Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536807054347/cv2334sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S1600536807054347/cv2334Isup2.hkl |
CCDC reference: 672834
Key indicators
- Single-crystal X-ray study
- T = 295 K
- Mean (C-C) = 0.005 Å
- R factor = 0.051
- wR factor = 0.187
- Data-to-parameter ratio = 13.4
checkCIF/PLATON results
No syntax errors found
Alert level C PLAT066_ALERT_1_C Predicted and Reported Transmissions Identical . ? PLAT230_ALERT_2_C Hirshfeld Test Diff for C10 - C11 .. 5.51 su PLAT241_ALERT_2_C Check High Ueq as Compared to Neighbors for C5 PLAT242_ALERT_2_C Check Low Ueq as Compared to Neighbors for C2 PLAT250_ALERT_2_C Large U3/U1 Ratio for Average U(i,j) Tensor .... 2.05 PLAT340_ALERT_3_C Low Bond Precision on C-C Bonds (x 1000) Ang ... 5
0 ALERT level A = In general: serious problem 0 ALERT level B = Potentially serious problem 6 ALERT level C = Check and explain 0 ALERT level G = General alerts; check 1 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 4 ALERT type 2 Indicator that the structure model may be wrong or deficient 1 ALERT type 3 Indicator that the structure quality may be low 0 ALERT type 4 Improvement, methodology, query or suggestion 0 ALERT type 5 Informative message, check
For related literature, see: Allen et al. (1987); Anderson et al. (1997); Garnovski et al. (1993); Musie et al. (2001); Paul et al. (2002); Xu et al. (2002).
The 2-(1H-benzo[d][1,2,3]triazol-1-yl)acetohydrazide (1 mmol, 191.2 mg) was added to acetone solvent (20 ml). The mixture was stirred under reflux conditions (343 K) for 3 h to give a clear solution. The solution was filtered and after a week colourless crystals suitable for X-ray diffraction study were obtained. M.p. 207–208 K. Analysis: calculated for C11H13N5O: C 57.13, H 5.67, N 30.27%; found: C57.10, H 5.71, N 30.22%.
All H atoms were placed in idealized positions (C—H = 0.93–0.97 Å, N—H = 0.86 Å) and refined as riding atoms, with Uiso(H) = 1.2–1.5Ueq of the parent atom.
Data collection: SMART (Siemens, 1996); cell refinement: SAINT (Siemens, 1996); data reduction: SAINT (Siemens, 1996); program(s) used to solve structure: SHELXS97 (Sheldrick, 1997a); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997a); molecular graphics: SHELXTL (Sheldrick, 1997b); software used to prepare material for publication: SHELXTL (Sheldrick, 1997b).
C11H13N5O | F(000) = 488 |
Mr = 231.26 | Dx = 1.297 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 1111 reflections |
a = 10.841 (2) Å | θ = 2.4–25.7° |
b = 13.426 (3) Å | µ = 0.09 mm−1 |
c = 8.2811 (17) Å | T = 295 K |
β = 100.737 (4)° | Block, colourless |
V = 1184.3 (4) Å3 | 0.15 × 0.12 × 0.10 mm |
Z = 4 |
Bruker SMART CCD area-detector diffractometer | 2094 independent reflections |
Radiation source: fine-focus sealed tube | 1325 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.030 |
