Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536807018879/dn2159sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S1600536807018879/dn2159Isup2.hkl |
CCDC reference: 239751
Key indicators
- Single-crystal X-ray study
- T = 304 K
- Mean (C-C) = 0.007 Å
- Disorder in main residue
- R factor = 0.044
- wR factor = 0.131
- Data-to-parameter ratio = 10.6
checkCIF/PLATON results
No syntax errors found
Alert level B PLAT241_ALERT_2_B Check High Ueq as Compared to Neighbors for Cl1B PLAT241_ALERT_2_B Check High Ueq as Compared to Neighbors for Cl3B PLAT242_ALERT_2_B Check Low Ueq as Compared to Neighbors for C4
Alert level C PLAT153_ALERT_1_C The su's on the Cell Axes are Equal (x 100000) . 200 Ang. PLAT241_ALERT_2_C Check High Ueq as Compared to Neighbors for Cl2B PLAT301_ALERT_3_C Main Residue Disorder ......................... 18.00 Perc. PLAT340_ALERT_3_C Low Bond Precision on C-C bonds (x 1000) Ang ... 7 PLAT380_ALERT_4_C Check Incorrectly? Oriented X(sp2)-Methyl Moiety C14
Alert level G REFLT03_ALERT_4_G WARNING: Large fraction of Friedel related reflns may be needed to determine absolute structure From the CIF: _diffrn_reflns_theta_max 26.00 From the CIF: _reflns_number_total 1683 Count of symmetry unique reflns 1294 Completeness (_total/calc) 130.06% TEST3: Check Friedels for noncentro structure Estimate of Friedel pairs measured 389 Fraction of Friedel pairs measured 0.301 Are heavy atom types Z>Si present yes
0 ALERT level A = In general: serious problem 3 ALERT level B = Potentially serious problem 5 ALERT level C = Check and explain 1 ALERT level G = General alerts; check 1 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 4 ALERT type 2 Indicator that the structure model may be wrong or deficient 2 ALERT type 3 Indicator that the structure quality may be low 2 ALERT type 4 Improvement, methodology, query or suggestion 0 ALERT type 5 Informative message, check
Data collection: STADI4 (Stoe & Cie, 1987); cell refinement: STADI4; data reduction: REDU4 (Stoe & Cie, 1987); program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997); software used to prepare material for publication: SHELXL97.
C9H8Cl3NO | F(000) = 512 |
Mr = 252.51 | Dx = 1.495 Mg m−3 |
Orthorhombic, P212121 | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: P 2ac 2ab | Cell parameters from 67 reflections |
a = 10.150 (2) Å | θ = 14.1–57.6° |
b = 10.216 (2) Å | µ = 0.78 mm−1 |
c = 10.817 (2) Å | T = 304 K |
V = 1121.7 (4) Å3 | Needle, grey |
Z = 4 | 0.55 × 0.16 × 0.13 mm |
Stoe Stadi4 four-circle diffractometer | 1257 reflections with I > 2σ(I) |
Radiation source: fine-focus sealed tube | Rint = 0.019 |
Graphite monochromator | θmax = 26.0°, θmin = 2.7° |
profile fitted scan 2θ/ω 1/1 | h = −1→12 |
Absorption correction: analytical (Clark & Reid, 1995) | k = −1→12 |
Tmin = 0.675, Tmax = 0.907 | l = −13→2 |
1893 measured reflections | 3 standard reflections every 120 min |
1683 independent reflections | intensity decay: none |
Refinement on F2 | Hydrogen site location: inferred from neighbouring sites |
