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metal-organic compounds
In the title compound, [Ni(C8H5O3)2(H2O)4]·4H2O the Ni atom (site symmetry ) is coordinated by two carboxylate O atoms and four water molecules in an all-trans octahedral geometry. The coordinated and uncoordinated water molecules participate in a three-dimensional network of O—HO hydrogen bonds.
Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536806040815/hb2162sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S1600536806040815/hb2162Isup2.hkl |
CCDC reference: 627677
Key indicators
- Single-crystal X-ray study
- T = 293 K
- Mean (C-C) = 0.003 Å
- R factor = 0.028
- wR factor = 0.080
- Data-to-parameter ratio = 13.9
checkCIF/PLATON results
No syntax errors found
Alert level B PLAT417_ALERT_2_B Short Inter D-H..H-D H22 .. H31 .. 2.09 Ang.
Alert level C PLAT042_ALERT_1_C Calc. and Rep. MoietyFormula Strings Differ .... ? PLAT232_ALERT_2_C Hirshfeld Test Diff (M-X) Ni1 - O1W .. 7.42 su PLAT731_ALERT_1_C Bond Calc 0.85(2), Rep 0.845(9) ...... 2.22 su-Ra O1W -H12 1.555 1.555 PLAT731_ALERT_1_C Bond Calc 0.85(2), Rep 0.855(9) ...... 2.22 su-Ra O2W -H21 1.555 1.555 PLAT731_ALERT_1_C Bond Calc 0.84(2), Rep 0.841(9) ...... 2.22 su-Ra O2W -H22 1.555 1.555 PLAT731_ALERT_1_C Bond Calc 0.83(3), Rep 0.836(10) ...... 3.00 su-Ra O3W -H31 1.555 1.555 PLAT731_ALERT_1_C Bond Calc 0.84(2), Rep 0.844(9) ...... 2.22 su-Ra O4W -H42 1.555 1.555 PLAT735_ALERT_1_C D-H Calc 0.83(3), Rep 0.840(10) ...... 3.00 su-Ra O3W -H31 1.555 1.555 PLAT790_ALERT_4_C Centre of Gravity not Within Unit Cell: Resd. # 2 H2 O
Alert level G FORMU01_ALERT_1_G There is a discrepancy between the atom counts in the _chemical_formula_sum and _chemical_formula_moiety. This is usually due to the moiety formula being in the wrong format. Atom count from _chemical_formula_sum: C16 H26 Ni1 O14 Atom count from _chemical_formula_moiety:C160 H108 Ni20 O684 PLAT199_ALERT_1_G Check the Reported _cell_measurement_temperature 293 K
0 ALERT level A = In general: serious problem 1 ALERT level B = Potentially serious problem 9 ALERT level C = Check and explain 2 ALERT level G = General alerts; check 9 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 2 ALERT type 2 Indicator that the structure model may be wrong or deficient 0 ALERT type 3 Indicator that the structure quality may be low 1 ALERT type 4 Improvement, methodology, query or suggestion 0 ALERT type 5 Informative message, check
Computing details top
Data collection: RAPID-AUTO (Rigaku Corporation, 1998); cell refinement: RAPID-AUTO; data reduction: CrystalStructure (Rigaku/MSC, 2002); program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: X-SEED (Barbour, 2001); software used to prepare material for publication: SHELXL97.
