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metal-organic compounds
The structure of the title one-dimensional coordination polymer, [Co(C7H3NO4)(H2O)3]n, contains a CoII ion, a pyridine-2,3-dicarboxylate dianion and three water molecules in the asymmetric unit. The coordination polymer forms a one-dimensional zigzag chain structure along the c axis. The chains are interconnected by O—HO hydrogen bonds into a three-dimensional framework.
Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536803026023/ci6305sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S1600536803026023/ci6305Isup2.hkl |
CCDC reference: 227754
Key indicators
- Single-crystal X-ray study
- T = 298 K
- Mean (C-C) = 0.006 Å
- R factor = 0.035
- wR factor = 0.068
- Data-to-parameter ratio = 9.1
checkCIF/PLATON results
No syntax errors found
Alert level C PLAT042_ALERT_1_C Calc. and Rep. MoietyFormula Strings Differ .... ? PLAT720_ALERT_4_C Number of Unusual/Non-Standard Label(s) ........ 6 PLAT731_ALERT_1_C Bond Calc 0.86(3), Rep 0.850(10) ...... 3.00 su-Rat O1W -H1W1 1.555 1.555 PLAT735_ALERT_1_C D-H Calc 0.86(3), Rep 0.850(10) ...... 3.00 su-Rat O1W -H1# 1.555 1.555 PLAT736_ALERT_1_C H...A Calc 1.87(3), Rep 1.870(10) ...... 3.00 su-Rat H1# -O4 1.555 3.565
Alert level G FORMU01_ALERT_1_G There is a discrepancy between the atom counts in the _chemical_formula_sum and _chemical_formula_moiety. This is usually due to the moiety formula being in the wrong format. Atom count from _chemical_formula_sum: C7 H9 Co1 N1 O7 Atom count from _chemical_formula_moiety: REFLT03_ALERT_4_G Please check that the estimate of the number of Friedel pairs is correct. If it is not, please give the correct count in the _publ_section_exptl_refinement section of the submitted CIF. From the CIF: _diffrn_reflns_theta_max 25.00 From the CIF: _reflns_number_total 1480 Count of symmetry unique reflns 862 Completeness (_total/calc) 171.69% TEST3: Check Friedels for noncentro structure Estimate of Friedel pairs measured 618 Fraction of Friedel pairs measured 0.717 Are heavy atom types Z>Si present yes
0 ALERT level A = In general: serious problem 0 ALERT level B = Potentially serious problem 5 ALERT level C = Check and explain 2 ALERT level G = General alerts; check 5 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 0 ALERT type 2 Indicator that the structure model may be wrong or deficient 0 ALERT type 3 Indicator that the structure quality may be low 2 ALERT type 4 Improvement, methodology, query or suggestion
Computing details top