ϕ and ω scans | θmax = 25.1°, θmin = 1.9° |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −12→7 |
Tmin = 0.987, Tmax = 0.991 | k = −15→15 |
6155 measured reflections | l = −9→9 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.051 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.187 | H-atom parameters constrained |
S = 1.00 | w = 1/[σ2(Fo2) + (0.1178P)2 + 0.0018P] where P = (Fo2 + 2Fc2)/3 |
2094 reflections | (Δ/σ)max = 0.002 |
156 parameters | Δρmax = 0.18 e Å−3 |
0 restraints | Δρmin = −0.19 e Å−3 |
C11H13N5O | V = 1184.3 (4) Å3 |
Mr = 231.26 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 10.841 (2) Å | µ = 0.09 mm−1 |
b = 13.426 (3) Å | T = 295 K |
c = 8.2811 (17) Å | 0.15 × 0.12 × 0.10 mm |
β = 100.737 (4)° |
Bruker SMART CCD area-detector diffractometer | 2094 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | 1325 reflections with I > 2σ(I) |
Tmin = 0.987, Tmax = 0.991 | Rint = 0.030 |
6155 measured reflections |
R[F2 > 2σ(F2)] = 0.051 | 0 restraints |
wR(F2) = 0.187 | H-atom parameters constrained |
S = 1.00 | Δρmax = 0.18 e Å−3 |
2094 reflections | Δρmin = −0.19 e Å−3 |
156 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
O1 | 0.22589 (17) | 0.83827 (14) | 0.08278 (19) | 0.0729 (6) | |
N1 | 0.40099 (19) | 0.91461 (15) | 0.3268 (2) | 0.0556 (6) | |
N2 | 0.3838 (2) | 1.01387 (19) | 0.3451 (3) | 0.0759 (7) | |
N3 | 0.4713 (3) | 1.06118 (16) | 0.2900 (3) | 0.0789 (8) | |
N4 | 0.05295 (19) | 0.70349 (16) | 0.1188 (2) | 0.0602 (6) | |
N5 | 0.13678 (18) | 0.74222 (15) | 0.2524 (2) | 0.0587 (6) | |
H5 | 0.1346 | 0.7241 | 0.3514 | 0.070* | |
C1 | −0.1164 (3) | 0.6016 (2) | −0.0022 (4) | 0.0843 (10) | |
H1A | −0.0926 | 0.6281 | −0.0996 | 0.126* | |
H1B | −0.2009 | 0.6213 | 0.0016 | 0.126* | |
H1C | −0.1113 | 0.5302 | −0.0037 | 0.126* | |
C2 | −0.0295 (2) | 0.6409 (2) | 0.1464 (3) | 0.0591 (7) | |
C3 | −0.0470 (3) | 0.6041 (3) | 0.3097 (4) | 0.0995 (12) | |
H3A | 0.0069 | 0.5479 | 0.3410 | 0.149* | |
H3B | −0.1328 | 0.5844 | 0.3040 | 0.149* | |
H3C | −0.0263 | 0.6561 | 0.3898 | 0.149* | |
C4 | 0.2205 (2) | 0.80851 (19) | 0.2198 (3) | 0.0550 (7) | |
C5 | 0.3128 (3) | 0.8439 (2) | 0.3710 (3) | 0.0744 (9) | |
H5A | 0.2669 | 0.8747 | 0.4478 | 0.089* | |
H5B | 0.3581 | 0.7872 | 0.4251 | 0.089* | |
C6 | 0.5010 (2) | 0.89849 (16) | 0.2542 (3) | 0.0471 (6) | |
C7 | 0.5460 (2) | 0.99256 (18) | 0.2310 (3) | 0.0577 (7) | |
C8 | 0.6471 (4) | 1.0065 (3) | 0.1553 (4) | 0.0903 (11) | |
H8 | 0.6770 | 1.0699 | 0.1395 | 0.108* | |
C9 | 0.7013 (3) | 0.9248 (5) | 0.1048 (4) | 0.1078 (14) | |
H9 | 0.7700 | 0.9321 | 0.0533 | 0.129* | |
C10 | 0.6563 (4) | 0.8293 (4) | 0.1283 (4) | 0.1016 (13) | |
H10 | 0.6956 | 0.7747 | 0.0906 | 0.122* | |
C11 | 0.5558 (3) | 0.8132 (2) | 0.2054 (3) | 0.0691 (8) | |
H11 | 0.5269 | 0.7497 | 0.2234 | 0.083* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.0772 (13) | 0.1055 (15) | 0.0345 (10) | −0.0323 (10) | 0.0061 (8) | 0.0034 (8) |