(I) top
Crystal data top
[Ni(C8H5O3)2(H2O)4]·4H2O | Z = 1 |
Mr = 501.08 | F(000) = 262 |
Triclinic, P1 | Dx = 1.563 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 7.124 (4) Å | Cell parameters from 4974 reflections |
b = 7.470 (4) Å | θ = 3.1–27.5° |
c = 11.488 (8) Å | µ = 0.98 mm−1 |
α = 77.10 (3)° | T = 293 K |
β = 78.60 (3)° | Prism, green |
γ = 64.03 (2)° | 0.32 × 0.24 × 0.19 mm |
V = 532.3 (6) Å3 |
Data collection top
Rigaku RAXIS-RAPID IP diffractometer | 2424 independent reflections |
Radiation source: fine-focus sealed tube | 2226 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.016 |
ω scan | θmax = 27.5°, θmin = 3.1° |
Absorption correction: multi-scan ABSCOR (Higashi, 1995) | h = −9→8 |
Tmin = 0.695, Tmax = 0.835 | k = −9→9 |
5303 measured reflections | l = −14→14 |
Refinement top
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.028 | Hydrogen site location: difmap and geom |
wR(F2) = 0.080 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.10 | w = 1/[σ2(Fo2) + (0.0537P)2 + 0.0268P] where P = (Fo2 + 2Fc2)/3 |
2424 reflections | (Δ/σ)max = 0.001 |
174 parameters | Δρmax = 0.34 e Å−3 |
12 restraints | Δρmin = −0.20 e Å−3 |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
x | y | z | Uiso*/Ueq | ||
Ni1 | 0.5000 | 0.5000 | 0.5000 | 0.02825 (11) | |
O1 | 0.45641 (18) | 0.39413 (19) | 0.36228 (10) | 0.0359 (3) | |
O2 | 0.76977 (19) | 0.3173 (2) | 0.25347 (12) | 0.0485 (3) | |
O3 | 0.0882 (2) | 0.2381 (2) | −0.11446 (13) | 0.0518 (4) | |
O1W | 0.79956 (18) | 0.47677 (19) | 0.42522 (12) | 0.0384 (3) | |
O2W | 0.6223 (2) | 0.21284 (19) | 0.59934 (12) | 0.0409 (3) | |
O3W | 1.2053 (3) | 0.1536 (3) | 0.49239 (16) | 0.0606 (4) | |
O4W | 1.0246 (2) | −0.1029 (2) | 0.28328 (14) | 0.0564 (4) | |
C1 | 0.5820 (2) | 0.3395 (2) | 0.26978 (14) | 0.0301 (3) | |
C2 | 0.4993 (2) | 0.3033 (2) | 0.17055 (13) | 0.0281 (3) | |
C3 | 0.2926 (3) | 0.3236 (3) | 0.18304 (14) | 0.0345 (3) | |
H3 | 0.2068 | 0.3532 | 0.2547 | 0.041* | |
C4 | 0.2147 (3) | 0.3000 (3) | 0.08915 (15) | 0.0359 (3) | |
H4 | 0.0770 | 0.3129 | 0.0978 | 0.043* | |
C5 | 0.3425 (3) | 0.2569 (2) | −0.01813 (14) | 0.0319 (3) | |
C6 | 0.5488 (3) | 0.2357 (2) | −0.03069 (14) | 0.0338 (3) | |
H6 | 0.6343 | 0.2066 | −0.1025 | 0.041* | |
C7 | 0.6273 (3) | 0.2580 (2) | 0.06358 (15) | 0.0333 (3) | |
H7 | 0.7658 | 0.2426 | 0.0553 | 0.040* | |
C8 | 0.2624 (3) | 0.2311 (3) | −0.11929 (15) | 0.0394 (4) | |
H8 | 0.3507 | 0.2082 | −0.1908 | 0.047* | |