Data collection: R3m Software (Siemens, 1990); cell refinement: R3m Software; data reduction: R3m Software; program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: ORTEPII (Johnson, 1976); software used to prepare material for publication: SHELXL97.
Crystal data top
[Co(C7H3NO4)(H2O)3] | F(000) = 564 |
Mr = 278.08 | Dx = 2.011 Mg m−3 |
Orthorhombic, Pca21 | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: P 2c -2ac | Cell parameters from 25 reflections |
a = 16.082 (3) Å | θ = 7.5–15.0° |
b = 6.745 (1) Å | µ = 1.89 mm−1 |
c = 8.467 (2) Å | T = 298 K |
V = 918.4 (3) Å3 | Plate, red |
Z = 4 | 0.28 × 0.20 × 0.04 mm |
Data collection top
Siemens R3m four-circle diffractometer | 1380 reflections with I > 2σ(I) |
Radiation source: fine-focus sealed tube | Rint = 0.036 |
Graphite monochromator | θmax = 25.0°, θmin = 2.5° |
ω scans | h = −19→14 |
Absorption correction: empirical (using intensity measurements) ψ scan (North et al., 1968) | k = −8→8 |
Tmin = 0.62, Tmax = 0.93 | l = −8→10 |
3513 measured reflections | 2 standard reflections every 120 reflections |
1480 independent reflections | intensity decay: none |
Refinement top
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.035 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.068 | w = 1/[σ2(Fo2) + (0.0348P)2] where P = (Fo2 + 2Fc2)/3 |
S = 0.97 | (Δ/σ)max < 0.001 |
1480 reflections | Δρmax = 0.30 e Å−3 |
163 parameters | Δρmin = −0.34 e Å−3 |
10 restraints | Absolute structure: Flack (1988); 691 Friedel pairs |
Primary atom site location: structure-invariant direct methods | Absolute structure parameter: 0.06 (2) |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
x | y | z | Uiso*/Ueq | ||
Co1 | 0.40344 (3) | 0.42124 (7) | 0.50000 (8) | 0.0205 (2) | |
O1 | 0.2857 (2) | 0.5111 (4) | 0.4437 (4) | 0.027 (1) | |
O2 | 0.1518 (2) | 0.4591 (3) | 0.4898 (5) | 0.027 (1) | |
O3 | 0.0668 (2) | 0.2884 (4) | 0.7847 (3) | 0.024 (1) | |
O4 | 0.0570 (2) | 0.0870 (4) | 0.5801 (4) | 0.026 (1) | |
O1w | 0.4560 (2) | 0.6767 (4) | 0.4040 (4) | 0.027 (1) | |
O2w | 0.5235 (2) | 0.3047 (4) | 0.5730 (4) | 0.023 (1) | |
O3w | 0.4104 (2) | 0.5760 (5) | 0.7089 (3) | 0.026 (1) | |
N1 | 0.3301 (2) | 0.2040 (5) | 0.6186 (4) | 0.020 (1) | |
C1 | 0.2269 (2) | 0.4193 (5) | 0.5079 (8) | 0.022 (1) | |
C2 | 0.2485 (3) | 0.2468 (6) | 0.6107 (5) | 0.017 (1) | |
C3 | 0.1893 (2) | 0.1350 (6) | 0.6911 (5) | 0.019 (1) | |
C4 | 0.0977 (2) | 0.1767 (6) | 0.6825 (5) | 0.019 (1) | |
C5 | 0.2166 (3) | −0.0231 (6) | 0.7800 (6) | 0.026 (1) | |
C6 | 0.2994 (3) | −0.0630 (6) | 0.7903 (6) | 0.026 (1) | |
C7 | 0.3541 (3) | 0.0533 (6) | 0.7062 (5) | 0.026 (1) | |
H1w1 | 0.489 (2) | 0.757 (5) | 0.451 (3) | 0.033* | |