N1 | 0.0561 (13) | 0.0654 (13) | 0.0429 (11) | −0.0076 (10) | 0.0033 (10) | −0.0075 (9) |
N2 | 0.0823 (18) | 0.0720 (16) | 0.0655 (15) | 0.0156 (13) | −0.0069 (13) | −0.0223 (12) |
N3 | 0.103 (2) | 0.0483 (13) | 0.0728 (17) | 0.0026 (14) | −0.0159 (15) | −0.0053 (11) |
N4 | 0.0559 (13) | 0.0835 (14) | 0.0378 (11) | −0.0124 (11) | 0.0004 (9) | −0.0005 (9) |
N5 | 0.0576 (13) | 0.0859 (15) | 0.0309 (10) | −0.0169 (11) | 0.0034 (9) | 0.0024 (9) |
C1 | 0.0673 (19) | 0.112 (2) | 0.070 (2) | −0.0265 (16) | 0.0024 (15) | −0.0121 (15) |
C2 | 0.0534 (16) | 0.0739 (17) | 0.0499 (15) | −0.0065 (13) | 0.0091 (12) | −0.0015 (12) |
C3 | 0.104 (3) | 0.132 (3) | 0.063 (2) | −0.053 (2) | 0.0172 (18) | 0.0070 (17) |
C4 | 0.0533 (15) | 0.0777 (16) | 0.0343 (13) | −0.0093 (13) | 0.0085 (11) | −0.0025 (11) |
C5 | 0.0662 (18) | 0.114 (2) | 0.0405 (14) | −0.0309 (16) | 0.0047 (12) | −0.0013 (14) |
C6 | 0.0518 (14) | 0.0485 (14) | 0.0371 (12) | −0.0028 (11) | −0.0020 (10) | −0.0015 (9) |
C7 | 0.0669 (17) | 0.0536 (15) | 0.0470 (14) | −0.0098 (13) | −0.0037 (12) | 0.0057 (11) |
C8 | 0.088 (2) | 0.118 (3) | 0.0598 (19) | −0.042 (2) | −0.0013 (17) | 0.0257 (18) |
C9 | 0.069 (2) | 0.197 (5) | 0.057 (2) | −0.012 (3) | 0.0109 (17) | 0.002 (3) |
C10 | 0.085 (3) | 0.145 (4) | 0.068 (2) | 0.046 (2) | −0.0028 (19) | −0.034 (2) |
C11 | 0.081 (2) | 0.0591 (16) | 0.0598 (17) | 0.0144 (14) | −0.0050 (15) | −0.0113 (12) |
O1—C4 | 1.215 (3) | C3—H3B | 0.9600 |
N1—C6 | 1.352 (3) | C3—H3C | 0.9600 |
N1—N2 | 1.358 (3) | C4—C5 | 1.526 (3) |
N1—C5 | 1.441 (3) | C5—H5A | 0.9700 |
N2—N3 | 1.293 (3) | C5—H5B | 0.9700 |
N3—C7 | 1.375 (4) | C6—C7 | 1.380 (3) |
N4—C2 | 1.278 (3) | C6—C11 | 1.384 (3) |
N4—N5 | 1.395 (3) | C7—C8 | 1.373 (4) |
N5—C4 | 1.334 (3) | C8—C9 | 1.347 (5) |
N5—H5 | 0.8600 | C8—H8 | 0.9300 |
C1—C2 | 1.500 (4) | C9—C10 | 1.399 (6) |
C1—H1A | 0.9600 | C9—H9 | 0.9300 |
C1—H1B | 0.9600 | C10—C11 | 1.379 (5) |
C1—H1C | 0.9600 | C10—H10 | 0.9300 |
C2—C3 | 1.485 (4) | C11—H11 | 0.9300 |
C3—H3A | 0.9600 | ||
C6—N1—N2 | 110.2 (2) | N5—C4—C5 | 114.2 (2) |
C6—N1—C5 | 129.2 (2) | N1—C5—C4 | 111.2 (2) |
N2—N1—C5 | 120.4 (2) | N1—C5—H5A | 109.4 |
N3—N2—N1 | 108.5 (2) | C4—C5—H5A | 109.4 |
N2—N3—C7 | 108.4 (2) | N1—C5—H5B | 109.4 |
C2—N4—N5 | 118.48 (19) | C4—C5—H5B | 109.4 |
C4—N5—N4 | 117.10 (18) | H5A—C5—H5B | 108.0 |
C4—N5—H5 | 121.4 | N1—C6—C7 | 104.4 (2) |
N4—N5—H5 | 121.4 | N1—C6—C11 | 133.3 (2) |
C2—C1—H1A | 109.5 | C7—C6—C11 | 122.3 (3) |
C2—C1—H1B | 109.5 | C8—C7—N3 | 130.1 (3) |
H1A—C1—H1B | 109.5 | C8—C7—C6 | 121.4 (3) |
C2—C1—H1C | 109.5 | N3—C7—C6 | 108.5 (2) |
H1A—C1—H1C | 109.5 | C9—C8—C7 | 117.6 (3) |
H1B—C1—H1C | 109.5 | C9—C8—H8 | 121.2 |
N4—C2—C3 | 126.5 (2) | C7—C8—H8 | 121.2 |
N4—C2—C1 | 116.0 (2) | C8—C9—C10 | 121.3 (3) |
C3—C2—C1 | 117.6 (2) | C8—C9—H9 | 119.4 |
C2—C3—H3A | 109.5 | C10—C9—H9 | 119.4 |
C2—C3—H3B | 109.5 | C11—C10—C9 | 122.3 (3) |
H3A—C3—H3B | 109.5 | C11—C10—H10 | 118.9 |
C2—C3—H3C | 109.5 | C9—C10—H10 | 118.9 |