H11 | 0.812 (4) | 0.428 (3) | 0.3619 (13) | 0.057 (7)* | |
H12 | 0.893 (4) | 0.391 (3) | 0.4686 (19) | 0.085 (9)* | |
H21 | 0.720 (3) | 0.190 (4) | 0.6403 (19) | 0.072 (8)* | |
H22 | 0.661 (4) | 0.119 (3) | 0.559 (2) | 0.085 (9)* | |
H31 | 1.328 (3) | 0.145 (6) | 0.482 (2) | 0.119 (14)* | |
H32 | 1.159 (3) | 0.147 (4) | 0.5663 (11) | 0.065 (8)* | |
H41 | 0.967 (5) | 0.0243 (14) | 0.269 (3) | 0.105 (12)* | |
H42 | 1.001 (4) | −0.151 (3) | 0.2307 (17) | 0.060 (7)* |
Atomic displacement parameters (Å2) top
U11 | U22 | U33 | U12 | U13 | U23 | |
Ni1 | 0.02467 (15) | 0.03378 (16) | 0.02892 (16) | −0.01129 (11) | −0.00468 (10) | −0.01011 (11) |
O1 | 0.0305 (6) | 0.0498 (7) | 0.0325 (6) | −0.0172 (5) | −0.0015 (4) | −0.0167 (5) |
O2 | 0.0306 (6) | 0.0758 (9) | 0.0476 (7) | −0.0226 (6) | 0.0011 (5) | −0.0297 (7) |
O3 | 0.0492 (8) | 0.0590 (8) | 0.0545 (8) | −0.0189 (7) | −0.0171 (6) | −0.0202 (7) |
O1W | 0.0305 (6) | 0.0468 (7) | 0.0420 (7) | −0.0161 (5) | −0.0038 (5) | −0.0146 (6) |
O2W | 0.0419 (7) | 0.0381 (6) | 0.0424 (7) | −0.0125 (5) | −0.0132 (5) | −0.0066 (5) |
O3W | 0.0732 (11) | 0.0589 (9) | 0.0624 (10) | −0.0370 (9) | −0.0151 (8) | −0.0070 (8) |
O4W | 0.0533 (8) | 0.0593 (9) | 0.0596 (9) | −0.0126 (7) | −0.0225 (7) | −0.0236 (8) |
C1 | 0.0285 (7) | 0.0306 (7) | 0.0311 (7) | −0.0104 (6) | −0.0049 (6) | −0.0070 (6) |
C2 | 0.0292 (7) | 0.0271 (7) | 0.0283 (7) | −0.0111 (6) | −0.0041 (6) | −0.0053 (5) |
C3 | 0.0321 (8) | 0.0450 (9) | 0.0285 (7) | −0.0170 (7) | 0.0009 (6) | −0.0113 (7) |
C4 | 0.0313 (8) | 0.0464 (9) | 0.0348 (8) | −0.0185 (7) | −0.0027 (6) | −0.0113 (7) |
C5 | 0.0372 (8) | 0.0294 (7) | 0.0308 (8) | −0.0132 (6) | −0.0058 (6) | −0.0072 (6) |
C6 | 0.0369 (8) | 0.0356 (8) | 0.0284 (7) | −0.0146 (7) | 0.0027 (6) | −0.0104 (6) |
C7 | 0.0304 (8) | 0.0366 (8) | 0.0342 (8) | −0.0144 (7) | −0.0010 (6) | −0.0094 (6) |
C8 | 0.0478 (10) | 0.0373 (8) | 0.0339 (8) | −0.0145 (8) | −0.0080 (7) | −0.0103 (7) |
Geometric parameters (Å, º) top
Ni1—O1 | 2.048 (2) | O4W—H41 | 0.845 (10) |
Ni1—O1i | 2.048 (2) | O4W—H42 | 0.844 (9) |
Ni1—O2wi | 2.080 (2) | C1—C2 | 1.504 (2) |
Ni1—O1w | 2.083 (2) | C2—C7 | 1.389 (2) |
Ni1—O2w | 2.080 (2) | C2—C3 | 1.394 (2) |
Ni1—O1wi | 2.083 (2) | C3—C4 | 1.382 (2) |
C1—O1 | 1.263 (2) | C3—H3 | 0.9300 |
C1—O2 | 1.254 (2) | C4—C5 | 1.389 (2) |
O3—C8 | 1.210 (2) | C4—H4 | 0.9300 |
O1W—H11 | 0.859 (9) | C5—C6 | 1.389 (2) |
O1W—H12 | 0.845 (9) | C5—C8 | 1.473 (2) |