H1w2 | 0.465 (2) | 0.682 (6) | 0.305 (1) | 0.033* | |
H2w1 | 0.536 (2) | 0.184 (2) | 0.553 (5) | 0.028* | |
H2w2 | 0.568 (1) | 0.373 (4) | 0.559 (5) | 0.028* | |
H3w1 | 0.393 (2) | 0.538 (6) | 0.798 (2) | 0.031* | |
H3w2 | 0.458 (1) | 0.629 (6) | 0.716 (4) | 0.031* | |
H5 | 0.1785 | −0.1025 | 0.8331 | 0.032* | |
H6 | 0.3186 | −0.1667 | 0.8528 | 0.032* | |
H7 | 0.4105 | 0.0241 | 0.7116 | 0.031* |
Atomic displacement parameters (Å2) top
U11 | U22 | U33 | U12 | U13 | U23 | |
Co1 | 0.0168 (3) | 0.0236 (3) | 0.0211 (3) | −0.0015 (2) | 0.0002 (3) | 0.0019 (3) |
O1 | 0.018 (2) | 0.029 (2) | 0.034 (2) | −0.002 (1) | −0.002 (1) | 0.011 (1) |
O2 | 0.018 (1) | 0.032 (2) | 0.032 (2) | 0.003 (1) | −0.003 (2) | 0.011 (2) |
O3 | 0.018 (2) | 0.031 (2) | 0.023 (2) | 0.006 (1) | 0.000 (1) | −0.009 (2) |
O4 | 0.021 (2) | 0.024 (2) | 0.034 (2) | 0.001 (1) | −0.005 (1) | −0.005 (1) |
O1w | 0.031 (2) | 0.030 (2) | 0.022 (2) | −0.009 (1) | 0.001 (1) | 0.000 (2) |
O2w | 0.018 (2) | 0.023 (2) | 0.028 (2) | 0.001 (1) | −0.001 (1) | 0.002 (1) |
O3w | 0.024 (2) | 0.032 (2) | 0.021 (2) | −0.006 (1) | 0.004 (1) | −0.001 (2) |
N1 | 0.016 (2) | 0.021 (2) | 0.022 (2) | −0.001 (2) | 0.001 (2) | 0.001 (2) |
C1 | 0.021 (2) | 0.025 (2) | 0.020 (2) | 0.005 (2) | −0.007 (3) | −0.013 (2) |
C2 | 0.014 (2) | 0.020 (2) | 0.017 (2) | −0.003 (2) | 0.001 (2) | −0.002 (2) |
C3 | 0.020 (2) | 0.019 (2) | 0.017 (2) | 0.004 (2) | −0.005 (2) | −0.005 (2) |
C4 | 0.014 (2) | 0.019 (2) | 0.023 (2) | −0.003 (2) | 0.003 (2) | 0.008 (2) |
C5 | 0.029 (3) | 0.022 (2) | 0.029 (3) | −0.002 (2) | 0.005 (2) | −0.001 (2) |
C6 | 0.024 (3) | 0.021 (2) | 0.034 (3) | 0.003 (2) | −0.001 (2) | 0.009 (2) |
C7 | 0.020 (3) | 0.026 (2) | 0.031 (3) | 0.006 (2) | −0.003 (2) | −0.003 (2) |
Geometric parameters (Å, º) top
Co1—O1 | 2.044 (3) | C3—C5 | 1.378 (6) |
Co1—O3i | 2.087 (3) | C3—C4 | 1.502 (5) |
Co1—O1w | 2.084 (3) | C5—C6 | 1.361 (5) |
Co1—O2w | 2.175 (3) | C6—C7 | 1.377 (6) |
Co1—O3w | 2.057 (3) | O1w—H1w1 | 0.85 (1) |
Co1—N1 | 2.133 (3) | O1w—H1w2 | 0.85 (1) |
O1—C1 | 1.255 (5) | O2w—H2w1 | 0.86 (1) |
O2—C1 | 1.246 (4) | O2w—H2w2 | 0.86 (1) |
O3—C4 | 1.250 (5) | O3w—H3w1 | 0.85 (1) |
O4—C4 | 1.244 (5) | O3w—H3w2 | 0.84 (1) |
N1—C7 | 1.316 (5) | C5—H5 | 0.93 |
N1—C2 | 1.344 (5) | C6—H6 | 0.93 |
C1—C2 | 1.494 (6) | C7—H7 | 0.93 |
C2—C3 | 1.392 (6) | ||
O1—Co1—O3i | 97.8 (1) | C3—C2—C1 | 123.2 (4) |
O1—Co1—O1w | 92.3 (1) | C5—C3—C2 | 117.9 (4) |
O1—Co1—O2w | 174.8 (1) | C5—C3—C4 | 119.0 (4) |
O1—Co1—O3w | 95.8 (1) | C2—C3—C4 | 123.1 (4) |
O1—Co1—N1 | 78.5 (1) | O4—C4—O3 | 124.5 (4) |
O3i—Co1—O1w | 85.5 (1) | O4—C4—C3 | 117.3 (4) |
