19) | 0.062 (3) | 0.064 (3) | 0.0006 (18) | 0.0062 (17) | −0.017 (2) |
C18 | 0.056 (2) | 0.055 (2) | 0.075 (3) | −0.0084 (19) | 0.035 (2) | −0.011 (2) |
Br1—C4 | 1.905 (3) | C8—C9 | 1.378 (4) |
Br2—C9 | 1.907 (3) | C8—H8 | 0.9300 |
N1—C1 | 1.384 (4) | C9—C10 | 1.388 (5) |
N1—C12 | 1.385 (4) | C10—C11 | 1.369 (4) |
N1—C13 | 1.459 (4) | C10—H10 | 0.9300 |
N2—C18 | 1.329 (5) | C11—C12 | 1.395 (4) |
N2—C14 | 1.333 (4) | C11—H11 | 0.9300 |
C1—C2 | 1.389 (4) | C13—C15 | 1.510 (4) |
C1—C6 | 1.407 (4) | C13—H13A | 0.9700 |
C2—C3 | 1.375 (4) | C13—H13B | 0.9700 |
C2—H2 | 0.9300 | C14—C15 | 1.375 (5) |
C3—C4 | 1.392 (5) | C14—H14 | 0.9300 |
C3—H3 | 0.9300 | C15—C16 | 1.377 (4) |
C4—C5 | 1.376 (4) | C16—C17 | 1.377 (5) |
C5—C6 | 1.395 (4) | C16—H16 | 0.9300 |
C5—H5 | 0.9300 | C17—C18 | 1.375 (6) |
C6—C7 | 1.443 (4) | C17—H17 | 0.9300 |
C7—C8 | 1.393 (4) | C18—H18 | 0.9300 |
C7—C12 | 1.401 (4) | ||
C1—N1—C12 | 108.5 (2) | C11—C10—C9 | 120.2 (3) |
C1—N1—C13 | 127.2 (3) | C11—C10—H10 | 119.9 |
C12—N1—C13 | 124.3 (2) | C9—C10—H10 | 119.9 |
C18—N2—C14 | 115.8 (3) | C10—C11—C12 | 118.2 (3) |
N1—C1—C2 | 129.7 (3) | C10—C11—H11 | 120.9 |
N1—C1—C6 | 109.0 (2) | C12—C11—H11 | 120.9 |
C2—C1—C6 | 121.3 (3) | N1—C12—C11 | 129.6 (3) |
C3—C2—C1 | 117.9 (3) | N1—C12—C7 | 109.3 (3) |
C3—C2—H2 | 121.0 | C11—C12—C7 | 121.1 (3) |
C1—C2—H2 | 121.0 | N1—C13—C15 | 111.9 (3) |
C2—C3—C4 | 120.4 (3) | N1—C13—H13A | 109.2 |
C2—C3—H3 | 119.8 | C15—C13—H13A | 109.2 |
C4—C3—H3 | 119.8 | N1—C13—H13B | 109.2 |
C5—C4—C3 | 123.0 (3) | C15—C13—H13B | 109.2 |
C5—C4—Br1 | 118.7 (2) | H13A—C13—H13B | 107.9 |
C3—C4—Br1 | 118.3 (2) | N2—C14—C15 | 125.6 (3) |
C4—C5—C6 | 116.8 (3) | N2—C14—H14 | 117.2 |
C4—C5—H5 | 121.6 | C15—C14—H14 | 117.2 |
C6—C5—H5 | 121.6 | C14—C15—C16 | 116.7 (3) |
C5—C6—C1 | 120.5 (3) | C14—C15—C13 | 120.9 (3) |
C5—C6—C7 | 132.8 (3) | C16—C15—C13 | 122.4 (3) |
C1—C6—C7 | 106.7 (2) | C17—C16—C15 | 119.5 (3) |
C8—C7—C12 | 120.7 (3) | C17—C16—H16 | 120.2 |
C8—C7—C6 | 132.7 (3) | C15—C16—H16 | 120.2 |
C12—C7—C6 | 106.6 (3) | C18—C17—C16 | 118.6 (3) |
C9—C8—C7 | 116.6 (3) | C18—C17—H17 | 120.7 |
C9—C8—H8 | 121.7 | C16—C17—H17 | 120.7 |
C7—C8—H8 | 121.7 | N2—C18—C17 | 123.7 (4) |
C8—C9—C10 | 123.2 (3) | N2—C18—H18 | 118.1 |
C8—C9—Br2 | 118.3 (2) | C17—C18—H18 | 118.1 |
C10—C9—Br2 | 118.5 (2) | ||
C12—N1—C1—C2 | 179.2 (3) | C8—C9—C10—C11 | −1.8 (5) |
C13—N1—C1—C2 | −2.0 (5) | Br2—C9—C10—C11 | 179.0 (2) |
C12—N1—C1—C6 | −0.1 (3) | C9—C10—C11—C12 | 1.0 (5) |
C13—N1—C1—C6 | 178.8 (3) | C1—N1—C12—C11 | −178.7 (3) |
N1—C1—C2—C3 | −178.6 (3) | C13—N1—C12—C11 | 2.4 (5) |
C6—C1—C2—C3 | 0.6 (5) | C1—N1—C12—C7 | 0.3 (3) |
C1—C2—C3—C4 | −0.3 (5) | C13—N1—C12—C7 | −178.6 (3) |
C2—C3—C4—C5 | −0.1 (5) | C10—C11—C12—N1 | 178.9 (3) |
C2—C3—C4—Br1 | 179.4 (2) | C10—C11—C12—C7 | 0.0 (5) |
C3—C4—C5—C6 | 0.2 (5) | C8—C7—C12—N1 | −179.5 (3) |
Br1—C4—C5—C6 | −179.3 (2) | C6—C7—C12—N1 | −0.3 (3) |
C4—C5—C6—C1 | 0.0 (4) | C8—C7—C12—C11 | −0.4 (5) |
C4—C5—C6—C7 | 178.8 (3) | C6—C7—C12—C11 | 178.8 (3) |