O2W—H21 | 0.855 (9) | C6—C7 | 1.383 (2) |
O2W—H22 | 0.841 (9) | C6—H6 | 0.9300 |
O3W—H31 | 0.836 (10) | C7—H7 | 0.9300 |
O3W—H32 | 0.847 (9) | C8—H8 | 0.9300 |
O1—Ni1—O1i | 180.0 | C7—C2—C3 | 119.75 (14) |
O1—Ni1—O1w | 93.81 (6) | C7—C2—C1 | 119.64 (14) |
O1—Ni1—O1wi | 86.19 (6) | C3—C2—C1 | 120.55 (14) |
O1—Ni1—O2w | 92.37 (7) | C4—C3—C2 | 120.17 (15) |
O1—Ni1—O2wi | 87.63 (7) | C4—C3—H3 | 119.9 |
O1w—Ni1—O1wi | 180.0 | C2—C3—H3 | 119.9 |
O1w—Ni1—O2w | 91.58 (6) | C3—C4—C5 | 119.88 (15) |
O1wi—Ni1—O2w | 88.42 (6) | C3—C4—H4 | 120.1 |
O2w—Ni1—O2wi | 180.0 | C5—C4—H4 | 120.1 |
C1—O1—Ni1 | 127.92 (10) | C4—C5—C6 | 120.07 (14) |
Ni1—O1W—H11 | 99.7 (16) | C4—C5—C8 | 120.71 (15) |
Ni1—O1W—H12 | 112 (2) | C6—C5—C8 | 119.22 (15) |
H11—O1W—H12 | 108.2 (14) | C7—C6—C5 | 120.05 (15) |
Ni1—O2W—H21 | 115.2 (17) | C7—C6—H6 | 120.0 |
Ni1—O2W—H22 | 113.8 (19) | C5—C6—H6 | 120.0 |
H21—O2W—H22 | 109.5 (15) | C6—C7—C2 | 120.06 (15) |
H31—O3W—H32 | 111.2 (16) | C6—C7—H7 | 120.0 |
H41—O4W—H42 | 109.4 (15) | C2—C7—H7 | 120.0 |
O2—C1—O1 | 124.73 (14) | O3—C8—C5 | 123.66 (17) |
O2—C1—C2 | 117.50 (14) | O3—C8—H8 | 118.2 |
O1—C1—C2 | 117.75 (14) | C5—C8—H8 | 118.2 |
O2Wi—Ni1—O1—C1 | 88.22 (14) | C1—C2—C3—C4 | 176.74 (15) |
O2W—Ni1—O1—C1 | −91.78 (14) | C2—C3—C4—C5 | −0.4 (3) |
O1Wi—Ni1—O1—C1 | 179.96 (14) | C3—C4—C5—C6 | 0.6 (2) |
O1W—Ni1—O1—C1 | −0.04 (14) | C3—C4—C5—C8 | 180.00 (15) |
Ni1—O1—C1—O2 | 9.4 (2) | C4—C5—C6—C7 | −0.1 (2) |
Ni1—O1—C1—C2 | −169.04 (10) | C8—C5—C6—C7 | −179.54 (14) |
O2—C1—C2—C7 | −3.5 (2) | C5—C6—C7—C2 | −0.6 (2) |
O1—C1—C2—C7 | 175.14 (14) | C3—C2—C7—C6 | 0.8 (2) |
O2—C1—C2—C3 | 179.45 (16) | C1—C2—C7—C6 | −176.29 (14) |
O1—C1—C2—C3 | −2.0 (2) | C4—C5—C8—O3 | −2.7 (3) |
C7—C2—C3—C4 | −0.4 (2) | C6—C5—C8—O3 | 176.65 (17) |
Symmetry code: (i) −x+1, −y+1, −z+1. |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
O1w—H11···O2 | 0.86 (1) | 1.77 (1) | 2.607 (2) | 163 (2) |
O1w—H12···O3w | 0.85 (1) | 2.18 (2) | 2.953 (3) | 152 (2) |
O2w—H22···O3wii | 0.84 (1) | 2.01 (1) | 2.819 (3) | 162 (3) |
O2w—H21···O4wii | 0.86 (1) | 1.96 (1) | 2.803 (2) | 170 (2) |
O3w—H31···O1iii | 0.84 (1) | 2.45 (3) | 3.037 (2) | 128 (3) |
O3w—H32···O4wii | 0.85 (1) | 2.01 (1) | 2.812 (3) | 158 (2) |
O4w—H41···O2 | 0.85 (1) | 2.01 (1) | 2.836 (3) | 167 (3) |
O4w—H42···O3iv | 0.84 (1) | 1.92 (1) | 2.762 (2) | 173 (2) |
Symmetry codes: (ii) −x+2, −y, −z+1; (iii) x+1, y, z; (iv) −x+1, −y, −z. |
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