Least-squares matrix: full | H atoms treated by a mixture of independent and constrained refinement |
R[F2 > 2σ(F2)] = 0.044 | w = 1/[σ2(Fo2) + (0.0528P)2 + 0.4591P] where P = (Fo2 + 2Fc2)/3 |
wR(F2) = 0.131 | (Δ/σ)max = 0.006 |
S = 1.04 | Δρmax = 0.18 e Å−3 |
1683 reflections | Δρmin = −0.24 e Å−3 |
159 parameters | Extinction correction: SHELXL97, Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
2 restraints | Extinction coefficient: 0.011 (3) |
Primary atom site location: structure-invariant direct methods | Absolute structure: (Flack, 1983), 396 Friedel pairs |
Secondary atom site location: difference Fourier map | Absolute structure parameter: −0.19 (14) |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
Cl1B | 0.7851 (8) | 0.7197 (11) | 0.6433 (10) | 0.109 (4) | 0.5 |
Cl1A | 0.7848 (9) | 0.7091 (9) | 0.6326 (7) | 0.075 (2) | 0.5 |
Cl2B | 0.6113 (6) | 0.8712 (5) | 0.5020 (5) | 0.1108 (17) | 0.5 |
Cl2A | 0.6533 (5) | 0.9398 (5) | 0.5373 (6) | 0.1173 (19) | 0.5 |
Cl3B | 0.7423 (5) | 0.9867 (5) | 0.7044 (6) | 0.134 (2) | 0.5 |
Cl3A | 0.7733 (5) | 0.9409 (5) | 0.7775 (5) | 0.1021 (16) | 0.5 |
C4 | 0.6782 (4) | 0.8440 (4) | 0.6620 (5) | 0.0647 (12) | |
C5 | 0.5511 (4) | 0.8003 (4) | 0.7264 (4) | 0.0499 (9) | |
C8 | 0.3575 (4) | 0.8760 (4) | 0.8369 (4) | 0.0487 (10) | |
C9 | 0.2553 (4) | 0.8219 (4) | 0.7706 (5) | 0.0631 (11) | |
H9 | 0.2682 | 0.7955 | 0.6892 | 0.076* | |
C10 | 0.1325 (5) | 0.8068 (5) | 0.8261 (6) | 0.0772 (15) | |
H10 | 0.0626 | 0.7716 | 0.7815 | 0.093* | |
C11 | 0.1151 (5) | 0.8437 (5) | 0.9460 (7) | 0.0821 (16) | |
H11 | 0.0336 | 0.8324 | 0.9838 | 0.099* | |
C12 | 0.2175 (6) | 0.8973 (5) | 1.0105 (5) | 0.0717 (13) | |
H12 | 0.2037 | 0.9229 | 1.092 | 0.086* | |
C13 | 0.3400 (4) | 0.9147 (4) | 0.9593 (4) | 0.0539 (10) | |
C14 | 0.4502 (6) | 0.9774 (5) | 1.0315 (5) | 0.0725 (13) | |
H14A | 0.5278 | 0.9816 | 0.981 | 0.109* | |
H14B | 0.4683 | 0.9263 | 1.104 | 0.109* | |
H14C | 0.4248 | 1.0643 | 1.0555 | 0.109* | |
O6 | 0.5208 (3) | 0.6856 (3) | 0.7256 (3) | 0.0674 (9) | |
N7 | 0.4819 (3) | 0.8955 (3) | 0.7789 (4) | 0.0534 (9) | |
H7 | 0.507 (5) | 0.967 (5) | 0.773 (5) | 0.064* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cl1B | 0.051 (3) | 0.079 (5) | 0.198 (9) | 0.018 (3) | 0.020 (4) | −0.015 (5) |
Cl1A | 0.080 (4) | 0.055 (3) | 0.091 (3) | 0.005 (3) | 0.018 (3) | −0.020 (2) |
Cl2B | 0.127 (4) | 0.125 (4) | 0.080 (2) | 0.010 (3) | 0.030 (3) | 0.033 (3) |
Cl2A | 0.104 (3) | 0.130 (4) | 0.117 (4) | 0.022 (3) | 0.029 (3) | 0.066 (4) |
Cl3B | 0.105 (4) | 0.085 (3) | 0.213 (6) | −0.058 (3) | 0.091 (4) | −0.077 (4) |
Cl3A | 0.0676 (17) | 0.103 (4) | 0.136 (3) | −0.028 (2) | 0.007 (2) | −0.059 (3) |
C4 | 0.066 (2) | 0.043 (2) | 0.085 (3) | −0.001 (2) | 0.022 (2) | −0.011 (2) |
C5 | 0.0547 (19) | 0.039 (2) | 0.056 (2) | −0.0026 (17) | −0.0010 (19) | −0.0032 (19) |
C8 | 0.051 (2) | 0.035 (2) | 0.060 (2) | 0.0052 (16) | 0.0030 (19) | 0.0042 (18) |
C9 | 0.065 (2) | 0.055 (2) | 0.070 (3) | −0.005 (2) | −0.003 (2) | 0.004 (2) |