O3i—Co1—O2w | 83.7 (1) | O3—C4—C3 | 118.0 (4) |
O3i—Co1—O3w | 163.1 (1) | C6—C5—C3 | 120.0 (4) |
O3i—Co1—N1 | 104.1 (1) | C5—C6—C7 | 118.6 (4) |
O1w—Co1—O2w | 92.9 (1) | N1—C7—C6 | 123.0 (4) |
O1w—Co1—O3w | 83.9 (1) | Co1—O1w—H1w1 | 126 (2) |
O1w—Co1—N1 | 167.4 (1) | Co1—O1w—H1w2 | 119 (2) |
O2w—Co1—O3w | 83.7 (1) | H1w1—O1w—H1w2 | 109 (2) |
O2w—Co1—N1 | 96.3 (1) | Co1—O2w—H2w1 | 120 (2) |
O3w—Co1—N1 | 88.5 (1) | Co1—O2w—H2w2 | 120 (3) |
C1—O1—Co1 | 116.8 (3) | H2w1—O2w—H2w2 | 107 (2) |
C4—O3—Co1ii | 140.6 (3) | Co1—O3w—H3w1 | 127 (3) |
C7—N1—C2 | 118.7 (3) | Co1—O3w—H3w2 | 109 (3) |
C7—N1—Co1 | 129.3 (3) | H3w1—O3w—H3w2 | 111 (2) |
C2—N1—Co1 | 111.6 (2) | C6—C5—H5 | 120.0 |
O2—C1—O1 | 124.8 (5) | C3—C5—H5 | 120.0 |
O2—C1—C2 | 117.7 (4) | C5—C6—H6 | 120.7 |
O1—C1—C2 | 117.5 (3) | C7—C6—H6 | 120.7 |
N1—C2—C3 | 121.8 (4) | N1—C7—H7 | 118.5 |
N1—C2—C1 | 115.0 (3) | C6—C7—H7 | 118.5 |
O3w—Co1—O1—C1 | −81.8 (3) | O2—C1—C2—N1 | 176.3 (4) |
O1w—Co1—O1—C1 | −165.9 (3) | O1—C1—C2—N1 | −2.3 (6) |
O3i—Co1—O1—C1 | 108.3 (3) | O2—C1—C2—C3 | −2.6 (7) |
N1—Co1—O1—C1 | 5.5 (3) | O1—C1—C2—C3 | 178.7 (4) |
O1—Co1—N1—C7 | −179.3 (4) | N1—C2—C3—C5 | −0.1 (6) |
O3w—Co1—N1—C7 | −83.1 (4) | C1—C2—C3—C5 | 178.8 (4) |
O1w—Co1—N1—C7 | −135.8 (6) | N1—C2—C3—C4 | −178.9 (4) |
O3i—Co1—N1—C7 | 85.4 (4) | C1—C2—C3—C4 | −0.1 (6) |
O2w—Co1—N1—C7 | 0.4 (4) | Co1ii—O3—C4—O4 | 163.2 (3) |
O1—Co1—N1—C2 | −6.4 (2) | Co1ii—O3—C4—C3 | −11.9 (6) |
O3w—Co1—N1—C2 | 89.8 (3) | C5—C3—C4—O4 | −86.3 (5) |
O1w—Co1—N1—C2 | 37.1 (7) | C2—C3—C4—O4 | 92.5 (5) |
O3i—Co1—N1—C2 | −101.7 (3) | C5—C3—C4—O3 | 89.1 (5) |
O2w—Co1—N1—C2 | 173.3 (3) | C2—C3—C4—O3 | −92.1 (5) |
Co1—O1—C1—O2 | 177.8 (4) | C2—C3—C5—C6 | 1.5 (7) |
Co1—O1—C1—C2 | −3.6 (5) | C4—C3—C5—C6 | −179.6 (4) |
C7—N1—C2—C3 | −0.7 (6) | C3—C5—C6—C7 | −2.1 (7) |
Co1—N1—C2—C3 | −174.5 (3) | C2—N1—C7—C6 | 0.1 (6) |
C7—N1—C2—C1 | −179.7 (4) | Co1—N1—C7—C6 | 172.6 (3) |
Co1—N1—C2—C1 | 6.6 (4) | C5—C6—C7—N1 | 1.3 (7) |
Symmetry codes: (i) −x+1/2, y, z−1/2; (ii) −x+1/2, y, z+1/2. |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
O1w—H1w1···O4iii | 0.85 (1) | 1.87 (1) | 2.720 (4) | 172 (3) |
O1w—H1w2···O2wiv | 0.85 (1) | 1.98 (1) | 2.825 (5) | 175 (4) |
O2w—H2w2···O2iii | 0.86 (1) | 1.86 (1) | 2.700 (4) | 167 (4) |
O2w—H2w1···O4v | 0.86 (1) | 1.87 (2) | 2.697 (4) | 161 (4) |
O3w—H3w2···O3iii | 0.84 (1) | 1.93 (2) | 2.752 (4) | 165 (4) |
O3w—H3w1···O2ii | 0.85 (1) | 1.85 (1) | 2.698 (5) | 176 (4) |
Symmetry codes: (ii) −x+1/2, y, z+1/2; (iii) x+1/2, −y+1, z; (iv) −x+1, −y+1, z−1/2; (v) x+1/2, −y, z. |
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