N1—C1—C6—C5 | 178.9 (3) | C1—N1—C13—C15 | −107.0 (3) |
C2—C1—C6—C5 | −0.4 (4) | C12—N1—C13—C15 | 71.7 (4) |
N1—C1—C6—C7 | −0.1 (3) | C18—N2—C14—C15 | −0.1 (5) |
C2—C1—C6—C7 | −179.5 (3) | N2—C14—C15—C16 | 1.7 (5) |
C5—C6—C7—C8 | 0.4 (6) | N2—C14—C15—C13 | −177.1 (3) |
C1—C6—C7—C8 | 179.3 (3) | N1—C13—C15—C14 | 60.6 (4) |
C5—C6—C7—C12 | −178.6 (3) | N1—C13—C15—C16 | −118.1 (3) |
C1—C6—C7—C12 | 0.3 (3) | C14—C15—C16—C17 | −1.4 (5) |
C12—C7—C8—C9 | −0.3 (4) | C13—C15—C16—C17 | 177.3 (3) |
C6—C7—C8—C9 | −179.2 (3) | C15—C16—C17—C18 | −0.3 (5) |
C7—C8—C9—C10 | 1.4 (5) | C14—N2—C18—C17 | −1.8 (6) |
C7—C8—C9—Br2 | −179.4 (2) | C16—C17—C18—N2 | 2.1 (6) |
D—H···A | D—H | H···A | D···A | D—H···A |
C11—H11···Br1i | 0.93 | 2.89 | 3.595 (3) | 134 |
Symmetry code: (i) x+1, y, z+1. |
Experimental details
Crystal data | |
Chemical formula | C18H12Br2N2 |
Mr | 416.12 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 294 |
a, b, c (Å) | 10.469 (3), 16.405 (5), 9.866 (3) |
β (°) | 112.761 (4) |
V (Å3) | 1562.6 (8) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 5.19 |
Crystal size (mm) | 0.26 × 0.22 × 0.14 |
Data collection | |
Diffractometer | Bruker SMART CCD area-detector diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 1997) |
Tmin, Tmax | 0.258, 0.484 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 8670, 3194, 2238 |
Rint | 0.046 |
(sin θ/λ)max (Å−1) | 0.627 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.034, 0.078, 1.00 |
No. of reflections | 3194 |
No. of parameters | 200 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.48, −0.52 |
Computer programs: SMART (Bruker, 1997), SAINT (Bruker, 1997), SAINT, SHELXS97 (Sheldrick, 1997), SHELXL97 (Sheldrick, 1997), SHELXTL (Bruker, 1997), SHELXTL.
D—H···A | D—H | H···A | D···A | D—H···A |
C11—H11···Br1i | 0.93 | 2.89 | 3.595 (3) | 134 |
Symmetry code: (i) x+1, y, z+1. |
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Carbazole derivatives substituted by N-alkylation possess valuable pharmaceutical properties (Buu-Hoï & Royer, 1950; Harfenist & Joyner, 1983; Caulfield et al., 2002; Harper et al., 2002). The title compound 3,6-dibromo-9-(3-pyridylmethyl)-9H-carbazole, (I) (Fig. 1), was synthesized by N-alkylation of 3-(Chloromethyl)pyridine with 3,6-dibromo-9H-carbazole.
The carbazole ring is essentially planar, with mean deviations of 0.0138 Å. These values are consistent with those previously reported (Huang et al., 2005; Duan, Han et al., 2005 or Duan, Huang et al., 2005). The dihedral angle formed between the carbazole ring and the plane of the pyridine ring is 96.7 (su?)°. C—Br distances are in the range 1.905 (3) to 1.907 (3) Å and are consistent with literature values (Allen et al., 1987). In the crystal structure, π–π interactions are observed; the shortest, 3.519 Å, is between the N1, C?–C12 and C7–C12 rings of molecules related by (1 − x, −y, 2 − z). In addition, there are C—H···Br interactions, as shown in Fig. 2 and detailed in Table 1.