C10 | 0.056 (2) | 0.065 (3) | 0.111 (4) | −0.005 (2) | −0.007 (3) | 0.009 (3) |
C11 | 0.069 (3) | 0.061 (3) | 0.116 (5) | 0.004 (3) | 0.036 (3) | 0.015 (3) |
C12 | 0.086 (3) | 0.051 (2) | 0.078 (3) | 0.010 (3) | 0.025 (3) | 0.006 (2) |
C13 | 0.061 (2) | 0.038 (2) | 0.064 (3) | 0.0070 (18) | 0.010 (2) | 0.005 (2) |
C14 | 0.095 (3) | 0.059 (3) | 0.064 (3) | 0.006 (3) | −0.007 (3) | −0.008 (2) |
O6 | 0.0702 (17) | 0.0348 (16) | 0.097 (2) | −0.0035 (13) | 0.0144 (18) | −0.0050 (16) |
N7 | 0.0561 (18) | 0.0314 (15) | 0.073 (2) | −0.0050 (15) | 0.0114 (19) | −0.0054 (19) |
Cl1A—C4 | 1.781 (10) | C9—H9 | 0.93 |
Cl2A—C4 | 1.685 (7) | C10—C11 | 1.361 (9) |
Cl3A—C4 | 1.864 (7) | C10—H10 | 0.93 |
Cl1B—C4 | 1.683 (10) | C11—C12 | 1.367 (8) |
Cl2B—C4 | 1.880 (7) | C11—H11 | 0.93 |
Cl3B—C4 | 1.660 (6) | C12—C13 | 1.372 (6) |
C4—C5 | 1.533 (6) | C12—H12 | 0.93 |
C5—O6 | 1.212 (5) | C13—C14 | 1.507 (7) |
C5—N7 | 1.328 (5) | C14—H14A | 0.96 |
C8—C9 | 1.377 (6) | C14—H14B | 0.96 |
C8—C13 | 1.393 (6) | C14—H14C | 0.96 |
C8—N7 | 1.424 (5) | N7—H7 | 0.78 (5) |
C9—C10 | 1.392 (7) | ||
Cl1A—C4—Cl3A | 102.5 (4) | C11—C10—C9 | 119.7 (5) |
Cl2A—C4—Cl3A | 107.8 (4) | C11—C10—H10 | 120.1 |
Cl2A—C4—Cl1A | 113.4 (4) | C12—C11—H11 | 120 |
Cl1B—C4—Cl2B | 103.5 (5) | C11—C12—C13 | 122.3 (5) |
Cl3B—C4—Cl2B | 105.5 (4) | C11—C12—H12 | 118.8 |
C5—C4—Cl3B | 117.4 (4) | C12—C13—C8 | 117.5 (4) |
C5—C4—Cl2A | 114.0 (3) | C12—C13—C14 | 121.2 (4) |
C5—C4—Cl1A | 111.5 (4) | C13—C8—N7 | 119.5 (4) |
C5—C4—Cl3A | 106.6 (3) | C13—C12—H12 | 118.8 |
O6—C5—C4 | 119.5 (4) | C13—C14—H14A | 109.5 |
O6—C5—N7 | 125.2 (4) | C13—C14—H14B | 109.5 |
N7—C5—C4 | 115.2 (3) | H14A—C14—H14B | 109.5 |
C8—C9—C10 | 119.6 (5) | C13—C14—H14C | 109.5 |
C8—C9—H9 | 120.2 | H14A—C14—H14C | 109.5 |
C8—C13—C14 | 121.2 (4) | H14B—C14—H14C | 109.5 |
C9—C8—C13 | 120.9 (4) | C5—N7—C8 | 123.7 (3) |
C9—C8—N7 | 119.6 (4) | C5—N7—H7 | 118 (4) |
C9—C10—H10 | 120.1 | C8—N7—H7 | 118 (4) |
C10—C11—C12 | 119.9 (5) | C5—C4—Cl1B | 112.1 (5) |
C10—C11—H11 | 120 | C5—C4—Cl2B | 99.0 (3) |
C10—C9—H9 | 120.2 | ||
Cl1A—C4—C5—O6 | −16.5 (6) | C8—C9—C10—C11 | −1.1 (7) |
Cl2A—C4—C5—O6 | 113.6 (5) | C9—C10—C11—C12 | 1.1 (8) |
Cl3A—C4—C5—O6 | −127.6 (4) | C10—C11—C12—C13 | −0.7 (8) |
Cl1A—C4—C5—N7 | 163.9 (4) | C11—C12—C13—C8 | 0.3 (7) |
Cl2A—C4—C5—N7 | −66.0 (5) | C11—C12—C13—C14 | 178.4 (5) |
Cl3A—C4—C5—N7 | 52.8 (4) | C9—C8—C13—C12 | −0.3 (6) |
Cl1B—C4—C5—O6 | −20.8 (7) | N7—C8—C13—C12 | 178.3 (4) |
Cl1B—C4—C5—N7 | 159.6 (5) | C9—C8—C13—C14 | −178.3 (4) |
Cl2B—C4—C5—N7 | −91.8 (4) | N7—C8—C13—C14 | 0.3 (6) |
Cl2B—C4—C5—O6 | 87.8 (4) | O6—C5—N7—C8 | −3.3 (7) |
Cl3B—C4—C5—N7 | 21.0 (6) | C4—C5—N7—C8 | 176.2 (4) |
Cl3B—C4—C5—O6 | −159.4 (5) | C9—C8—N7—C5 | −57.0 (6) |
C13—C8—C9—C10 | 0.7 (6) | C13—C8—N7—C5 | 124.4 (4) |
N7—C8—C9—C10 | −177.9 (4) |
D—H···A | D—H | H···A | D···A | D—H···A |
N7—H7···O6i | 0.78 (5) | 2.25 (5) | 2.964 (4) | 153 (5) |
Symmetry code: (i) −x+1, y+1/2, −z+3/2. |
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