H3A—C3—H3C | 109.5 | C10—C11—C6 | 115.1 (3) |
H3B—C3—H3C | 109.5 | C10—C11—H11 | 122.4 |
O1—C4—N5 | 124.1 (2) | C6—C11—H11 | 122.4 |
O1—C4—C5 | 121.7 (2) | ||
C6—N1—N2—N3 | −1.5 (3) | C5—N1—C6—C11 | −3.4 (4) |
C5—N1—N2—N3 | −177.0 (2) | N2—N3—C7—C8 | 177.2 (3) |
N1—N2—N3—C7 | 1.3 (3) | N2—N3—C7—C6 | −0.7 (3) |
C2—N4—N5—C4 | −179.0 (2) | N1—C6—C7—C8 | −178.3 (2) |
N5—N4—C2—C3 | 0.3 (4) | C11—C6—C7—C8 | 1.1 (4) |
N5—N4—C2—C1 | −179.7 (2) | N1—C6—C7—N3 | −0.2 (2) |
N4—N5—C4—O1 | 1.7 (4) | C11—C6—C7—N3 | 179.2 (2) |
N4—N5—C4—C5 | −177.3 (2) | N3—C7—C8—C9 | −178.0 (3) |
C6—N1—C5—C4 | −75.1 (3) | C6—C7—C8—C9 | −0.2 (4) |
N2—N1—C5—C4 | 99.4 (3) | C7—C8—C9—C10 | 0.1 (5) |
O1—C4—C5—N1 | 0.5 (4) | C8—C9—C10—C11 | −0.8 (5) |
N5—C4—C5—N1 | 179.5 (2) | C9—C10—C11—C6 | 1.5 (4) |
N2—N1—C6—C7 | 1.0 (2) | N1—C6—C11—C10 | 177.6 (2) |
C5—N1—C6—C7 | 176.0 (2) | C7—C6—C11—C10 | −1.6 (3) |
N2—N1—C6—C11 | −178.4 (2) |
D—H···A | D—H | H···A | D···A | D—H···A |
N5—H5···O1i | 0.86 | 2.16 | 2.933 (2) | 150 |
Symmetry code: (i) x, −y+3/2, z+1/2. |
Experimental details
Crystal data | |
Chemical formula | C11H13N5O |
Mr | 231.26 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 295 |
a, b, c (Å) | 10.841 (2), 13.426 (3), 8.2811 (17) |
β (°) | 100.737 (4) |
V (Å3) | 1184.3 (4) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.09 |
Crystal size (mm) | 0.15 × 0.12 × 0.10 |
Data collection | |
Diffractometer | Bruker SMART CCD area-detector diffractometer |
Absorption correction | Multi-scan (SADABS; Sheldrick, 1996) |
Tmin, Tmax | 0.987, 0.991 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 6155, 2094, 1325 |
Rint | 0.030 |
(sin θ/λ)max (Å−1) | 0.596 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.051, 0.187, 1.00 |
No. of reflections | 2094 |
No. of parameters | 156 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.18, −0.19 |
Computer programs: SMART (Siemens, 1996), SAINT (Siemens, 1996), SHELXS97 (Sheldrick, 1997a), SHELXL97 (Sheldrick, 1997a), SHELXTL (Sheldrick, 1997b).
D—H···A | D—H | H···A | D···A | D—H···A |
N5—H5···O1i | 0.86 | 2.16 | 2.933 (2) | 150.2 |
Symmetry code: (i) x, −y+3/2, z+1/2. |
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In recent years, a number of Schiff-bases have been investigated in terms of their coordination chemistry (Garnovski et al., 1993; Musie et al., 2001; Paul et al., 2002) and biological systems (Anderson et al., 1997). Schiff-bases containing the triazole group have attracted much attention because they exhibit potential bioactivities (Xu et al., 2002). In order to search for new triazole compounds with higher bioactivity, the title compound, (I), was synthesized and its crystal structure determined.
In (I) (Fig. 1), the bond lengths and angles are in good agreement with the expected values (Allen et al., 1987). In the crystal structure, the molecules are linked into infinite chains by N—H···O hydrogen bonds (Table 1, Fig. 2).